CC * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
CC                                                               *
CC   REPBASE UPDATE                                              *
CC   (C) 1997-2003  Genetic Information Research Institute       *
CC   All rights reserved                                         *
CC                                                               *
CC   A REFERENCE COLLECTION OF PLANT REPETITIVE ELEMENTS         *
CC   (AN APPENDIX)                                               *
CC                                                               *
CC * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
XX
ID   OSTANR89  repbase; DNA; PLN; 404 BP.
CC   OSTANR89 DNA
XX
AC   X55429;
XX
DT   11-NOV-1996 (Rel. 2.2, Created)
DT   11-NOV-1996 (Rel. 2.2, Last updated, Version 1)
XX
DE   Rice tandem repeat units R8-R9.
XX
KW   Tandem repetitive sequence.
XX
OS   Oryza sativa (rice)
CC   rice
OC   Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
OC   Commelinidae; Cyperales; Poaceae.
XX
RN   [1]
RP   1-404
RC   [1]  (bases 1 to 404)
RA   Ohtsubo H.;
RT   "Direct Submission";
RL   Submitted (02-NOV-1990) Ohtsubo H., Institute of Applied
RL   Microbiology, University of Tokyo, 1-1-1, Yayoi, Bunkyo-Ku, Tokyo,
XX
RN   [2]
RP   1-404
RC   [2]  (bases 1 to 404)
RA   Ohtsubo H., Umeda M., Ohtsubo E.;
RT   "Organization of DNA sequences highly repeated in tandem in rice
RT   genome";
RL   Unpublished
XX
RN   [3]
RP   1-404
RC   [3]  (bases 1 to 404)
RA   Ohtsubo H., Umeda M., Ohtsubo E.;
RT   "Organization of DNA sequences highly repeated in tandem in rice
RT   genome";
RL   Jpn. J. Genet. 66, 241-254 (1991)
XX
CC   repeat_unit     1..134
CC                   note="R8"
CC   repeat_unit     135..404
CC                   note="R9"
XX
DR   GENBANK; X55429; 79.0.
CC   Positions       1     404  Accession No X55429        GenBank (rel. 79.0)
XX
SQ   Sequence 404 BP; 108 A; 75 C; 115 G; 106 T; 0 other;
     ccctagagat actaaatttg gagaggtgga cctccaaaga tttttctaga aatgacttac        60
     cataggccac gaagcagcgg ttgtttcggc gaaacgtcga atatctgagg gtccacaact       120
     ggttttcaac gaggtggtta gtataggaat ggcacatagg acgttagggt ggatagttta       180
     gatgatgtcg gtgtcaggcg cgtcgactaa ccgcgccgtt aaggtaggct ggcgggtgcg       240
     acaccgcgta atgtagatgg agaattctgt gcgaaattaa aacttagata acgttgcctt       300
     ccggtcatgg aattgagcta ggtttttttg atggctgcag aatcacggga ctcccactag       360
     agatactaca tttggagagg tggacctcca aagatttttc taga                        404
//
ID   TY3LTR_ZM repbase; DNA; PLN; 482 BP.
CC   TY3LTR_ZM DNA
XX
AC   U03953;
XX
DT   11-NOV-1996 (Rel. 2.2, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Zea mays mays clone mays53 retrotransposon, partial LTR sequence.
XX
KW   LTR, retrotransposon; ZMTY3LTR.
XX
OS   Zea mays (maize)
CC   maize
OC   Eucaryotae; Embryophyta; Magnoliophyta; Liliopsida; Cyperales;
OC   Poaceae; Zea.
XX
RN   [1]
RP   1-482
RC   [1]  (bases 1 to 482)
RA   Purugganan M.D., Wessler S.R.;
RT   "Molecular Evolution of a Plant Ty3/gypsy-like Retrotransposon";
RL   Unpublished
XX
RN   [2]
RP   1-482
RC   [2]  (bases 1 to 482)
RA   Purugganan M.D.;
RT   "Direct Submission";
RL   Submitted (03-DEC-1993) Michael D. Purugganan, Biology, University
RL   of California at San Diego, 9500 Gilman Drive, La Jolla, CA 92093,
RL   USA
XX
DR   GENBANK; U03953; 81.0.
CC   Positions       1     482  Accession No U03953        GenBank (rel. 81.0)
XX
SQ   Sequence 482 BP; 119 A; 115 C; 131 G; 117 T; 0 other;
     gaaggagaat gccgggaaag aagaagagaa ggctggcgtt caaagaatgg gccgcagaat        60
     tagaaggccg aatccgcgag tttcaggagc tgaatgggtg aactagttgt gggctggtgg       120
     tcgtattggg ccaaattggc ttgtaagacg ttagtagtat aaactgaata atgaagacag       180
     agtgaaggga gaagaaatta atcccattca gacttccact tcttcgtttc ttgcctgctc       240
     ttccgatatc cttcctgttc ctcttcttct tcgtcggcgg cgagcgtcat cggacgacca       300
     gttcgttgac aattggtatc ggcatccaag ttccctgcgg cgcctccgta tttcacccgt       360
     cgcgcgagga tggcgggcgc agcagacccc agtgttgcag cggctttgga tgcgcaatcc       420
     aaatccatcg acatccagtc caggactctt gcgacgcaat caaaaattct tcaacagtta       480
     tc                                                                      482
//
ID   ATREP     repbase; DNA; PLN; 3299 BP.
CC   ATREP DNA
XX
AC   L12220;
XX
DT   11-NOV-1996 (Rel. 2.2, Created)
DT   11-NOV-1996 (Rel. 2.2, Last updated, Version 1)
XX
DE   Arabidopsis thaliana DNA sequence, complete transposon.
XX
KW   endogenous transposon.
XX
OS   Arabidopsis thaliana
CC   Arabidopsis thaliana (strain Landsberg erecta) DNA.
OC   Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
OC   Dilleniidae; Capparales; Brassicaceae.
XX
RN   [1]
RP   1-3299
RC   [1]  (bases 1 to 3299)
RA   Tsay Y.-F., Frank M.J., Page T., Dean C., Crawford N.M.;
RT   "Identification of a mobile endogenous transposon in arabidopsis
RT   thaliana";
RL   Science 260, 342-344 (1993)
XX
DR   GENBANK; L12220; 81.0.
CC   Positions       1    3299  Accession No L12220        GenBank (rel. 81.0)
XX
SQ   Sequence 3299 BP; 1024 A; 530 C; 666 G; 1079 T; 0 other;
     caatgttttc acgcccgacc cgaaccgccc ggtccaaccg gttaaaccac gacccgagca        60
     cttctccggt ttgggtttag tgctaaaacc cactatctat aaaaccaaaa aaacccataa       120
     aaacccgcta ttaacccacg acccattgaa ccggttgaac cgactgggtg tgggttttaa       180
     aaactatagt tgattttgga acgaatatag ggtttttgga acgaatatag ggctttttca       240
     tagttcataa tttcttctca aacggcgact caatctctcg tctacactag ccaaacaaac       300
     cagttagttt ttctatctct cgttttaagt ttgaaaatcc tatttgtctt tatttgtgag       360
     catcatgatc attttatatt gtatattgat atagtgattt ctatactctc gtggcctctt       420
     tgtcttggct ccactgaatc aaatataata ttcaaagtgt ttttgcatca aaataataat       480
     tcagcttcat gtttgatgtg catgtctcac agatatttgt ttgttttttt gtgtgaattt       540
     aataggtaat ggaaacagaa cacgatgaaa attatgaaga tatagctgct gcaaaccgtt       600
     caatccgagg aaaaagtgat attgcttggt cctatgtaat tcaatcaaaa gacgaaaaag       660
     gaaaaacggt tttggaatgt gcattttgtc ataaaaaaaa aagaggaggt ggaattaata       720
     ggatgaaaca ccatcttgct ggcgtgaaag ggaatacaga tgcatgtttg aagatttctg       780
     cagatattag atttaagata gtgaacgcat tgaaagaagc tgagaacaag aagaagcaaa       840
     atattgtttt ggatgatacg aacttagacg gtccagaaat tgaagatgtt gatggagatg       900
     atatccgagt tgatgttcgg ccaagtcaaa agaggaagaa acaaggtatt gatctacatg       960
     attattttaa aagaggtgtg catgatcaga cccaaccttc tataaaagca tgcatgcaaa      1020
     gcaaagagag gaatacatgc tgtggacatg tctgttgcat tgtggtttta tgacgcttgt      1080
     attccgatga atgcggtgaa ttctccactt ttcagcctat gatgagtatg gtagcaagta      1140
     tgggacatgg atatgtgggt ccttcatacc atgctctgcg tgttggattg ttgcgtgatg      1200
     ctaagttgca agtttctttg atcattgata agtttaaaag tagttgggct agtactggat      1260
     gtactcttat ggcagatgga tggaaggaca caagacaaag accactgatt aacttcttag      1320
     tttattgtcc caagggaatt acatttctta agtcagttga tgcttcagat atctatgcaa      1380
     gtgctgagaa tttatgcaac ttgtttgctg aacttgtggg aataattggt tcagaaaata      1440
     ttgttcattt tgtgactgat agtgcaccca actacaaagc tgctggaaag cttcttgttg      1500
     aaaagtttcc caccattgct tggtctcctt gttcagctca ctgtatcaat cttattttgg      1560
     aagatgtggc aaaactaccg catgttcacc atatagtgcg ccgtatgtct aaggtaacca      1620
     tttttgtttt acaaccataa gccggcttta aattgggtga gaaaaagatc gggttggaga      1680
     gagatcattc gtcctggaga aacacgtttt gctacaactt tctcatagct ctacaaagtc      1740
     tctatcaaca taaagaagat ctacaagctt tggttacaag tgcagatccc gaactcaagc      1800
     agcttttcaa aacatctaaa gcaaaagtag ctaaatcggt tatcttggat gagcgaatgt      1860
     ggaatgactg cttgataatt gtcaaggtta tgactcctat catccgtttg ttacgtattt      1920
     gtgatgctga tgagaagcct tctttgccat atgtgtatga agggatgtac cgagcaagat      1980
     taggaattaa aaatattttc caagaaaaag aaaccctcta caagccctat acaaacatca      2040
     ttgatagaag atgggatcgt atgttgcgcc acgatcttca tgctgcagcg tactatttaa      2100
     acccggcttt catgtatgat caacctacat tttgtgagaa gcctgaggtt atgagtgggt      2160
     tgatgaactt atttgagaag caaaaaaatg acagcaaaac aaaacttttt caagaactta      2220
     gggtgtatag agaacgtgaa ggaagttttt ctcttgatat ggctttaact tgcagcaaaa      2280
     cctctcagcc aggtaaatta ttaaacttga gttaaacttg cattttatta tctatatata      2340
     taatataatt ttatttctat ttagatgaat ggtggagata ttttggtcat gacgctccta      2400
     atttgcaaaa gatggcaata cgaattctta gtcaaaccgc ttcttcatct ggatgtgagc      2460
     gcaattggtg tgtatttgag cggattcata ccaagaagcg gaatagacta gagcatcaac      2520
     gacttaacga tctcgtcttt gttcactaca atttacgttt gcaacatagg tgattatcat      2580
     tattattttt tgtttcttaa tttagcttag tttataacaa gttccatgtt tttaatgtac      2640
     aggtcaaaaa gaaaaagatc atatgatcct gttgactacg aatctattga taagacagag      2700
     ttttgggtcg ttgaagaaga agaagcaggt gagcttgaat atgatgaatt agagaatgct      2760
     cttgctgagg aatatcccaa agatcttgaa gacacaaatc ctgaaacatc gaatggtatc      2820
     ttaaattatt gattaaactt ttcgaattga cttttagtta tagataatat gttgactaac      2880
     taaacgatat gtctttgatg ttttagattt tgatgaagac ttcacattgc cgcctgaaga      2940
     ggatgtatgg aatgatgagg aagacaatcg agattagttg ttttgaattt gcgatgtttt      3000
     attactttat ttctgttatt gacttattgg tgatctacta gacatattgt tattttagta      3060
     ttttaaaggt tttatggatt taaatttttt aaactttatg tattgttata cttcttattg      3120
     ttattaaaca tggtattatt attattttta tatataagtt atataacata aactatataa      3180
     tctctatata tatcaaatgc attaaatcag ttgacccgtg gtctaacccg gttgacccaa      3240
     tgacccggtg acccagaagg tagtccggtt cactgtccgg gtcgggcgtg aaaacattg       3299
//
ID   ATR1      repbase; DNA; PLN; 637 BP.
CC   ATR1 DNA
XX
AC   ;
XX
DT   21-JAN-1999 (Rel. 3.1, Created)
DT   21-JAN-1999 (Rel. 3.1, Last updated, Version 1)
XX
DE   An AT-rich repetitive sequence (a consensus).
XX
KW   ATR1.
XX
OS   Arabidopsis thaliana (consensus)
CC   consensus
OC   Eukaryota; Viridiplantae; Charophyta/Embryophyta group;
OC   Embryophyta; Tracheophyta; seed plants; Magnoliophyta;
OC   eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-637
RC   [1]  (bases 1 to 89840)
RA   Rounsley S.D., Kaul S., Lin X., Ketchum K.A., Crosby M.L.,
RA   Brandon R.C., Sykes S.M., Mason T.M., Kerlavage A.R., Adams M.D.,
RA   Somerville C.R., Venter J.C.;
RT   "Arabidopsis thaliana chromosome II BAC F26C24 genomic sequence";
RL   Unpublished
XX
RN   [2]
RP   1-637
RC   [2]  (bases 1 to 637)
RA   Jurka J., Ma J.
RT   ;
RL   Direct submission (January 1999)
XX
CC   Possible DNA transposon.
XX
CC   [2] (Consensus)
XX
SQ   Sequence 637 BP; 277 A; 59 C; 55 G; 244 T; 2 other;
     atktaaraat tattctaagt tagatttatt tagttctgat gtaatctttg ataaaaatta        60
     tagtataaga ttaataatcc tactatatta tttgggaagt acattttaaa tgtaacctta       120
     atttttgtaa gtaattacat aggtatgcca ttagaaataa aattttaaag agtaaattaa       180
     tttatctctt taaggattaa aaagtcaaat actaatttaa ttaattaaat ttaattaaaa       240
     aacgaaatac attattaatt tccaaaaata ataaccaatc aaaatcaaca tataagattt       300
     gatatctaaa ttttaattaa tttaatttaa ttagaaaaac gaaatacatt attaatttcc       360
     aaaaaagtaa ccaattaaaa tcaacaaatt agatttgata tctaaattat catattaatt       420
     ttttattaat tattatagtt cacttctcat ctttatatga ttctattttt gcgaaaaaat       480
     aatatcatca ttataaaaaa ataattagag ttttttcgca tatgccataa tttgaatttt       540
     taaaaacgaa tataaactgt tcaatacatg aaaaaatatt ataacgggtg aaaaatagat       600
     ttaagaaaac tttctactga gtaacgggtc ataattt                                637
//
ID   TAT1_ATH  repbase; DNA; PLN; 723 BP.
CC   TAT1_ATH DNA
XX
AC   M55144;
XX
DT   11-NOV-1996 (Rel. 2.2, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   A.thaliana Tat1 isolate transposon-like element DNA.
XX
KW   S-adenosylmethionine synthetase; transposon-like element; ATHTAT1.
XX
OS   Arabidopsis thaliana
CC   Arabidopsis thaliana DNA.
OC   Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
OC   Dilleniidae; Capparales; Brassicaceae.
