>B1   Mouse B1 repetitive sequence - a consensus.
gccgggcatggtggcgcacgcctttaatcccagcacttgggaggcagaggcaggcggatttctgagttcg
aggccagcctggtctacanagtgagttccaggacagccagggctacacagagaaaccctgtctcg
>B2   Mouse B2 repetitive sequence - a consensus.
gggctggagagatggctcagtggttaagagcacctgactgctcttccagaggtcctgagttcaattccca
gcaaccacatggtggctcacaaccatctgtaatgagatctgatgccctcttctggtgtgtctgaagacag
ctacagtgtacttacatataataaataaataaataaataaatcttaaaaaaaaaaaaaagaaagaaaaa
>BC1   BC1 (identifier) repetitive sequence - a consensus.
ggggttggggatttagccagtggtagagcgcttgcctagcaagcgcaaggccctgggttcggtcctcagc
tcttgg
>BGLII   Mouse Bgl II repeat fragment (clone 51B).
tgttagggatacttggggctaattatatttgatgttaattctgttctcctgtgagtggtagtgaacaagg
aatgagtcagcacccaggtgattccctgtaaacctgcttcccaccttaatttgtaaaataaaggagagct
gatgattgggcagataaaaggtaaggtggagtggagggtgggggatgaaggagaaagtggaagaggaaga
gaatgcagaggaggaggaagacaaagaaaagcagagcagaagcacttggccaggagaaactgcaagttct
aaggggtctcataagctgtggaagatggtaatgtagcgatagatct
>L1_CC   Guinea-pig LINE repeat sequence.
aagctttttaacaagatgagcttccagttgttgattttttgtgaacgtttctatgcaacagaagttttgt
tcatgaagtcttttgcctataccaatgtcttcaagagttctacctagtctatcttccagcaggtttaaca
tttctgttttaatacttaggttttgattcatttcaattttagtttagagtgtggtgaaagatgtgggtat
aattttaatcttcagcatgtggaaagccaatttttccagcaccatttactaaagaggcttttttccagca
aaggtgtttggcttttttgtaaaaaataaaggggctgagtgtgttggagttgtctctgtatcttctaacc
tgttccactattccttgggtctgtttttttgccagtaccatgctgtttttatcacagtagctttatggta
taatttcaagtcagggtgggtgatgcccccttcttggtctttgttgcccataatttcctgtactattata
ggtctcttctggttccaaatgaattttataatttctctaattctgcaagatatgctcttggaattttaat
cagaattgcattaaatctgtataatgattttgaaagcatggccattttcactattggttcttcctactca
agagcaagggatttcttcccattttctgatatcctattcaatctcctta
>L1_CP   Conilurus penicillatus (LxCPx2) LINE 1 repeat element, 3' UTR.
ggggatccatcccatatgctgacaccgagcccagtcactattgctgatgccaagaactgctcgctgacag
gagcctgataaagctgtctcctgagaggctctgccagagcctgacaaatacagatgcaaatgcatgccac
caaacgtcagactgagcacaggtccacattggaggagtttagggaaggactgaaggagctgaag
>ISAT_RN   Rat satellite I repetitive sequence.
tggtgatttcggttagttccaaataggccgcagtagtaataagtggactgtcgggatatagaaaaatttt
acgaatggaatcaaaatttctaggcgaattcagtgagttcccaatggacatgcttgtattagtgtgcttt
tagatatatagcaacattttaaggaacggaatctaagtatcatggtgaattcagtagtttcgcaatagga
ttagcatgtaataagcttgttattcaagataaagcaacgtttttacgaatgaaacaatgtatctttgtga
attcagttagttccaagtagcaggcccttttaatatgtgtacttttaaagatttatcaaaatatggtgag
ccgaatctgatgaacatggtgaattcggttagattccaataggcc
>LTRIS   Mouse LTR-IS sequence.
tgaaagatcctggcataatgtaaaaggacacagaagccctgaaattggcaagatagatgtcagtgttagc
agaactagcttcactgatttagaaaaatagaggtgcacaatgctctggccactccttgaacctgtgtgtc
tgccaatgttctgaccaggtgtgtgcccattgctgcaccttcattagactctttccttgtacccctccca
tacccatttcttgagaatagacattgtttagatctggaaatctcctactctcccccttctcctttccccc
ctgagggcctataaaaactgggaactctttcccctcgaggacgactcctctacccctgcgtgggatatga
gtcgtacccagagctctggctttccccgaataaagcctcatgtggtttgcaacaagctcggtctgtcatg
agttcttgggtgtccgctactgtcatgagttcttgggtgtccgctactgtcctgaggcctgagcgagggg
ctcctctcggagtctttca
>RLTR3IAP_MA   Syrian hamster intracisternal A particle (IAP) LTR.
tgtgaggagccgccctcgctatcgctattgccgttagaagatggcgctgacatccactgtcagttggagt
taactgtcgctgtcagttggagttaactgtcgctgtcagttggagttaactgtcgctgtcagttggagtt
aaccgtttaaactgtgcctctcccgtgacgtcatctggggtgatgtgcaaaccaccaatcccggctctac
acatctcactcggagctcctaggcttatataaggggctgggtttcttagcttggggtctccctctaagaa
gctgatcatctatgtctcaagatgcattaaagctttactgcagaaggatccgagtgttctgcgtcgttct
tgctggcgagacggtagcgcgggaca
>RLTRSRC_MA   Hamster proviral LTR encoding pp60v-src protein.
tgtagtcttatgcaatactcctgtagtcttgcaacatgcttatgtaacgatgagttagcaatatgcctta
caaggaaagaaaaggcaccgtgcatgccgattggtggtagtaaggtggtacgatcgtgccttattaggaa
ggtatcagacgggtctaacatggattggacgaaccactgaattccgcatcgcagagatattgtatttaag
tgcctagctcgatacaataaacgccattttaccattcaccacattggtgtgcacctgggttgatggccgg
accgtcgattccctaacgattgcgaacacctgaatgaagcagaaggcttcatt
>MREP_MC   Murine middle repetitive DNA.
gaattccaaggtaaatgctgatacacaatgccatattgaggtaagtgttgttatctgacactggatagaa
aattgatgtctgagatcctacccaccacaggaagttctgttgatgtccctgatgcattcatgtagctcct
gttgtgaaacatgtatggtattttcattattatgattctacctgtaaaaaaaaaaagaaaactatgttga
tgccagtgatgtatgctgtgatcagcaattttgatggagtccaagtttgattttattcctattgctaatg
gaaacctagtggtggctatgatctgtgctactgcttgaaaatataatgaacctcaaggtccacaataatg
cccaagtttattttgagggaagtattcttatctggttctggagatcagattaaaatctggaaacctacct
gccacaggatcatcagttggtatttctcatgtatgtgtatagctcacaatatctaacatgtgataaatat
tgataattgtgatcctgctggaaacctgaagctattttgaagtcagtgatgcagctatgaccagcaatca
tggtggggtcttttatccctgttgctaattgagaccctggtgatggctatgatctgtgttgtttcttgag
aacctgatgaattc
>MIR   mammalian-wide interspersed repeat (MIR) - a consensus
acagyayagcatagtggttaagagcacggrctctggagccagactgcctgggttcgaatcccggctctgc
cacttactagctgtgtgaccttgggcaagttacttaacctctctgtgcctcagtttcctcatctgtaaaa
tggggataataatagtacctacctcatagggttgttgtgaggattaaatgagttaatayatgtaaagcgc
ttagaacagtgcctggcacatagtaagcgctcaataaatgttrgytattatt
>C573   Mus musculus (clone C573) chromosome Y DNA repeat region.
gaattctgtggttaaattgttttgaaatgtcagtcatgggtcttagatgaaggctttggtccacagtaca
atgttcataggtagtacaatatgcactctgaaaagtgattggaacctgagggctttaatcaatgagttaa
tcaaccaatggatatacaaggaatgggtaagaaacttgtaaatgaacgcggtcatttggacatgtcttca
aagctgtttattgtctttggtcccttcttgtgttaatgctgactagctgccaataatttgaacaattgtg
ctgcttcatgcccctttcatattcatgtgatcatggatccttctttcatttgtgatagtaacatgtcagg
ttcagaggaaacattgcttaattctttaatttttttttctagaaacggcatgctaagtgtagaaccaatg
ttacctagttgttgtagttggaatattcagccatggtatctgttgtctttgagactcaagaactttgctg
ctacccacaccactggtctttcttctgaattc
>RLTR1_MM   Mouse long terminal repeat.
tgagagaaagatgaaattttaggacctacaattcatgtaaaatataccagaaagttgtttgtgagcctaa
gaggctgcctgagactgagaacaaagaggaacaggcccaggcatgtcctagcaggccggtcgttaaggta
ttcctaagaacagctaaagatcataagataaaagatcctaagatcataaagataaaaaaagagtgcaagg
acagaacaaggctatctcagcttagtcaataccatctggcccagcacctccctctgcccactgaccttct
gactcagttcagagtcatatattaaccagatgttccaagcacccagccctcagacttcctgataccccga
tctatacgtacacttttactagtgtataactattctgttgaagtttaaattgtccaattgtgtgaaacca
caccaattccttccccagccccagacccttttctataaaaacccctagctttcaagcctcgaggccgact
accgctgtcccctatgggagatatgtataggcccggagctccgtcattaaactacctcacgtgtttgcat
caagacggtctctcgtgattctttgggtgcacgccgaatcgggaatgggggtttccccactaggctcttt
ca
>RLTRETN_MM   Mouse LTR (E.Tn sequence).
tgtagtctcccctcccctagcctgaaacctgcttgctcaggggtggagcttcctgctcattcgttctgcc
acgcccactgctggaacctgcggagccacacacgtgcacctttctactggaccagagattattcggcggg
aatcgggtcccctcccccttccttcataactagtgtcgcaacaataaaatttgagccttgatcagagtaa
ctgtcttggctacattcttttctctcgccacctagcccctcttctcttccaggtttccaaaatcgctttc
caggctagaacccaggttgtggtctgctggccagacacaaca
>GSAT_MM   Mouse gamma-satellite repetitive sequence.
gacctgtaatatggcgagaaaacagaaaatcacggaaaatgagaaatacacactttaggacgtgaaatat
ggcgaggaaaactgaaaaaggtggaaaatttagaaatgtccactgtaggacgtggaatatggcaagaaaa
ctgaaaatcatggaaaatgataaacatccacttgacgacttgaaaaatgacgaaatcactaaaagacgtc
aaaaatgagaaatgcacactgaaagacctggaatatggcgagaaaacttaaaatcacggaacatgagaaa
tacacactttaggacgtgaaatatggcaaggaaaactgaaaaaggtggaaaatttagaaatgtccactgt
aggacgtggaatatggcaagaaaactgaaaatcatggaaaatgagaaaaatccacttgacgacttgaaaa
atgacgaaatcactaaaagacgtgaaaaatgtgaaatgcacactgaaggac
>RLTR1IAP_MM   Mouse intracisternal IAP 3' LTR.
tgttgggagccgcgcccacattcgccgttacaagatggcgctgacatcctgtgttctaagtggtaaacaa
ataatctgcgcatgtgccaagggtatcttatgactacttgtgctctgccttccccgtgacgtcaactcgg
ccgatgggctgcagccaatcaaggagtgacacgtccgaggcgaaggagaatgctccttaagagggacggg
gttttcgtttttctctctctcttgcttctctctcttgcttcttgctctcttttcctgaagatgtaagaat
aaagctttgccgcagaagattctggtctgtggtgttcttcctggccggtcgtgagaacgcgtcgaataac
a
>IAPA_MM   Repeat associated with intracisternal A particle.
attggtgccgaattccgggacgagaaaatccgggacgagaaaaaactccggactggcgcaggagggatac
ctcattccagaaccagaactgcgaatcaaggttataaggttcccgtaacacagactgttgagaaggattc
aactgccgaattcagaactcatcagctggggaacgacggtgataaaggttcccgtaaagcagactgttaa
gaaggattcaactgtatgaattcagaacttttcagctggggaacgaggtaagtctgatcttgaactttct
aaggaaattcaagacagtctatcagaagtaaagtggaaaatggctttacaagtt
>RLTR2IAP_MM   Mouse intracisternal A particle (IAP) long LTR.
tgttgggagccgcccccacattcgccgtcacaagatggcgctgacatcctgtgttctaagtggtaaacaa
ataatctgcgcatgtgccaagggtatttctctaccccatgtactctgccttccccgtggcaacaactcgg
tcatggctgcagncaatcagggagtgatgcgtcctaggcgaaggatgattctccttaaaaggggacgggg
tttccgccattctctctcttgcctgcgctcttgcgcttttgctctctggctctggctcttgcttctggct
cctaaagatgtaaacaatagagctcgtgctctgcgctctggcgcctggcggcctggcgcctggctcctaa
agatgtaagcggggggggctttcgtttttggggcttggggcttgcgctcctggcccctgaagatgtaagc
aataaagttttgccgcagaagattctggtttgttgtgttcttcctggccggtcgtgagaacgcggagtaa
ga
>L1_MM   Mouse L1 repetitive sequence.
[encoded data, 6461 characters]
tggaaaaaaaaaaaaaacctacctctag
>RLTR2_MM   Mouse endogenous retroviral DNA, 3' LTR of lambda-13.
ctgcagcaatcaggagtgaacgtccgggcgaagagatgctcctaagagggacgggcgtctctctctgctt
ctccctctctgcttcttgctctctgcttcttgctctctgcttcttacacgctgctcctaagatcgtcaag
acacactaaagctt
>PER_MM   Mouse period repetitive DNA (lambda Sp28).
caggggtgtcaggcacagggttgtcaggcataggggtgtcaggcacaggggtgtcagcagggtctctggg
gc
>SQR1_MM   Mouse simple repetitive DNA (sqr family).
tatatatatatatattattctaacattatatattaacatcactaatatacccttcagcttttgttttgag
ccatccagtacacatgactctataaaaaatagcctctcagaaatccacttcaaatatacccctggcactc
tgagttagatcttgcattaccccagcaccgtgtaagcttctgaaatccagcggggtctctcaccctctcc
tcttgggaaatgttcgattagttgagctcactgtttccttcctcagtttttttctctgaatctttgctgt
gcctctggctttcttgtgcttctggaggggcactggtctacttacaagaggccattgtagctagagtaaa
agataaaagagatctgagccggcttctgtagagctgaaccacagacagacagacagacagacagaccatc
cctcacaaacaccaaagcctaagtttcaaatcagctcagttcttcacaaggtatgagccatgttacttca
cctgcctgccaggagcataatcatttcttggggaaaaaaaatctacagattctcaaaacacctgcacatc
caatgcccagcattgattaagatgtccaggcatgacagcaggtatgccaggatgcattccttcaacttga
tggttcattagttcagggattaaggcttggctcaggcttgtggtcagtcccaacata
>SQR2_MM   Mouse simple repetitive DNA (sqr family).
tctaaacatggaaggactgctgttttcatcttcacccttactcagatgtggggctagtgacatggcgcaa
tggttaaagcatataccactaggccctgacaacctaagtttgacccttgggactcatgtgatggaaaaag
agaataaaatcctacaagttttcctctgacctcctcatgcatagctgtgtgtgcacgcatgagagagaga
gaaagaagagagggacacagacagacagataaacacagagagggagagaaagagaaagacagacaggcag
agacacagagacagagaaacagacacagagaaagagagacaggcaggcagacagacacagataaactgtg
acagacagacagacagacagacagagacaaagaaagggaataatctttaaaaatgaaaacaatttgcctt
tgatgaagcaagcgcatttcgtgctgggtttctggcttaagcatcgctttagttcatgtctggaataagt
ctgctggctcttcatttctacatttgtgaggaggtaatcaaatgtgcttcctttgaatcaaacactcaag
aactattcaagtcacattgattaatacaatgaagtgtaagtacaaggctagctggcttcgagaatcctat
cg
>SQR4_MM   Mouse simple repetitive DNA (sqr family).
ttttttgctacattcatatatagaagtgtactgaaattgaagtaagtttttctacaccattaaactacaa
tttgccccgttctttcagcatcttgaatcctgggtcttgaagacacagttctgaataggccatcaaaagt
tgataccatgctcataattgttttattgataacaactgttttgcctaggctagcagtcaatccggatcat
acttatctgtttcatacttaacagtggaatagccagtgttttctgcttcaggaacagcaagctctaaggg
cttatactggtaaaataaataaatagatagatagatagatagatagatagatagatagatagatagatag
atagatagataaagtcttgactgttacatgatgatatcttgggaggcctggtagcatatatccataatcc
cagcactca
>CYRA11_MM   Mus musculus (clone A11) chromosome Y DNA sequence, repeat region.
gaattctgaacatgttctcacatagggcatttgaatatactttttaggttaaccccatatgatcacaaga
aacaaaatgtagcaagaagatcagagtcagaagtatatctcagactcatgtcaaagacagtctgggaggc
acaccatgcttcggttttcaaagttccagagagtggttctccacctttttaatgctgcagttccttcata
tatatacttccttatgctgtgtggtgcaccaactgtaaaaatattttttgctgcttcataactgaaatgt
cctactgatatgaattgtaacatacatttctgacatacagatagtcttagacaactcctgtgaaatttgt
cacaaggactagcaacctacaggttgccaaccacagtgccagcaactgggaaaactagccagccccttga
tttttacaatgttgacttccgtaactatagtagaatagatgtgctctattttagtggtctaagcatgtga
ggatctgtaacactacctggaaacacacataccaaattggatgagggagtctattttttctgtcctggac
cttgcaggtttgagtcagctctaatcaaatagaagagaaaggatactagatgaattc
>ZP3AR_MM   Repetitive segment of ZP3 gene.
agagcacctgcctagagtacccctgtaaagcgcttgggggcatggctcagtggtagagtccctgcctaga
atcccccagggaggggttggggggctggctcaggggtagagcccctgcctagaatcctccagtgaggggc
tgggggcgtggctcaggggtagagcccctgcctagaatcctccagtgaggggctggggcatggctcaggg
gtagagccccctgcctagaatcccccattgaggggctggaggcgtggctcagtagcagagcccctgccta
aaatgccccagggagggggtgggtgcctcactagagcact
>RLTRMRS_PS   Dwarf hamster retrovirus MRS-Ps LTR.
