ID   RETRO935_AG_LTR repbase; DNA; INV; 350 BP.
CC   RETRO935_AG_LTR DNA
XX
AC   ;
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO935_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; NINJA; RETRO935_AG_I;
KW   RETRO935_AG_LTR.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (African malaria mosquito)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea;
OC   Anopheles
XX
RN   [1]
RP   1-350
RC   [1]  (bases 1 to 350)
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO935_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2:(12) p. 21 (2002)
XX
CC   Related to NINJA from Drosophila simulans. 5 bp target site
CC   duplication.
XX
CC   [1]  Consensus
XX
SQ   Sequence 350 BP; 88 A; 72 C; 93 G; 97 T; 0 other;
     tgtcacttat ggtgacgacg cgatcgttcg aggatcgaca aggagcgtcc gtattttagc        60
     tagcggccgc tagaggtctc ggactggacg ataaacgttc ggactgaacg aaagggatcg       120
     accgagcgtt tgacggatag ccggtgaccg catggactgc gaaatagggc tttctttttg       180
     atcccggacc tgcgtggaag cggacgaatt tttagttttt tcttcactct ctcggctact       240
     aaaattttgt gctgttaaag gcaaaataaa ataatcctga attacttaaa aaagccgttt       300
     gtttggtaaa ttatttatct gcaggccggg cgttgtgcta acgcgcaaca                  350
//
ID   RETRO25_AG_LTR repbase; DNA; INV; 316 BP.
CC   RETRO25_AG_LTR DNA
XX
AC   ;
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO25_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; BEL; DIVER; RETRO25_AG_I;
KW   RETRO25_AG_LTR.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (African malaria mosquito)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea;
OC   Anopheles
XX
RN   [1]
RP   1-316
RC   [1]  (bases 1 to 316)
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO25_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2:(12) p. 8 (2002)
XX
CC   Related to BEL and DIVER from Drosophila melanogaster. 5 bp
CC   target site duplication.
XX
CC   [1]  Consensus
XX
SQ   Sequence 316 BP; 89 A; 73 C; 60 G; 94 T; 0 other;
     tgttacggca agcgtaatgg taacgcgtca cccttagtac gcctagcgta aggtagaggg        60
     cgctttcaag aaatttacct acgtgtaaat tttacttaat cataattcta ttacgcagtg       120
     caaattgctg tagatcggta tcgtgcagct cgaattcccg caagtgcagc tcgaattacc       180
     gcaagtgcag ctcgaattcc cgaattctgc cgtatataag cgagtgtttt tcctgaataa       240
     atttagtcaa gttccagagt tcaaagcaac aacatcgtgt cttcatcatc ttcaaacttc       300
     ctcttcatca ttaaca                                                       316
//
ID   RETRO56_AG_LTR repbase; DNA; INV; 141 BP.
CC   RETRO56_AG_LTR DNA
XX
AC   ;
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO56_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; MAG; RETRO56_AG_I;
KW   RETRO56_AG_LTR.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (African malaria mosquito)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea;
OC   Anopheles
XX
RN   [1]
RP   1-141
RC   [1]  (bases 1 to 141)
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO56_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2:(12) p. 12 (2002)
XX
CC   Related to MAG from Bombyx mori. 5 bp target site duplication.
XX
CC   [1]  Consensus
XX
SQ   Sequence 141 BP; 49 A; 27 C; 26 G; 39 T; 0 other;
     tgttgcatag taacacgcat aacgcagtaa cattgcaaga ctcgatcaga gtacacattg        60
     agtgaataaa gacgattcca ttctgaacta aggaataaag cagttgtgtt tttctcaaga       120
     tatattccct gcgacatatc a                                                 141
//
ID   RETRO937_AG_LTR repbase; DNA; INV; 366 BP.
CC   RETRO937_AG_LTR DNA
XX
AC   ;
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO937_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; NINJA; RETRO937_AG_I;
KW   RETRO937_AG_LTR.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (African malaria mosquito)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea;
OC   Anopheles
XX
RN   [1]
RP   1-366
RC   [1]  (bases 1 to 366)
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO937_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2:(12) p. 22 (2002)
XX
CC   Related to NINJA from Drosophila simulans. 5 bp target site
CC   duplication.