XX
RN   [1]
RP   1-723
RC   [1]  (bases 1 to 723)
RA   Peleman J., Cottyn B., Van Camp W., Van Montagu M.M., Inze D.;
RT   "Transient occurrence of extrachromosomal DNA of an Arabidopsis
RT   thaliana transposon-like element, Tat1";
RL   Proc. Natl. Acad. Sci. U.S.A. 88, 3618-3622 (1991)
XX
DR   GENBANK; M55144; 81.0.
CC   Positions       1     723  Accession No M55144        GenBank (rel. 81.0)
XX
SQ   Sequence 723 BP; 227 A; 155 C; 127 G; 214 T; 0 other;
     ctgcagtaac agagtatttt cttccttttc aagtcccaag aggtcaaaac agagtatcat        60
     cgttgtggat gtcggattcg gtccacttcg gactaatccg cattcaatgg gcttcaaggt       120
     gaattgggcc caattcacag cccagcgtga gcctggccgt ttaaagaata atccgacatt       180
     aatacagaaa cggaaggatc acgacttaaa ccacgcatta aagtcccgag ttgaagattc       240
     gtaacgtacg acgttaataa cgcgagatcc acagcgtgaa gtcggcaagt attttaatac       300
     gtttgattcg atgtattgag tataaatatg agtcgatgac atttgtaaag gggacggtta       360
     agaatacact aatactatac acaaaattaa aagacgcttt cttcttggtt cgattcgatt       420
     attgttcgtt taacaagacc aaagatcccc gtaaaaacaa ccacaagatt ctaattgcgg       480
     attccgacat ccacaatcgt catctatcat ttttatgatt cttctataca ttttatacta       540
     aaattcaaaa agaaaaacta accatgtaca tctctgcaat ttcatatcta gtaccagaca       600
     agagttaggg aaatgtgatc tttggcaaat tgtcatgatc cgcttgatgg cacttcttca       660
     agattctcga actctcttac gatctgcttt atatcatcct cactaatcct cccactttct       720
     cta                                                                     723
//
ID   RE1       repbase; DNA; PLN; 922 BP.
CC   RE1 DNA
XX
AC   ;
XX
DT   23-FEB-1999 (Rel. 3.2, Created)
DT   23-FEB-1999 (Rel. 3.2, Last updated, Version 1)
XX
DE   Arabidopsis thaliana retroelement - a consensus.
XX
KW   RE1, reverse transcriptase.
XX
OS   Arabidopsis thaliana (consensus)
CC   consensus
OC   Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
OC   Dilleniidae; Capparales; Brassicaceae.
XX
RN   [1]
RP   1-922
RC   [1] (bases 1 to 922)
RA   Jurka J.
RT   ;
RL   Direct submission (February 1999)
XX
CC   Similarity reverse transcriptase and LTR retroelement
CC   has been identified; detailed classification not available.
CC
CC   RE1 SEQUENCE WAS DELETED SINCE IT DOES NOT REPRESENT REAL OBJECTS
CC   in Arabidopsis thaliana genome.
XX
CC   [1] (Consensus)
XX
SQ   Sequence 922 BP; 236 A; 162 C; 153 G; 305 T; 66 other;
     gataatagac tagagttggt ttgtaatctt tgatttcggt taagtgtaaa ccaaacatta        60
     aaccgagata ctctatcata taaagagtat ctgtgtaaca gaatcattaa gttgaataac       120
     adaatatttt catcttcttc gattctctct gttgctatta tggtatcaga gyratggatc       180
     wcraagatyc rtccgattca acctaawctc tgwgtwtctt cragytyttg gatcttccra       240
     wctygttgat tcttykyttc ttcrttcwat ttctggaaat ttcagttgtt tmraggttct       300
     tykttgrtct tgcgatggtt kccgtwgaka aattgcggcg tcgtactaga agatcgagca       360
     aaamttcagc tgagaaaact ccagatcgtg ttcaarcttc accrrwtcca ccgattycac       420
     ctccgwttca acaaaatytc aaywmaarac catcgatsta tcctttwcca cagttcgayt       480
     tctcggatgc tcantattcg ccnttcgcgc tctcaaatgg tgatcatcca ggtttwactc       540
     ttgtttctca tattcttgat ggaactaatt atgayanttg gacgatagcg atgagtatta       600
     gtttagatgc taagaataag attggttttg ttgatggatc ttttccaaga cctsctgatg       660
     atgatcctan ttttagaaty tggtstagat gcaayagtat ggtkaaatct tggattctga       720
     attctgtrtc taaggagatc tataanagca ttcttgtatt taatgatgct gcagaaatct       780
     ggaawgatct gtatactcga tttcacatna ctaatctccc tcggacntat aagctgactc       840
     agcagattca stctcttcad caaggaacwa tgtctctttc tgattactat actnckttaa       900
     agactctttg ggatganttg ga                                                922
//
ID   ATR1      repbase; DNA; PLN; 2099 BP.
CC   ATR1 DNA
XX
AC   ;
XX
DT   21-JAN-1999 (Rel. 3.1, Created)
DT   21-JAN-1999 (Rel. 3.1, Last updated, Version 1)
XX
DE   An AT-rich repetitive sequence - a consensus.
XX
KW   ATR1.
XX
OS   Arabidopsis thaliana (consensus)
CC   consensus
OC   Eukaryota; Viridiplantae; Charophyta/Embryophyta group;
OC   Embryophyta; Tracheophyta; seed plants; Magnoliophyta;
OC   eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-2099
RC   [1]  (bases 1 to 89840)
RA   Rounsley S.D., Kaul S., Lin X., Ketchum K.A., Crosby M.L.,
RA   Brandon R.C., Sykes S.M., Mason T.M., Kerlavage A.R., Adams M.D.,
RA   Somerville C.R., Venter J.C.;
RT   "Arabidopsis thaliana chromosome II BAC F26C24 genomic sequence";
RL   Unpublished
XX
RN   [2]
RP   1-2099
RC   [2] (bases 1-2099)
RA   Parnell L.;
RT   "ATR0053 repeat in CSHL AtRepBase";
RL   Direct submission (October, 1997)
XX
RN   [3]
RP   1-2099
RC   [3]  (bases 1 to 561)
RA   Jurka J., Ma J.
RT   ;
RL   Direct submission (January 1999)
XX
RN   [4]
RP   1-2099
RC   [4]  (bases 1 to 2099)
RA   Kapitonov V.
RT   ;
RL   Direct submission (February 1999)
XX
CC   ATR1 individual sequence reported by [3] includes also
CC   491 bp-long 5'-terminus that is in fact not a part of ATR1.
CC   Individual copies of ATR1 are ~97% identical to the ATR1 consensus
CC   sequence. The nature of the repeat is unknown. Target sites are not
CC   well determined since ATR1 copies are flanked by (AT)-rich sequences.
CC   An existence of several ATR1 subfamilies determined by multiple 
CC   diagnostic positions indicates that ATR1 can be a retroelement.
CC   At the same time, multiple copies of ATR1 have internal deletions
CC   typical for DNA transposons. 
CC   ATR1 shares common structural features with ATR2 and ATR3 elements;
CC   all these elements have conservative termini: 5'-ATC and ATCTAGT-3'.
CC   ATR1 portion (position 700-900) is conservative since it is 
CC   present in several ~75% similar copies in ATR2 (1300-1400; 1600-1900) 
CC   and ATR3 (930-1300; 1360-1580; 1705-1921; 1981-2081; 2113-2270; 
CC   2272-2380).
XX
CC   [4] (Consensus)
XX
SQ   Sequence 2099 BP; 870 A; 234 C; 225 G; 770 T; 0 other;
     atcctactat attatttggg aagtacattt taaatgtaac cttaattttt gtaagtaatt        60
     acataggtat gccattagaa ataaaatttt aaagagtaaa ttaatttatc tctttaagga       120
     ttaaaaagtc aaatactaat ttaattaatt aaatttaatt aaaaaacgaa atacattatt       180
     aatttccaaa aataataacc aatcaaaatc aacatataag atttgatatc taaattttaa       240
     ttaatttaat ttaattagaa aaacgaaata cattattaat ttccaaaaaa gtaaccaatt       300
     aaaatcaaca aattagattt gatatctaaa ttatcatatt aattttttat taattattat       360
     agttcacttc tcatctttat atgattctat ttttgcgaaa aaataatatc atcattataa       420
     aaaaataatt agagtttttt cgcatatgcc ataatttgaa tttttaaaaa cgaatataaa       480
     ctgttcaata catgaaaaaa tattataacg ggtgaaaaat agatttaaga aaactttcta       540
     ctgagtaacg ggtcataatt tgaaatattt atattcaatt tcatacatat tatattgaaa       600
     atttataatc ttatatacta caataattaa taacatatta gattttttta tgtgtatgat       660
     gtgattcaat ttttaataca agctggaaaa tcctagaatt gacgggttta gatcgatatt       720
     aatacaagat ggtatactac aggtgaaact cttaaattaa caatcaaact acaagtgtat       780
     aatcttaaac actaaacaat atagataata tcaacaaaac atatacaact cacagtttac       840
     tatacattta aaatcaaata aaataatatc atatattttt aaatcatctt tacaataaaa       900
     gtttttagtt taactaaaat ataagcctac ctgcggtata ctgcaggtta atatctagat       960
     tatagggctt attggatcta aagacgggtc atcaaagatt tcctaaactg aagcaaaata      1020
     tactgaatat tcaaatatct atctgttacc aaattataaa caaataagtt cgtaaaacaa      1080
     tttaatattt tatatacgaa atcaattaaa tcttaatcac ataaaaatta gcacaaaaaa      1140
     aagtattcaa caattaaaaa attatcaaat ctctgtgtta tataagtttt gatactatat      1200
     tcgaataaag tgtaatatac cttttcaatt tgtattcttt aactaattta agctaactaa      1260
     tatatttgct aatcttatac ctatcaaaac cgactatcgt ttcttatctc tatagtattt      1320
     ttgcaagact tttttggtgg atttggataa aagtgcattc gggtcatatg gtacattccc      1380
     ctattaaata aatatggtgc actcctatgt tattagctaa aatgtttaga ttataattca      1440
     gagtcatatc attaataaaa ttaatattaa taaaataaat ggctttttgg caagacggat      1500
     ttggagggac gggtttttga atcaacatta ataaaaaagt aaaatataat taatccaccg      1560
     tttcaatacg ggttaaatct ttaatttatt attttttaag accactaata ttaaacatat      1620
     caaatcatcc taatttagaa aagattatat aaaaccaaaa atgttatgtg gtatgtataa      1680
     tgttactata tataaaatta aactataaaa tataaatgta ttagagaatg atacaatttg      1740
     caaaactttt atatataaaa aataattctt aaattttaaa aattactact ttaaaaaaaa      1800
     aatcacggga cgggtaaaga aattacagaa cgggttttat tttggaattg ggttatatgg      1860
     tggatgtatt tgaatcaata tttataaaat tttaaaatat tattaatatg ctgttttaat      1920
     aggggttaaa acttcagttt tttaacaatt gtctcatgga ttcgtggtat agcgttactt      1980
     aataacaatt ataaactgta aaatataaat attttataaa aataaaattt gcaagtttta      2040
     atatatatta cttttaaaaa ataaatcgtc ccgcggtata ccgcgggtta aaatctagt       2099
//
ID   ATREP1    repbase; DNA; PLN; 890 BP.
CC   ATREP1 DNA
XX
AC   ;
XX
DT   16-FEB-1999 (Rel. 3.1, Created)
DT   16-FEB-1999 (Rel. 3.1, Last updated, Version 1)
XX
DE   ATREP1 repeat - a consensus.
XX
KW   non-classified repeat; ATREP2; ATREP1.
XX
OS   Arabidopsis thaliana (consensus)
CC   consensus
OC   Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
OC   Dilleniidae; Capparales; Brassicaceae.
XX
RN   [1]
RP   1-890
RC   [1]  (bases 177 to 890)
RA   Kaplan N., Johnson D., Schutz K., Gnoj L., Hoffman J., Till S.,
RA   de la Bastide M., Granat S., Hameed A., Gottesman T., Hasegawa A.,
RA   Shohdy N., Parnell L., Dedhia N., Johnson A.F., Lodhi M.,
RA   Martienssen R., Chen E.Y., Wilson R., McCombie W.R.
RT   ;
RL   Direct submission to GenBank; AC002330 (1997)
XX
RN   [2]
RP   1-890
RC   [2]  (bases 1 to 890)
RA   Kapitonov V., Jurka J.
RT   ;
RL   Direct submission (February 1999)
XX
CC   ATREP1's individual copies are 94% identical to the consensus sequence. 
CC   Multiple diagnostic positions indicate the existence of several ATREP1 
CC   subfamilies.
CC   It is possible that ATREP1 has preferentially been inserted at ACTAGAT
CC   target-site forming 5 bp-long duplications. 
XX
CC   [2] (Consensus)
XX
SQ   Sequence 890 BP; 339 A; 89 C; 110 G; 350 T; 2 other;
     actagatttt aacccgcggt acaccgcgga gacaatttat tttttaaagt tagtatatat        60
     aaaaatttgc aaattgtatc tatctataaa atatttttat tttatagttt acaattgtta       120
     ttaagtaacg tcctgccaaa cccgtcccgc caaacccgtc ccgaaaaaaa accatttatt       180
     ttattaatgt tgatcttatt tatgatatgt ttatgaatca ttgtctaaat attttagtcg       240
     atgcgggacg ttgaacccac acatttttcg ccaattggtt aatatatgtt catttttaaa       300
     atttcgaatc acaaaatatg acggawttaa awttgagatt tttttaaact ctatatatta       360
     tataatgatg ttaaaaattt ttgatatatt aaacttttta taagtttaaa tattaataat       420
     gttttataaa gtttaaatat ataaataata atatttaaaa aattaatatt ttttgccttt       480
     taggtaatga cataataact ctaaaagcaa ggatttagaa gatttaaatc tttaattaaa       540
     tattttcatt cctaaataat taatgtcagt agcatgacat tgtaaataag ttcaaataca       600
     tgatttattt atttaaacaa aaaacgttta gtaagaataa tatttattta aacaaaaaac       660
     tttgttttaa aatattgtta acaaaatacg tttatgctaa ttttaaggga ttgatgtgaa       720
     gtttgtttgg attaaatttg attgataatg tgattgacaa tttaaattaa gaatttaaag       780
     taaaattaat tattttggaa aaaagattta atgctaatgg cattgggttg taaataagtc       840
     caactctagg atttatttgc taaaatggct gcaaaaatgt atatatagat                  890
//
ID   ATREP2    repbase; DNA; PLN; 566 BP.
CC   ATREP2 DNA
XX
AC   ;
XX
DT   16-FEB-1999 (Rel. 3.1, Created)
DT   16-FEB-1999 (Rel. 3.1, Last updated, Version 1)
XX
DE   ATREP2 repeat - a consensus.
XX
KW   non-classified repeat; ATREP2.
XX
OS   Arabidopsis thaliana (consensus)
CC   consensus
OC   Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
OC   Dilleniidae; Capparales; Brassicaceae.
XX
RN   [1]
RP   1-566
RC   [1]  (bases 1 to 566)
RA   Kapitonov V., Jurka J.
RT   ;
RL   Direct submission (February, 1999)
XX
CC   ATREP2's individual copies are 94% identical to the consensus sequence. 
CC   Multiple diagnostic positions indicate the existence of several ATREP2 
CC   subfamilies.