tgcacactagcccatgtggagacagtgtagaactgctgagagaatctcaatggctatctgtcagaggttc
gacacatgtggttacgctctgggaaaatggttcaggtccctgcagctgcttgcatggctggctgtttgga
atgggtgctagatgtgttttgtgctatgataacaatattgccttttattcaaggatattttattcaagga
tattttagcctgtaagctcactagtaattcagagatgcctagagagcacttagatatagtttcaggaact
gaaagagatacagatcagcagtcaataggtgggtattgccctctgtgccttcagacacagatcctaaggt
gccagttgtgacttcagatgtcagccagggcctgataaatcaattagggctaaggctataggaagcagcc
cacaatgagaccctgcctgtaattaacccgcccacaacaaacatgctgtgggattcacaacaatactcta
atttgggatcttagggcccctaaatcaacactataaaagtttactatctagagacaagattagcctctaa
actcaataaatcaaatctctgatatgctgaccacaagcaggccaaaataaacagaggttcctaatatgca
cttgctgagaaacttcaaagggaattgttaacatctgtagaatcctgtttatctttaaactgtgaccaaa
gatctgttctttgagctttctgtataaaaacccagtactttgaagtaaactttgcagcagttcgcaaacc
tcctcaggtgtgtttgtgtctgtctgtcaagccgaagccattcctgacctggtcatctgagtcttggtct
ccacacagacctgcaacccactgagcagtctgtggcagctggtgcccaaaacagggac
>MTA   Rodent MTa MaLR-LTR - a consensus.
tgtactggctagttttgtgtcaacttgacacaagctggagttatcacagagaaaggagcttcagttgagg
aaatgcctccatgagatccaactgtaaggcattttctcaattagtgatcaagggggaaaggccccttgtg
ggtggtaccatctctgggctggtagtcttgggttctataagaaagcaggctgagcaagccaggggaggca
agccagtaaagaacatccctccatggcctctgcatcagctcctgcttcctgacctgcttgagttccagtc
ctgacttcctttggtgatgaacagcagtatggaagtgtaagccgaataaaccctttcctccccaacttgc
ttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagaca
>MTB   Rodent MTb MaLR-LTR - a consensus.
tgtactggctagttttgtgtgtcaacttgacacaagctggagttatcacagagaaaggagcctcccttga
ggaaatgcctccatgagatccagctgtaaggcattttctcaattagtgatcaagggggragggcccagcc
cattgtgggtggtgccatccctgggctggtagtcttgggttctataagaaagcaggctgagcaagccaag
ggaagcaagccagtaaryarcayccctccatggcctctgcatcagctcctgcctccaagttcctgncctr
cttgagttccagtcctgacttcctttggtgatgaacagcaatgtggaagtgtaagctgaataaacccttt
cctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagaca
>MTC   Rodent MTc MaLR-LTR - a consensus.
tgtgctggctagttttatgtcaacttgacacaagctagagtcatytgagargagrgaacctcaattgaga
aaatgcctccataagattggcctgtaggcaagcctrtaggrcattttcttaattagtgattgatggggga
gggcccagcccattgtgggtggtgccayccctgggctggtggtcctgggttctataagaaagcaggctga
gcaagccatgaggagcaagccagtaagcagcactcctccatggcctctgcatcagttcctgcctccaggt
tcctgccctgcttgagttcctgtcctgacttccttcgatgatgaactgtgatgtggaagtgtaagccaaa
taaaccctttcctccccaagttgctttggtcatggtgtttcatcacagcaaatgtaaccctracyaagac
a
>MTD   Rodent MTd MaLR-LTR - a consensus.
tgtgctggctagttttatgtcaacttgacacaagctagagtyatctgggaagagggaacctcaattgaga
aaatgcctccatcagattrgcctgtgggcaagtctanaggacattttcttrattgatgattgatrtggaa
gggcccagcccactgtgggtggtgccayycctgggcaggtgrtcctggrtggtataagaaagcaggctga
gcaagccatgaggagcaagccagtaagcagcgttcctccatggtctctgcttcagttcctgccttaggtt
cctgcctcgagttcctgccctgacttccttcartgatggactgtaacgtggaactgtaagccgaaataaa
ccctttcctccccaagttgcttttggtcatggtgtttcatcacagcaacagaaaccctaactaagaca
>RLTR3_MM   Mouse mammary tumor virus LTR.
aatccaataggtagattattaattactatgttaagaaatgaatcattatcttttagtactatttttactc
aaattcagaagttagaaatgggaatagaaaatagaaagagacgctcagcctcagttgaagaacaggtgca
agagctaacggccgcaggcctagaagtaaaaaagggaaagaagagtgtgcttgtcaaaataggagacagg
tggtggcaaccagggacttataggggaccttacatctacagacggttagcttggcttcccagggttcaaa
ctgttcttaaaacaaggatgtgagacaagtgcgcaacggttagcttggcttcccagggttcaaactgttc
ttaaaacaaggatgtgagacaagtggtttcctgagttggtttggtatcaaatgttctaatctgagctctt
agtgttctattttcctatgttcttttggaatctatccaagtcttatgtaaatgcttatgtaaaccatgat
ataaaagagtgctgatttttttgagtaaacttgcaac
>RLTR4_MM   Murine leukemia virus (MuLV) LTR.
tgaaagaccccaccataaggcttagcaagctagctgcagtaacgccattttgcaaggcatgaaaaagtac
cagagctgagttctcaaaagttacaaggaagttcagttatagattaacagttaaagatcaaggctgaata
gcactgggacaggggccgagcaggatatcggtggtcaagcacctgggccccggctcagggccaaagaaca
gatggttctcagataaagcggaaccagcaacagacacagaagccccgatagacgtcagtgttagcagaac
tagcttcactgattttaaaaaatagaggtgcacagtgctctggtcactccttaaacctgtgtgtctgcca
atgttctgaccagatatgtgcccattgctgaaccttcattagactctttcctcgtacccctcccctaccc
atttcttgaaaatagacattgtttagatctaaaaagtcccacctcagtttccccaaatgaccgggaaata
ccccaaaccttattcaaactaaccaaccagctcgcttctcgcttctgtaaccgcgctttttgctccccag
ccctagccctataaaaagggtaaaaaccccacactcggcgcgccagtcctccgatagactgagtcgcccg
ggtacccgtattcccaataaagcctcttgctgtttacatccgaatcgtggactcgctgatccttgggagg
gtctcctcagattgattgactgcccacctggggggtctttca
>RLTR5_MM   Mouse endogenous retrovirus (MuRVY) LTR.
tgaacagcaaaaacttataattttgggtcttatagcattgtggtatgtaagttcaagaaattcagggctg
aagaatagacccaggcgggtccaggcacagccatactcaccctgtagctaagaatgtccggccataaaag
attaaaaagagaatgcaggaactagccactgctaacagggcggaccaaatggccatctggcaggatggca
cctccctatagaccccataaatcatacattgaccaggtgtcctgctgacctcgagaagtcccaagccctt
gtgtctttctccattttagcaggtacatattaccctgctaatttgtaatcatcctgccgccatttaaata
agccaattatgtgtaatggcgcaaattcttttggctcccctgtttttggtttgtggtttttgcctttata
agcctgtaaaaagtttgggctggggttgaactcccctgccccctgcgcggtgcatgagtttcggtcctca
gcattctggcttgagcgaacctttgttgtttgtgtgtttgtacgccattaaagccttgtataattacagt
gagttctggtctcagtgtcctactgggtgcgcgcttgcccgaaaagggactccccacggggtctttca
>ORR1A   Rodent ORR1a MaLR-LTR - a consensus.
tgtgrtggtttgwatatgcttggcccagggagtggcactattaggaggtgtggccttgttggaggargtg
tgtcactgtgggtgtgggctttgagaccctcctcctagctgcctggaagycagtcttctnctagctgcct
tcggatgaagatgtagaactctcagctcctcctgcaccatgtctgcctggatactgccatgctcccgcct
tgatgataatggactgaacctctgaacctgtaagccagccccaattaaatgttgtcctttataagagttg
ccttggtcatggtgtctgttcacagcagtaaaaccctaactaagaca
>ORR1B   Rodent ORR1b MaLR-LTR - a consensus.
tgtggtggtttgaatraaaatggcccccataggctyatagggagtggcactattaggaggtgtggccttg
ttggaggaagtgtgtcactggggtgggctttgaggtytcakatgctcaagccaggcccagtgtgttcact
ctcttcctgctgcctgcagatcaagatgtagaactctcagctacttctccagcaccatgtctgcctgcat
gctgccatgcttcccgccatgatgataatggactaaacctctgaaactgtaagccagccccaattaaatg
ttttcctttataagagttgccttggtcatggtgtctcttcacagcaatagaaaccctaactaagaca
>ORR1C   Rodent ORR1c MaLR-LTR - a consensus.
tgtggtggtttgaataagaatggcccccataggctcatatatttgaatgcttggtcaccagggagtggca
ctgtttramaggattagaaggattaggaggtgtgrccttgttggaggaagcgtgtcactggggtgggctt
tgaggtttcaaaagcccaygccaggcccagtgtntctctctcttyctgntgcctctggatcagtatgcag
ctctcagctatttctccagcactanrtccactgncatgccgccatgctcyccatcatgatgytaatggac
taacctctgaaactgtaagcaagcccccaattaaatgttttcttttataagaattgccttggtcatggtg
tctcttcacagcaatagaacagtgactaagaca
>ORR1D   Rodent ORR1d MaLR-LTR - a consensus.
tgtggtggtttgaatragaatggcccccataggctcayatatttgaacgcttggtccccagttggtggaa
ctgtttgggaaggattaggaggtgtggccttgttggaggaagtgtgtcactgggggtgggctttgaggtt
tcaaaagcccaygccatgcccagtgtngctctctctgyytctgcttgakgrtcaagatgwnagctytcag
ctnctgctccagcaccatgcctrcctgcctgccgytccctnaccmcgacgatcacggactctraccctct
ggaactrtaagccaaattaaatgctttcttttataagttgccttggtcatggtgttttttcacagcaata
gaaaagaaactaagaca
>MYS1_PL   Mouse mys-1 transposon internal sequence.
aaatggcgcccaacggctcgagtttccaccttaaacctgagaatatttaataaccaattctaaacagagc
caaaaccaggttcctgcttcttgtcttatacggcagctagatgcggcaaaacgcaagtttggacactggc
gggttcctggcgggtgcgtctgaccggcagtatggcggaaatgaggcatctgccagcggcaaattaagct
gtgtggtagatttagtctttactattattttttttttaaaaaaaaaaaaaagaggtttctgggctacacg
ctgctttgataaaagcttagacccactatttctgagacttgatgactcccagagctggcggaaaatgtac
cactgccatgttgggaagctgaagtgggcggagccagcagccacagcgccgtttcacgcttacaatggta
cagtttaaagcaataggctcaaggctcaaggtaatataaaacataagccacataaagatggctaccacac
agagaatctggattatgttctctttgatattcataactaaagaaaaacatttgattacaaaagctgttga
gttatgccaaaatgtatattttaaaggtaccttgacttcaaaatttggatataaggatatgttactttgg
aaaagaggttctgcttttgtttccacagaaagccagaggctgtggacttgttccagattaagatacatca
ggtttcaccagccaagaccccctgaaaggactccgatgacaccatggcccagatgatccaacatccagat
cggtttcaaggcaactggttcacacaatacagcctcacggctaccccataggtctaaaattttctttgcg
tccccataagatacagcgcccccctccagcaggaagcagtaagagatgctacgcccaaattcccaaatat
accaagctggctttagaggtggaattggctcactccccctctaaacccagacatattgctttaaaaaaaa
aaaaaatggttaagagattcttgtgtcccaaatcagaagagccctctggtgtgggacagagaaaaaccaa
tatttttatttaaaacaggttgattataaatgtgatctctttctaaaaaagaaaaggggatatgatatat
aggaggatatggagatgataagataaaagggtagattaatgaacctacttttaaagaacaacttgtttaa
aatgttttacattggtatagattttagtttatgtttaaaatgttttacattggtataaattttagttcat
tgatacaaacttgaagttaattttgttatactgtatatatatatttctattcttgtttgaggtattatgt
ttatataactcatttaaaattgtaatggataattaaaaaataggttaataattagtcatctatgataatc
atatctgtagccatgttagttaagtcttctaggtatacatagatatatttcagatagataggtaatcttc
aaacacttcatagacctagaaaatatggcatttaaataacttagaattctgttgatgtgagacacaattg
ctcctggctgcaccaattgatcccgagagaatgttgggcttctaagacatttccatttggaagtttgtct
ttttggcacaaaatggcctactgggcaaagaactgcccttgccttgacggctgacagtacaaatgcaatg
ctgtcctttctggacaagcgggacacaaggaaagcgaccactgtactctgccaagacagggtaagatggt
ctctcagaattcctgcttctgaaaatggtctgtcagatactctaggcctgtagccaatttgaatgcacca
acaatgctgagaaacatcaggtgactgtccaggctgccagctgtcttggtctactcttgcaagattcccg
aagttgcttgcatccgtctaccatttctcaggtaccattatgttccttctcaggtctttgatgtggttga
aggctagatagtcgtaatttcctcagttatgataaaagataagttagctataaaaccttaaactcacaaa
tataagatagataggacatcttctttaatattgtaactataattcttgctcggtaattgttttgttatat
gtaattttaccatgttaaagttaaaaccttcctttttaaaaaaagaagaaaggggaag
>PMR6   Mouse PMR6 middle repetitive sequence.
gcaggctagtcttttgcactgtttgcatagttctggggatcaatacctagggccttgtac
>PMR66   Mouse PMR66 middle repetitive sequence.
gcaggagttgtggtgacatcagaagttgtcatcacttctccagtggttgttacttcagcagtggtggtga
tgaacaggagtggtggtaacatcaggtcttgtaacttgtccagtggttgtgacttcagaagtggtggtga
tgtcaggagtggtggtgacatcagaagttgtcataacttctccagtggttgttacttcagcagtggtgct
gatgacgggc
>PMR89   Mouse PMR89 middle repetitive sequence.
gcacctggcccctcctacaaccaagaaagaagcacaacgtttagtgggtctatttggattctggagacaa
cacatccctcacttgggtgtgttacttaggcctatttaccaagtgactcggaaagctgctagctttgtgt
ggggcctggaacaggagaaggcccttcaacaggtccaggctgctgtgcaggctgctctaccacttggacc
atatgacccagcagatccgatggtc
>RAL   Rat RAL repetitive element.
tgaaaggaaaattatacgaatttaagtttaaaaatataaaattaaaagagtaagccccaaaagccacaaa
ctgagggctaagctgccgccaggaatagcaggccataaagataaagaaaaggaatacaaaaaccacctca
ggctatcaaggactgacccataaaccatccaaagacattcccccagcttactcagagtcatattttaacc
agatgtcctccagaccctgataagcccctacttgtgctttccagccattgtgtcctgcagagagcattcc
aggaaaccgggtagcccaagcctaaccagagtgtttcaaatacagatcttcatcaattctgacaaacctt
taaaaataatgaagacctgaagaccctacccttctcctgatttagtagctttgttccaggcaatcagggg
tccataataccttctgtcatccccttatctcctggagccataaaacaatccttgtaacttgtggtgcctt
cccctttgacatcccccatcccctggctacacagcctctgcctttaaatactctttctcccagcctctct
gggtcagaagagcctctgtctcctgcttgagaaacgtgtcagcgcgcagatctctgtaataggtctccgt
aataaacctcgcctttgcttattacatccaaaatggtctctctgtgtctggggtctgcgatttcccaaga
cttgagtaagggtctctctctggggtctttca
>RDRE1_RN   Rat R.dre.1 repetitive sequence.
ggctggggatttagctcagtggtagagcgcttacctaggaagcgcaaggccctgggttaggtccccagct
ccgaaaaaaagaaccaaaaaaata
>ALSAT_RN   Rat alpha-type repetitive DNA sequence (reiterated component).
agctttgcagttttatgagatcccatttgtcgattcttgatcttagagcataagccattggtgttttgtt
caggaaattttttccagtgcccatgtgttccagatgcttccctagtttttcttctattagtttgagtgtg
tctggtttgatgtggaggtccttgatccacttggacttaagct
>RNALUIII   Rat Alu type III-like repeat.
gggctgagaatgtagctcagttggtagaatgtttgcctagcatgcatgaagccctgggttcaatcccttg
caccatataaa
>DRB_RN   Rat repetitive region D of non-transcribed ribosomal DNA. 
attcattcattcattcattcggtcggacggacggacggacggcaggcaaccaaggtctggcctttaacaa
ggcaggaaggcataccctgcgggacgcacagagaattc
>L1NH_RN   Rat DNA with long interspersed repeated sequence (L1NH).
ggatccggcccgcagcagctcctccgctcctagacccggtgagagagagacccaaccgctttgttcaggt
gggcactcctgaggctgcagagcggaagagacctacctatactacttgctccaccccttgccttacatcc
cttggccctaagaggaaactgtataagcctccgggctccctttgggggaggtcctagg
>L1R2_RN   Rat L1R2 sequence DNA.
aaatgttcaacattcttagtcatcagggaaatgcaaatcaaaaggacctgagattccacctcacaccaga
cagaatggctaaaatcaaaaactcaggtgacaacaattgctggagaggatatggagaaagaggaacactc
ctccattgttggtggaattgcaacctggtacaactattctggaatcagtctggaatttcctcagaaaact
ggacatagtactacctgaggactcctctgggcaaatacccaaaaaatgctccaacatatgacaaggacac
atgctccactatgttcatagcagtcttatttgcaatagccagaagctggaaagaacccagatacccttca
acagaggaatggatacagaaaatgtggtacatttatacaatggagtactactcagctattaaaaacaatg
aattcatgaaattcataggcaagtggatgaaagtagaaaatatcatcctgagcaaggtaacccaatcaca
aaaaagcacacatggtatgaactcactgataagtggaaaatagcccaaaagctcagattacccaagatac
aatccacagaccacatgaagttcaagaagaaggatgactaaagtgtggatgcttcagtcctcttagatgg
gggaacaaaaatattcataggagtatatatggagacaaagtttggagcagaggctgaaggaatggccatt
cacagcctgctccacctggggatcc
>LINE3_RN   element.
gggaatagagaggcaaagattaaaacagacacagaaggaacacccattcagagcctgccccacatgtggc
ccatacacatacagtcatccaattagacgagatggatgaagcaaagaagggcaggccgacaggagccgga
tatagatcgctcctgagagacacagccagaatacagcaaatacagaggcgaatgccagcagcaaaccact
gaactgagaataggatccccgttgaaggaatcagagaaagaactggaagagcttgaaggggctcgagacc
ccatatgtacaacaatgccaagcaaccagagcttccagggactaagcaactacctaaagactatacatgg
actgaccattgactctgaccccataggtagcaatgaatatcctaataagatcaccagtagaaggggaagc
cctgggtcctgctaagactgaacccccagtgaacaagattgttggggggagagcggcaatggggggagga
tggggaggggaggggaagggggagggattagggggatgtttgcccggaaaccgggaaagggaataacact
cgaaatgtatataagaaatactcaagttaattaaaaataa
>LPKR_RN   Repetitive segment of L-type pyruvate kinase. 