XX
CC   [1]  Consensus
XX
SQ   Sequence 366 BP; 119 A; 74 C; 79 G; 94 T; 0 other;
     tgttattgtt taacacagga aaacatcgaa tgtcagcgca agtgtcaagc agtgacattt        60
     gacccacgtt actgctcgac tgtgggactg ctcgactaac gatgaggatc gcaagcccgc       120
     gaatttgcaa tggtggaaaa gccataaaag ggaaatttgg gaaagcactt tctctttttc       180
     tcgtcatcac cgcggaacca gaagcagtgg aattttttta accactttgt tataagtaaa       240
     tttacagtac caccgttacg tactgcgtta atagaattca ataaagtgaa gttaagagaa       300
     cctaactaac gtcgcgagtg aatcatttcg ggaaaaaaaa tatcaccgga cgttgctaac       360
     gcaaca                                                                  366
//
ID   RETRO23_AG_LTR repbase; DNA; INV; 720 BP.
CC   RETRO23_AG_LTR DNA
XX
AC   ;
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO23_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; RETRO23_AG_I;
KW   RETRO23_AG_LTR.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (African malaria mosquito)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea;
OC   Anopheles
XX
RN   [1]
RP   1-720
RC   [1]  (bases 1 to 720)
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO23_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2:(12) p. 7 (2002)
XX
CC   4 bp target site duplication.
XX
CC   [1]  Consensus
XX
SQ   Sequence 720 BP; 172 A; 112 C; 179 G; 257 T; 0 other;
     tgtaatgtga tgatcgtaca actgtacttc gagtaccgtc gcggtaggtc agtgttttac        60
     tgacatgagc cgaggtggaa taaaacttcg ttcgaagcgg acttttcgac acttgatcgt       120
     ccaggcgatc atagaaacct ttaggaggtt tcccttactg gaaacgttgg agtttagagg       180
     ccttaccttg ggtaggggga cataactaaa ctctttaaat gagaagtcga tagatgtagg       240
     atgggcatag tcctatcctg acagtccgaa cgaatctgac ttgccatgat cggagttggt       300
     tttatttata ctcaaaagaa gttaagggtt tctcacattt ggttccgggt tgtatgttgg       360
     aaagttattg ttttcactca gctagttacg tttgtctttt gttgacaaga acgatggttc       420
     ttgtcactaa gttcctgttt tgggtttaat gcatatactg ttcctgcttt gggttataat       480
     gcataaactg ttcctgctta tgttgtacgt ttcggttggt tctgataagt gtgtcacaat       540
     tgtttttata tgaacggtgt ggcctgagct cttccgggtg tgtatggtat gatctgattt       600
     actgaatgtg ttataatgaa tgtgttacaa tggtgtggtt tggctttcca aagtgtgtta       660
     caatgtgtct atagctgata gtgtgtatta taataagttc tgtatagcag atatgctaca       720
//
ID   RETRO19_AG_LTR repbase; DNA; INV; 404 BP.
CC   RETRO19_AG_LTR DNA
XX
AC   ;
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae gypsy-type long terminal repeat from RETRO19_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; GYPSY superfamily;
KW   RETRO19_AG_I; RETRO19_AG_LTR.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (African malaria mosquito)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea;
OC   Anopheles
XX
RN   [1]
RP   1-404
RC   [1]  (bases 1 to 404)
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO19_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2:(12) p. 4 (2002)
XX
CC   Related to MDG1, TABOR, DM412, STALKER2, and BLOOD retrotransposons
CC   from Drosophila melanogaster. 4 bp target site duplication.
XX
CC   [1]  Consensus
XX
SQ   Sequence 404 BP; 166 A; 40 C; 88 G; 110 T; 0 other;
     tgtggcgcat acacataggc gtaatgaata taattatagt aagctatata gcagaaatta        60
     tagtaagcta tctttatagg aatagttgtg attggtagaa gcgtgttagt ataggttaga       120
     ataggatagc taatacgaaa agataaggat agaataggta gcataggaaa ttaggcataa       180
     gacggaatta aggatacata ggaagtaaat gaattaagct aggattagat agggaaattt       240
     tagtataaat agcgggatag gatttaggat agtcagataa aagttagact tcataagggg       300
     aaactctgtc caattataga gaaaattata gagagtataa ataaaagtta cagttccaac       360
     aaaacacccc tttttcaatt gtacactaaa agtgatatac caca                        404
//