CC   It is possible that ATREP2 has been preferentially inserted at ACTAGAT
CC   target-site forming 5 bp-long duplications. ATREP2 and ATREP1 share
CC   almost identical terminal portions (236 bp-long 5'-terminus and
CC   70 bp-long 3'-ternimus). 
XX
CC   [1] (Consensus)
XX
SQ   Sequence 566 BP; 202 A; 67 C; 79 G; 216 T; 2 other;
     actagatttt aacccgcggt ataccgcgga aacaatttat tttttaaagt tagtatatat        60
     aaaagtttgc aaattgtatc tatctataaa atatttttat tttatagttt acaattgtta       120
     ttaagtaacg tcctgccaaa cccgtcccgc caacccgtcc cgtaaaaaaa actcatttat       180
     tttattaatg ttgatcttat ttatgatatg tttatgaaty attgtctaaa tattttgtaa       240
     ttttgtagta attaaatgct atcaaatatc tctgcggttt gatgattata atcgaattgt       300
     tatagtcatg gagaaaarca atatcaaaaa tgataatttt gtagtaatta aatgatatta       360
     aatattttgg aagttttatt ttagtaacta atcgtgtagt taatgtggag agattttggg       420
     aagattgtta aatgtcaaat atttaattcg aagattttct ttctaattat caaaaacaaa       480
     tattaaaatc cagtggcagc cattgtaaat aagtcccaac tacaggattt atttcacaaa       540
     atggctgcaa aaatgtatat atagat                                            566
//
ID   ATR2      repbase; DNA; PLN; 2242 BP.
CC   ATR2 DNA
XX
AC   ;
XX
DT   24-FEB-1999 (Rel. 3.2, Created)
DT   24-FEB-1999 (Rel. 3.2, Last updated, Version 1)
XX
DE   An AT-rich repetitive sequence - a consensus.
XX
KW   ATR1; ATR3; ATR2.
XX
OS   Arabidopsis thaliana (consensus)
CC   consensus
OC   Eukaryota; Viridiplantae; Charophyta/Embryophyta group;
OC   Embryophyta; Tracheophyta; seed plants; Magnoliophyta;
OC   eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-2242
RC   [1]  (bases 1 to 2242)
RA   Kapitonov V., Jurka J.
RT   ;
RL   Direct submission (February 1999)
XX
CC   Individual copies of ATR2 are ~94% identical to the ATR2 consensus
CC   sequence. The nature of the repeat is unknown. Target sites are not
CC   well determined since ATR2 copies are flanked by (AT)-rich sequences.
CC   An existence of several ATR2 subfamilies determined by multiple 
CC   diagnostic positions indicates that ATR2 can be a retroelement.
CC   At the same time, multiple copies of ATR2 have internal deletions
CC   typical for DNA transposons. 
CC   ATR2 shares common structural features with ATR1 and ATR3 elements;
CC   all these elements have conservative termini: 5'-ATC and ATCTAGT-3'.
XX
CC   [1] (Consensus)
XX
SQ   Sequence 2242 BP; 923 A; 276 C; 213 G; 823 T; 7 other;
     atctatatta ttaattggga agcattgtgt gaactacaac attgtaaggg tagtttaaaa        60
     ctaactaaat gaatttttgc atgggtaatt tagtaaatta acaactacta caactaaata       120
     aatatcttgg attttgttct ttwaaaaaaa cgaatttaaa atcaataaat taataactac       180
     ccaatatttt cggaaatcat ttaaaaacgt ttccataaca tatcaggcta ttttaattcg       240
     aattgtatat atgtaaactt atttattttg gtaatatgtt attagataat tcggaaactt       300
     caatctaatt taataacaaa ttatcattta gtttagattt tatacaattt ccttaacaaa       360
     actatgttaa ttgtttctga ttagtacaca taaaaaataa ttttaaatta tgatttagca       420
     tattcaaaag agaatttttg gattttagat ttgtaattat ctagaaaata gtttcagtat       480
     agattaaaat atttaacatt ttaattagaa tttaaatgat ataaactttt aaagtatttt       540
     tttaaaacag gtaattttca ttattttaaa aatatatcac taagctaaat ttgaattata       600
     taaaagaaaa tatattttta aacgtattat aatagttaca agcttttgga atattcattc       660
     ttctagattc gattatttct ttttttttaa acagtaaaac aaagtttaaa taccaatgtt       720
     taaaattttt aatgcaaata ttcaaaatga gaaaatattg attcacacca atatyttatt       780
     tttttctttg aaatttgaat gacttttttt tggaacaaac agtaatatga tttttttgac       840
     agatcattaa ttgtattcga acaataataa ctaccatatt tgcgataatg cataaggata       900
     agtttaattt taaaaaatac caaaatcgtt gagatcatag taaattttag ctttaaaaaa       960
     aaatattttc gtcatcctaa atttaaaata tgtaattcag attagttttt ttcagtaaag      1020
     ctaagattga atccaaatta aaatctaatt ttgcgtacaa tctatctctt ataattataa      1080
     atgttatgca tacattcaca ttgcctcaca atcaatctag aatatcgatt ctttaaaaaa      1140
     aatagataga gattcataag taaattactt catgttctaa tgatgtttat ctcctaattt      1200
     tactatccat ttatgcgtat tcttatggat ttttctttca gggtcaacac tagattacaa      1260
     gaaactagcc gggtgttggt caatattata ccacanataa aatcatggaa ttaacaatca      1320
     aaatatagtt atacaatctt aaacaataaa caaaacaaat ataacttaat ttaatttttt      1380
     atttttaact aaaatcaaca aatttatyag tttataaaaa acaaaataaa aattagcacg      1440
     tggtacccta cgggtaaatc actacgattt catgaggttg caatatcaat ttatacaaat      1500
     tttgactttt aaaatatact ttatacaatt attgaaaggt atacactaaa aatcggtttt      1560
     atatactaca atatcataaa tttataaatc acaaattatt tttaaatata ttaatccaag      1620
     atgtaccaca tgtcaatccc tcgatttttt taatatatta caataacaat atttaaaaat      1680
     aacaaaataa tatttaattt tacggaatga agttatatgg tggaacgagt ttgggttgat      1740
     attaatacgg gacgataatc tacgagtgaa atcttagaat taacaattat aacacaatta      1800
     tacaatctta aacactaaac aaaataaaca atatttacaa aacaactata acttaaaatt      1860
     ygaattttta gttacaaaaa aatcgaccaa cggtgtaccg cggagtaaat tttacattat      1920
     atcatctaat tgatcaaatt tcaaacaaaa acaattaatt tatatataca tcaaactaac      1980
     aaaaatacac agattttcca aatatctcta tattattccg caaatcgaaa caaatctaac      2040
     aatctattta ctatgcaaaa tacaaataaa atataaataa tataaattaa taaaaaaaat      2100
     tagctattgt atcataaata acactataca cttttctatg cacattataa tttatacact      2160
     ayaatatctt tcactaaaaa tgtattccaa tayatttctt aaaatatgaa accccgcacg      2220
     tatgtgcggg tcagaatcta gt                                               2242
//
ID   ATR3      repbase; DNA; PLN; 2388 BP.
CC   ATR3 DNA
XX
AC   ;
XX
DT   24-FEB-1999 (Rel. 3.2, Created)
DT   24-FEB-1999 (Rel. 3.2, Last updated, Version 1)
XX
DE   An AT-rich repetitive sequence - a consensus.
XX
KW   ATR1; ATR2; ATR3.
XX
OS   Arabidopsis thaliana (consensus)
CC   consensus
OC   Eukaryota; Viridiplantae; Charophyta/Embryophyta group;
OC   Embryophyta; Tracheophyta; seed plants; Magnoliophyta;
OC   eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-2388
RC   [1]  (bases 1 to 2388)
RA   Kapitonov V., Jurka J.
RT   ;
RL   Direct submission (February 1999)
XX
CC   Individual copies of ATR3 are ~97% identical to the ATR3 consensus
CC   sequence. The nature of the repeat is unknown. Target sites are not
CC   well determined since ATR3 copies are flanked by (AT)-rich sequences.
CC   An existence of several ATR3 subfamilies determined by multiple 
CC   diagnostic positions indicates that ATR3 can be a retroelement.
CC   At the same time, multiple copies of ATR3 have internal deletions
CC   typical for DNA transposons. 
CC   ATR3 shares common structural features with ATR1 and ATR2 elements;
CC   all these elements have conservative termini: 5'-ATC and ATCTAGT-3'.
XX
CC   [1] (Consensus)
XX
SQ   Sequence 2388 BP; 953 A; 251 C; 334 G; 849 T; 1 other;
     atctatatat acatttttgg aggggatttt tgaagataat gttgaagatt tgagccataa        60
     ttcaacaatt aattcaaatg ggtgggtttt acccggttta actctgttcg gatcctggat       120
     aacatgttta attctgttct gatcttggat aacattaatt tttggaaaag ttacctaaaa       180
     actaataatt aaaaacgaaa attaatgatt taattaccaa atttaatata aacaatatct       240
     ctaaactaac catatttctt atttacctta actaatttcc taaaatattt ctacctaatt       300
     taaacataaa tatataattc ttctttcayt tttatttgat cttatacttt atttattttg       360
     aatttatata aaatatatat agttaataaa atattatatt tttttctgaa tatgatgtaa       420
     ttcaaatttt ttaaaacgga catatattat tcaacctatg aagaaataat atgtgtacaa       480
     tgtcccacat cgcttagaaa aattggacaa tggttcagac ccatattata aaaggaccaa       540
     aatgattctg attacgaatg agcaggaagc ttgatttatc aggcgtccaa aattaaaata       600
     gttatccgat tttactcgga ttttttattt taaagaattg aaactttaaa atgtttcaag       660
     aaattataaa tattataact ttatcaaaag ttaaatatta taattttaaa aactttttat       720
     aaagtttatc tttaaaaaat gctttaaata tttataattt taaaacttat aaagttttaa       780
     aaattataaa ttgaatttta caagaaattt aaacattata aatatataaa aaatatatta       840
     atacgagacg atatattaca ggaaaaatct taaatataac aatcaaaatt caatgatgaa       900
     ttttgggtcg atattgtatt ttttttaagt ttcaaatttt ataatattga aatttataag       960
     aaaatgacaa aattatgttt aatttcacgg gactgggtta tatggtagga cgggtttggg      1020
     tggataataa ttacgatttt acaatgtccc acatcgctta aaaaaattgg acaatggtca      1080
     agagccatac tataaaaagg accaaaatga tttcgattac gaatgagcat gaaacttgat      1140
     ttatgaggtg tccaaaatta aaatggtttg tttactaggg ttatttattt taaaaaattg      1200
     aaactttaaa aagtttcaaa aaattataaa ttaaatttta caagaaattt aaacaatata      1260
     aaagatatta atacgggacg atatactgcg agagaaatct tagatataac actcaaaatt      1320
     caatgatgaa gtttgggtca atattaatct tttttgaagt ttctaatttt ataaatattt      1380
     gaaatttata ataaaatgac aaatttgtgt ttaatttcac gggacggggt tatatggtgt      1440
     gacgggtttg agtggataat aacatgggat agtatgctat ggaaaaaaac atataattaa      1500
     caatcataat ataattatat aatcttaaac actaaacaaa attaacaata ttaaaaaaaa      1560
     acacttaaaa ctttaatttt tttaaaacac attttgattc ttttataaga aatttaaaca      1620
     ttataaatat ttaaacttta tactacgggt gaaattttag aattgactgt ttgggttgat      1680
     aagaatttgc gatagaacta ggagttaaat cctagaatga caatcaaaat ataattatac      1740
     aattaaatac taccacgagt gaaatcctag aattgacgag tttgaatcga tattaatatg      1800
     ggatggtgta ctacgggtga tattttagaa ttgactggtt tgggttgata ataatttgcg      1860
     atagaattag gagtgaaatc ctagaatgac aattaaaata taattataca attaaatact      1920
     accacgggtg aaatcctaga attgacgggc ttgattcgat attaatatgg gatggtgtac      1980
     tacgggtgat attttagaat tgactggttt gggttgataa taatttgcga tagaattagg      2040
     agtgaaatcc tagaatgaca attaaaatat aattatacaa ttaaatacta ccacgggtga      2100
     aatcctagaa ttgacgggtt tgattcgata ttaatatggg atggtgtact acgggtgaaa      2160
     tccgagaaac aacaatcaaa atacaattat acaatattaa acatttaaca aaataaacaa      2220
     atacaactta aaactttaaa atttgagtta taaaatttcg tctcgcggtg aattatacat      2280
     ttaaatcaaa caatagcata aatttattaa atcatcctaa aaaatattca attatttttt      2340
     atttaataaa aatataggcc cgcggtatac cgcgggttaa tatctagt                   2388
//
ID   TDD_DD    repbase; DNA; PLN; 527 BP.
CC   TDD_DD DNA
XX
AC   K02644;
XX
DT   11-NOV-1996 (Rel. 2.2, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Slime mold (D.discoideum strain Ax-3L) transposons Tdd-3/Tdd-2 3'
DE   junction.
XX
KW   transposon; DDTDD.
XX
OS   Dictyostelium discoideum
CC   Slime mold (D.discoideum) strain Ax-3L DNA, clone pDdB14.
OC   Eukaryota; Fungi; Myxomycota; Acrasiomycetes; Dictyosteliales;
OC   Dictyosteliaceae.
XX
RN   [1]
RP   1-527
RC   [1]  (bases 1 to 527)
RA   Poole S.J., Firtel R.A.;
RT   "Genomic instability and mobile genetic elements in regions
RT   surrounding two discoidin I genes of Dictyostelium discoideum";
RL   Mol. Cell. Biol. 4, 671-680 (1984)
XX
CC   This is an invertebrate, not a plant.
XX
DR   GENBANK; K02644; 81.0.
CC   Positions       1     527  Accession No K02644        GenBank (rel. 81.0)
XX
SQ   Sequence 527 BP; 276 A; 81 C; 35 G; 134 T; 1 other;
     tctagaatac atcaaaaaag caaaagatct gaaaanctta tcagcaaaag accataataa        60
     cttcaaagat cctaagatcc ttctcacttc aacgatcaag ctaagaaaaa caacagctaa       120
     ttactattgt attccagaat catctctccc aaatattata tcttttgatc aattcatatg       180
     attaaaataa cccttcagct taaatgataa gcctttaaat aaatattaaa taaaactcgt       240
     attaacacag atggacatat atcaatcttg ttaatccaat attaaaaaaa aaaaaaaaaa       300
     agaaaaacat atccatcatc aatctaacat caactacatt caatctatct actctacaca       360
     ctaattcctt caatccttgg attaggaata agaatagatc tgaataaacg agaaagaaaa       420
     aaaaaaaaaa aataaaaata aaaataaaaa atatttttat ataaacacat aattaaaaaa       480
     aaaataataa aaataatata aaaaaaaaaa aaaaaaaaaa aaaaaaa                     527
//
ID   AF018033  repbase; DNA; PLN; 5977 BP.
CC   AF018033 DNA
XX
AC   AF018033;
XX
DT   24-FEB-1998 (Rel. 3.0, Created)
DT   24-FEB-1998 (Rel. 3.0, Last updated, Version 1)
XX
DE   Magnaporthe grisea non-LTR retrotransposon MGL genomic sequence.
XX
KW   .
XX
OS   Magnaporthe grisea
CC   Magnaporthe grisea.
OC   Eukaryotae; Fungi; Ascomycota; Euascomycetes; Pyrenomycetes;
OC   Phyllachorales; Phyllachoraceae; Magnaporthe.