gggggtgggtttgtttttgtttttgtttttgtttttttgagatcgggtctttttatgttgtagctctgac
tgatggataggcaggtctcaaatttagaaatctccctacctttgcctcctgagagttggactgggaccac
cttgctccacatgaggctgggtttttgagacagggtctcaggtagccttggatatttctagcttatttca
tagaccctattatatcgtcttagcctggtgaaagcataggtatgtgataccacacccaacttaacaaatg
cttgttgagtacctggaaaacaaggtttggaattgg
>RLTR7_RN   Rat oncomodulin LTR-like sequence.
tgttggcagccgctattgctgcagagccgcgccttaaagatggcgctgcctgtgtgagtcagcaaaacct
gaagagcagcaacacgcatgtgcctacttgtcatggcctacgcccgaggcatgtgcaccaatcaggtgga
gacacgagtcttccaagcgtacataagccacactcttttctcagtcggggttccccttctcacaagagct
gaacaataaaggcgtgactgcagaagaatcctggtgttccaagtcgttcttgccggcgagaccaccgtgc
gggaca
>SATI_RN   Rat satellite I DNA (isolated by sau3ai digest).
gaattcacagagaaacagtgtttcagttcgttaaaacgttgctctatcttgaataacaagcttattacat
gcgaatcctattgggaacctactgaattcaccatgatacttagattccgttcctcaaaatgttgctccat
attgaaaagcaaactcatacaagcatgtcccattgggaactcactgaattcgcctagaaattttgattcc
attcgtgaaaatttttctatatcccgaacagtccacttattactactgcggcccactgggaactaaccga
attcaccatgttactcagattcggctcaccaaattttgataaatctttaaaagtacacatattacaagag
caggctactgggaactaact
>RLTR6_MM   Mouse virus-like 30S (VL30) LTR.
tgaagaatgaaaaattactggcctcttgtgagaacatgaactttcacctcggagcccaccccctcccatc
tagaaaacatttttgagataaaggcctcctggaacaacctcaaaatgacattgccaaatgataagacatg
actccttagttacgtaggttccttgatgggacatgactccttagttacgtaggttccttgataggacatg
actccttagttacgtagaatcctttggcagaaccccttgtcccttggcagaactccctagtgatgtaaac
ttgtactttccctgcccagttctcccccctttgagttttactatataagcctgtgaaaaattttggctgg
tcgtcgagactcctctaccctgtgcaaaggtgtatgagtttcgaccccagagctctgtgtgctttctgtt
gctgctttatttcgaccccagagctctggtctgtgtgctttcatgtcgctgctttattaaatcttacctt
ctacattttatgtatggtctcagtgtcttcttgggtacgcggctgtcccgggacttgagtgtctgagtga
gggtcttccctcgagggtctttcatttggtacatgggccgggaattcgagaatctttcatttggtgcatt
ggccgggaattcgaaaatctttcatt
>R91ES8_RN   R.norvegicus 91ES8 DNA sequence.
gaattctgtccgttccaggctggaaaggcttgtaggaagttgactttggagataaaaaaaaaagcccctt
ttttccttttacaaagtgaatcgttcttacttggtgattaagcttagttttaagtagttctatatggtaa
aaagcatacttttctatatagacgaaaaatccttttcccagtctcaatatctcattctttggc
>CENSAT   Centromeric satellite DNA; satellite DNA.
acatagtatatgagtgagttgcactgaaaaacttagaatataagaaacgcacagtgtagt
>RMER1   Medium reiteration frequency repeat - a consensus.
attgagcatcagagtgcaggagacgagcctcctcctggcactgggtagctagccggcatgctgagagctc
ctgtgtggttgggagagcgacaggtgaccaactcagctaccrcccaggcccagatccagggctttgagtt
ggcccaccccaacatctgcccatctgtgaatgctggagacatgaaggccagtcctgcgatccaaagctgc
aggatctccatgacacagggcaacaacaggatatccaagaggagtcctggtgaggatccagyattgatrg
tgcagaagccagaggccttgaaccagaccaatgactcattgcaatgaacatttgcaagcaaagaagtgtg
gacaaaagggtatactatktgacacactgcagctaccatgtgagttttgt
>RMER2   Putative LTR of an endogenous retrovirus (a consensus).
tgagaggccaaatcttttaaattcagactccattttagagaacctgacctaagtttgaactcaggtaaac
taacaggctggtacctagcattagtttccaagttacccccccacnaacaaaacctgagcctagctccagt
ctctaggctaacccccaacaagaccagcgtctccaggttacacccccaacaagaccagcgtctccaggtt
attcccccaacaaacctgcacccccaggttacaagcccaccccctgtctaatgaccaccaatgcagaggg
aagcagaaattaagtttatgatatgactcccagcaccagccaattatgttaaaggccacagtagctttcc
aattagatgcttgcacactcaccccctgcttgctgcttactataaagccttgccctgatagatattcggg
gcwcccccccatcaccaaaaccatcctgcgtgacagtggtgygntgggggngccngagctagctcgaata
aagaccctgctgtgagttgcatcagattggctcctgtctgttttttggggratcactaacayttccctgg
cactaca
>RMER3   Medium reiteration frequency repeat - a consensus.
tgttgttgtaaaaatataaaaataaagagtacagttgtcttttaccccgctaggtccgcaccacggtgcc
caagatatctgctagatatcttggcggaaacacatcccagccgcacacttttttacactcaaaccctcac
ataaaagaacacacaacacaataatcttagacccaattggtaagatataattgcccacctaaacatacaa
agcccggtaccatccatcccttaagaacattaataacaacctgtaaatacacagagcggaatcttaacgt
cacctgccatattgtcctgccatggcttctccgcctctctctccctcctgtctcttcctctctcccttcc
agtctcctcctcttccttcaaacttctctcccgcccatccttccttctcctccaatgacaggcctccttc
tatcctgtacctgcccctcacctgtattttacaaattcaatggggagaaggttctggtgaagtcacctga
gtcctgagtacgtgactaggcagctgtccttggggcagtggaattagcatcaaaatacagataacttcag
ggcaaaccacaaca
>MSTC   (MSTc subfamily) - a consensus.
tgctacggtttgaatgtttgtcccctccaaaactcatgttgaaacttaatccccaatgtggcagtattga
gagrtggggcctttragaggtgattgggtcatgagggctctgccctcatgaatggattaatggattaacg
tattaatggattaattggttatcacgggagtgggatcggtggctctatcataaaarycattttgnctctc
gnrtgngccccttcttgccctttcacgccttccgccatgttatgacagagcacaaggccctcaccagaaa
ccagatgcagccgccatgatcttggacttcccagcctscagaaccgtgagcaaaataaacctcttttctt
tataaattacccagtctatggtattccgttaaagcagcacgaacggactaagaca
>MLT1A   (MLT1a subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>MLT1B   (MLT1b subfamily) - a consensus.
tgttatgggctgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gactgtatttggagatagggtctttaaagaggtaattaagttaaaatgaggtcattagggtgggccctaa
tccaatatgactggtgtccttataagaagaggaaattwggacacagacacgcacagaggraagrccatgt
gargacacagggagaaggcggccatctrcaagccaaggagagaggcctcagaagaaaccaaccctgccgr
caccttgatctcggacttcyagcctccagaactgtgagaaaataaatttctgttgtttaagccacccagt
ctgtggtactttgttacggcagccctagsaaactaataca
>MLT1C   (MLT1c subfamily) - a consensus.
tgttatgggttgaattgtgtccccccaaaattgatatgttgaagtcctaacccctagtacctcagaatgt
gaccttatttggaaatagggtcwttgcagatgtaattagttaagatgaggtcatactggagtagggtggg
ccctaaatccaatatgactggtgtccttataaraagaggaaatttggacacagacacgcacacggggaga
aggccatgtgaagacggaggcagagattggagtgatgcakctacaagccaaggaacgccaargrytgcca
gcaaaccaccagaagctaggaagaggcaaggaacagattctccctcacagccytcagaggarrccagccc
tgccgacaccttsatctcggacttctggcctccagaactgtgagagaatamatttctgttgtttaagcca
cscagtttgtggtactttgttacggcagcccyaggaaactaataca
>MLT1D   (MLT1d subfamily) - a consensus.
tgtggtaggcwgaataatggctccccaaagatgtccacgtcctaatccccagaacctgtgaatatgttac
cttacatggcaaaagggactttgcagatgtgattaagttaaggatcttgagatggggagattatcctgga
ttatccgggtgggcccaatgtaatcacaagggtccttawaagagggaggcagagggtcagagtcagaaga
aggagatgtgacgatggaagcagrragngaaaactcaacgttgctggctttgaagatggaggaaggggcc
atgagccaaggaatgcgggcagcctctagaagctggaaaaggcaaggaaacggattctcccctagagcct
ccagaargaacgcggccctgccgacaccttgattttagcccagtgagacycattttggacttctgacctc
cagaactgtaagataataaatttgtgttgttttaagccactaagtttgtggtaatttgttacagcagcma
yaggaaactaataca
>MLT1E   (MLT1e subfamily) - a consensus.
tgtggtaggcagaattctaaratgmtcccaatgatcctcgcctcctggcgtaatctccttgagtgtgagt
aggacctgtgacttgcttctagccaacggaatatggcaaaggtgatgaratrtcacgtgattacgcgtac
gtgattatgtaasattcagtctttgmcgtcattcttgccgagagactctcctsctggtyttgaagaagta
agctgccacgtcatgagnnnncnnannagarygccgcaaggcaagggnntctagagctgagagtcgccct
tactgatgggcagcaagaagcaagccacctcagtcctacagccgcaaagaactgaattctgccaacaacc
tagtgagcttggaagcagatcctgcccagtcgagcctccagatgagancgcagccctggctgacgccttg
actgcagccttgntagaccttgagcagaggacccagctaagccgtgcccagactcctgacccacagaaac
tgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgttacgcagcaatagaaaa
ctaacaca
>MLT1F   (MLT1f subfamily) - a consensus.
tgtggtagccagcctccaagatggcccccaatgatccctgctcctggtattcacayccttgtatggtcyc
ytcctacattgaryyagggctrgtctgtgtgaccaatagaatagggcagaagtgatggcgtgtsacttcc
aagaytargtcayaaawaacactgtggyttctgcyttgntctcttcgggctactcactctgggggaagcc
agctgccatgctatgaagacactcaagcagcctatggagaagtccacgtggsaaggaactgaggtctcct
gccaacagccagcttcgacytgccagccatgtgagtgagccatcttggaagcggatcctccagccccagt
yaagccttcagatgactgcagccccggctgacatcttgactgcaacctcatgagagaccctgagccagaa
ctacccagctaagctgctcctarattcctgacccacagaaactgtgagataataaatgtttrttgtttta
agccactaagttttggggtaatttgttacgcagcaatagataactaataca
>MLT2B2   Interspersed repeat MLT2B2 - a consensus.
tgtgatggttaattttatgtgtcaacttgactgggctaargggtgcccagatagctggttaaacattatt
tctgggtgtgtctgtgagggtgtttccagatgagattagcatttgaatcagcggactgagtaaagaagat
tgccctcaccaatgtgggcgggcatcatccaatccgttgagggcctgratagaacaaaaaggcagaggaa
gggtgaatttgctctctctccttgagctgggacatccatcttctcctgcccttggacattagaactccag
gttctcgggccttcggactycgggacttgcaccagcagccccccagattctcaggccttcggactcggac
tgaryyacgccaccggcttccctggttctccagcttgcagacggcatatcgtgggacttctcagcctcca
taatcacgtgagccaattcccctaataaatcycytctatccatcctattggttctgtctctctggagaac
cctgactaataca
>MLT2D   Interspersed repeat MLT2D - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacattagtct
gggtgtttctgtgaaggttattttttggatgagattaacatttaaatcggtagactgagtaaagcagatt
accctccctaatgtgggtggacctcatctaatcagttgaaggcctgaatggaaaaaaagggctgaccctc
ccccaagtaagaggaaattctgcctgcctgatngtcttcgaactggaatatcagctctgcggattttgga
cttgccagcctccataattgcatgagccaattccttataataaatctatctactctctctacacacaccc
tattggttctgtttctctggagaaccctgactaataca
>LTR10   Human DNA sequence 5'-flanking minisatellite PMS32.
tgttgtaaataaatttttggtgctgcaaaagaaataccactcaaacataagtttaattttctcagcaagg
caattttacttctctagaagggtgcgactcgcagatggagcaatggccagagcacacctgaacaagggag
gggaaggggttctgattcctgacacaggtagcccctactgatgcgtcgttcccgtatcggctagggttgg
actgcacagtctaagctaattccgattggctactttaaagagagcaggggtatgagccagagtggcgggg
tgagtagtttggtgggaagggtggtt
>MER2   Nonautonomous DNA transposon.
cagtcggccctccgtatccgtgggttccacatccgtggattcaaccaaccgcggatcgaaaatattcaga
aaaaaaattgnatggttgcgtctgtactgaacatgtacagacttttttccttgtcattattccctaaaca
atacagtataacaactatttacatagcatttacattgtattaggtattataagtaatctagagatgattt
aaagtatacgggaggatgtgcgtaggttatatgcaaatactacgccattttatatcagggacttgagcat
ccgcggattttggtatccgcggggggtcctggaaccaatcccccacggataccgagggacgactg
>MER20   Nonautonomous DNA transposon.
cagtggttctcaaccgggggtgattttgccccccaggggacatttggcaatgtctggagacatttttggt
tgtcacaactggggggggggratgctactggcatctagtgggtagaggccagggatgctgctaaacatcc
tacaatgcacaggacagcccccacaacaaagaattatccggcccaaaatgtcgatagtgccaaggttgag
aaaccctg
>MER30   Nonautonomous DNA transposon.
caggggtgtccaatcttttggcttccctgggccacactggaagaagaagaattgtcttgggccacacata
aaatacactaacactaacgatagctgatgagctwaaaaaaaaaaaamaatcccamaaaaatctcataatg
ttttaagaaagtttacgaatttgtgttgggccgcattcaaagccatcctgggccgcgtgcggcccgcggg
ccgcgggttggacaagcttg
>MER31   internal sequence belongs to the MER4I group.
tggtgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaagccc
cgaccttgggcyctgtccttggcctgcwnagtccagttttagcaagaatcctgctaagtcagtttagaga
gaatcccccaccctcgatatctgatcaggttcctcatcctccgccatcccccaggcgatgtctgatcacc
ctggcctgccttcagcaagaatcctgttaggtcagtttagcmagaatccccctacccctgatgtytcctc
ttagtaattttccatccactgacccccaccctgctccttggctataaatccccacttgtccttgctgtat
tcggagttgagcccaatctctctcccctactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtctgccttaccgtgctttaacaagtgtcgttgaataattttctctgaca
>MER33   Nonautonomous DNA transposon.
ctgcgctgtccaatacggtagccactagccacatgtggctattgagcacttgaaatgtggctagtccaaa
ttgagatrtgctgtaagtrtaaaatatacaccagatttcaaagacttagtacgaaaaaaagaatgtaaaa
tatctcattaataatttttatattgattacatgttraaatgataatattttggatatattrggttaaata
aaatatattattaaaattaatttcacctgtttctttttacttttattaatgtggctactagaaaatttaa
aattacatatgtggctcgcattrtatttctattggacaacgctg
>MER44A   Nonautonomous DNA transposon.
cagtagtccccccttatccgcgggggatacgttccaagacccccagtggatgcctgaaaccacagatagt
accgaaccctatatatactatgttttttcctatatatatatacctatgataaagtttaatttataaatta
ggcacagtaagagattaacaataactaataaaatagaacaattataacaatataccgtaataaaagttat
gtgaatgtggtctctttctctcaaaatatcttattgtactgtactcacctattttcggaccgcggttgac
catgggtaactgaaactrcggaaagtgaaaccgcggataaggrgggactactg
>MER53   a consensus.
gggttgccagatttagcaaataaaatacaggatgcccagttaaatttgaatttcagataaacaacaaata
attttttagtataagtatgtcccatgcaatatttgggacatacttataactaaaaaattattcattgttt
atctgaaattcaaatttaactgggcatcctgtattttatctggcaaccc
>MSR1   Human 37 BP minisatellite repeats, specific to chromosome 19.
agtcaagacccccagcccctcctccctcagacccaggagtcaagaacccccagcccctcctccctcagac
ccaggagtcaagaacccccagcccctcctccctcagacccaggagtcaagaccccccagcccctcctccc
tcagactcatgagtccagacccccagcccctcctccctcagacccaggagtccagacccccagcccctcc
tccctcagacccaggagtccagacccccagcccctcctccctcagacccaggagtccaggccccacccct
c
>TIGGER1   Autonomous DNA transposon.
caggcatacctcgttttattgcgcttcgctttattgcgcttcgcagatactgcgttttttacaaattgaa
ggtttgtggcaaccctgcgttgagcaagtctgtcggcgccatttttccaacagcatgtgctcacttcgtg
tctctgtgtcacattttggtaattctcgcaatatttcaaactttttcattattattatatctgttatggt
gatctgtgatcagtgatctttgatgttactattgtaattgttttggggtgccacgaaccgcacccatata
agacggcgaacttaatcgataaatgttgtgtgtgttctgactgctccaccgaccggccgttcccccgtct
ctctccctctcytcgggcctccctattccctgagacacaacaatattgaaattaggccaattaataaccc
tacaatggcctctaagtgttcaagtgaaaggaagagtmrcacatctctcactttaaatcaaaagctagaa
atgattaagcttagtgaggaaggcatgtcaaaagccgagataggccaaaagctaggcctcttgcgccaaa
cagttagccaagttgtgaatgcaaaggaaaagttcttgaaggaaattaaaagtgctactccagtgaacac
acgaatgataagaaagyaaaacagccttattgctgatatggagaaagttttagtggtctggatagaagat
caaaccagccacaayattcccttaagccaaagcctaatccagagcaaggccctaactctcttcaattcta
tgaaggctgagagaggtgaggaagctgcagaagaaaagtttgaagctagcagaggttggttcatgaggtt
taaggaaagaagccatctccataacataaaagtgcaaggtgaagcagcaagtgctgatgtagaagctgca
gcaagttatccagaagatctagctaagatcaytgatgaaggtggctacactaaacaacagattttcartg
tagatgaaacagccttctattggaagaagatgccatctaggactttcatagctagagaggagaagtcaat
gcctggcttcaaagcttcaaaggacaggctgactctcttgttaggggctaatgcagctggtgactttaag
ttgaagccaatgctcatttaccattctgaaaatcctagagcccttaagaattatgctaaatctactctgc
ctgtgctctataaatggaacaacaaagcctggatgacagcacatctgtttacagcatggtttactgaata
ttttaagcccactgttgagacctactgctcagaaaaaaagattcctttcaaaatattactgctcattgac
aacgcacctggtcacccaagagctctgatggagatgtacaaggagattaatgttgttttcatgcctgcta
acacaacatccattctgcagcccatggatcaaggagtaatttcgactttcaagtcttattatttaagaaa
tacattttataaggctatagctgccatagatagtgattcctctgatggatctgggcaaagtaaattgaaa
accttctggaaaggattcaccattctagatgccattaagaacattcgtgattcatgggaggaggtcaaaa
tatcaacattaacaggagtttggaagaagttgattccaaccctcatggatgactttgaggggttyaagac
ttcagtggaggaagtaactgcagatgtggtggaaatagcaagagaactagaattagaagtggagcctgaa
gatgtgactgaattgctgcaatctcatgataaaacttgaacggatgaggagttgcttcttatggatgagc
aaagaaagtggtttcttgagatggaatctactcctggtgaagatgctgtgaacattgttgaaatgacaac
aaaggatttagaatattacataaacttagttgataaagcagcggcagggtttgagaggattgactccaat
tttgaaagaagttctactgtgggtaaaatgctgtcaaacagcatcacatgctacagagaaatctttcatg
aaaggaagagtcaattgatgcggcaaacttcattgttgtcttattttaagaaattgccacagccacccca
accttcagcaaccaccaccctgatcagtcagcagccatcaacatcaaggcaagaccctccaccagcaaaa
agattacgactcgctgaaggctcagatgatcgttagcattttttagcaataaagtatttttaaattaagg
tatgtacattgttttttagacataatgctattgcacacttaatagactacagtatagcgtaaacataact
tttatatgcactgggaaaccaaaaaattcgtgtgactcgctttattgcgatattcgctttattgcggtgg
tctggaaccgaacccgcaatatctccgaggtatgcctg
>TARE   Transposable element.
gaattccgcgcccgtcccgtcgccgccgccgccgccgcagacccctcggtcttgctatgtcgagctcacc
cgtgaagcgtcagaggatggagtccgcgctggaccagctcaagcagttcaccaccgtggtggccgacacg
ggcgacttccacgccatcgacgagtacaagccccaggatgctaccaccaacccgtccctgatcctggccg
cagcacagatgcccgcttaccaggagctggtggaggaggcgattgcctatggccggaagctgggcgggtc
acaagaggaccagattaaaaatgctattgataaactttttgtgttgtttggagcagaaatactaaagaag
attccgggccgagtatccacagaagtagacgcaaggctctcctttgataaagatgcgatggtggccagag
ccaggcggctcatcgagctctacaaggaagctgggatcagcaaggaccga
>HERVR   Baboon endogenous retrovirus (BaEV), internal part.
[encoded data, 7455 characters]
gatgaagaagctcaagattgagcctctaagacacaagaaaag
>HERVE   Human endogenous retrovirus; family HERV-E; internal part.
[encoded data, 7881 characters]
taagaactcccactaaaagtgaaaattctcaaagggggggaaa
>ORR1BI   Retrovirus-like internal sequence flanked by ORR1b MaLR-LTR.
gaagttggtaccagggactggggtattgctgtgataggcctgaccatgcttatgtttggaagaatgtgga
ttttgggactttggattagaaaagcagttgaatgctttaagtggggcttaatgggccgtgctagtaggag
catggaagacrgtggtgctgagggtaatttgaattgtggggacctggctcaagaggttacagaggagaag
aattttagtatgtggcgtagaggtttttcttgtgatatttgggcgaagaatgtggctgcrttttgccctt
gttcaaaaggtttgcctaaggctaaggtgaagagttggattagctgcattggcagaggatatcttacaat
tgcctagtatggattttgttgtatggttattagtattcgctcatgcaaatctacagtgaaaaggagcaaa
ctgagaaagagaaaaaatacaaaaatgcatactttgaggagaaaggaggcaccaggaagtagactgtagc
taaggcctgtgttgaaggagataaacagattagagaaaagcttgatgctaagtggaataaagggagcggt
gacctcagaccaagatcccacccagataaacttccaattttggaaaagaaattaaagaaaagtgaaaagg
aattaaagaaaagcccagggccaggcctggtggtgcacacctttgatccaagtgctcaggaggcagaggt
ttgtggatcttaaagtttaaggctggcctgttacacagattgagttttaggacagccaagcttaggcagt
aaaggaaaccatcaaaaccagctggtgaagatgtaattgaatgagtatgagaacttggcagctttggcca
catggttctggtttagagtcaaggaaagaaggaatggattatgggattgccctccttgtctaaggaaaac
tgctgaagccaggcacgtgtgatgggtgttcttgcatagaggcttaaagaggttactgtgtgaagctgtg
aaaatgamgccnnrrttgccttggaaacccaagatrttggagatgcctgksttcgtktrctgccgaggaa
agctgctaacagggagtggaaccagcccgagggagaggagtgcatggcatacaacaaagctgaaaggagt
tggagatctgaagagcgctttgacatcagacatcgagatgcagagtttggagtttgcccagckggttttc
agtcttgctttggtcccgtatttcctcactatgctcccttttcncyrttttggaatggtaatgtatatcc
tgtgcctgtgtgnyagragtatgtrayctgtttactttytgattttgattttacagaggattamagttaa
ragattgtatgagtctcagaagagactttgaactttgracttttaaacaagtttgagactgtgrtagact
atggggacttttgaarttggactgaatgcattttgcattatgatatggctacaagcctatgggggtccag
ggagtggaa
>MTAI   Retrovirus-like internal sequence flanked by MTa MaLR-LTR.
aattggtaccagcagagtggggtattcctgtgacaacctgaccatgttttggggaggactgtggaaggac
tttggaactttgggcttgaagatccatccgttgttaagagctctgtcggatgttgtgtaggagcttggaa
gataatgttgagaacactgcagaagatggaggtctggtttgtgaaatttcagagggaaaattaaagactc
ttttcagggccattgctgttttgattgtgaagattctgtagttctggttagctggggctgaagaatcagc
tgtgattaacaagataccagaactaccaaagcaaaaactttgcattactgggactattgatgctggttag
ctggagctaagaaattagcggtgattaagaagagaccagcatcattgaggtgacatcttctgggaagtgt
tttctgaaagcacaaagaggctgtgttccagagatggccaaggttgtactcctgctgcagcgggacttgg
taatatgtaagggtcacccaggtggtactggttttgaaggcatgaaggggtcacgcaaagcagctgaggc
tcggcactgtgagaggccatggaaggccattggtgaaggtgcagcctcagttgcaattgaaggcccagga
ctgaaggggtcatgcagtgttttggagatgccagtaccatgagatgaccaccaagagcagcagcagcagt
ggggtacaggcatctggagcctagaggatgacgcgtgtgctacaaagggcatggctggagaagtgaccca
agcccttggaggagcccagaagatcgtgagttggatcccagacattggacggttggagattgacttttgc
ttttgattgtgactgtgccctgatattttccctcttgaaggaagaaactgttttagtggagcccacagtt
aagagacttttaattgtaaaaagactttggattttaaaagagatggatattttaaagagattgaaatttt
aagaatatgtaaagactgtgggacttttaaagttatttagatcttggggatgaataagaatgtaagggtt
gaggcttactagtgatgtgtttgtgtgtcaagttgacaaggggtcaat
>MUSID2   SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcaagcacaaggccctgggttcgatcctcag
cacmmnaaa
>MUSID3   SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcatgcacgaggccctgggttcgatccccag
cacmmmaaa
>MUSID4   SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcatgtatgaggccctgggttcgatccccag
caccgcaaa
>MUSID5   SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcatgtatgaggccctgggttcgatccccag
catctccaaaaaa
>MUSID6   SINE element, ID family.
ggggctgggggtgtggctcagtggtagagcccctgcctagaatcccccagtgaggggctgggggcgtggc
tcagtggtagagcc
>B3   SINE element, B2 subfamily.
ggggctggagagatggctcagcggttaagagcactkgctgctcttscagaggacccgggttcggttccca
gcacccacatggcggctcacaaccgtctgtaactccagttccaggggatccgacgccctcttctggcctc
cgcgggcaccgcatgcacgtggtacacanacatacatgcaggcaaaacactcatacacataaaataaaaa
taaatmtttwaaaaaa
>RSINE1   SINE element; RSINE1 family - a consensus.
cggggccggcgagatggctcagtgggtaaaggcgcttgccgccaagcctgatgacctgagttcgatcccc
gggacccacatggtggaaggagagaactgactctgaaattcccgcaagttgtcctctgacctccacacac
gcgccgtggcacgcgcgcacacacacacacacacaca
>RSINE2   SINE element; RSINE2 family - a consensus.
gggctggggagatggctcagtnygtaaagtgcttgccgtgcaagcatgaggacctgagtttgatccccag
aacccacataaaaaagcagggtgtggyagcgcacactgtaatcccagactggggaggcagagacagghgg
atccctggggctcgctggccagccagcctagccwaatcggcgagytccaggttcagtgagagatcctgtc
tcaaaaagaaaagagggagaggacctgaggaagacaccygaggttgacctctggcyyccacatayatgtg
cacatgtgcacacatgcacacacacacacacacacacacacacacacacacaca
>RSINE2A   SINE element RSINE2 subfamily - a consensus.
tggggctggggagatggctcagtcgataaagtgcttgccgtgcaagcatgaggacctgagttcggatctc
cagcacccacgtaaaagccgggcatggtgatatacgcctgtaatcccagcgctggagaggcggagacagg
aggatccctggggctcgctggccagccagcctagccgaatcggcgagctccaggttcagtgagagaccct
gtctcaaaaaataargtggagagtgattraggaagacactcggtgttaacctctgacctccacacacaca
cacacacaca
>RMER4   Medium reiteration frequency repeat - a consensus.
tgctactttgtggttttcttcttccacccttctccacccttccaaccccyaacactagataggagagaaa
gaaagatagagggaaagagggatagatctcyttgttactactwcttyctgctgattaggggyrtcgagtt
ccttggggcaagttcaatcttcayygtcaggatatctaatttcttcttyttrtttcttctttgcncacga
ctacttaacaaaccacaacnaacagcaaccaaycaacarccgcccccccaccagcatcccaccccatctc
tcagggctctagcattcatataccctctgaaragtccccagaattccaaayrtcacacaatcncagaaac
tatctacagctggcaaaatcaygcccctgctagagcacaaggcaaatcataatcasctgctgtggacaat
ctgaagcagccccatatcccacacctgggattaaaayaaaagcacattcctatttctgtgtttttaaaga
aaccaaaattctcactaca
>RMER5   Medium reiteration frequency repeat - a consensus.
atctctgatgaggtggaatgttcaggtccagggaaaacttatcttgggctatytttagcccccttcatag
mcayccatcgcctacctctatgtttgaactaacaycctgtgactattaggtaaaacccttttagaatata
ctaatagacccctagcttccaccaaccawagctaagattatcatcagatagagctktcctcactttgcca
tagctccctaccctgtattcccaccaatgtatttgaaaattgccttratttatgactttcttttcttacc
atawaaatcatgaaactgttaccacttggaacatagcatttgagtaacttaaatccgtgctcccaggatg
gtcatcatatgctccagataactcttatccttaatgaagtgtgtttttcaa
>RMER6   Medium reiteration frequency repeat - a consensus.
aatgtaacttttattctcctgatgtaatgttgtctggaggcttacagcctccgtctgctaacctaggcct
agacctagaagcttctagctttcgtacaatcttatctaagcctagaatgttttcagcctctgagacttcc
tgctgaataagctcacccttcctagttctttctgatctctggctggttcaactcagctgtttgctcaaac
tcctctccaagctgactgattcaatctggcttctctctcctcctctcctgaattgctctgcttggcctca
aactaactctggcaatctgttctaatcttctggctccttctcattctctggcttgttctgtctttacctg

>LX4   3'-end of L1 repeat (subfamily LX4) - a consensus.
aggacccagctataccactcctgggcatatacccaaaagatgctccaacatataacaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagctggaaacaacctagatgtccctcaaccgag
gaatggataragaaaatatggtayatttacgcaatggagtactactcagctattaaaaacaaagacatca
tgaaattctcaggcaaatggatggaactagaaaatatcatcctgagtgaggtaacccagacacaaaagga
cacacatggtatgtactcactgataagtggatattagccatacagtacgggataaccatgctacaatcca
cagacgcaaagaagctaagtaaggaggaaggcccaagggaggatgcatgaatcttactcagaaagggaaa
taaaatagtcatcagaggtagatggagggagggaactgggtgggagagrrgrtggggaagggaacagnat
ggatcaggatcaggtytggggagrarcaggagagaagtacagagggccaggagantgaatggaaatccgc
gtgggggtatctctaggatgtcccagagacctgggataggggaggttcccaggagtctatgagggtgacc
ctagccgagactcctagcagtggggatatggaacctgaagaggccgcctcctgtaaccaggcaggacctc
cagtggagggacggggacaccaaccyayccacaaaaccttcgacccamaatttgtcccgtctacaagata
tgcagggacaaagatggagcagagactgagggaatggccaaccaatgaccggcccaacttgagacccatc
ccatgggaaagagccaacccctgacactattaatgatactctgttatgcttacagacaggagcctagcat
aactgtcctctgagaggctccacccagaagctgacggaaacagatgcaganacccacagccaaacattgg
acggagcttggggactcttgtggaagagtgggaggaaggattgagggagccggaggggacggggactcca
caagaagaccmacagagtcaacwaacctggacccatgggggctcwcagagwctgaaccaccaaccaaaga
acatrcatgggctggacctaggccccctacacatatgtagcagatgtgcagcttggtcttcatgtgggtc
ccgaacaactggagcaggggctatcmcaaaakctgttgcctgtccgtgggatatgttcttctagctgggc
tgccttgtctggcctcagtgggagaggatgcacctagcctcgcagagacttgatgtgccagggtgggggg
atacccagggggggccccaccctctcagaggagaaggggagggggagacgggggaaggatcgtgggaggg
ggtgaccaagaagggggcagtgagcgggatgtaaagtgagtaagtaaaaatwaataaataaataaa
>MTE   Long terminal repeat of retrovirus-like MaLR element.
tgtgatggttaatsttaattgtcaacttgacgggatttagaatcacctagraracgggcctctgggcatg
tctgtgarggaktttctwganwrgtttaaytgaggtgggaagacccgccccgaatgtgggcggyaccatt
ccctgggctggagtcctggnntgaagargtagaggaagcgagcckagcaccagcattcatctctctctgc
ttyctgactgcggatgcmatgtgaccagctgcctcaagytcctgccgccgtggcttctctgccacgatgg
actggaacctgaaactgtgagycaarataaaycctttctctcttaagttgcttttgtcagggtatctkrt
cacagcaacagaaaagaaactaagaca
>MT2A   Long terminal repeat of retrovirus-like element; MT2A.
tgtgatgrctaatcttggttgtcancttgactacatctggaatcaactaaaacccaagcagctggacgcn
cctgtgagrggttttcttgattagattatttgaggtgggaaaatncaccctaaatctgggccacactttc
tggytgcagcccgyatrraagracatggaagaaggaagtctagcttttgcttttgcctgcttgccctcay
kcttgctggcaagttcatctgtcctgctgctgaggtatccttcgctggtattaragcctacttcttcagg
attccagcatatactgaagascagcwgatctccaggactcctccataactcnagyaccaggytgggacta
ccgagacagcagcctgtgagccgttctaatcaatcccctacaaatagaacatttttcttccatcagttct
gttccgttggagaacccagactaataca
>MT2B   Long terminal repeat of retrovirus-like element.
tgtagtggctattcctggttgtcaacttgactatatctggaatgaactacaatccagaattggaaggctc
acccgtgatccagatcttgaggctgggagacacaagtttctgacctggatcttggcacggagatcttgag
gcatagtggccatgaaaancttaggcccaggcaaggtagtacangcctttaattccaggagactgaggca
aggagatctctgagttcaaggtcagcctggggcaaagcaagtcccagatccaggcatggtggtacacacc
tttaatctgggccacaccttctgctggaggcctacataaggacattggaagaaggaaggttcactctctt
cgcctgcttgcacttacttgccagcacatctgttggagcctacttcttcaggattccagcttatacagaa
gaccagctgaaacagctagcctagcgggactgagcaactactagatccttggacttcccattcacagctg
accattgttgggttagttggactgcagactgtaagtcattccaataaattccctcagtatagagagacat
tccataagttctgtgactctagagaaccctgactaataca
>MT2C   Long terminal repeat of retrovirus-like element.
tgtagtggctattcctggttgtcaacttgactatatttggaatgaactacaatccagaattggaaggctc
accagtgaccctaatctggaggctgggagatacaagtttctgacctggatcttggtatggagatcttgag
gcatagtggctatggattccagaagattaaggcagggagatctttgagttcaaggtcatcgcctgcttgc
ttcgtgagactgagtaactgctagatccttggacttccattcacagctrcnactgaaccattgttgggaa
ttggactgcagactgtaagtcatcaataaattcctttactatagagagacattccataagttctgtgact
ctagagaaccctgactaataca
>LX   Murid LINE repeat sequence 3' end - a consensus.
aggacccagctataccactcctgggcatatacccaaaagatgctccaacatataacaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagctggaaagaacccagatgtccttcaacagag
gaatggatacagaaaatgtggtayatttacacaatggagtactacacagctattaaaaacaatgacttca
tgaaattcttaggcaaatggatggaactagaaaatatcatcctgagtgaggtaacccartcacaaaagaa
cacacatggtatgcactcactgataagtagatattagcccaaaagctcggaatacccaagatacaattca
cagaccacatgaagctcaagaagaagaaagacyaaagtgtggatgcttcagtccttcttagaagggggaa
caaaatactcacgggaggaaatacggagacaaagtgtggagcagagactgaaggaaaggccattcagaga
ctgccccacctggggatccatcccatatacagccaccaaacccagacactattgykgatgccaagaagtg
catgctgacaggagcctgatatagctgtctcctgagaggctctgccagagcctgacaaatacagaggcgg
atgctcgcagccaaccattgaactgagcacggggtccccaatggaggagttagagaaaggactgaaggag
ctgaaggggtttgcaaccccataggaagaacaacaatatcaaccaaccagacccyccagagctcccaggg
actaaaccaccaacmaaagagtacacatggakggaccyatggctycagccgcatacgtagcagaggatgg
ccttgtynggcatcaatgggaggagaggcccttggtcctgtgaaggctcgatgccccagtgtaggggaat
gccagcggrgaggcgggagtgwatgagtgkgtgggtgggggagcaccctcatrgargcaggggrcaggag
gatgkgatagggttytcggagggraaccaggaaaggrgataayatttgaaatgtaaataaagaaaatatc
caat
>LX2   Myomorph LINE1 repeat, 3' end - a consensus.