XX
RN   [1]
RP   1-5977
RC   [1]  (bases 1 to 5977)
RA   Meyn III M.A., Farrall L., Valent B., Chumley F.G., Orbach M.J.;
RT   "Magnaporthe grisea repeated DNA element MGR583 is a member of the
RT   LINE-1 class of polyA retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-5977
RC   [2]  (bases 1 to 5977)
RA   Meyn M.A. III, Farrall L., Valent B., Chumley F.G., Orbach M.J.;
RT   "Direct Submission";
RL   Submitted (08-AUG-1997) Plant Pathology, University of Arizona,
RL   P.O. Box 210036, Tucson, AZ 85721-0036, USA
XX
DR   GENBANK; AF018033; 103.0.
CC   Positions       1    5977  Accession No AF018033     GenBank (rel. 103.0)
XX
SQ   Sequence 5977 BP; 1389 A; 1801 C; 1743 G; 1044 T; 0 other;
     caagcatcct ccaccattca tgggtcagac ccacctttgt tagcgattca cacccaaaca        60
     caccaataag cttaacagct gaagaatttt cgccctccgc gcggtcgtca tggcctcacc       120
     agaggtctca aaccgccgcg cgcgcccgca gagcacgccg cacggtttgc cgcagggcca       180
     ggccgagtcg ggacacgtat ctctcgacac gcgcaccgct aacgcgcctc agccggctgg       240
     ccgcggaagg tactccaccg tcccggccct ggccatcaaa acactgcagc aggagttgga       300
     aaacgtggaa acagtcggca gctggctcga agaggtcttt gcagccaagc tcgaaagttt       360
     acaggccccg gaggacgccg cgcttaggag aattgttctt gaacttgacg acgtgatcag       420
     cggctggttc ctcagtcgca ccctccctga aaaagagcgt tcgcgctccc cgtccggttc       480
     gccgaccagt tccagcgaaa ggcgcagcat tttaattacg aggacgggca cggcgtcgtc       540
     ggcctctaaa ggcagaggca cgcccactaa caaatcggtc acatgggccg agcgagccgc       600
     cacgccacca gcggcggccc caacgcgaat tttaaccccg gccacgcgct cgtacccgat       660
     acgtacgacg cccggcaatg cacctgacag ctccgcaact ccctcccaat cgggccggga       720
     ccgctcccaa gccccgaaac gtttgacaga acagccgtcc aaccgcatcc tgatccgcgt       780
     aaatgacaaa ttgcggatgg tgacgaggga gccatacgcg gtaacgacca aattggccga       840
     attggtctcg gtgccacaca gtgaaatccc aaacgccaag cgtaccccca cgggctgggg       900
     tgttacggtg gcctctgagg aaacacggca aaaactcctc aaccccagcg cggtcaaggc       960
     cattatggac gcattggacg cgcgggaagt cactgtcccg acaacctggc acacatacgc      1020
     cgtctctgga gtgccccgaa cgctcaattg cctggacgga agaaaggacg tacatgaggt      1080
     aatccaggag gagattaccg tggcagcagg ccagcagcca gtcaactggc atatttccaa      1140
     acatggttac gacccacata cggctgaggg cacgtggata gtgtccttcc ttcaacccgt      1200
     aaagcccttt cagctttttg gagtgtcgaa acgtgcgcgg aaggttgaaa aatcacgcaa      1260
     aattacacac caccacgacg gttgccaggg atattgcgaa atacgtcgct gcgtacggca      1320
     agcgcgttgc ggcatatgtg gtgaagcaaa acatgcgaca gaggaagagc cgtgcaaggc      1380
     agcccccaaa tgcgttaatt gccacggcca tttcccatcc ggacatgaga attgccctgc      1440
     ccgacctttg gtggtaaatg ggaagcttga acgaccttca cagcgtaaac ttaaggggat      1500
     tcgcagaatc ggacgtgcca accgtgccgc gattatcaac gaccgggccg aaacggcccg      1560
     ccgagagcca gcacctgcaa tcccggtcct aagcacctca tcgcagcatt cgcaaacctc      1620
     gagctcccga tcgagcattt caaacaaaag agcgcggcca tgcgaggcgg caggggcgga      1680
     catccgtaac ttcctgcagg ttgaacagga acgcgtgcac gacgaaatcg tttgggcagc      1740
     cgaaatggag gaggacgcag cggctgccga accttgcccc gctgatggga tagacttgga      1800
     agcaacccgt cgattaatat gacgaaatac tcgctcggca atatgcagcg ggaatgcctc      1860
     gacgtagttt gggccaacgt aggtaaaagg atgggtgtgc atctgagcct attggagttg      1920
     tgccaccaga gaaaggtgga cctggttaac gttcaagagc catggtgcgg gctaaatacg      1980
     actacacaaa cgcacccggg ctatgatgtt tttgcgccag tggacgaatg gcacgccaac      2040
     acttacgaag ccatgactgg gctccggccc cgggtgctca cctacgttaa gaagggggca      2100
     gccctaaggg ccgcacaacg acggctaccg cagggccaaa atacgcggga catactctgg      2160
     ctcgaaatta acggaatatt gtttgttaac gtatataggg ctccgggcac tgaagccgcg      2220
     ctggaaatgg tatgcaatac cgtgccaaat ggacccacgg tgctaggcgg cgattttaac      2280
     gtagcggctg ctgcatacca gccgggccgc gcaaacgcac gcggagggga ccaactgacg      2340
     gcatgggcgc aagcccaggg gatgagtttt acaggaaata tcggcgtgcc cacccaccgc      2400
     gacgggggtt tactggatat ggtcttttcc aacctcccca gcacaataac tgtggttgac      2460
     agcagtcttt acacaggctc cgaccacgaa tccctttata ccacgctgcg gacgcgcggc      2520
     gccccccgcc cggaggcgat caacgtttcg gttagggacg accggttacc aaagttcgcg      2580
     gagctacttg cttttggcat gcaagacatg ccggacccgg gatccgcggc cgatgcgtac      2640
     gcattggacg cgtgggtagc tgaatttaca actttatggg agcaagtgac gtgggtcgtg      2700
     ggtacgccgg cgggaaaaag ggacagctcg gctccctggt ggaccgaaaa ctgccagcgc      2760
     gtctggtccg aattccagcg ggttaaacgg agcgctgtaa atagggcaga cgcctctgcc      2820
     gaggaaaaag cctatacgaa aggggtgcgg gccgcgaagc gggagtactg gaggcaccgg      2880
     atcgaccaac tgcgcgacga taaggatttg tggaacatgg tgggctggct gggagccgga      2940
     ccacgcctcc ggtccccgcc gctggttatt aacggcgagc aagtgagcga gcctttagca      3000
     aaagcggaag cactgcaacg ggaggtgctt ggccgatttt cggcggagga tgacctgcag      3060
     ggagacccct tggaggcctg gtcgccggac gaggctaaaa tcccttggga cacccaggtt      3120
     agtgcggaag aggcggagcg ctcctgcatt ggggttacga gcacgtcccc gggcatcgac      3180
     ggaataaccg tccggctact aaaagccgga tgggcttcgt tggccgagcc ggtgcgcagg      3240
     ctctaccaac gttgcctgga actcggacat ttcccagcgc cttggaagaa ggccgaagtc      3300
     gcgatgctac cgaaaacggg gaagaaagac cggagcagcg ttcgatcctg gcggcctata      3360
     gccctcctct cctgcatcgg aaaaggcctc gagaggctcg ttgcacgccg gatagcttgg      3420
     gccatacacg acaacgggct ccttagctgc acccacggcg gtgccctacc caaacgatcg      3480
     gcgacggatc tggtttgtgc cctcgcccac gatatcgagc aggctttagc tcgcggggag      3540
     gaagttaccc ttgtcgcatg cgacgtccaa ggcgccttcg acgccctcct ccatgggcga      3600
     ttaatacgga aaatgcggag cctcgggttt agtaaaatgc tcctcaggtt cgtgattaac      3660
     tttttaagcg gccgccaggc ccgagtccgg ctggagggta cgaccacggg ctttaggcgg      3720
     cttgggtgcg gcaccccgca agggtctccc ctttccccga tcctatatat gctatatttg      3780
     gcgtatctcg tcaaaaacgg tacgaagtgg cggttggcat acgcagacga cgtgcttaca      3840
     tggaaatcgt caccctcgtt ggaggaaaac gtacgttggc tggaagataa actccgggat      3900
     atgcacgaaa ttgcggcgga agagaagatc cattttgcag cggaaaagac agaggtgatc      3960
     catatcacta agaaaaggca cggtcgcaac ccggaaatcc ggattaatgg tagaacggtt      4020
     accccggtcc aactaccggg cggtcgacgc ggacaaagcg cctccggggc cgagcgctac      4080
     ccgggcatgc gttggcttgg tttttggttt agccgacggc tagacgggcg ccgccacgtg      4140
     gccgaaaggg ctgccaaagc aatggcggtc gctgcccacc tcaagagctt tggggcagta      4200
     agatacggac cgcctgcggc tgcacttcgc aaggcagcgg tggcatgcgt gggttcctcg      4260
     gccacctacg cagccgaggc atggtacaac ccagcgcaca agcaaagagg actcctcaaa      4320
     gcattgaaca aaccgctggt tttagcggca cgggcaatcc tcccggcgta taaaaccacc      4380
     ccctcgtcca ctgttctcag ggacgcagga ctaccctcgg cccgcgtcgc gctggcctac      4440
     acccgcctga aatacggcgc ccgactaagg ctcgcggaca aggggcaccc ccttgtcagc      4500
     cgcctgcgtg aaacacctcg tgcccgcaac tcgggccatt cggccacgac cctgcaaacg      4560
     gctgcacaac ttctcccgcg gatccggaga ctagagttgc gcgcacctcg caatgccccg      4620
     gattctcgca ctgaccccac cggaggagtc ccgaaagagg aagcggcccg ccgctttatc      4680
     gaatggctgg acatggtatc acctgacgat atcgtggtat atacggatgg ttcggaaaaa      4740
     cacgaaaaca actgcgtcca aatagggtac ggatgggccg cttttagggc gggcctggaa      4800
     tttgccgcac gtgccgcatc tattacgccg gaaagccacg ttttcgacgc cgaggcgatt      4860
     ggcgccctaa aagggctaca ggcggcagcc aaggcccagc caggcgcccg gatctggatt      4920
     tgtgtggaca gcacctcggt tatttggggt cttagaggcg acgcgccgcg ttcgtcccaa      4980
     tgggcctttc tggagttcca taaccttgtc gatctactcc gaaaacaaag taccgaggtt      5040
     cgggtccgtt ggtgccctgg gcaccaggga atcccgggaa acgaccgggc tgacgagctg      5100
     gccaaggccg gctccgccgg accgccggac ccagacccga gggctcagca aaccacgtat      5160
     agcggtgccg gcacggtcct cagagccatt ctttcgaata tagagaagga ctggtggcgt      5220
     aaagaactct gtgaacggtc ccccgcatat agggaatgga aattccaata cacaccgaga      5280
     aaggagcccg aggaactgcg tttgccaaga cccctactgg gccattattt ggccatgagg      5340
     accggccacg gcgatttcaa agcctaccat gaccgtttca accaccagga tgcaaacacc      5400
     tcgtgtgcct ggtgctggaa gcggacctcc cctgaacacc cggtgcactg ccgcttttcg      5460
     cgggcggtgt ggagaaactg gccgtggcct gacaacgacc ggccggtcgg gccgccagac      5520
     cgcgcccaac gccgcaaatt cttccagaca agcctcgggc aaccgaaaag ctttgaggcg      5580
     ttttcgatag ccaccaacta cttcagcgcc cgccccagag cggcccgcca gcgccccgcg      5640
     cgccacgaac gcactttacg cctagggaca ccgatcgtaa acgactcgaa ctctgacgag      5700
     gaatagactt actgcctttt cacccacact tcacggcaca agccgctaga cgaaccctcc      5760
     gtgcacctta ggcacggggt cgcgtcagtg aactaacccc ctaagcagga ccgggcccga      5820
     acccggtcag gcacgatccg cctctgccct ccttgttttc cccctgtgta aataaagaag      5880
     atagaacgcg cgccgagata cccctcggga ggttgctaac ggccggctaa caagccgggc      5940
     cgagcccggc gttaactaat actactacta ctactac                               5977
//
ID   BRENSPM1  repbase; DNA; PLN; 2112 BP.
CC   BRENSPM1 DNA
XX
AC   AB022082;
XX
DT   13-APR-20001999 (Rel. 4.0, Created)
DT   13-APR-20001999 (Rel. 4.0, Last updated, Version 1)
XX
DE   A portion of En/Spm-like DNA transposon.
XX
KW   DNA transposon; transposase; En/Spm superfamily; BRENSPM1.
XX
OS   Brassica rapa
CC   Brassica rapa (haplotype:S9) DNA, clone:E89.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; core
OC   eudicots; Rosidae; eurosids II; Brassicales; Brassicaceae;
OC   Brassica.
XX
RN   [1]
RP   1-2112
RC   [1]  (bases 1 to 2112)
RA   Suzuki G.;
RT   "Genomic organization of the S locus. Identification and
RT   characterization of genes in slg/srk region of s(9) haplotype of
RT   brassica campestris";
RL   Genetics 153, 391-400 (1999)
XX
DR   GENBANK; AB022082; 116.0.
CC   Positions       1    2112  Accession No AB022082     GenBank (rel. 116.0)
XX
SQ   Sequence 2112 BP; 644 A; 375 C; 516 G; 577 T; 0 other;
     atggctggct ctgggactat ttacgagttg cggaattgga tgtatatgca tagagatgct        60
     aacgggagag tgacgaaaga ataccttgcg gggctggaga catttatgca ccaagcagat       120
     tcaacaccgc tcgcccaaga aagtggtaag atgttctgtc cttgtcggaa atgcaacaat       180
     tcgaaattgg caaaccgtga aaatgtttgg aagcatttaa taaatagagg tttcacgcca       240
     aattactata tctggtttca acatggggaa ggttataatt atgatcagaa tgaagctagt       300
     agtagtaata gcaattttca ggaagaaccg gttaatcatc atttgcataa tgaacatagt       360
     taccatcagg aggagatggt agattatgat agggttcatg atatggtagc tgatgcattc       420
     gtagctcatg atgaagatga agaacctaat atagatgcaa aaaagtttta cggaatgtta       480
     aacgcggcga atcaaccact ttacagtggt tgtagagaag gtctctctaa attgtcgttg       540
     gctgctagaa tgatgaatat taaaactgat cacaatctac ctgaaagttg catgaacgaa       600
     tgggcggact tgtttaaaga gtatttgccg gaagacaatg tgtctgctga ttcttattat       660
     gagattcaga aattagttta tagtcttggg ttgccttcgg agatgataga tgtctgcatc       720
     gacaactgca tgatctattg gggagatgat gagaagctcg aagcatgtcg attctgcaag       780
     aagccacgat tcaagccgca aggacgggga cttaataggg taccgtacca aaggatgtgg       840
     tacctaccaa ttacagacag attgaaaaga ttgtatcaat cagagcagac tgctgcaaat       900
     atgagatggc atgccgagca tactcagacg gatggtgaga tgactcatcc atcagatgca       960
     agagcctgga aacatttcaa caaagtacat ccggattttg ctagcaatag ccggaatgtg      1020
     tatctcggat tatgcacaga tggatttaat ccgttcggaa tgtcagggag acaatattca      1080
     ttgtggccag tctttcttac gccatacaac ctgccaccgg agatgtgcat gcaacgggag      1140
     ttgctattct tgacgatatt gatacctggt ccgaaccatc caaaaaggtc cctggatgtt      1200
     ttcctacaac cactgataaa agagttgaag gatttgtggt caacaggggt gaggacgtat      1260
     gattgttcaa cgaagacgaa ttttacgatg cgagctatgc ttttgtggac cataagtgac      1320
     tttcctgcat atgggatgtt gtctggatgg actacacatg ggagattagc ttgtccatat      1380
     tgtaatggaa cgacagatgc gtttcaactg aagaatggta ggaagacaag ttggtttgat      1440
     tgtcatcgtc gatttcttcc cattggccat ccttaccgaa gaaacaagaa tttgtttagg      1500
     cacaaaaggg ttgtgagaga cacttctcca ccatatctaa ctggagaaca aattgaagca      1560
     caaatcgact actacggagc taacgaaaca gttcgttggg gtggtaattg gcatgtccct      1620
     cgtaatatgc ctgattctta cggtgttcat cacaactggc acaagaagag tatattttgg      1680
     gagttgccat gttggaagga tcttcttctg cgccacaacc tcgatgtgat gcatatagag      1740
     aagaatttct ttgagaacat catgaataca atattgaatg tcccagggaa gacaaaagac      1800
     aacataaaat cgaggttgga cttgccggat atttgctcaa gaagcgagtt acatattaaa      1860
     agcaatggac aagttcccgt tccgatattc agactgtctt cagaaaaaaa gtcggtgttg      1920
     ttcaactggg tggcatcaga agtgaagttt cccgatgggt atgtttcaaa tctctctaga      1980
     tgtgttgaaa agggtcaaaa gttctctggg atgaagagtc atgattgtca tgtctttatg      2040
     caacgactac tgccctttgc atttgcggag ctacttccaa caaacgtaca tgaagcactt      2100
     gcaggttcgt ag                                                          2112
//
ID   RIRE3_I   repbase; DNA; PLN; 5775 BP.