tagayayyatgtagcaatraaatgantcytratgatattctgctatactcatagattagtgcctagctya
gccatcatcagagaggcttcmtcctgcagcagatrgraacaaatacagagacccacagccaagcactgag
ccgagctccwggagtccagttgaagagagggaggagggattrtaggagcaaagggttcaagaccatgatg
gggaaacccacagagacagctgacctgagctagtgggarctcatggaccctggactgacagctaggaawc
cagcataggactgaactaggccctctgaangtgggtgacagttatgtggcctgggcagtctatggggcct
ctggcagtrgaaycagtacctatccctagtgcacgaatggactttgggagcccattccctatrgtgggat
acactctcagcttagatacanggggaagcgtctaggtcctgccccaaatgatatgccagactttgttgat
ctcccatggaaggcctcaccctccctggggagcggawggratgggattggggatggtgggggggattggg
aggaggggagggagagggaactgtgattgggatgtaatataagataaaaaattaataaa
>LX3   Myomorph LINE1 repeat, 3' end - a consensus.
atrggaakggggggttcaggatcargtgtggggagrgrcaggrkagrgggccagatggccakgagaatga
ayggaaatctgcggntgnnnagagtgtgggggtgcggggcatctytaggacgagmcagagacctgggawr
ggggaggctcccaggagtcaatgkgggtgaccytagctgagactcmyagcarcgggngatatggaaactg
aagtggycacctcctgtagccaggyaggamytccagtggagggatnaggacaccaacccayccacaaaay
ttntamccaaaatttgtcctgtctacaagatgtgcagggayaaaratggagcagagaytgagggaatggc
caaccaatraccggcccaacttgagacccatcccatgggagagmaccaanccctgacactattgatgata
ctctcttatrctcgcagacaggagcctagcatagctatcatcggagaggcttcatccagcaantgatgga
aacagatgcagagacccacagccaaacactaggccgagctccaggagtcccgttgaagagagagaggaag
gattgtaggagccagagggttcaaggacaccgacggraaaacccacagaaacarctaacctgggctcgtg
ggarctcacggasactggaccaacagctaggaagcctgcatgggtctgamctaggccctctgcatatggg
tgacagttatgtagcctgggcagtctatggggcctctggcagtrgaaycagtacctatccctagtgcacg
aatggactttgggagcccattccctatrgtgggatactcwctcagcctagayacanggggaagggcctag
ttcctgccccaaatgatgtgacagactttgatgatctcccatggaaggcctcaccctccctggggagcgg
awggggratgggatgggggagagaagaggtggagaggaaggattgggaggggaggaaggaggggaaactg
tgattgggatgtaatataaaataaaaaattaat
>URR1   Rodent-specific putative non-autonomous DNA transposon - a consensus.
tagggcagtggttctcaaccttcctaatgctgcgaccctttaatacagttcctcatgttgtggtgacccc
caaccataaaattattttcgttgctacttcataactgtaattttgctactgttatgaatcgtaatgtaaa
tatctgatatgcaggatatctgatacgcgacccctgtgaaagggtcgttcgacccccgaaggggtcgcga
cccacaggttgagaaccgctgctgta
>B3A   SINE element, B2 subfamily.
ggggctggagagatggctcagcggttaagagcacttgctgctcttgcagaggayccgagttcggttccca
gcacccacatcaggcggctcacaaccgcctgtaactccagctccaggggatccgacgccctcttctggcc
tctgtgggcacacgcacwcacacgcgcacacacacacatacacataaaataaaaataaatmtttwaaaaa
a
>L1MM_F   LINE1 repetitive element 5' end.
atcgaattcagtcagttgaacacgtgagccaaaataccatcaaggcaagcacattaaatactgagtctga
catagtatttttaaattaaacacaccagtccattgaagcgcagattcaatattaaatcaatgatgtcgca
tgtagagcagtcttataaagtgccatatgatatattaaatctaatttattagaaactaatatctgagaac
cagacagatcactttttgctggtaatatgtagctgatctttcaaatcagacacttattgaacaaaatcct
cagtcctgaataccacaaaacaaaacaatataacacagtttttctctgagatttaaaaaacaaaaacaaa
aacaaaaacaaaactcaatatggtaatgagataaaaatagacttaaatctctaagaacacttacatttaa
gaaaggaatattataaaatgctaactagggttcctggattctgccgagactagtctgcgcaggtgagagt
gtggtctacagaatttaacagcttctggaacaggtggaaaccatggagcttctgaggcagaccgcgtttt
ggggctccagacatctgtgcaccttccctgccagaggagaggtgtccgccctgcctgggagggctttgcc
acagcacctaggggagacatcttggttcctgggtcccaccaagactagtctgtgcaggtgagagtatgga
ctatagaagctaacagcttctgggacaggcagaagccacagaacttctgaggcagaccctgttttgggct
ccagacatccggacaccttccctgccagaggaaaggtgtccgccctgcccgggagggcattgccagagca
cctgggggagccatcttggttcccagatcccaccaagactagtctgcgcaggtgagagtgtggactacag
aagctacgcagattctgggacaagccctgtttcaggccttcatcttctgccaggaggcaggtcggaacac
cagatatctgtgcaccttccctgcaagaggagagcttgcctgcagagagtgctctaaccactgaaactca

>L1VL1_5   LINE1 repetitive element 5' end.
tatcagaaattgaagtggaaatatttacaacttcatgctaaggttgggtttggcccatggtagtctccat
ttagatgaatataagtatgtatattattgaattaattgtgtaatgtagaaaataaagatgcagaaacagg
cctaaccagggcaacaagtcccttctggtcagcaccagcaccttgggcaaggagtggcagacacacccat
ggtccctagaggactctccaagtgatcttagtcactggtgaacagaacacaacttcagtccaatccaatt
atgactggcctgtgacagcaggacaaggacaccggaacccttcctgaacagaggttcagattccttttga
tcagttctggttacggtttcaaacagaccacacagctccacagtcctcaaaggagacaccaatttccagg
catgtaacatgcccaggatcttaggacaactgaatcccagaataacaagagctggtcacaccagtatttn
agggtctcagaggagcttgactgccaagaactagacacacccagaatctcaggttcacaggatcccagaa
tcaaaggatcacagagaaagctggactctgaggagtcctgaatcaaccgggattataggaaggacaggct
ccaatcagatatatcgagggcagcaagcactagagataatcagatggcggggggcaagcgtaagaacaga
agcaacagaaaccaaggttacttggcatcatcagaaccaaactctcccaccatagcaagtcctggataca
ccatcacaccagaaaagcaagatacggatctaaagtcacttctcatgatgatgatggaggactttaagaa
ggaatacaggaaaacacaggtaaacagctagaagcctttaaagaggaaacacaaaaatcccttagagagt
tacaggaaaacaataccaaacaggtgatggaaatgaacaaaaccatccaggatctaaaaatggaaataga
aacaataaagaaaacacaaaggagacaactctggagatagaaaacctaggaaagaag
>L1VL2_5   LINE1 repetitive element 5' end.
ggatccaggggtgcaggaacccctgactagccagtggcacaggttccttccagtctgggccagtgcccta
agcagaccttgggtgcanactctgcagccagtcccacaacacccagaggaagctccactcccaggcgccc
taacacgcccaggatcacaggatccaggagcgaagaggacacaacatccstcccaaaagcacnnnnagta
actgggaccaataggatccagngatncaggaaccccgcccagccagtggcacaagttccttctagtttgc
gcctgcgcccggagcaaacctagggctcwggctccccacccactcctacaacacccagaggaagctcgac
tcccaggtgctctgacacgcccaggatcacaggatcccaggatcccagaagcttggtcacaccaggatct
cagggtcccagaggcagcttgactcccaggagctctgacacacccaggatctcaggatcacaggatcaca
gaatcacaggatcacagagacagctggactctgaggaattctgacacaaccaggatcacaggaaggacag
gcttcagtcagatatantgaggacaggcaggcactagaga
>LX2B   3'-end of L1 repeat (subfamily LX2B) - a consensus.
cctgtctgaaagaactacagggacaaaaatggagaggagcctgaggaaaaggacatccagtgacaggccc
aaagtgggatccagctcaaggggaggtcccaagacctgacactatcactgaggctacggagcgctcacaa
aaagggacctagcatgactgccctccgaaagacccaacaagcagctgaaagagtcagatgcagatatttg
cacccaatcaatggacagaagctgctgacccctgtggttgaattagggaaaggctggaagaagctgagga
ggagggcgaccctgtaggaggaccagcagtctcaattaacctggacccctgagatctctcagacactgga
ccaccaaccaggcagcatacaccagctgatatgaggcccccaacacatatacagcagaggactgccgggt
ctgtgttcagtcagagawgatgcacctaaccctcaagagactggaggccccagggagtttagaggtctgg
tggggtggggngtggggacatcctcgtggagacaggggtacgggcaggaggtatgggatgtggaacagtc
agagggtggaccgggagcggaataaaatctggagtgtaaaataaaaaaaaa
>LX5   3'-end of L1 repeat (subfamily LX5) - a consensus.
aggacccagctataccactcctgggcatatacccaaaagatgctccaacatataacaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagctggaaacaacctagatgtccctcaaccgag
gaatggataragaaaatatggtayatttacgcaatggagtactactcagctattaaaaacaaagacatca
tgaaattctcaggcaaatggatggaactagaaaatatcatcctgagtgaggtaacccagacacaaaagga
cacacatggtatgtactcactgataagtggatattagccatacagtacgggataaccatgctacaatcca
cagacgcaaagaagctaagtaaggaggaaggcccaagggaggatgcatgaatcttactcagaaagggaaa
taaaatagtcatcagaggtagatggagggagggaactgggtgggagagrrgrtggggaagggaacagnat
ggatcaggatcaggtytggggagrarcaggagagaagtacagagggccaggagantgaatggaaatccgc
gtgggggtatctctaggatgtcccagagacctgggataggggaggttcccaggagtctatgagggtgacc
ctagccgagactcctagcagtggggatatggaacctgaagaggccgcctcctgtaaccaggcaggacctc
cagtggagggacggggacaccaaccyayccacaaaaccttcgacccamaatttgtcccgtctacaagata
tgcagggacaaagatggagcagagactgagggaatggccaaccaatgaccggcccaacttgagacccatc
ccatgggaaagagccaacccctgacactattaatgatactctgttatgcttacagacaggagcctagcat
aactgtcctctgagaggctccacccagaagctgacggaaacagatgcaganacccacagccaaacattgg
acggagcttggggactcttgtggaagagtgggaggaaggattgagggagccggaggggacggggactcca
caagaagaccmacagagtcaacwaacctggacccatgggggctcwcagagwctgaaccaccaaccaaaga
acatrcatgggctggacctaggccccctacacatatgtagcagatgtgcagcttggtcttcatgtgggtc
ccctaacaactggagcaggggctgtctctgactctgttgcctgcctttgggttccgttcttctagctggg
ctgccttgtctggcctcagtgggagaggatgtacttagtcctgctgcgacttgatgtgccagggtgggtt
ggtacccawggggggctttcccttctctgaggagaaggggagggggtaatgggggaaagagcgtgtgagg
gtgkgactgggaggagaggagggagcgggatgtawaatgtggatgtaaaaatwaataaataaataaa
>LX6   3'-end of L1 repeat (subfamily LX6) - a consensus.
aaacaacctagatgtccctcaatcgcaggataggtaatgaaaatatggtacatttacacaatggaatatt
actcagctattaaacatagattggtaatagattggtaatagattccactgtgaaaattgaattatgaaat
ttgcaggtaaatagatggaactaaaaaaaaatcatccttagtgaggtaacccagacccaaaaaaacaaat
atngtatgtattcccttatatgtgaatattagcttttaaatcatcgatagccatgctacaatccatanaa
ctacagaggttcagtattgagtkagtgaactagggktgaggggaaggtctcsttgaatggggaaacatag
aatagattgtaaaagagacaggatgagagtggaacaggagagaaggacggaagaaaggaggatgggagag
gatatggggagagagaacaaatactaatacttaactaatacaaatacttaactaagctccaactaawacw
aagggccatttcggagntcatatggaatcctactacagtagaagctttttaaaatatatacgtacatgga
ggtaatctaagtgaaatnatcaaataatagggagacaaagccccaactagccatctcttgtcaccaaatg
aaacttccagtaccaggaatgggttacatctaattgagttgttggccaaagaggtcccataggaatcccc
aaacaacccaggctgttgtcaaggatatagnttgctttccacaaactgatggcaaagccctatttctgaa
gacaacacatacacaactcattgaacatggagaaatcgagccggtgcctacatagaaccttcacccctac
gttctagtgtctttggtacgggaaggtactctgcgggctaccaaaagagaaacgtaaacaccaggccagc
cacaaaacctttgatctacaatctgtcctgcctgcaagatacgctagggcaatggtggcacaaagcttgt
gggagtaaccaaccaatgtctaatttgacttaaggcccactccacgagaaggaacccatacccgacactg
cttggatgaccaagaaccagagactagatagcccagaggcctagggtagaaccaaatactgctgttctaa
aaacagaacagtagcgataaaatgactcctaatgkcacattctgctatactcatagatcagtgccttgct
cagccatcatcagagaagctccatccagtaactgatgggaacagatgcagagacccacagccaaacatta
ggcagagctcagggaaccccagggaagaggaggaggaaggattgtaggagccagaggcatsgaggacacc
aggagaacaaggcccwcwgaatcaactgagcagggctcatatgagctcacagagactgaagcagcacgca
cggagcctgcatgggtctgcaccaggtcctccgcatatatattatagcttccagtttrgtgtttttgtgg
gattcctgagagtgcgaacgagtgggtctctgattcttgtgcctgcttttggggctctttttctcctatt
ggtttgccttgtccagcctcgatgtgagggtttgtgcctaatcttattgtattttgttatgccatgttcg
gttgatatctctgggaggcctgctcttttctgaagggaaacagaagaggagtggatccggatgggagggg
aggtgggggggaactgggaggagtagagggaggggaaactgtagtcaggatatattgtatgagagaagaa
tctatttttaataaaa
>LX7   3'-end of L1 repeat (subfamily LX7) - a consensus.
aaacaacctagatgtccctcaatcgcaggataggtaatgaaaatatggtacatttacacaatggaatatt
actcagctattaaacatagattggtaatagattggtaatagattccactgtgaaaattgaattatgaaat
ttgcaggtaaatagatggaactaaaaaaaaatcatccttagtgaggtaacccagacccaaaaaaacaaat
atngtatgtattcccttatatgtgaatattagcttttaaatcatcgatagccatgctacaatccatanaa
ctacagaggttcagtattgagtkagtgaactagggktgaggggaaggtctcsttgaatggggaaacatag
aatagattgtaaaagagacaggatgagagtggaacaggagagaaggacggaagaaaggaggatgggagag
gatatggggagagagaacaaatactaatacttaactaatacaaatacttaactaagctccaactaawacw
aagggccatttcggagntcatatggaatcctactacagtagaagctttttaaaatatatacgtacatgga
ggtaatctaagtgaaatnatcaaataatagggagacaaagccccaactagccatctcttgtcaccaaatg
aaacttccagtaccaggaatgggttacatctaattgagttgttggccaaagaggtcccataggaatcccc
aaacaactcaggctgttgtcaaggctattgnttgctctccacaaactgatggcaaagccctatttctgaa
gacaacacatacacatctcattgaacatggagaaatcaagccggtgcctaaatagagccttcacccctac
ggactagtgttcgtggtaggagaaggtactctgcgggctaccagaagagaaaggtaaacaccaggccagc
tacaaamcctttgatctacaatggtgacctgcctgtatgatacgctagtgcaatggtggcacaaacgttg
tgggagtaaccaacctatctctgattggacttaaggcccactccacgagaaggaacccatgcccgacact
gcttgggtggccaagaacctgagactagataggccatgggcctaggggaaaaccaaatactgctgttcta
aaaacagaagcgtagcgataaaatgactcctaatgacattctgctatacccatagatcagtgccttgctc
agccatcatcagagaagcttcctccagtagtagacgggaacagatacagagacccacaaccggaaaacgt
gcagagagtgagagactttggaacacccagtcctaaatggaatgcctccatcaaaccccttccctcagag
ctcagggaaccccacagaagagaaggcagaaggattgtaagagccagtaggcatggaagacaccaagaaa
acaatgccctctgaatcaacaggaccgatctacatgtgaactcacagagactgaggcagcacgcacgggg
cctgcacgggacctgcacagacggagtcccagwgctgaaaggaggagwtggacacawactcccatcccta
atcaagaagttatctccaattgacaaccactcgcaaakgaaaattkagttttctccaagggagtctcact
ggggawacaaaccacacttaagggcaggccccatgcccagcagtagatggccaacasaaaacaaactcaa
cagtatttttggagatktcttgtctcataacgccatatcwgggcnccatctttccctacaggtcctccgc
atatatattatggcttccagtttagtgtttttgtgggattcctgagtgtgtgaacgagtgggtctctgtt
tcttgtgccctttattgggctcttttctcctttttgtttgttttgtccatatcccaatgtgttagttttt
gcttaatcttattatattttattttattattgtcccttagaagcctgtttgttttctaatgagagacaga
aagggagtggatccggatgggaggggaggtgggggggaactgggaggagtagagggaggggaaactgtaa
tcaggatatattgtatgagagaagaatctatttttaataaaa
>LX8   3'-end of L1 repeat (subfamily LX8) - a consensus.
aacacaagagaaaaagaagaaagaagataaataccactaaggatnttcgaaangctctaaggaatcatat
tattttatktttacctgaaatgtgtgtgtgtgttaatttaaatgaagttatcccacttgggstgataatg
ctccctccaagagccaaagaccatctaacaaaancccmaacaccaggcatgagaarccctctttcgagtt
gttggtcagggkwktccaagagactcccaaaacaatatgggctattgctattgccmttggttgtcccagn
agaggtagaaggtaagtccctwttgctgaagacaccatgcacttcggacacaggacccagaggmccctga
gctggaactgacctgaawatcttctccctgaggactagctttcatggtaccagaaggtgctatgcaagct
tccaaaggagagaggcaackaacagtccyacccagccgtgatgcctatgaaccacatcaacgaccagcat
ggcacaataaccccaagggtgcagtagtggcackcacaccttggcggtaaccaacagctctctaattgga
cttaagrcctgctcaacaagagggaaatcatacttggtactgaaaacccggctaaatacccatggctggt
gargtcatgggccttagaggagaacctacaaccgccactttactaaaccagtacaatncctaactgcatt
ctaaatatttatccttatacccacagataggtgtagtcctcacccctcatcaaggaaacttctctttgca
acagacagagaccattacagaaaaccacaaccaatcaaaatgcagagttgtggagcccagtcccagcgga
tacatctacaaaacaactcctgcacctaaggctcagggaacatcgcggaagagggagcagaaagattgta
agagccagaggatcagggagtttggtgtgagactgtgtctcctagtaatgtcagaagctacacccatgag
gtctcaccaacatgactgcctaaacatgagctgagcaaggacgacagcaatggacacgctaaagtggaca
ggggaaagctcaccaagcctcaaccctacacaaagaactacaggcaactaaggaatgctgagagtgggag
aaatagtcttcccccgggaagagcacatcaattggttatccaataccaaatggtcagccctgaaaacata
yacayacaagtaacattatacagactgagcaggttgtatttatgtatttangaatagatryryryryryr
yryryryryryryryryryryryryryryrcaattaawgaaaaaagaggccatgaatttgaaaagaagca
wggaggnntatatgggagggtttggagggaggaaagggaagggagaaatgntgtaattatattataatct
caaaaaataaaaa
>LX9   3'-end of L1 repeat (subfamily LX9) - a consensus.
gntggacaatgctcctcccagaagacataggtcaccaaatgaaaatctcagcgccaggtacgggmtacct
ccttatgagcgattggtcagggaggccccgtaggcgtccaaaacaatacaggctgttgccattgctcttg
gttgcccaccagaacttgatrgtaagaccctattgctgaagacaccacacactttggtcgcaggacatag
agaaatcaagttggarctgagctggaagcctcctccctgctggctagctttcacagtgccagaaggtgct
atgcaggctgccgggagggaaaagtyatcaatggtcttacccagtgctgggccttgaatgctacaatacc
aatctaccggtgcaatagtggcatractgctatgggggtaaccaaccgctttctgattgtatttgaggcc
tgctccacaggagggaattcattcttggtactgtaaacctggtcaaaagcctatggctgkggaacgtcat
aggccctaggggagagcctactactgttattttgctaaatggtcatgttgtcaaactgccttctaaatat
ttatgtttatacccatagattagtgctgctctcaactttggtcagagaagttcccttttgcagtgggcag
cggttagcgcagagactcataactggtcaaagtgctgagaataartgactgttgagtgctcagccctaaa
tgggacatctatattacnnacattccgagctctcagggaacattgnggaagaagaggcagaaagantgta
agagccggaggatgggggggagtgctgtgaaatgctgtcttctgracatgacatggccattacactcacg
aactcatagcagctgtggttatctgcacaagacctgcataagatcgagccagtcaacattycatcataga
tggaggagaggctcatgaggccccaccccactgargagctactggcagctgatrgywgctgggggaggag
tcatttttttttgnnggtgtggtcactggtaggttgcccatgttccagtggatggccccacacccacata
catgtaggwaagacttattggaytcagtgggttatcaaaaaaaggggacaaggaacnaaagaggatatga
agktggcggagggacatgktgggggaatttgggtggagttgaaggggagaaatggaatgtagttatgatc
atatttcattgt
>MERVL_LTR   Long terminal repeat of endogenous retrovirus.
tgtagtggttattcctggttgtcaacttgacaatatttggaatgaactacaatccggaattggaaggctc
agcagtgacccttatctggaggcttggagatccttatctggatcttggtttgaagatcttaagccatagt
ggctatggattccagaagattgaatctccgagtttaaggaacacacctttaatctgggctgcgcctttca
tctgggattaaaggtgtggtgggacacacctttaatctgggctacaccttctgctggagacaatataagg
acattggaagaagggagtctagctcttgctcttgttccttcacctgcttgctgcgtgagactgagtaatt
gctagatctttggacttccattcacagctgcgactgaatcattgttgggaattgggctgccaactgtaag
tcatcaataaattcctttactatctagagactattcataagttctgtgactctagagaaccctgactaat
aca
>MERVL   Internal sequence of endogenous retrovirus.
[encoded data, 5538 characters]
tgtgtcaagttgacaaggggtggat
>RLTR8   Long terminal repeat of endogenous retrovirus.
tgcacatctgttgggagccaactcttagcagaaagcggctatcatctctgcagccatctcgggctattta
cttacaggtggtacttttccaccctgatgagagacttgttttcctagcatgatgtttttgcaagaagccc
accacagctgaacacactctgataacatcttgtttttctcctacacatcctggacctgtggttaagtgtc
tccagctgcactccccagcttgtgcttatatacccatagttgcctttcaataaatgagacttgatcagac
agmccgtcctgtctccattcttcgwgtctcttgcccctccgtccccactctctcccttgcagaccccgtt
gactgacccg
>RLTR9A   Long terminal repeat of endogenous retrovirus.
tgtgccytcycccagccttgagcgggctgawtcagaccttgtttwtgccacagccggctagcccacctag
ggtggagtcttccgacctaggtaaagtctattgtctgccacatctgcagcttcctscaagacgccactac
ctgctgagmggctgagcttgttctaaggagatcctgacaagccacgagatcctggcatagtgggggatgg
gctcccccccttttaaggttcagacccaaaaagtaaasattgggccttgatcagagaactttgtcttggc
tccttatttctctcgccgcccttcccatccaaccccagctttcctttcaggaacccaggaasccatggcc
gctggcggctaca
>RLTR9B   Long terminal repeat of endogenous retrovirus.
tgtagcctccccagccttgagcaggctggctcagaccttgctgccactgagaatgagaccacctggggtg
gagccttccsacctagatggttctattgttctgtcacctgccgctgttcttctccaagacgctgctaccc
gctgagaggctgaacctgttctcctgagacattcctgagatagctgacaacctgtggaattgncgacntn
ntgctaaacagctgtgkcagacaaattgcttacaggctakcaacaaaccttcagagtgtgatctgcaggg
gatttccccctttataagcacagactcttagtaaacattgggccttgatcagcaatntgtcttggcctcg
tttcatactctcacgttctctcccwtacagctccggcctgcccactcaggaacccagtttgtgtggctgc
aggcggctaca
>RLTR10A   Long terminal repeat of endogenous retrovirus.
tgtggggagcgggtgtggcggcagtcccaaaggcgccagggactgcagctaagtcatatgacttgcacct
gacttcctcatataaaccacaaacatcttgagwgctgcgcaggtgtaccaggatacaggtgaatccawtt
tggtggagatwtacccctgctgccctgattagctgaagctgcgtgcctggtgaggtggcgtggcctgctg
tgcgtggatgggaactgagagtatawaagagtgagaggcccagggttcgggggagatataaaaacaaggg
agatataaaaacaagggagatataaaaacaggggagatataaaaacaagggagatataaacaagggagat
ataaacaagggagatataaacaagggagatataaagaaagaagaaacaggactgaataaacgtgtgcaga
aggatcctgttgcggcgtcgttcttcctggccagttgggcgcgcgcaaca
>RLTR10B   Long terminal repeat of endogenous retrovirus.
tgtgaagccgttgcagagtggcagttgcagagtggcagttacagagtggcagttgcagggtggcagttgg
ctactgctggccaccacacatacataggcagtaaaggttcttttgccaagatgaggttttgagaattgac
caaagttaaccaatcagatgagagacaagttaaccaatcagatgagagagaacgcctctcctaggcctat
ataagcagcaccagttctgggctcggggtctcttcgcctctgcaatcaagctctcccaataaacgtgtgc
ggaaggatcctgttgcagcgtcgttcttcctggccagtcgggcgcgcgcaaca
>RLTR11A   Long terminal repeat of endogenous retrovirus.
tgttgaggtttggtctkttgctatgtattgtaatgctaaacactggcccccaagacctggttgcccccag
ggatgagaatccgcacatacacccaagtgatgctatgtgaccttgcccccaagttatctctgattggtga
ataaagatgcctacagcttatagctgggcagaagagagatgggcggggtttgggttcccgggcttggggt
cggaggagaaccacgaggagggagagtgtaggwgaagagagagrgaagccgccatgggttaggtgagtca
tgaaaacatggccatgagggctggccaattggagttaagagcagcccagatgaaacatagcaagtwataa
ctcgggttatcggcaggaaagtagattctaatagcgtagagggtaggtatctgcccagctcttgtgctgw
ttaaggcttattgtaaatataaaggttgtgtgtgtcttttatccgggaactaaatggtcaaaggcggagt
agaaaccccaggtcgagattaaataatttctacaaca
>RLTR11B   Long terminal repeat of endogenous retrovirus.
tgttgaggtttggtctgktgctatgtattgtaatgctaaattctgtatccgaagatctaggcctacgagt
gaattctcacatntacaagcntttgttgtgcaaaccttgttccttaatttaaaactattggttaaataaa
actggctacagccaattactggaggaattagaggtaggtgggttttgagttacctggttgggggtgagag
aaggaagaaaannaggaggrgagaggaggaagccgccatcgaaggggagaagggccatgagcacatagcc
aggagaaacagcaagtatctggggtacaccgtggggaggtagccaggccagcagttagaagagtagatta
ggggttaccccccagtaattatcaaagccaaataaaataaccatagtctgagtctcatttatttgtaagc
tagtcggggataagcttacattggttgtactaca
>RLTR12   Long terminal repeat of endogenous retrovirus.
tgtaggsataatgtttttgtgcactgtgtaaaggttrtccttgtattattcaaatgctgatttctgtgcc
ckcannacttattcgatctggntacagcattgtaatatttntgttaagaatctcctgtctcaatgttgtg
taaacattgttcwccatcayyctctgmytkgtcaataaaggctgatcagccagtgrctgggcaggataga
gaatagggcgggacttcctccaagccaggggaaggggcaggakagagatgagtggagatttgacttgggg
agagagtccaggagataccataagaaaatacctagaacccagagagccagatcagtactaaaatgcaaat
atca
>RLTR13A   Long terminal repeat of retroviral-like element.
tgaaatgccagggactccggtggagtcagcttgacagatgaaagtctgaaagctttctcatgaggaaaga
gtttcaaggaaacttactcccggatctttggctattcccctaacccataaaattaattttccattcccac
attagtctagtgtatggatccacgtgcactctatatagtattaccttatagtaaatgccttttaagattg
tattctaacatagctaaagccttttcccagtgttcttagattccagatagcagcaaggagcttaacccat
tcagtaactaattaagctctaccataaaacaataaagcacttgccattaactcagctgtttgcagataga
gactaaaagtctcactgagatagaaatcttttactacaggctacattccatgtcaagtataagttgatat
actaccctgataagggagaactctccagacaagataagttttactagacctaagaatttagagctctgtg
ataccacattactcttaaggcctgtcaagagttaacaaccccctgatgcttttaaccttaaagtgtgaaa
ttcttgcctggcattaggctgatcctaggcagggcttgttatccctaatgtaaacatttaattagtccct
gcaaattcctttctgctgtaactggtgaatttcagtgtatcttgtcttttgtgatttgtatcctttgata
attcgttgttatataagtctgaagctcaaccagaacattacattcagattcaacacctctcttgtgtgtg
cctgtctgtcacttcatccgactcttttgcccatctgcctaagaaatcccgttcctcgcagaccagggac
ccagatggtctgcggca
>RLTR13B   Long terminal repeat of retroviral-like element.
tgaaatgccagggactccggtggagtcagcttgacagatgaaagtctgaaagctttctcatgaggaaaga
gtttcaaggaaacttactcccggatctttggctattcccctaacccataaaattaattttccattcccac
attagtctagtgtatggatccacgtgcactctatatagtattaccttatagtaaatgccttttaagattg
tattctaacatagctaaagccttttcccagtgttcttagattccagatagcagcaaggagcttaacccat
tcagtaactaattaagctctaccataaaacaataaagcactagccattaattcagctgtctgcagaaaga
gtctggaattctcactgagatagaaatccttattacagactacattccatgccaagagcaaattggtata
ctatactgataaatggakaktctccagatatagataagaattaacgaggcctagagaattttggggtcag
tgacactacattattcttgaggcgtgtcaagagttaactaccctggtgctattaactctaagtgtaaaac
tcttgcctggcagaaagtgctaatctctagtgtaaacatttatctggtccctacaaattccctttgtagt
cactccccttgcatctgtgctaatctctagtgttaaacatttatctggttccttttgaagtcactccttt
tgcacctggaaaaattcaatgtgccttgttctgttatgatttgcaatttattctgtattataaaagtctg
atgctcgactggaacattacattcagattcaacacctctcttgtgtgtttggctgtctgtcacttcatcc
taatctttgcccatctgctctagagacccgttccacgcagacacagggacccagagggtctgcggca
>RLTR13C   Long terminal repeat of retroviral-like element.
tgctacacccactccagtgaagtctgcctgacaggcccaaaagcctggacacagtcccgaggcaaaaagt
ttcacggaaacttagtctcctggaaccttggcatcccgtakcacgaatgctccaaacttgtccctgcgtt
agttggtgaatggatctgcgtgctttcyttcagtattgttttattataggtgcctccaaggaatgatttg
wcaaatasctaagctagattgaactttgcttcctggccttcwccagtgtcctaggcagtccttgagccga
ccctgggcttggaattcagtaagaatgttacycattcagtcaaaatgcctccagtgttgatagagagata
gtgaaagaaatcaggcattacagtttgccggataggagctagaaatctcagggcwagttcaacaaagtaa
actcagaattctcattacagwcatgaatggcagcctacattacataatagtagaaagaaggtgggttgtg
gtttaaggaggaactagagtattgtattattcatgaaagagttagtagaacagaactcccctggtgcatg
tttttcactaggcccagaggaatagcataattaggtatttactaagggacccctggtggtgggtttaaca
atagactagcattgcacctgggtgttagccttttcacctggctcctaagaatggctgattttagatagag
ctgttnttgtcccagttgtaaatantgcccggttcccgtcaccttttatgtwtgcattcctctgttttgt
gtaagagtcattaagcatccggtaacctcattgtaccttgctgatgtgtcacctaacttccctattttct
tctgtatwaaaagtytgatgctcgatttgacaaattacattcagatacacactctctctgtgtccatgtc
tgtttgtcattcatcgccgactccttgcccacctgtataccgagaccctgattcmcacggatcgaggagg
gcccactgagcccagtctgcggca
>RLTR13D   Long terminal repeat of retroviral-like element.
tgctacacccactccagtgaagtctgcctgacaggcccaaaagcctggacacagtcccgaggcaaaaagt
ttcacggaaacttagtctcctggaaccttggcatcccgtakcacgaatgctccaaacttgtccctgcgtt
agttggtgaatggatctgcgtgctttcyttcagtattgttttattataggtgcctccaaggaatgatttg
wcaaatasctaagctagattgaactttgcttcctggccttcwccagtgtcctaggcagtccttgagccga
ccctgggcttggaattcagtaagaatgttacycattcagtcaaaatgcctccagtgttgatagagagata
gtgaaagaaatcaggcattacagtttgccggataggagctagaaatctcagggcwagttcaacaaagtaa
actcagaattctcattacagwcatgaatggcagcctacattacataatagtagaaagtgactatcactta
gaataaaagccgagtcgctcccatatacaggaatttacaatggtttaggaagtagatcgggctgtggttt
tagagtattgcattattcatgagaaggttagctagagcagaactccctaattagaaccatgacttgggcg
tgaaagcccttgccctgggagtgtaaagacctcacacctggctcctaagaatggctgattttagatagag
ctgttnttgtcccagttgtaaatantgcccggttcccgtcaccttttatgtwtgcattcctctgttttgt
gtaagagtcattaagcatccggtaacctcattgtaccttgctgatgtgtcacctaacttccctattttct
tctgtatwaaaagtytgatgctcgatttgacaaattacattcagatacacactctctctgtgtccatgtc
tgtttgtcattcatcgccgactccttgcccacctgtataccgagaccctgattcmcacggatcgaggagg
gcccactgagcccagtctgcggca
>RLTR14   Long terminal repeat of retroviral-like element.
tgtaacaggcccccagaccttagcacaactgactccatgatggaagtaccattcaggccgtaaaactcag
cacgtagacagcaccacctgccaaaacgaaaacaaagacctaatccatcaaagtccatagttctgggaaa
gtctctaaatgtactaaccttgctttttggcttctgtagttctgcttctggctaactgttcttgttaact
gaagtatgtcaacccaggatatggtttttgtgcttaaaagctcaccctgagaaaggctcagggctacact
gggatcccaaacacccagtgtagtcaccagccggctaataaagactttctattggcttaaacccatgtcc
gagcagtcttctccggtggataccccacaaca
>MMVL30   Internal sequence of mouse VL30 retro-element.