CC   RIRE3_I DNA
XX
AC   AB014738;
XX
DT   02-JUN-2000 (Rel. 4.0, Created)
DT   02-JUN-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   Gypsy-type LTR retrotransposon RIRE3 DNA, internal region,
DE   complete sequence.
XX
KW   LTR retrotransposon; retrovirus; GYPSY superfamily; polyprotein; RIRE3.
XX
OS   Oryza sativa
CC   Oryza sativa (sub_species:Indica, strain:IR36) shoot DNA.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   euphyllophytes; Spermatophyta; Magnoliophyta; Liliopsida; Poales;
OC   Poaceae; Oryza.
XX
RN   [1]
RP   1-5775
RC   [1]  (bases 1 to 5775)
RA   Ohtsubo E.;
RT   "Direct Submission";
RL   Submitted (22-MAY-1998) to the DDBJ/EMBL/GenBank databases. Eiichi
RL   Ohtsubo, The University of Tokyo, Institute of Molecular and
RL   Cellular Biosciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-0032, Japan
RL   (E-mail:eohtsubo@ims.u-tokyo.ac.jp, Tel:+81-3-5684-3269,
RL   Fax:+81-3-5684-3269)
XX
DR   GENBANK; AB014738; 116.0.
CC   Positions       1    5775  Accession No AB014738     GenBank (rel. 116.0)
XX
SQ   Sequence 5775 BP; 1402 A; 1522 C; 1524 G; 1327 T; 0 other;
     gttggtatca gagccccctt gaccctagga cgagctgtag atccgaagcc ttagcagtat        60
     tttcgaaata aaaatccttt gttatttgtg aaaaccctct agtctctctc tgtcttgctg       120
     cttcatttat cgtcaaaatc tgacctttaa aatgttgttt ttcttttttg tttttgtttg       180
     tagatggccg gcagcgtcac ccgtcgtggt ttggacatga ctggcttcgt cttggagctg       240
     cggggcatgt gcgttgtcct ggggtatcca catggagtgg actaccaggc caggccgctt       300
     ccggagcagg agggtgacga tgcagagccc cacgctgctt gggaggtcac tgcagtgatc       360
     ctctctggct ctcccgagcg gacttcgctg gcagtcaccg cgggtgggga ttccttcccc       420
     gccgcttgcc agagcgccgc tctcctcgcc atcggcaccc ttcactagcg ctacccggac       480
     gagttgcagc actcgcccta ccgctaccac catcgccgcg gaggagcccg cgactacgcc       540
     accttccggg atgctagctc ggaagatgac gttaccatcg tgcacctggc gcgcatggtg       600
     gaggcgtatg acgcggctcg tatcgacttc catcaaatgg tgcgccgtgg gatggttgaa       660
     aacaacttga aaatcctgga gctgcgtcag gagaacctgc agctcaagaa ggacttaaac       720
     gcggtggagg cgcagctgca tcagctcaag atcgcccagg gagaggacag ccgtcccaag       780
     cgtcgccgcg tcttccgcag ccagaagatc accgcccgca agagcacctc caggcccgag       840
     cttgttcgtc agtccctggc gtggacctgc ttcgtcgaga cccctcgtgc cgagcccgcg       900
     cccgtggttc cccaggaggg ggaagcatcc ggcgttggta gcacggagga tgcgctgttg       960
     ctcaccttcc gtcctggccc gtcgcagcag tagacgagca gttagtaggc tcgcgcgtgt      1020
     gttctttctc gtttatcttc ttgttgagtc gtgtggggca tggttatgcc ggtgtgtggt      1080
     ataactgtgt cggagcctgt cttattttat ttgcctaagc aacttgaact ctaatgaacc      1140
     aatttaatag cagtaataaa ttcaagaatt atggtagtcg tgggtggtta gttttaatag      1200
     ttagctcttt ctgtttgctg gatccgtgtg gggtttacag atggtgacaa ccaggagaac      1260
     tgctaatacc ggtgatggca accaacccga aggcagcaac atcaacaacc atggcagccc      1320
     acctccacct ccgcctcctc caccaccccc agacaccaac gccattctca ctcaaatcct      1380
     cgcccagcaa gccaacatga tggctgcttt cctccaccac atccaaaatc caccacggca      1440
     taatgctcca cctccaccac cacccccgca acactctgag ctcgccgagt tccttcgcat      1500
     tcgcccgcct accttctcca gctccaataa ccccgtggat gccttggatt ggttgcatgc      1560
     agtggggaag aagttagaca ctgtgcagtg caacgataag gagaaagtca tctttgccac      1620
     ccaccagctg caggggcccg catctctatg gtgggactac ttccaggcta cgcagcccga      1680
     ggggcagcct atcacctggg cccgtttcac cgccgctttc cggagaaccc atgtgcccgc      1740
     cggagtcgtg gctcttaaga agagggagtt ccgagagttg aagcaaggca accgctccgt      1800
     gatggagtat ttgcacgagt tcaacaatct ggcccggtac gctccggagg atgtgcggga      1860
     agatgaggag aagcaagaga agttcttggc gggaatggac cctgagctgt ccgttggtct      1920
     agtctctggg gactatccgg atttccaacg tctggtggac aagagcatcc gcttggaagc      1980
     caagcacaag gagctggagt cgcacaagcg ccgcttggcg aacttccgca atcagcaggg      2040
     tgctaaccag agggtccgct acaccaatcc ctatccaggg ggatcctcct cgcagcagca      2100
     acaacaacag cagcagcaat cccgccctgc gcctcgacct caattcgtgg tgcgcgtccc      2160
     acagccgcag cagcagcaga atcagcaagg gactcgtgcg ccccgtcctc ctacgccagc      2220
     tgtgcagccc gttcaaggcc gcagggacgc ttcaggtccg cagcgtctgt gcttcaactg      2280
     cttcgagccc gggcactttg cggataaatg cccgaagccg aggcggcagc aaggccaagc      2340
     gcctccccgc cccaacaacg gcgggaagga tgtcattcgg ggccgtgtga atcacgtgac      2400
     ggccgaggac gtgctgacaa ctccagactt catcgttggt acgttcctcg ttcattccat      2460
     ccctgctacc attttgttcg actctggagc ttcccactcg ttcatatcta tgccattcgt      2520
     ggggaaaaac cagttggggg tagaaaggct tagaaaccct ctgctcatca ccacccctgg      2580
     aggggttatg acagcaaagt attatagtcc tgccgtccct atagaaatcc aggggattcc      2640
     ttttccctcg gatctgattc tgctagacac caagaacttg gatgtgatcc ttgggatgaa      2700
     ttggttggct caattccaag gagtagtgga ttgcgcgaga cgcactgtca ctctgtaccg      2760
     agggccggaa caaccggttg ttttctttgc acccccaacc tctgtcagaa gttcagaact      2820
     gcattagata ggactgtcag aaatccccat tgtcagagag ttcggagacg tgtttccgga      2880
     agaactacct ggtatgccgc cccagcgaga gattgagttc cggatagatc ttgctccagg      2940
     aaccactcct ctgtacaagc gaccctaccg tatggcagca aatgaactgg ccgaagtcaa      3000
     gaaacagttg gaagagttga aagaaaaggg gtatatacgt ccgagtactt ccccatgggg      3060
     tgctcctgtg atttttgtag agaagaaaga caagacgaag aggatgtgcg ttgactacag      3120
     agctctcaat gaagtcacta tcaaaaacaa gtaccctctt ccccggatcg atgatctgtt      3180
     cgatcagctt aaaggtgcca ctgtattctc caagattgat cttcgttccg gatatcacca      3240
     gttgcgcatc cgggaagaag atattccgaa gaccgcattc accacgcgat acgggctgta      3300
     tgaattcacg gtgatgtcgt tcggtctaac caatgctcct gcatttttca tgaacttgat      3360
     gaacaaagtg ttcatggaat acttggataa gttcgttgtg gttttcatcg atgacattct      3420
     gatatactca caatcagagg aagaccatca gcaccatctc cgtctggtgt tgggaaagtt      3480
     gcgggaacat caattgtatg ccaaacttag caagtgtgag ttctggttgt ccgaagtcaa      3540
     attcttaggg cacgtgatat ctgctaaagg agttgcggtg gaccccgaaa cagtgaccgc      3600
     cgtcactgat tggaagcaac ccaagacagt cactcaagtc cgcagtttct taggtttggc      3660
     aggatactac cgaagttgta tcgagaactt ctccaaaatc gctcgaccca tgacacagtt      3720
     gttgaagaaa gaagagaaat ttgtgtggag cccgcaatgc gagaaggcgt tcaaaaccct      3780
     caaagaaaag ctggtttcct cgccagtgtt aatcttgccg gatactcgca aggatttcat      3840
     ggtgtattgt gacgcttcgc gccaaggatt ggggtgcgtg ctcatgcagg atggtcatgt      3900
     ggtggcctat gcctcacgcc agctacggcc tcatgaaggc aactacccta cccatgattt      3960
     ggagttagct gcggtggttc atgctcttaa gatcaagcgg cactatctca ttgggaatcg      4020
     ctgtgaaata tatattaatc ataagttttt gaaatacatc ttcactcagt cggatctgaa      4080
     tcttcggcag agaagatggt tagaactcat caaggattat aatgtgggaa tccactatca      4140
     tcctggtaag gccaacgtgg ttgccgacgc tctaagtcga aagagccact gcaacactct      4200
     caacgtccga ggcattccac ccgagcttaa tcaacagatg gaagccctga acctaagcat      4260
     agttggtcac ggattcttgg ctgcgttgga agccaagccc accttgctcg atcaaatccg      4320
     cgaggctcag aagaatgatc cggacatgca tggactcatc aagaatatga aacagggtaa      4380
     agctgctggt ttcacagagg atgaacacgg aaccttatgg aacggaaagc gagtatgcgt      4440
     tcccgataac agagaactta aacaactgat acttcaggaa gctcacgaaa gtccttattc      4500
     cattcacccg ggcagtacca agatgtactt agacttgaag gagaaatact ggtgggtcag      4560
     catgaagcgg gaaattgcag agttcgtggc tctttgtgat gtgtgccagc gtgtcaaggc      4620
     agagcaccaa cgaccggccg gacttctcca acctctccaa gtgccggaat ggaaatggga      4680
     tgaaattggg atggatttca tcaccggcct tccaaaaacc caaggtggat atgattctat      4740
     atgggtagtc gtggatcgat taaccaaggt ggctcgattt attccggtga agaccaccta      4800
     tggagggaac aaactagcgg aactctactt cgctaggatc gtgagtctcc atggcgttcc      4860
     caagaaaatc gtatctgata aggggagcca attcacctct cacttttgga agaagctcca      4920
     agaagagctt ggtactcggt tgaatttcag caccggttac cacccgcaga cagatggaca      4980
     gaccgagcgt ctaaatcaaa tcctagaaga tatcgttcgc gcatgtgtcc tagatttcgg      5040
     gaagacctgg gataagagtc tcccctatgc cgagttctcc tacaataaca gttatcaagc      5100
     cagcatacaa atggcacctt atgaagcgtt gtacgggcgc aaatgtcgga caccgctatt      5160
     gtgggatcaa gtcggagaaa gccaagtgtt cgggactgac atcctgagag aagctgaagc      5220
     taaagtcaga atcattcggg ataatctaaa ggtggcacag tctcggcaga aaggctatgc      5280
     agacaaccgt cgccgtgact tggaattcgc agtggatgat tttgtgtatc tccgggtaac      5340
     accattgcga ggggtacacc ggtttcagac gaaaggaaac tcgcacctcg gtatgtgggt      5400
     cctttccgta tcgttgctcg acgcggagaa gtcgcttacc aattggagct gcccgcctcc      5460
     ttgggcaacg tgcatgatgt gttccatgtg tcgcaactca agaaatgcct tcgagtgcca      5520
     tccgagcagg ccgactcaga gcaaattgaa gttcgcgaag atttgaccta cgtggagagg      5580
     ccagtgaaaa tcctggacac catggagcgc aggaccagga accggataat ccgtttttgc      5640
     aaggtccagt ggagcaacca cgccgaagaa gaagctactt gggagcgcga agacgagctg      5700
     aagacagccc atcccgatct cttcgccagt tcttccgaat ctcggggtcg agattccgtt      5760
     taaggggggt aggtt                                                       5775
//
ID   TAR1      repbase; DNA; PLN; 3631 BP.
CC   TAR1 DNA
XX
AC   AB008772;
XX
DT   30-MAY-2000 (Rel. 4.0, Created)
DT   30-MAY-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   TAR1 is a copia-like LTR retrotransposon, a partial sequence.
XX
KW   LTR retrotransposon; endogenous retrovirus; COPIA superfamily; TAR1.
XX
OS   Triticum aestivum
CC   Triticum aestivum (cultivar:Chinese Spring) DNA.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   euphyllophytes; Spermatophyta; Magnoliophyta; Liliopsida; Poales;
OC   Poaceae; Triticum.
XX
RN   [1]
RP   1-3631
RC   [1]  (bases 1 to 3631)
RA   Matsuoka Y., Tsunewaki K.;
RT   "Direct Submission";
RL   Submitted (10-NOV-1997) to the DDBJ/EMBL/GenBank databases.
RL   Yoshihiro Matsuoka, Fukui Prefectural University, Department of
RL   Bioscience; Matsuoka-cho, Yoshida-gun, Fukui 910-1195, Japan
RL   (E-mail:matsuoka@fpu.ac.jp, Tel:81-776-61-6000(ex.3616),
RL   Fax:81-776-61-6015)
XX
DR   GENBANK; AB008772; 116.0.