tttggtgcattggccgggaaacagcgcgaccacccagaggtcctagacccacttagaggtaagattcttt
gttctgttttggtctgatgtctgtgttctgatgtctgtgttctgtttctaagtctggtgcgatcgcagtt
tcagttttgcggacgctcagtgagaccgcgctccgagagggagtgcggggtggataaggatagacgtgtc
caggtgtccaccgtccgttcgccctgggagacgtcccaggaggaacaggggaggatcagggacgcctggt
ggacccctttgaaggccaagagaccatttggggttgcgagatcgtgggttcgagtcccacctcgtgccca
gttgcgagatcgtgggttcgagtcccacctcgtgttttgttgcgagatcgtgggttcgagtcccacctcg
cgtctggtcacgggatcgtgggttcgagtcccacctcgtgttttgttgcgagatcgtgggttcgagtccc
acctcgcgtctggtcacgggatcgtgggttcgagtcccacctcgtgcagagggtctcaattggccggcct
tagagaggccatctgattcttctggtttctctttttgtcttagtctcgtgtccgctcttgttgtgactac
tgtttttctaaaaatgggacaatctgtgtccactcccctttctctgactctggttctgtcgcttggtaat
tttgtttgtttacgtttgtttttgtgagtcgtctatgttgtctgttactatcttgtttttgtttgtggtt
tacggtttctgtgtgtgtcttgtgtgtctctttgtgttcagacttggactgatgactgacgactgttttt
aagttatgccttctaaaataagcctaaaaatcctgtcagatccctatgctgaccacttcctttcagatca
acagctgccctgcctcccactccaactccagagagcagccagcgggtcacagtggtcccgcccatgaacc
tggagcctagggaaaaatgagctcggaaatccggagcaaatgaggagtggtccctgagaagtcagtggcc
taaatgttgtggctgctgaagcaaaagaagaggaggctgttcgagtagccggccaagagcgccgcgggtt
cccaggcagcttctcattcccctgtccctcccatcccgtctcttgttaacagaaaaactgctttcacttt
gagatatgagtggcccgatacagccagctgtgagagctgtactcccttccctgccccacgtgttttctct
tctcaggcgacccctccctgagctgctggcagtgagtctgttctaagctccagtgagggaggcatccgcc
cacttggggcttctgtccaaggtaaggagcacctgtgagtctaactgccaggctctgatgggggtctcgt
ctctgtgggactagaaagtgtcccaacaatctgaccaaggtaacaggaagttaagacaaagacagagacc
aaagtcagaatcagagctgtgctgtgagacaaaaagataaaaaaaataaaatgctggccacaaaagtcag
gaaaactagaaaacttagatagtacctggcaacaaaagaaagcttttggctaaagatcaacgtgtatact
gtaaagaaaatgagcactgggtgagagactgccccaacaaaaagaagaggagcccccctcatgaccaaac
ccttcacctgttcgtggctaaaagtaaagagataacaaaaggggtgctaacacagaagctgagtccttaa
aagagtccggtggcctacctgttgaagcagctaaaaaagagactgtgtttcatactcctccactgaccag
tgcaaaacaagctaaaaagttcctgggcactgcgggcttttgcagattgtggattccaggttttgctgag
ttaaagagataaacagcccttcgtatagaaaaataaaaaacaaccttggatgtccttggatgctattgag
actgccctaatgttgtccccagctatgggactcctagatgtgactgagaacaaaggtattgccaaagaag
ttcttactcagagattgggaccctgaaaaagacctgtggcatacttgtaagaaattagacctggtggctg
taagatggcctgcttgtctgcacatagtggcttctggtcaaggacgcagataaattgactctgagacaaa
acttggcacatgtcctagaaagtgtggttcagcccccatgaccgatggctgactaacgctcttgaaaaca
ttatccaactgttcccctgaccgatggacacattgtcagagctttttttgactgaacgagtgaccttcgc
tccccctgctatcctcgatctcactactgcctgagacttcacctactcatcattgtgctgacattctggc
agaagaaactcatactcgaaatgatctgaaggatcagatcagccttggcctgagagtttgagctggtaca
cggatggcagtagcctggaggttaagggtaagcggaaggcggggacagcagtgcagtggtggacagaaag
caagtgatctaggccagcagcctccctaaagggacttcagcccacaaagccaaacttgtggctttaatac
aagctctgtaaatggtaaaaaaaaaaaagtctacacggacagcaggtatgctcttgccactgtacagagc
aatatacagacaaagagaactgttgacatctgcagagaaagacctaagatgctgtggctaaaagaaatca
gatggcaaatctaaccgcccaggcatcctaaagagcaatgatcctgacagtctgaagactatcaagttat
agacaaattaagactggtaaaaaaaaccctgtataaaatagtaaaaactgaaaaaagaaaactagtcctc
tcatgagaagacagacctgacatctactgaaaaatagactttactggaaaaaatatgtgtatgaatacct
tctagtttttgtgaacgttctcaagatggataaaagcttttccttgtaaaacgagactgatcagatagtc
atcaagaagattgttaaagaaaattttccaaggttcggagtgccaaaagcaatagtgtcagataatggtc
ctgcctttgttgcccaggtaagtcagggtgtggccaagtatttagaggtcaaatgaaaattccattgtgt
gtacagacctcagagctcaggaaagataaaaaagaataaataaaactctaaacagaccttgacaaaatta
atcctagagactggcacagacttacttggtactccttccccttgccctatttagaactgagaatactccc
tcttgattcggttttactctttttaagatcctttatggggctcctatgccatcactgtcttaaatgatgt
gtttaaacctatgttgttataataatgatctatatgttaagttaaaaggcttgcaggtggtgcagaaaga
agtctggtcacaactggctacagtgaacaagctgggtaccccaaggacatcttaccagttccagccagag
atctgatctacgtacacctgcgtcatgctgagaccctcaagcctcactaaaagggtccctgcctagttct
gtttactaatctgccttattctgtttttgttcccatgttaaagatagagtaaatgcagtattctccacat
agagatatagacttctgaaattctaagattagaattatttacaagaagaagtggggaa
>MMETN   Internal sequence of retrovirus-like sequence.
[encoded data, 4970 characters]
gaga
>ETNERV   Internal sequence of endogenous retrovirus.
ttttggcgccggaactgggacctgaagaatggcagagagatgctaagaggaacgctgctgtggagctcca
caggaaaggatcttcgtatcggacatcggagcaacggacaggtacacatgctagcgctagcttaaaattt
cagttttgtaaagtgttgctgaggatgcggtaggatacgaattaagcttgaatcagtgctaacccaacgc
tggttctgcttgggtcagcagcgtgttaatcggaactagaaacggaaacaggcaggttagccgcagcttt
ttaggaagctgcttaggtggaagaagaaagggtttaaagtcatggatcaggcggttgcccatagttttca
ggagttgtttcaggccagaggagtaaggcttgaagtacaattagtaaaaaattttttaggtaagatagat
agctgttgcccatggttcaaggaagaagaaacactagattgtggaacctgggagaaagttggtgaggcct
taaaaatcactcaggcagataattttaccctaggcctctgggcgctcgtaaatgatgcaataaaagatgc
cacttcccctgggctaagttgcccccaggcggagcttgtggtatctcaggaggagtgcctgtcagagagg
gcctcctcagaaaaagatcttcttaactcaaaaattgataaatgtggaaactcggatgaaaaactgattt
ttaacaaaaatcactcagatagaggagctgcccattaccttaatgagaattggtcctcttgtgaatctcc
cgctccacctgtagtccccacttcaggaggtgccacacatagggatacacgactaagcgagttagagttt
gagattaagcttcagaggctgactaatgagcttcgggaactaaaaaagatgtcagaagcggagaagagta
actcttctgtagttcaccaggtgccgctagaaaaggttgtgagtcaggctcgtgggaaaggacagaatat
gtctaatacgctagcctttcctgtggtcgaggcagttgatcagcaagatactagggccagacattaccag
accttagatttcaagttgataaaagagttaaaggcggctgttgtgcaatatggctcttcagccccattca
ctcaagcattactggacacagttgtggagtcacacttaacccctttagattgaaaagactctttctaagg
ctaccctgtcaggaggagattttttgctttgggattctgaatggcgagacgccagtaagaaaactgctgc
ttctaacgctcaggctggtaattcagactgggatagcaacatgcttttaggagagggtccatatgaggga
cagacaaatcagattgattttcctgttgcagtgtacgtgcaaattgcgacggccgcacgccgtgcttggg
gaaggttgccagtcaaaggagagattggtagaagtttagctagcattcggcagagttctgatgaaccata
tcaggattttgtggataggctattgatttcagctagtagaatccttggaagtccggacacgggaagtcct
ttcgttatgcaattggcttatgagaatgctaacgcaatttgccgagctgcgattcaaccgcataagggaa
cgacagatttggcgggatatgtccgcctttgcgcagacatcaggcctcccaccttgccttcaccttattt
gtcctaaatttcttgcacaccgatatcaagggccagtctgcagcggatcgccactggcatccagttactt
ctaattcttatgcattggtaaaatggaaggaccccctgactaatgaatggaagggtccaaatccagttct
aatttggggtaggggctcagtttgtgttttttcacgagatgaagatggagcgcggtggctgccagagaga
ttaattcgtcagatgaacacagattctgactcttctggtaagtatcattctaaagactaaaattcctttt
gtgcttagaattcagctgagagcgaaagctcccaaagctgttctccagctactctctgagccagctccca
acaggaggcccggagactagcctcagctttacaatttgcatttgaataaagtacctagacttccccgaaa
gaagttctgctttcctactttctcactgtcgagaatttgtcttacaagcaggtaaatcaacattctcgaa
gcggaccagcggatgtgcatccccgcccccctagagcacacaggtggctgctgttatctcctttccaagg
acatttccagcacgtggctttcagtctgagttaaaaattaggtttaccaagagggctagaagagtagata
tttctatattaataaagattggtttttattttgatagacaggcttagccccttagctgacctctggcttt
tcacccttgctgttactgcaaggtgtccttagctcaataaggctgtggaaaaaacagggatgaggaggaa
cgacttccagctcctattttagccacaaatcgtggtgttactaaggacataattcttgcttaggctttgc
taaatctgaggttgataattctcctttaggagcactcagaactgtgcatactggtttgtgatcgtacaaa
ttcagtatgggcatcgcttggtgcagaggcactgcaggggaaggtccagcttgaccatttctgagtttcc
tgtgagataaacccggtttgaaagaggttggtaccaaattttggctaaaaatgaaaaatagttttcggct
ctgcctcacctccccaaaaggtacccagagccacaggtgtgggtcttaacagtacccacgggaagaatcg
ggtcaatgtccacccaagccaaggttaaaagcccactcatcaacggatgagaaaatcatttgatcacctc
agttaagcgctgccttatttaacttaattaataggggggagagagattggagacgtactattgaaagggc
aagcccttcactgcctcccacccaaataaaaaagccaattggctttgtactacagagccggccgaacccc
ttctccctgtttcccacctatcatccaaaaatgcggaggtcaactagaaagttacctaccaagtactaat
tagcatcttaaagtcagagcctgcagctccaggcctttcagttagttgtttactaagaaaggacagtctt
aagccagatacagtttaccataagaaaagttaaagaatcccagtgaagcaggttttttctttagccctag
attccaggcagaactattgagcatagataattcccccccccccctcaggccagctttttcttttttttta
gttttgttaataaaagagaggaaa
>MYS1_LTR   Mouse mys-1 transposon long terminal repeat.
tgctgtggatatcactctatgtaaataaaacactgatggccaatgaccaggcaggaggtaggtgggacaa
ggagagaggagaattctgggaagcgggaggctgaggaagagagactgcagccaccgccaggagaagagca
tgtagagacgccggtaagccaccagccacgtggcaagctatagatttataaaaatgggttaatttaagat
aaaagaacagttagcaagaagcctgccacggccatacagtttataagtgatataagcgtctgagtgatta
ttttataaatggattgtgggactgcggggcttggggaacctggagagaagccctccagcaaca
>MYSERV   Internal sequence of retrovirus-like sequence.
[encoded data, 6603 characters]
ctgtwagagaaagaaccttatttgaacaaaaagggggaga
>RMER1A   Medium reiteration frequency repeat - a consensus.
tgstcccaccacctggggcagncggaagagntggccccggggttatgagagtaggagagctgtcgccgcc
cctcgccagctgtagcactcaggagaknagccctgcacctcccctgggcagcacagtagatctggccctg
gtacagggggcgcagatgaaccggcccggaggacgtgagctcaggagagctggccctgcnactcgtctgc
atgaggtggcatgaggtgcggngtgatgccctcctanntcctctcccaccactcgccacctgcggcagcg
gggagagctggccccaaggtcatgagagcwggagagctggccctgcccctcactggctgcagcacttggg
agagcaggccctgcacctcgcctgggcaacacagtggagctggccctgntggcgwrggcatgggtgagcc
agccccgagggtgtgagagcgggagagccggccccgccccttgmcgatggcggcnttgggtggcctagcc
agagcagtgctggagagctcgccctggtggtgcagataagggaaagccggcaggctgaccagctcagcta
ccacccaggcccagatccagggctttgagttggcccaccccaaaatctacaccatctgcgaactgctgga
gtacgtgaaggggccagtcctgctgatccaaagctgcaggatctccatgacacagggcaacaacaggata
accaagaggagtcccggtgaggatccagtattgatggtgtcacagaagccagaggcctcgaaccagacca
atgactcattgcaatgaacatttgcaagtaaagatgtgtggacaaaagggtatactttgggacacactgt
gacacactacagcttccactataagatgtttcatgtactgttttgtttatgttgtttgttttttggtttg
tgtatgcgttattttgtggtggaggttgcaagggtagagggcagatatgaggggatggggagatgagtgg
gattggggtacatggtgtaaaactcacaaagaatcaataaaaagttttaaaaaaaaa
>RMER1B   Medium reiteration frequency repeat - a consensus.
gcgggcagangtcacccaggggccctccagccacatggcccgcccgcagcgggagccactacgatgagca
agtatgtggtggagagatgggagagaaagagaagcagagcggtttgagcactatgaagagaggcggaact
ggagacgtgagggcagtgaggaacagcctgatgtgagtagcctaccctgccacctgaggccatggtgatg
tcccagcctgtgctgccactcggggccgcgtctgggtccatggctacacmgcagcaggggtctgtgtcga
tgtctgtggctcatrttaccactaaaggccatgcggatgtccctggtctgggctgccacctgaagccgtg
ttgatgtccatgagagcwggagagctggccctgcccctcactggctgcagcactttggagagcaggccct
gcacctcgcctgggcagcacagtagagctggccctgntggcgwrggcatgggtgagccagccccgagggt
gtgagagcgggagagccggccccgccccttgmcgatggcggcnttgggtggcctagccagagcagtgctg
gagagctcgccctggtggtgcgggcgcaggagagccggcgggctgaccagctcagctaccacccaggccc
agatccagggctttgagttggcccaccccaacatctaccccatctgcgaactgctggagtacgtgaaggg
gccagtcctgcagatccaaagctgcaggatctccatgacacagggcaacaacaggatatccaagaggagt
cccggtgaggatccagtattgatagtgtagcagaagccagaggcctcgaaccagaccaatgactcattgc
aatgaacatttgcaagtaaagatgtgtggacaaaagggtatactgtgggagacaccacagcttccacggc
gagatttgttttttctttatttttatttttatttttttttgtgagggaggttgcaagggtggagggcaga
tatgaggggatggggagatgagtgggattggggtacatggtgtaaaactcacaaagaatcaataaaaagt
tttaaaaaaaaa
>RMER6A   Long terminal repeat of retrovirus-like element.
tgtaaawgtawcttttattctcctgatgtaattgtcgtctccgaggcttactgcctctgtctgctaacct
aggcctagtcctggaagcttctagcctccgtacaatctwatctaggcctagaatgttttcagcctctgag
acttgctgctgaataagctcaccctttctagttctttctgaactctggctggctggttcaactcagctgt
tctggctcaaactcctctccaagctgactgattcaatctggcttctctcagcttctcactgaattgctct
gcttggcctcaaactaactctggcaatctgttctaatcttctggctccttctcattctctggcttgttct
gtcttcacctgtgtctagctcgttctctcttcagcctgtctctgtaaaactctcccggtaaaactgcctc
cttctcccctctgtgctgttccactgtccctnnnnnnnnngtactgtctgtctcttctctaagtagcttc
cctttcctctctcttcttctgagagttgggcatatcctgttctgtcaaatctttctctgattcgtcactt
tgtctgccactcaattagacatcactttcaaacatgggtgcttccttctacaaactaactttaccttcat
tgtttgggattaaaggtgtgtactaagggtgtgtctgtattccagccagagggattaaaggtgtgtgcta
agggctgagccacaccacaactagaaacaggtttttcagtaaataacacaatctcagggttcacagtgtg
atcaaatatcctgcaaca
>RMER6B   Long terminal repeat of retrovirus-like element.
ctaacaaaatctcaatcgtttgattttaccaataaagnctcaggagccagatgctggggtgaaagcctgc
tagctcagagaggcagagaaagcacccagctgaccttcctcctcagccsacatcccaaaaggagttctcc
ttctccacaccatctcaaaaccccttcaaactgaatgtccctcccttctacttcctgtgtgtctctctat
ccgtcctcctgactccctcttactctctgctttttttttcttatgttcactccctgtcaactggttgctt
gytctgcctcttgacctatggttgactttatttaatcctgtttacaataaacagaaagctcttggattaa
aggtgtgtgctggggctgagccacaccacgactagaaacaggtttttcagtaattaacacaatttcaggg
ttcacgatgtgatcaaataccctgcaaca
>RMER10A   Long terminal repeat of retrovirus-like element.
tgtttggtttcgaaccccggacaaggggctgaggtgcatattttacatatcaaagcagacctggcctcca
ggttctcccagcatccctcagtccctacctggcataccccgcccccaaccctgaactttccagcccaggg
gctgggctgcccttcccccagaggctcttccctatataatccagacattttggtctccccgttctctctc
tgcacatgggcactttctcttccctcctccctcctaccccgtccccatggcgacttccctggcctcggtc
cttggggccagtgaactcacccgagagcagyttcccaataaacctgccttcaatataatctaatctggct
tgaattggctcatttcaccggcggagaaataatttatca
>RMER10B   Long terminal repeat of retrovirus-like element.
tgttaggtctcaaacccaggacaaanggctgaggtgcctatttaacatatcaaagcggacctggcckcca
ggttctcccagcatccctcagtccctacctgttacagggtatggctggcataccccaccctctaccctaa
acttctccagcccaggggctgggctgcccttcccccagctgctcttycctatataatccagccattttgg
ctacctgctccttttgtncctttggcctcctggctgctgtacctggttctgctctctcccctcttccttc
tcctccctnctctcncccacwtggctcagggtcatgtccactctggactttcccagatgtctctatgtct
ntggctatgttctcccytttatctacaataaactttctcctccaccatacctaggagnagccatgtcctt
ccattttattttttttttcattca
>RMER12   Interspersed repeat.