CC   Positions       1    3631  Accession No AB008772     GenBank (rel. 116.0)
XX
SQ   Sequence 3631 BP; 1024 A; 674 C; 897 G; 1036 T; 0 other;
     gtcgacctgc aggtcaacgg atcattgggc tcctagttgc cctaatcgct atgacaagcg        60
     tcatcctagg aaaggcggca agaccgctaa tgttgtcatt ggagacactg acatgaagga       120
     tgctgggtat ggtatattcc ccactattct ttcagtatgt cattctccta attggttgat       180
     tgacacgggt gctaatgtgc atgtatgcgg tgatatttcc atgttttcgt cttatcaggc       240
     cgcagggact tcaaccgtgc taatgggcaa cggttcaagt gcttctgttc gtggtgttgg       300
     cacggtcgat ctgaagttta cttcggggaa gatcgtgcgg ctgaggaacg tgcattatgt       360
     cccctccgtc aataaaaatc ttgttagcgg atctcttctg tgtagagatg gctataagct       420
     tgtctttgag tcgaataaat ttgtaatatc gtttatcctt atcagacgtt tgcaataaag       480
     ttgttaatca tatttgcaac aatagtgaat caaatgtgtg gcattcacgt ctttgtcatg       540
     ttaactttgg ttgcatgtcg cgactagcga agttgaactt aatccctagt ttcaccactg       600
     tcaagggatc taagtgtcaa gtgtgtgtgc aagctaagca acctcgtaag tctcacgtga       660
     ctgcggagac gagaaatctt gcaccactag aacttataca ttcagatcta tgtgaaatga       720
     atggtgtttt gacaaaaggt ggaaagaaat atttcatgac gttaattgac gactccacta       780
     gatactgtcg tgtgtatctt ctgaaatcta aggatgaggc tttgaacttt ttcaagatat       840
     ataaagctga agtggaaaac caacttgatc ggaaagtcaa gaggcttagg tccgaccgtg       900
     gtggagagta tttttccaat gaatttgatg ctttttgtgc ggaacatggt ataatccatg       960
     agaggacgcc tccctactca cctcagtcaa atggggtggc cgaaagaaag aaccgtactc      1020
     taactgattt ggttaacgcc atgttagaca catcgggtct ctccaaggca tggtgggggg      1080
     gaggcgatat tgactgcttg tcatgtccta aaccgagttc ccacaaagaa caaagagata      1140
     gctccattcg aggaatggga gaagaaaagg ttaaagctct cttatctgcg aacctagggt      1200
     tgtttggcga aagtcgatgt gccaatccca aagaagcgga agctgggacc aaaaactgtg      1260
     gattgtgttt tcctgggata tgcttttcat agcataggct atagattctt ggttgtaaaa      1320
     tctgaggtat ctgacatgca tgtcggtacg atcatggagt cgaatgatgc gactttcttt      1380
     gaagatatct ttcccatgaa gaatatggct acctcatcta atcaggagat gcctagttca      1440
     tcgaatcagg aaccggttac aattactgaa cctgccattt tgatggaaca ctttgaaagt      1500
     cctgtggagg agaacaatga agttcctact aggagcaaga gacagaggac tgcaaagtct      1560
     tttggtgatg attttcttat gtatctcata gatgacactc ccagttctat ttcggaggcc      1620
     tatgcatcgg aagatgctga ctactggaag gaagcggttc gtagcgagat ggattctatc      1680
     ttggcgaatg aaacctggga gataactgat cgtccttatg ggtgcaaacc tataggatgc      1740
     aaatgggtat tcaagaagaa gcttaggctt gatggtacta tagaaaagta caaggctcgg      1800
     ctcgtggcta agggttatac ccaaaaggaa ggtgaagact tctttgatac ttactcacct      1860
     gtggctcgac tgaccactat tcgagttcta ctttcactag ctgcctcaca tggtcttctc      1920
     attcatcaaa tggatgttaa gactgctttc ctaaatggag agttggatga ggaaatttat      1980
     atggaacaac cagatgggtt tgtaatagat agtcaggaag ggaaagtgtg caagttgctg      2040
     aagtctttgt atggactcaa gcaagcaccc aaacagtggc atgagaagtt cgaaagaact      2100
     ttaacaactg caggctttgt tgtgaatgaa gctgacaaat gtgtgtacta tcgccatggt      2160
     gggggcgagg gagttatgct ttgcttgtat gttgatgaca tactgatttt cggaacaaat      2220
     ctgaatgtta ttaaggaggt caaggatttc ctatctcgtt gttttgagat gaaggattta      2280
     ggagtggctg atgtcattct gaacatcaag ttgttgagag atgatgatgg tgggattaca      2340
     ttgcttcaat ctcactatgt ggaaaagatc ttgagtcgct ttggctatag tgactgcaag      2400
     ccctctccaa caccatatga tgctagcgtg ctgcttcgaa agaatcaaag aattgctaga      2460
     gatcaattga agtattctca gattattggc tcgcttatgt acttagccag tgctacaaga      2520
     cctgacatct cttttgctgt tagcaaactg agtcggtttg tttcaaaacc aggagatgtg      2580
     cattggaaag ctctagagag agttttgcgt tatttgaaag gcactgcgaa ttatggaatt      2640
     cactacactg ggcatccaaa ggtgcttgaa gggtatagtg actcaaacta gatctcagat      2700
     gctgatgaga taaaggccat gagcggttat gtattcactc atggaggtgg cgctgtttct      2760
     tggaagtctt gcaagcagac catcttaacg aggtcaacaa tggaagcaga actcacggca      2820
     ctagatacag ctgcggtcga agcagattgg cttcgccggc tcttgaatga cttgccggtt      2880
     gttgagaaac ctgtaccggg tatccttatg aactgtgata atcaaactat gatcacgaaa      2940
     gtgaacagtt caaaggacaa catgaagtca tcaagacacg ttcagagaag gttaaagttt      3000
     gtcagaaaaa tgaaaaactc cagagttatt gcattggatt atgtccaaac gtctaaaaat      3060
     ctggcagatc cttttactaa gggtctatca cgtaatgtga tagataatgc atcgagggag      3120
     atgggtatga gacccacaat atgagttgtt cacagtggta acctattctt tgtgatcgga      3180
     gatcccgtga attagatgtg gaagacaagc tgttggtcaa ctgggaggag agtattccta      3240
     ctgataaaat accactccat gaagatgcaa tactctccta atctgcatgg caggttgatg      3300
     tatatcttaa tatgttctaa gtggctcttt gaagcagaga tgttgtcttg cagaacatct      3360
     tttgaagaac gcacctatat gagtctgatt gttaaacgtc acaatctatg agagtagggt      3420
     tctctctagt aaactcatga aaggtcacgg agtatgacgc ataagctcca cccgcgggga      3480
     agacccacgg tagccacgta tcggtcaagg ctttatgtga agctagattc gcagaaaact      3540
     tgcagttcaa ggcccagtcc actgttcaag ttgcttacta gtgtagcata gagttctagg      3600
     tggaagttca acttaacagt ctccactgca g                                     3631
//
ID   BAGY2_HV_I repbase; DNA; PLN; 6563 BP.
CC   BAGY2_HV_I DNA
XX
AC   AJ279072;
XX
DT   16-OCT-2002 (Rel. 4.3, Created)
DT   16-OCT-2002 (Rel. 4.3, Last updated, Version 1)
XX
DE   Hordeum vulgare gypsy-type retrotransposon, BAGY2_HV_I,
DE   internal region.
XX
KW   LTR retrotransposon; GYPSY superfamily; internal region;
KW   TREP206; BAGY2_HV_I.
XX
OS   Hordeum vulgare
CC   Hordeum vulgare (barley)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Pooideae;
OC   Triticeae; Hordeum
XX
RN   [1]
RP   1-6563
RC   [1]
RA   Vicient C.M., Kalendar R., Schulman A.H.;
RT   "Envelope-class retrovirus-like elements are widespread, transcribed
RT   and spliced, and insertionally polymorphic in plants";
RL   Genome Res. 2001 Dec;11(12):2041-9.
RL   PUBMED  11731494
RX   MEDLINE; 21588060.
XX
RN   [2]
RP   1-6563
RC   [2]
RA   Wicker T.;
RT   "Direct Submission";
RL   Submitted to TREP database.
XX
RN   [3]
RP   1-6563
RC   [3]
RA   TREP;
RT   "Direct Submission";
RL   Submitted (02-APR-2002) to Repbase Update
XX
DR   GENBANK; AJ279072.
CC   Positions  13344  19906  Accession No AJ279072    GenBank
XX
SQ   Sequence 6563 BP; 2000 A; 1392 C; 1270 G; 1901 T; 0 other;
     actcccccaa gcttaaacct cgcttgtcct caagcgaaaa ccaagatcat aaacatgtcc        60
     acatgtttag ggatgaaggt ttcgataaaa cataatacaa acatgagggc atcatgatca       120
     cacatagaac aacaatacat cataaagatt cttatgggaa agtaacaatt ccttcacaaa       180
     gcaaagtatg aatcaaaaac cttaccgaga agtagccaac aacagtccat agtcattgaa       240
     gaaattgcaa tttatcataa catcagaaag aggcaaataa gagcttgtaa agcaaatcca       300
     catactcaat cgtctctttt gttttccaca attgttacaa ttcacgtggt actcatggta       360
     tcaagtttca gttggacaca gagaaagata ggggcttata attttgcctc ccaaccattt       420
     acctcaaggg taaagtcaac aataataaag cacaagtact catctccaag ttgatatatg       480
     aatatagatc tttccctagc atatgacgtt caccaagatg aagacgtaat agggaattgg       540
     tgttgatcac catgactttc acaaggacaa aagtaaaggt acaagatagt cccttcgtag       600
     agggaagcag aggttgtcat gcgcttctaa ggtttggata tacgacctct tagtgtaaag       660
     gaacatcact ttatattgcc cctgtgataa agaactttat tatgcagtct gtcgctttta       720
     tgtcttcctc atcacaggtt cgtacaagct taagcttatt ttccacgcac taataaatca       780
     tacatacttt agataacaac tttttattgc ttgcaccgat gacaacttac ttgaaggatc       840
     ttacgcaatc cataggtagg tatggtggac tctcatggca aaactgggtt gaaggttcat       900
     ggatgcacaa gttgtatttc tacttagtat ggaagttttg gctaatatga ggtggaagca       960
     atcgtcacat gctaagggat ctctagacat ataacattgt ttggaaccaa gcaaacacaa      1020
     ttcattatgt tgtcttcctt gtccaacatc tacttctaag catgtaatag tttggtgagt      1080
     gctcacaatt atagaaagtg tctaagatga tatatttata tgtgaacctc tctttcctta      1140
     ttacttctta ttaattgcaa caatgactgg ggtctatgtt ggtctattct caacaagttt      1200
     caatcatcat acttgttata tgtgaagcta tcactttcca taagatcatc tcatgatctt      1260
     tcatgctatc gttcttttca tacttttgat cacggcacaa aacaaagccc ttaactaaga      1320
     tactctttat tatatagctc gcaagctcga atacatcggg ggagacacaa ggcaaaagac      1380
     tcaaactaaa cactaaagac ttatcccact aagagaagaa agtaaaaact gaaaaagaaa      1440
     gaactaaaac aaaggtaaaa gaaaaagata taaaggtgat acgataccag ggcgactccc      1500
     tcaagcttgg aaaaatccaa ggggattgcc cataccaatg ctcagttgtc ttcctttggt      1560
     ggtggcggag gagttgttgc agaggtcttg agcttgtcta atttccactt gagcatgaaa      1620
     ttccgctctc tcagataatc attttcctcc tcaagcttca acaccctttg acaaagttcc      1680
     tgcttactct cctgcaagaa atgagaaggg ataaacaagt tcttaggctt cctccttgag      1740
     tcagggaggc tcgacttctt gaactccaca tgagtgcgtc caggttgagg tagaggagcc      1800
     tcctcttcat cggaactcgt ttgttccttc cccttgggat catagtcctc ttactcatca      1860
     gtggtccagc catatggttc caagtcccca tagaccttgg ggttagcaag gtattcagcc      1920
     acatagctct cccccctgtg aatcttgaga agacatcttg acctagatct gcggcagaaa      1980
     ataggctcga aacaaaaaaa ccagaggaaa actgcgcgat acggagatca aaaccctcgg      2040
     gcgtatatat aatgattttt ttggacgaga aggagtgctt cgcaagaaaa cggagtccgg      2100
     gaggcacacg aggtgcccac aagcactgta gccgcgacca gggggaggcc gcggctacca      2160
     agcttgtggc cgcctcgtgc gctctccgga ctgcttttta tttttctatt tttccataaa      2220
     ttccaaaacg aagaaaattt cctactggaa aagttttgga gtccaattac ttaccgaaac      2280
     acatacctct tcgttttcag agtctgaaac aggccgataa acatccctta cgtactcctc      2340
     tcgagttatg atattgatga tattgctctc aacatttatg ggagtaccag agatataatg      2400
     cttgattctt tgcccattta ccactctagg aaaattacct tatgtgttat tgaatttgat      2460
     ggcatcagaa cgatatactt cctcgacaac gtagggacct tcccatttag agagaagctt      2520
     gcctgcgaag aatcttaagc gagaattgta tagcaggaca taatcaccta cattgaactc      2580
     acgtttttgt attctttttt cgtgccatct cttaaccttt tccttgaaca acttggcatt      2640
     ctcatatgcc tgggccctcc attcatctaa tgagctgata tcaaacaacc gcttctaacc      2700
     ggcaagtttg aaatcgaggt tgagctcttt gattgcccaa taagctttgt gttctagctc      2760
     aagaggtaaa tgacaggcct taccgtaaac cattttatac ggcgacatgc ccatgggatt      2820
     ccagtcctat aagcccatag tgcatcgtca agtttgctag accaattctt tcgagatcta      2880
     ttgacagtct tttgtaagat caatttgatc tccctattac tcaactccac ttgaccacta      2940
     gactgaggat gataaggaga tgcaactcta tggttgacat catacttagc gagcatattg      3000
     cggaaaacac catgaatgaa gtgtgaaccg ccatcagtca tcagatatct agggactcca      3060
     aatcttggga aaatgacctc tttaagcatc ttaatagagg tgtggtgatc aacatttcta      3120
     gtggggatag attctaccca cttactgacg taatcaacag caactaagat gtgagtatac      3180
     ccattggaat tcgggaaggg tcccatataa tcaaagcccc aaacatcaaa tggttcaatg      3240
     acaagtgaat agttcatagg catttcctga cgtttactga tgttccctat tctttggcat      3300
     tcgtcacaag acaagacaaa cttacgggca tccttgaaga gagtgggcca atagaaacct      3360
     gattgcaata ccttatgagc aattctatct ccagcatggt gccctccgta ggctttggaa      3420
     tgatacttct gtaggatctg ttcatgttca tgttcaggca cacaacgtct aataacacca      3480
     tctactcctt ccttataaag gtgaggatca tcccaaaagt agtgtctcaa atcaaagaag      3540
     aattcctcct tttgctggta ggtgaaactg ggtggtatgt atttggctac gatatagttt      3600
     gcgtaatcag cataccacgg tgcactatgt gaagtgcgga tgacattcaa ttgctcatcg      3660
     ggaaagttgt catcaatagg tcgtgggtca tcaaggatat tctctagcct ggacaagtta      3720
     tctgctacag ggttatcagc accctttcgg tcaacaacgt gcaaatcaaa ttcatgtagc      3780
     aggagaaccc atctgattag cctaggctta gcattcttct tctccataag gtacttaata      3840
     gcagcatgat cagagtgaat aatgactttg gagtcaacta tataagatct gaacttttca      3900
     catgcaaaca cgactgctaa aaattccttg tccgtagtgg catagtttct ttgggcactg      3960
     tctagagttt tactagcgta gtgaatgaca ttcaacttct tgtcaactct ttgtcctaga      4020
     acaacaccaa caacataatc actagcatca cacatgattt caaagggcaa gttccaatca      4080
     ggtggttgaa caataggtgc ggttatcaag gccttcttaa gtatttcgaa agcttcctca      4140
     caatcctcat aaaaaacaaa aggaacatcc ttctgcaaga gattggtaag aggcctagaa      4200
     atcttagaga agtctttaat gaaccttcta tagaaaccag catgacctag gaaacttcgt      4260
     atacctctga tatctatggg gcaaggcatt ttttcaattg catcaacctt agccttatca      4320
     acttcaatgc ctttctcaga gattttgtgt cctaagacga tgccttcatt aaccatgaag      4380
     tggcacttct cccaattcaa gacgaggttg gtatctttgc atctctgtaa gaatcgatca      4440
     aggttgctga ggcaatcgtc aaaggaagaa ccgtaaacgg agaaatcatc catgaaaacc      4500
     tcaacaatct tttcacaaaa gtcagaggat attgccatca tacatctttg aaaggtggca      4560
     ggtgcattgc ataagccaaa aggcataagt ctataagcaa aggtaccgaa ggggcaagtg      4620
     aaagtggttt tctcctgatc agattgtgca acaggtattt gcgagaaacc tgaataaccg      4680
     tctagaaagc agaagtgtgt gtgtttagat agcctttcta gcatttggtc gataaacgac      4740
     aaaggataat ggtctttcct ggttgccttg ttcagtttcc ggaagtctat caccatccta      4800
     tagccagtaa taatcctttg tgggattagt tcattcttat cattaggaac gacggtgata      4860
     cctctcttct taggtacgca atgtaccgga cttacccaat cactatgagc aacaggataa      4920
     atgattcctg cttccagaag ctttaatatt tcttttctca caacctcttt catcctagga      4980
     tttaacctcc gttgatgatc agcaactggc ttagaatcag gatcggtttt aatcttgtgt      5040
     tgacatagag tgggactaat acccttaaga tcatcaagag tatatccaat agcagcacgg      5100
     tgcttcctca aagtttataa taacttattc tcttcgtgat tcgagaggtg agcactaata      5160
     ataacaggat atatctcctt ctcatcaaga taggcatact taagtgtatc tggtaactgt      5220
     tttagctcga acacgggatc accctttggt gggggaggat ccccaagcag ttcaacaggc      5280
     agattattct taagaatagg atattcttct aaaacaattt tatctatctc atctctttca      5340
     tccatatgca tatcattttc atgctcaagc agatatttct ctaaaggatc tgtaggagcc      5400
     acgacaatag aggcaagagc aatgatttca tccctaccaa atgactcttt ttcatggggt      5460
     tgtcttccaa actagaagaa gttaaattca tgagacacac cctcgaaact aacagtgaca      5520
     gtctgtttaa cgcaatcaat atgagcattg acagtgttga gaaagggtct accaaatatg      5580
     atgggataaa agctatcttg tgcagtagca aggacgagga aatgagtagg atacttcgtc      5640
     ttaccacaca agactcctac atctctcaca attcccacag ggcacatagt gtctctatta      5700
     gctagcgtaa tagtgacatc aatgggttct aactcagaag gtgcaatctc atctttgatt      5760
     tcatcatata gggaccgggg tattgcacta acactagcat ccatatcaca taaaccatga      5820
     taacagtgat ctcctatctt gacagaaaca acgggcaggc caactatagg tttgtatttg      5880
     tcttttgcgt gaggttcagc aattctagcg gagtccccac agaatttgat aacatgcccg      5940
     tctatgtctt cggctaagag atctttgata atagcaacac taggttcaac tctaatttcc      6000
     tcagggggtg caagtggtct aatgtaaccc ctacgtatca cagttggagc tttagaataa      6060
     tcctttttcc tagcagggta aggtggtttc tcagtgtagg cacaaggaac aataggatca      6120
     ttatagacaa tgactttctc ttcaactaga ttgggtttaa ctatgttgac ttatatagta      6180
     ggatgatact taaaccactt ctctttggga agatcaatat gagcagcaaa agattcacaa      6240
     agagaagcta ctatctcata gtcaagtcca tacttagcgc taaaatctct cgaagtattt      6300
     gtttcaacaa aatatttaac gcaatcaaac tggaaattca tacctgactc cttaccttct      6360
     tcaagctccc aatcttcaga gttacgtttg attctttcca ataaattcca cttgtggtca      6420
     atatccttcc tcataaaaga accggtacaa gaagtgtcaa gcatggtacg atcttcatgg      6480
     gaaaggtgag cataaaagtt ttgagtgata atttctctcg agagctcatg attggggcat      6540
     gaatatagca ttgatttaac cct                                              6563
//
ID   BAGY2_HV_LTR repbase; DNA; PLN; 1523 BP.
CC   BAGY2_HV_LTR DNA
XX
AC   AF254799;
XX
DT   16-OCT-2002 (Rel. 4.3, Created)
DT   16-OCT-2002 (Rel. 4.3, Last updated, Version 1)
XX
DE   Hordeum vulgare gypsy-type retrotransposon, BAGY2_HV_LTR,
DE   long terminal repeat.
XX
KW   Long terminal repeat; retrotransposon; GYPSY superfamily; TREP206;
KW   BAGY2_HV_LTR.
XX
OS   Hordeum vulgare
CC   Hordeum vulgare (barley)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Pooideae;
OC   Triticeae; Hordeum
XX
RN   [1]
RP   1-1523
RC   [1]
RA   Shirasu K., Schulman A.H., Lahaye T., Schulze-Lefert P.;
RT   "A contiguous 66 kb barley DNA sequence provides evidence for reversible
RT   genome expansion.";
RL   Genome Res. 2000 Jul;10(7):908-15.
RL   PUBMED  10899140
RX   MEDLINE; 20359834.
XX
RN   [2]
RP   1-1523
RC   [2]
RA   Wicker T.;
RT   "Direct Submission";
RL   Submitted to TREP database.
XX
RN   [3]
RP   1-1523
RC   [3]
RA   TREP;
RT   "Direct Submission";
RL   Submitted (02-APR-2002) to Repbase Update
XX
DR   GENBANK; AF254799.
CC   Positions  11758  13280  Accession No AF254799    GenBank
XX
SQ   Sequence 1523 BP; 481 A; 341 C; 338 G; 363 T; 0 other;
     tgatgaccca caagtatagg ggatcaatca tagacctttc gataagtaag agtgtcgaac        60
     ccaatgagga ggagcaggct ctcataaacg gttttcagca aggtaataac tgcaagcact       120
     gaaagtagcg gtaacaagtg atcgtgtagt gaggtgaaac gtagctagcg aaaagtaaca       180
     aggaacaagc agtagcaacg gtgcagcaag tggcccaatc ccttttgtag caagggacaa       240
     gcctgaacaa agtcttataa gaggaaaaac gctcccgagg acacacggga atttctatca       300
     tgctagtttc atcatgttca tatgattcac gtttgttact ttgatggttt gatatgtggg       360
     tggaccggcg cttgggtact acccttactt ggacaagcat cccacttatg attaacccct       420
     ctcgcaagca tccgcaacta tgaaagaaga attaagacaa cgtctaacca tagcattaaa       480
     ctagtggatc caaataagcc ccttacgaag caatgcatag actggggttt aagcttctgt       540
     cactccagca acccatcatc tagttactac tccccaatgc cttcctctag gcccaaatat       600
     ggtgaagtgt tatgtagtcg atgttcacat aacaccactg gaggaaaaac aacatacaac       660
     atatcaaaat accgaatgaa taccaaattc acatgactat tattagcatg acttatccca       720
     tgtcctcagg aacaaaagta actactcaca aagcataatc ataatcatga tcagaggtgt       780
     aatgaatagc atcaaggatc taaacataaa ctcttccacc aagtaatcga actagcatca       840
     actacaagga gtaatcaaca ctactagcaa ccttctaagt accaatcgga gtcgcgagac       900
     ggagattggt tacaagagat gaactaggga cttgagagga gatggtgctg atgaacatgt       960
     tgatggagat gcctcccctc cgatgagagg agtgttggtg atgacgatgg cgacgatttc      1020
     cccctgcggg agggaagttt ccccggcagg atcgtcgtgc cggagctcta gattggatct      1080
     gctcaagttc cgcctcgtgg cggcgaagaa tccacgaaaa agctctaccc gggtcttctt      1140
     ctgagaccaa ttccataggc cctgagggtg cacgtgggcc accagggtgc ccacaagcaa      1200
     tattgcggga aagaagtgtt agacgggagc aaccaggctt gtggccccct ggttgctccc      1260
     ctctaacact tctttcaccc agtatttttt atatattcca aaaaaatcca cgttgatttt      1320
     cagggcattt ggagttgcgc agaatagagg actcatactt gctccttttc tagtccagaa      1380
     ttccagctgc cggtattctc cctattcaaa taaaccttgc aaaataagag agaaaaggta      1440
     taagtaaggt tccacaaagt gtaataatag tccataaagc gataaatatc aacatgaaag      1500
     catgatgcaa aatggatgca tca                                              1523
//
ID   PREM2_ZM_I repbase; DNA; PLN; 6933 BP.
CC   PREM2_ZM_I DNA
XX
AC   AF090447;
XX
DT   08-NOV-2002 (Rel. 4.3, Created)
DT   08-NOV-2002 (Rel. 4.3, Last updated, Version 1)
XX
DE   Zea mays copia-type retrotransposon PREM2_ZM_I, internal region.
XX
KW   LTR retrotransposon; COPIA superfamily; internal region;
KW   target site duplications; PREM2_ZM_I.
XX
OS   Zea mays
CC   Zea mays (maize)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC   PACC clade; Panicoideae; Andropogoneae; Zea
XX
RN   [1]
RP   1-6933
RC   [1]  (bases 80292 to 116863)
RA   Song R., Llaca V., Messing J.;
RT   "Direct Submission";
RL   Submitted (04-SEP-1998) to GenBank
XX
RN   [2]
RP   1-6933
RC   [2]  (bases 1 to 65155)
RA   Llaca V., Lou A., Young S., Messing J.;
RT   "Direct Submission";
RL   Submitted (10-NOV-1998) to GenBank
XX
RN   [3]
RP   1-6933
RC   [3]  (bases 1 to 346296)
RA   Song R., Llaca V., Messing J.;
RT   "Direct Submission";
RL   Submitted (12-APR-2001) to GenBank
XX
RN   [4]
RP   1-6933
RC   [4]  (bases 1 to 346296)
RA   Song R., Llaca V., Messing J.;
RT   "Direct Submission";
RL   Submitted (24-APR-2001) to GenBank
XX
DR   GENBANK; AF090447.
CC   Positions  52002  58934  Accession No AF090447    GenBank
XX
SQ   Sequence 6933 BP; 1766 A; 1541 C; 1455 G; 2171 T; 0 other;
     aagatttgtg ttgggcaatt caaccaccaa aattatatag gaacaaggtg taagcctaat        60
     tccctttcaa tctccccctt tttggtgatt gatgccaaca caaaccaaag caaatataga       120
     agtgcataat tgaactagtt tgcataaaat aagtgcaaag gttgcttgga atttagccaa       180
     tatgactact tacaagatat gcaaggaatg tttctttctt atattacatt ttggaccacg       240
     tttgcaccac ttgttttgtt tttgcaaatt ctttttgtaa atccatttta aagatctttt       300
     gcaaatagtc aaaggtacat gaataagagt ttgcaaagca ttttcaagat ttgaaattgt       360
     ctccccctat ttcaaatgct tttcctttga ctaaacaaaa ctccccctaa aagagatcca       420
     cctcttagtg ttcaagaggg ttttgatata ccatttttga aatactactt tctccccctt       480
     ttgaacacaa taggatacca gatgataaag acttttggaa agcactaagt ttttgaattt       540
     ggtggtggtg cggtcctttt gctttgggct catttctccc cctttttggc atgaatcgcc       600
     aaaaacggaa tcattagagc cctctgaagt gcaatcttcc cctttggtca taaataagtg       660
     agttaagatt ataccaaaga cgaagtcctc ttgcgtttga gcttttactc tctcccccaa       720
     ggatgaagtc cttttctttg atgctcattt ctcccccaaa gaagagagag ttgctcggag       780
     tggtggcgaa gtatgagttg cggagtagaa gcctttgtct tcgccgaaga ctccaattcc       840
     ctttcaatat acctatgact tggtttgaaa tagacttgaa aacacattag tcatagcata       900
     taaaagagat atgatcaaag gtattcaaaa gagctatgtg tgcaagctta gcaaaagaaa       960
     tttctagaat caagaatatt gagctcatgc ctaagtctgg taaaagattg ttcatcaagt      1020
     ggcttggtaa agatatcggc taattgatct ttagtattaa tgtaagaaat ctcgatatcc      1080
     cccttttgtt ggtgatccct aagaaaatga taccgaatgg ctatgtgctt agtgcgacta      1140
     tgctcgacgg gattgtcggc cattttgatt gcactctcat tatcacatag caaagggact      1200
     ttggttaatt tgtaaccgta gtccagcagg gtttgcctca tccaaagcaa ttgcgcgcaa      1260
     caatgtcctg cggcaatgta ctcggcttcg gcggtggaaa gagcgaccga attttgcttc      1320
     tttgaagccc aagacaccaa ggatcttccc aagaactggc aagtccccga tgtgctcttc      1380
     ctattgattt tgcaccccgc ccagtcggca tccgaataac caattaaatc aaatgtggat      1440
     cccctagggt accaaagccc aaacttagga gtataagcca gatatctcaa gattcgtttt      1500
     acggccgtaa ggtgtgattc cttagggtcg gattggaatc ttgcacacat gcaaacggaa      1560
     agcataatgt ccggtcgaga tgcacataaa taaagcaatg aaccaatcat cgaccggtat      1620
     accttttgat ccacggactt acctcccgtg tcgaggtcga gatgcccatt agttcccatg      1680
     ggtgtcttga tgggtttggc atccttcatc ccaaacttgg ttagaatgtc ttgagtgtac      1740
     tttgtttggc aaatgaaggt gccctcttgg agttgcttga cttggaatcc tagaaaatac      1800
     ttcaactccc ccatcattga catctcgaat ttctgtgtca tgatcctact aaactcttca      1860
     catgtagact tgttagtaga cccaaatata atatcatcaa cataaatttg gcatacaaac      1920
     aagtcatttt caagagtttt agtaaagagt gtaggatcgg ccttgccgac tttgaagcca      1980
     ttagcaataa ggaaatctct aaggcattca taccatgctc ttggggcttg cttgagccca      2040
     taaagcgcct tagagagcct atagacatgg ttagggtact cactgtcttc aaagccggga      2100
     ggttgctcaa catagacctc ttccttgatt ggtccgttga ggaaggcact tttcacgtcc      2160
     atttgataga gcttaaagcc atggtaagta gcataggcca ataatatgcg aattgactca      2220
     agcctagcta cgggtgcata ggtttcacca aaatccaaac cttcgacttg tgaataccct      2280
     ttggccacga gtcgagcttt gttccttgtc accactccat gctcatcttg cttgttgcgg      2340
     aagacccatt tggttcctac aacattttgg ttaggacgtg gaactaagtg ccatacctca      2400
     ttccttgtga aattgttgag ctcctcttgc attgccacca cccaatccga atcttggaga      2460
     gcttcctcta ccctgtgtgg ctcaatagag gaaacaaaag agtaatgttc acaaaaatga      2520
     gcaacccgag atcgagtagt taccccctta tgaatgtcgc cgaggatggt gtcgacgggg      2580
     tgatctcgtt ggattgcttg gtggactctt gggtgtggcg gtcttggttc ttcctcatcc      2640
     tccttttctt gatcatttgt atctccccct tgatcattgc tatcatcttg aggtggctcg      2700
     tcttcttgat tttgctcttc atcattttga gcctcatcct cattttgagt tggtggagat      2760
     gcttgcatgg aggaggatgg ttgatcttgt gtacttggag gctcttcgga ttccttagga      2820
     cacacatccc cgatggacat gttccttagt gcgatgcatg gagcctgttc ttcacctatc      2880
     tcatcaagat caacttgctc cacttgagag ccgttagttt catcaaacac aacgtcacaa      2940
     gagacttcaa ctagtccagt ggacttgtta aagaccctat atgcccttgt gtttgagtca      3000
     taaccaagta aaaagccttc tacagtttta ggagcaaatt ttgattttct acctctttta      3060
     ataagaatga agcatttgct accaaaaact ctaaaatatg aaatgttggg ctttttaccg      3120
     gttaggagtt catatgatgt cttcttgagg attcggtgaa gatataaccg gttgatggcg      3180
     tagcaggcgg tgttgaccgc ttcggcccaa aaccggtccg gtgtcttgta ctcatcaagc      3240
     atggttcttg ccatgtccaa tagagttcga ttcttcctct ccactacacc attttgttgt      3300
     ggcgtgtagg gagaagagaa ctcatgcttg atgccctcct cctcaaggaa gctctcaatt      3360
     tgagagttct tgaactccgt cccattgtcg cttcttattt tcttgatcct taagccgaac      3420
     tcattttgag ctcgtctcaa gaatcccttt aaggtctctt gggtttgaga tttttcctgt      3480
     aaaaagaata cccaagtgaa gcgagaataa tcatccacaa taactagaca gtacttactc      3540
     ccgccgatgc ttatgtaagc gatcgggccg aatagatcca tgtgtaggag ctccagtggc      3600
     ctgtcagtcg tcattatgtt cttgtgtgga tgatgagtgc caacttgctt ccctgcttgg      3660
     catgcgctac aaatcctgtc tttctcaaaa tgaacattgg ttagtcctaa aatgtgctct      3720
     ccctttagaa gcttatgaag attcttcatc ccaacatggg ctagtcggcg gtgccagagc      3780
     caacccatgt tagtcttagc aattaaacat gtgtcgagct cagctctatc aaaatctact      3840
     aagtatagct gaccttctaa cacaccctta aatgctattg aatcatcact tcttctaaag      3900
     acagtgacac ctatatcagt aaaaagacag ttgtagccca tttgacataa ttgggaaaca      3960
     gaaagcaagt tgtaatctaa tgaatcaaca agaaaaacat tggaaatgga atggtcaggt      4020
     gaaatagcaa ttttacccaa acctttgacc aaaccttgat ttccatcccc gaatgtgata      4080
     gctcgttggg gatcctggtt tttctcatat gaggagaaca tccttttctc cccggtcatg      4140
     tggtttgtgc atccgctgtc gagtatccaa cttgtgcccc cggatgcata aacctacaaa      4200
     acaagtttag ttctttgttt taggtaccca aacggttttg ggtcctttag cattagatac      4260
     aagaactttg ggtacccaaa cacaagtctt ggagcccttg tgtttgcccc caacaatttt      4320
     ggcaactacc ttgccagatt tgctagtcaa cacataagat gcatcaaaag ttttaaatga      4380
     aatggcatga tcatttgatg cattaatagt tttctttcta ggcaacttgg catgggttgg      4440
     ttgcctagat ctagatgtct cacccttata cataaaagca taattagggc cagagtgaga      4500
     cttcctagaa tgaattttct taatcttatt ctcaggatac ccggcagggt acaaaatgta      4560
     accctcgtta tcctgaggca tgggagcctt gcccttaaca aagttagaca agttcttagg      4620
     aggggcatta attttgacat tgtctcccct ttgaaagcca atgccgtcct taatgcccgg      4680
     gcgtctccca ttatagagca tgcttctagc caatttaaat ttttcatttt ctaagtcatg      4740
     ctctctaatt ttagcattaa gttgtgctat gtgatcattt tgttttttaa ttaaggcaag      4800
     gtgatcatgg atagcatcaa cattaatatc tctacatcta gtgcaaatgg acacatgctc      4860
     aatagtagat gtagagggtt tgcaagactt taattcaata accttagcat gcaacaaatc      4920
     attcttagtt ctaaggtcag aaatagtagt attgcaaaca tcaaaatcct tagccttagc      4980
     aattaatttc tcattctcat ttctaaggct agcgatggaa gcattcaatt catcaatcct      5040
     agcaagcaaa tcaacatcat tatttctagg atcaatgcaa acatgagaat caaccttagc      5100
     caacaaatta gcattttcat ttctaaggtt gtctaaaatc tcatggcaag tgcttagctc      5160
     actagataat ttttcacatt tttctctttc tagagcataa gcatttttaa ccttaacatg      5220
     tttcttgttt tccttgatta ggaagtcctc ttgggagtcc aagagatcat ccttttcatg      5280
     gatagcacta attagctcat ttaatttttc tttttgttcc atgttaaggt tggcaaaaag      5340
     aatacgcaag ttatcctcct catttttatc atcctcatca ctagatgttt catatttagt      5400
     ggaggacttt gattttacct tctttttgcc gtccttggcc atgaggcact tgtggccgac      5460
     gttggggaag aggaggcctt tggtgatggc gatgttggcg gcgtcctcgt cgtcggagga      5520
     gtcgcttgag ctttcgtcgg agtcccactc ccgacaaaca tgggcatcgc cgcccttctt      5580
     cttgtagtac ttcttctttt ccttcctctt gcccttcttg tcgttgtccc tgtcactatc      5640
     acttgataat ggacatttag caatgaagtg accgggctta ccacacttgt agcaaacctt      5700
     cttggaacgg gatttgtagt ccttcccttt ccgttgcttg aggatttgcc ggaagctttt      5760
     gatgattagg gccatctcct cgttgtcgag cttggaggcg tcaattggtt gtctacttgg      5820
     tgtagactcc tcctccgttg ccttgaaggc cacgggttgc gcctcggatg tggaaggctc      5880
     atcaagctca ttgatcttct tggagccctt aatcatgcat tcaaagctaa caaaattccc      5940
     gatgacttcc tcgggggtca ttagtggata tcttggatta ccacgaatta attgaacttg      6000
     tgtggggtta aggaaaataa gagctcttag aataacctta accacttcgt ggtcatccca      6060
     ttttgtgctt ccgaggttgc gcacttggtt caccaaggtc ttgagccggt tgtacatgtc      6120
     ttgcggctcc tccccttggc gaagacggaa gcgaccgagc tccccctcga tcgtttcccg      6180
     cttggtgatc ttggtgagtt catcaccctc gtgcgccgtc ttgagtaggt cccaaatctc      6240
     cttggcgttc ttcaatcctt gtactttgtt gtattcctcc ttgcttaggg aggcaaggag      6300
     gatggttgcg gcttgggagt tgaagtgctc gatttgggcc acttcgtccg tgtcatagtc      6360
     ctcatcccct attgatggta cctgtacacc atactcaaca acatcccata ttcttttgtg      6420
     gagagaggtt agatgaaatc gcatcaaatt actccacata gcataatctt caccattaaa      6480
     agttggtggt ttgcctaatg ggacggaaag taaaggtgta tgtttaggaa tgcgagggta      6540
     gcgtaggggg atcttactat acttcttgcg ctcttggcgc ttagaagtga cggacgccgc      6600
     gtcggagccg gaggtggagg tcgatgaagt gtcggtctcg tagaagacca ccttcctcat      6660
     ccttttgtgc ttgtccccac tccgatgcgg cttgtgagaa gatttttcct tcttctcctt      6720
     atggtgagaa gaggaagatc ttttctcctt ccgcttggag gatttctttt tcttctctct      6780
     tctcttggtg cgggactctt tcgatgaaga tgaagtgctc ccttggcttg tagtgggctt      6840
     gtcgtcgccg gtctccatct ccttcttggc gtgatctccc gacatcactt cgagcggtta      6900
     ggctctaatg aagcaccggg ctctgatacc aat                                   6933
//
ID   PREM2_ZM_LTR repbase; DNA; PLN; 1427 BP.
CC   PREM2_ZM_LTR DNA
XX
AC   AF090447;
XX
DT   08-NOV-2002 (Rel. 4.3, Created)
DT   08-NOV-2002 (Rel. 4.3, Last updated, Version 1)
XX
DE   Zea mays copia-type retrotransposon PREM2_ZM_LTR, long
DE   terminal repeat.
XX
KW   Long terminal repeat; retrotransposon; COPIA superfamily;
KW   target site duplication; PREM2_ZM_LTR.
XX
OS   Zea mays
CC   Zea mays (maize)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC   PACC clade; Panicoideae; Andropogoneae; Zea
XX
RN   [1]
RP   1-1427
RC   [1]  (bases 80292 to 116863)
RA   Song R., Llaca V., Messing J.;
RT   "Direct Submission";
RL   Submitted (04-SEP-1998) to GenBank
XX
RN   [2]
RP   1-1427
RC   [2]  (bases 1 to 65155)
RA   Llaca V., Lou A., Young S., Messing J.;
RT   "Direct Submission";
RL   Submitted (10-NOV-1998) to GenBank
XX
RN   [3]
RP   1-1427
RC   [3]  (bases 1 to 346296)
RA   Song R., Llaca V., Messing J.;
RT   "Direct Submission";
RL   Submitted (12-APR-2001) to GenBank
XX
RN   [4]
RP   1-1427
RC   [4]  (bases 1 to 346296)
RA   Song R., Llaca V., Messing J.;
RT   "Direct Submission";
RL   Submitted (24-APR-2001) to GenBank
XX
DR   GENBANK; AF090447.
CC   Positions  50575  52001  Accession No AF090447    GenBank
XX
SQ   Sequence 1427 BP; 321 A; 366 C; 406 G; 334 T; 0 other;
     tgatagtcgc ctagaggggg ggtgaatagg gcgaaactga aatttacaaa aataatcaca        60
     actacaagcc ggggttagcg ttagtaataa taaatgagtc cgcaagagag ggcgcaaaac       120
     aaatcgcaag caaataagga gagtgacacg tggatttgtt ttaccgaggt tcggttcttg       180
     caaacctact ccccgttgag gaggccacaa aggccgggtc tctttcaacc cttccctctc       240
     tcaaacggtc cctcggaccg agtgagcttt ccttcttctc aatcaaccgg gaacaaaact       300
     tccccgcaag ggccaccaca caattggtgc ctcttgcctc ggttacaatt gagtgttgat       360
     cacaagagca caagagaaag aaagaatgcg atccaagcgc aagagctcaa aagaacacgg       420
     caaatcactc tctctggtca ctagggtttt gtgtggaatt ggagaggatt tgatctcttt       480
     gaatgtgtct agaattgaat gtctagctct tgtaagtggt tgagaagtgg aaaacttgga       540
     tggcaatgaa tgtggggtgg ttggggtatt tatagcccca accaccaaat gtggccgttg       600
     gggagccagt ctgctcgatg gcgcaccgga cagtccggtg cacaccggac atgtccggtg       660
     cccctgccac gtcatcagta ccgttggaat ctgaacgttg gagttctgac ttgtgggcca       720
     cccttgatgt ccggtggcgc accggacagc tggttggggt atttagcccc aaccaccaaa       780
     tgtggccgtt ggggagccag tctgctcgat ggcgcaccgg acagtccggt gcacaccgga       840
     catgtccggt gcccctgcca cgtcatcagt accgttggaa tctgaccgtt ggagttctga       900
     cttgtgggcc acccttgatg tccggtggcg caccggacag ctcctgttca ttgtccggtg       960
     cgccagtatg ggcaatcctg acgtctgcgc gcgctgcggc gcatttaatg tctctgcagg      1020
     tagccgttgg cgcgggatag ccgttgcact ggagtcacac cggacagtcc ggtgcacacc      1080
     ggacatgtcc ggtgaattat agcggacgag ccgttggctt ttcccgaagc tgaagagttc      1140
     ctgaggccgc ctctccatgg cgcaccggac actgtccggt gtacaccgga cagtccggtg      1200
     aattatagag cgagggcccc tggaaatttc cgaaggtggc gagttcgagc tggagtcccc      1260
     tggtgcaccg gacactgtcc ggtggtgtgt ccggtgcgcc cagaccagag ggccttcggt      1320
     tggctctttg cccttttgtt gaacccaaca cttggtcatt ttattggcta tgttgtgaac      1380
     ctttgacacc tgtataactt atacactaga acagactagt tagtcca                    1427
//
ID   ARS_TA    repbase; DNA; PLN; 371 BP.
CC   ARS_TA DNA
XX
AC   X59858;
XX
DT   08-NOV-2002 (Rel. 4.3, Created)
DT   08-NOV-2002 (Rel. 4.3, Last updated, Version 1)
XX
DE   Triticum aestivum ARS-related dispersed repetitive DNA, ARS_TA.
XX
KW   Repetitive sequence; dispersed; autonomous replication; ARS_TA.
XX
OS   Triticum aestivum
CC   Triticum aestivum (bread wheat)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Pooideae;
OC   Triticeae; Triticum
XX
RN   [1]
RP   1-371
RC   [1]  (bases 1 to 371)
RA   Dobrzanska M., Szurmak B.;
RT   "A moderately repeated DNA sequence of wheat and rye genomes";
RL   Plant Mol. Biol. 1992 Feb;18(3):603-5.
RL   PUBMED  1536934
RX   MEDLINE; 92163027.
XX
CC   repeat_unit     141..147
CC                   /note="ARS consensus 5'-domain"
CC   repeat_unit     223..229
CC                   /note="ARS consensus 5'-domain"
CC   repeat_unit     265..271
CC                   /note="ARS consensus 5'-domain"
CC   repeat_unit     289..295
CC                   /note="ARS consensus 3'-domain"
XX
DR   GENBANK; X59858.
CC   Positions  1  371  Accession No X59858    GenBank
XX
SQ   Sequence 371 BP; 127 A; 66 C; 53 G; 125 T; 0 other;
     aagctttagc atgatccttt attctaaaag gaaaaggtgg tttctcaata taagcggtag        60
     aacaatagga tcaacattat aagtaatagt tttttcttca actataatag gttctactcc       120
     tttacttcaa tgggaggatg atatttaaac cacttctcct tagggagatc acatgagtag       180
     caaaagattc gcagaaagag ctactatctt agagtcaagt ccatatttag tgctaaattc       240
     atgaaaagca tcagtatcca taaaatattt aacacaatca aacttaagat ttatacctga       300
     ctccttacct tcttgagttc ccaatcttca gatttgcgtt taattatttc caataaatct       360
     catttgaatt c                                                            371
//