tgccaagggcctgccccggctggaatgggctgaagcgggacacagmattggatgacgacttaaagactga
tggtccctggccttntagctctctccaactgtatttggkgctagawgctgctggcttctggaaaatctta
acwctctcttgcttattctgwggctaaaaactgmtggctttctttattctataactctntgctttataag
cattataaccctttttactttctttaactctctgtgctttaataagcactgggaacttaactctttctta
ctgttctgtgcttaaataagcgctaaaaacgtaactatgcttaaataagcgctggcctcttccgctgtac
cttcttattatttgtggttaacttggtgctaatntctggtgattaacacatgctgtntagcagcagggga
ttaagtgaaaggatttattgctagtgctcttttctctggtgagtcagccagaagcctctctggctaagct
ggttaactccttgtgaaacagagaggaaggaaagaagaagacttaagatacnnnnnnnnnnnnngaagat
acaataacagctacaggctacactttatttcttttctctggtcttttatagcttcttagacaaaaagttc
tttagaaaattacctcatagataaaatgttacacagaaggggagctacagaaggatgttgatagtaagtt
caaagcagtgtttcattctataagctcattataagttcaaagcaacattttcacatggccttgcttmatc
atagtgcacacctgtggcttyatccttggacctgacctagaatgaatgtttttccttgancataaatttg
tcccaagcctatttctctttttagtgcaattatgaaagctcattgtattccttwttatgcagcttttact
tactattctatgaggagtgggcacattctattcttgattctaactttattacatctttctggcaaaacaa
ctaaaaccatctccttaaactttcttcctaaaattatttgaatcaaatcaggaattctataaaatcatta
attcatctaaacagcattaattcatgaaagttcatcttcatgttgatctgcaggaaatctgcccaatagg
gtgggctgatgcccaggaatcattaggctatgtaatagtggcaggaaaggcatatcagcagcaagaagca
atcctgggatgaagtctcttggggccttgcctctcagagctcacccatcgcagccatgcaaaatggtggg
ccatctccaggaaactcacttgcttgccwtagcctttcctagatggcttctgtca
>RMER13A   Long terminal repeat of retrovirus-like element.
tgcttctgggatgtgggaactcagctgggaagacaggatgtngaacactagactgcacttatcctatgct
gctgtcaggtgctaggcttgagcgaagccccaatacactgctcaggaggtgggaaawtgtagtctaagat
ttgggaggctaaagctgggattccctgactcccgggcgtccagttaccgctggaaaccgcacagaggagt
cgaaatggagggwmgtgggtccccggggcctgcatgaggagcccgtgggccccacgggggctcccaaact
cctgtacgtccngtcggcactgtgtctcggggagttaggaatagaattgggggtcctctggctgagggtg
acggtgagcccggaaagctcatagaggagtgtgcttggcttggcggcggccgcsgctkggagtgcagaga
ggccttctgcaggagacttaggctgtggctctgtagwcgaaggccttctccgtgctccccackgcggttc
ttgatgaaagagacagtccttggttccaaactgtttattgattgttcatcgtggaaaatggatgcatacc
acctyctcagggtggaccagagattaaataccttttgcagggaggaatgtctgggaagggaagcttattg
gctaaaccctcagggcctctaggtacctcattagcatggagaactctgttctgggctacgtgaccacagg
tcatggttcctatgtgggaagtgtggcatgtgtcccgggacagggacctggymgggagcaggtgargcgc
ctaccatcctcagmtaggttcctgggtncccgggtctcngamcctgctcanccttaccaagtttcctggc
aykgtccactgtcccaca
>RMER13B   Long terminal repeat of retrovirus-like element.
tgtagaattaattgtggggctccctgaatcagctccaccacagcgttctggaggcaggggaggcaggatg
taggaggtttgactgcacttaccccatgctgttgctgggtgggtgtcaggctgtagcgaagccccgagac
actgctccaggaggtggggaagcacagtctgagatccaganacagccagagctgactcaccgtccctgga
cctgcaaagaggccgggaccagctggttctcaggcctttggacacccgggaaccactaggatgcagagga
agagctgagaatggagtggggggctgtggaagtggatctagcccagggctgagggggaaagagagggmgc
tnmagctggtcccgcgggagtagtccttggctggtcagcggcggtgkgcttggcttggcggcggccgcgg
ctkggagcacagagaggccttctgcaggagattagacggtggctctgtaggcgaaggccttctccgtgac
tccccatggcgggtcctgatgaaaagagacagtccatggtttcaaggcgtttattgtcatggcggaaagt
ggatgagtaaaaccntaccccacttctcagggtggacctgagattaaataccttttgcagggaggagtgt
ctgggaagggaagcttattggctaaaccctccaggcctttaggtacctcattawaatggagatctgtctt
gagcctatgtgaccacaggtcatgtcctctatntgtgaaggggcttkgggcgttgcccttatgtgactga
tggccacaaatctatgggggcctatgggttagtgaccaccctggtttcctgggagtcaggtgaaacttca
gggtctccaggattcaagcctccgcaactgggaaccagtatgtctttcactgtcccaca
>RMER15   RMER15 interspersed repeat - a consensus.
gtgttgtgtgacagtacttttcctggggagacatgaacaaacgtctactcaccccagatagggaaccaac
gacagaccaaagtamggataccacccaagtccagcttggtgaaccaatgagtttwattggggttacttac
aggaatatgggtgaggggttacttacaggagcagaaatgactcaaagacagctgccwcaccaaagcccac
cccagcatgggtgacagctcacaaaagctgggaacctggagcacactgcacarcctgcaggcagctcaac
aggttggagagtgtcctttccaggcgcctcagctggtctragcctcttccaggcagctcggctggtctct
gcttcttccgggcagctmggcttgtctgagagtgactctcagcagtctttactgyttatatackcttggg
gagggaggggcctagtgaatctggtcagtttcagggacttcctgaagctattttgagttgtttacttcct
gatcttaacgagcttccctgcaggatggaatgtttcaccttctcgntagaacttcctakgtcctaaggag
acttcc
>RMER16   Long terminal repeat of retrovirus-like element.
tgttgagggcttttggtgccgcttctaggaatttggcaggaattcgtcattgggccaggacacggaagta
ggctcaggcaggaatatgactttgggctaggacaaggaagtaggctcagatatcttggtcatcctgataa
gcccttagaaacagtgatcacgggacttttattgccttgcttgttccttgactgtttgtgtttattgcac
tgctttaccttattatttgcatgtacctaaaatgatataaaagcagactggggagaaataaacctgcctc
agcctcagaactggctggggtcatgctacartgttgtctaattntccttttttcttttcaatcctcactc
ctgccctggagaacctgttgactgactgagctggcttggtca
>RMER17A   Long terminal repeat of retrovirus-like element.
tgtggggaattgcaggctggtntccagttgagctgaggtctgaaccccagtggtgataattcacctacat
gacacggtaggcattccctcatgctcctggaactctggctcctgcctaagttaccgccccccacagcccc
cacaagagaagcatggttagtagtcacgcaggcaatgtcccaagcttctgaccttcaggctagactcctc
cccagttacctagcaacwgtaaagaccataagaggggctgctcggcccctcctcgctctcttacttgtct
cttctcttactcctttgttctcttaactctcacacttctttctcctcttccctttctctttgtcttctct
cctctctcctttctctctactcttctctcagccttctctctctctctccctctccctccctctctcctct
cttatacccctgcctttctacaataaagctctaaaaccatagagagtctctgctcatcaagatctgctgg
gctcactctcgtcagtgttgggaacctcttcccccatccttctctcccataaccctggtggctttagsaa
agtagctctggggcccccaggtagggctgccccttggccaccccccgaagagtgggtcagaggcttagat
gcccacccagggatgagtggaaggtagatagcagccctcccacnnctgactgaccagagaacaggtggaa
ctctggcggggtgtgggtcttccccttccccctcttccccagggccccccaccyytttttgctcccaaca

>RMER17B   Long terminal repeat of retrovirus-like element.
cagggtctgtgggactgtgawaggcagcctattttggttgaatggggcttgctctggcgacccagtagag
aactctacaagggatggaaaaatgagccaccttccagaatcaagtacctgaaatcacagagnncccagct
ccataattctgtgactatcagtcacgcagacaatgtcccaagcttctggcattctggctagactccaccc
ccacagccacctgactatagccaggtatgctcctccccacagttacctggcaacagcaagatagcccagc
ccactataagaggggctgcttggcccctcctcgctctttttaagctctcgcctttcttactctcmtctct
agccctccttctctctctcccctcccccctctctccacgtggccatggccggctctctctctttctacct
tctctcctttctccctgcctttctacaataaagctctaaaaccatagactgtctctgwtcatsaaggccc
gccgtgcttgaacwgtsatgggataggctttctcctaatgagccgcatctaacctcccgccagaaggcct
tcctgcgctccagctacggaccagaccaaggactctcscccgagtgggaaccacccagcgccctctcccc
cagccctctcctcctttcatccctggggccaagtgccaccccgggcccctattctgttctctgttccttt
gctgtatccagcctgggatgtcggaggccgagaatctggtacctggggctgccccttgtctaccacccgc
tgtgtggggttagtggcttcctacagcagacacccaccgggggccgtgtggaaagcgtgaacagtcctcc
tccgaccaccctcccagagcactggaactctggcgggacgcgggctctctcccatccccctctttcccca
acakccacggcccwgcaa
>RMER17C   Long terminal repeat of retrovirus-like element.
tgttagcattctgtctaggctctgccccacagttacctggcaacagccaggtgtgcctgactcactataa
aaggggctgtttggcccctcctcgctctcttgctctcgtctctcttcctctcctctctagccctccttcc
ctctctccccccccctctctctccacgtgctcacgggcggcctcttctctctctctctgacactctgtct
ctctctgcctttctayyyyyyyyyyyyyactcccctccccatgccctgaataaactctattctatactat
actgtcgtgtggtggctggtacctcagggggaagggatgcctcagcatgggcccgcmgaggcacccctcc
cmccwcaccwtaccacgcctccacmaaacatatccttctctctttatttttataaaacacaaca
>RMER19   Long terminal repeat of retrovirus-like element.
tgtaggcttagatttttcgaaacctanttttaataagggttcttaaacgcttcaacctctcttctagccc
accacccaccagaggtagtggaagagaaaggttattaggatatgggggwagtggacctgcttagcaatag
ttctttaggggtgagcccaatcttcattgkcagcagttcagtcccgtagcaaacaccaaatatgactcag
cagctgcagatcagtcctctaggcaggcagacaccaggcacgaaccagcagctgcagtccagtcctctcg
gcaagcatgaactagcagttgcagttcgatccwgaagaaaccgcaaggctctgccaattggcstaagtcc
gcggaagcagcaaagaagctgcaggaacmtcacaagcagttctttggcgagtttctctctatgcggtagc
gtcaccgcaagtkgagcccaacaacgctatgcaaggcgaaccaatacatgggtgtcgttagcaaagaata
gcgaggcagagcaaaccaaagctcagtgctcgtctcccactgtctgtggggtcatatttatactccttcc
aaacatcawgcgtcctttcacgtgtctgctmtaacmaaacatcctytcacctgtgtctgcttcaggaaaa
cagtctttcacgtgtttgcttcagcaagacatcctttcacctgtgtgccccggcaaaacatcatttgaca
taactgastttccaaagaaacyagaartttccacttca
>RMER20   RMER20 interspersed repeat - a consensus.
tgttgggaaaccctgctacttaaggtcgmagwctaccatgtccagatagctcctctgagctcggtgcaaa
atggaggactccctttwccagcagggcttccccttctctgmccttgtctggggagcccgacctccacacc
ctctacctgaggaaggtcacgtagctgttggcaaacctacaggttcaacttcctctctcctgataagaac
ccgyccagcaagtacctgggattcctggaatgcctctccatgcaaatgaggcattcccagtaccttaaac
tccagccaatgatktacattcaccctgaaaactccttcccactctccaaggttcatatatagcccttgtc
cacctgaataagtgtatgcgcacaa
>SATMIN   Mouse minor satellite DNA (a consensus).
cggcattgtagaacagtgtatatcaatgagttacaatgagaaacatggaaaatgataaaaaccacactgt
agaacatattagatgagtgagttacactgaaaaacacattcgttggaaacgggatttgtagaacagtgta
tatcaatgagttacaatgaaaaacatggaaaatgataaaaaccacactgtagaacatattagatgagtga
gttacactgaaaaacacattcgttggaaacgggatttgtagaacagtgtatatcaatgagttacaatgag
aaacatggaaaatgataaaaaccacactgtagaacatattagatgagtgagttacactgaaaaacacata
cgttggaaaccg
>YREP   Mus musculus Y chromosome repetitive DNA sequence.
gaattctatggatatccagatttcaatagttttcacttcaaaaaatatagttaaaaaattccaaatgtac
atttattttcgtatttctggtcaacattttcctactgaagtgacagaaatatttactatttttatatctt
tatactaacattatatttctgtttaatttgtaggggacaggtttatttgagacagtcctacattactcat
gctgaactcatactcactatgtagctatggacagtcaaaggacttgatcctcctgcattcaactgccaag
tgctgggattacagattacaggaccatagctattaaaagattttcaatgactgataaaagaggtgaggat
ttgactttaggatttcggtatttttctaattgtagtcatagtttatattgaatagtcattaggtgaaagg
taacagagattctggtctttcagatttctactcattagtaggttagttaatacatttaaatatctgctaa
aaatgtcatggcatacaggagaacagtagtttaagatcttgcctagggtggtttcttatgtttaaaagat
tcagtaaataggagtagatttatgagtttaacatgaatgagcatgtcttatctaatttgccaatgttata
cataatactacaaaacataaattttaagtttttagaattattttcctcaaaacatatatatttttgacca
aatgagctagaattactcataacaaatatttaatattataaaaagcctaaatttttgttgaaataaaatg
aaacttgttctgttgaatttattgtagtctgttattttgataagtatttctgaggtttttagagatctaa
agacaaaatattcagtgtatttttttatgataatttccaagtaagttagtatactgagactaggctggta
agccaatgcccacactacaaagaggttctagcttttggtctgtaaatgactacaatgttttttgccatgc
tatgaaaggtttaaaaattgccttcatttggagtatttatttaatttttatctgtagtccctatctcttt
cctgaactgactcataatggcaggaccctccatgtatttcgcaggcagaaaatgatctcctgttcatttc
aaattgaatagcccccaaacaattaaccaaccaaattaaaaaaaaattgttaatatggtaattgcctcag
atcttacttggaaaccatttgatgactacagtgattgttatattaatggggaaatgatctaaaatagttt
ggtgatattcttccacaggagtattttgccagggttgttaggaaagttttttccatacactttttttttt
taataaatagggactaagtttaggattgtaaaaactaatttgctactttgagttggttttctaaaataaa
cgacagagtccagatgacaacagtaagtaatctttctctatctttcaagtatacctgaggctgacatatt
gtaaaagctggtaatcctctcttcatctctcagcaaatgtcggcctcttggaaatttatgatctcgtctc
cattaaaattcttagtggttttcattggtatagtatatgatcatacctctctgatttacaattcagtagg
actaaaacagaaccaaaaatagttagataatgagaattaatttagtttcatgtgtcaaacacaaggctgg
tttctcccttcctaattgatacataggtatacgaggttaattatgaagttatttattataccaaccactg
ttttttcttgttctttattgaatttctttttttttacctttaaaaatttttattattattat
>B2L_S   B2-like retroposon from Sciurognathi - a consensus.
ggggctggagagatggctcagyggttaaggcgcttgcytgcaaagcctgaaggcctgggttcgattcccc
agyacccacgtaagccagatgcacawagtggcacatgcatctggagttcgtttgcagtggcaggaagccc
tggtgtgcctatactctctcactctctctctgcctctctctctctcaaataaataaataaaatattaaaa
aaaataaaataaaataaacaggtaaataagaaggaractactga
>NICER_RN   Rat NICER element (GL5-14) 3' long terminal repeat.
ggaaaggaaaattatacagatttaaggtttaaaaatatgaagttaaaagagtatgtttcaactcaggact
aaacactgtgaaaagcaagtccagacagccccgccctgccgctagaactaacagaccataaaaggaaagg
aatgcagaacagaccaggagtaccggacctgactcacaggccacctggcaggaagagataagcccccagc
ccccgacatccaggacgccccaaagctgccaatgtgtgtagctataacttattacctcatcatgtgaaat
agccaatcatatgtgaacatgtctttgtgcctcgtttgaatccaccaatccccgtaactatgcatctgct
tctgtacgcccacttctgcttccccaatccctataaaatccccatgctggagctgctgggtgcgcaagtc
ctccgaagagtctgtgtgcccgcaggtacctgtgttttccaataaaccctcttgctgatggcatcgcagt
ggactcggctcggtcattggggcttggactcctcctgagggaaggtcctctccgggggtctttca
>CHESHIRE_A   Nonautonomous DNA transposon; HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtaaataaagttttat
tggaacacagccacgcccattcgtttatatattgtctatggctgcttttgcgctacaacggcagagttga
gtagttgcgacagagaccgtatggcccgcaaagcctaaaatatttactatctggccctttacagaaaaag
tttgccgacccctg
>CHESHIRE_B   Nonautonomous DNA transposon; HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtactgcccgtaaact
aagaatggtttttacatttttaaatggttggaagaaaaatcaaaagaagartattttgtgacatgtgaaa
attatatgaaattcaaatttcagtgtccataaataaagttttattggaacacagccacgcccattcgttt
atatattgtctatggctgcttttgcgctacaacggcagagttgagtagttgcgacagagaccgtatggcc
cgcaaagcctaaaatatttactatctggccctttacagaaaaagtttgccgacccctg
>CHARLIE1   Autonomous DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgacatcatcgctctgatggctaatggaatgtgtgctt
gtgtattcttgtgttttctaaaatttttaaggtagtaggtttagggtataaatatgtaggttttcagaga
ttaactcagtttsttcttagcacttctaccgtgctcttactagctatcttcagttatacctgctataatc
tttgtaacctcattatcgtccaataaatcattattttraaatcctaaagttttcctcgwgcctatgtgaa
aacacaagaagcaagtactacttgtaaaacttgcttgcaataacattttgaaaatttcccaaatgtttaa
attttatcgacaacatatagaatttaatattttattctaaaataaaaatttatttataawgtttttccta
tatttaagggtggattgttggcttaaaaaagggagattagaagactcgctttctcaacccacagctgcam
catctatgtctaaagatgctgaaatggacataccagcaagttctctgattcctcatggaarggaggaatc
tactccaaagaaactgggcgaaactgtaaataaaaaacaaaaatatgataaaagctatcttctcagcttt
atagatgttaataatttaccttattgtgtcttatgcaacagaacattttcgaatagtattatggtgccag
ttaagttgcggcatcattttgagaccaatcattcagagtttaaagaaaaaggaattaaatattttaaacg
tagatgtgatgagctctttaaaagccaaaaattgtttgttgcagcttttcaaactagaaatgaaaaagcc
actgaagcatcttacaggataagttgccayattgcattggctggagaagcmcacacaataactgagagac
taataaagcctcgaacagttgacattgctgaatgcctgctggatgaaaagtcagtaaaagaaatcatagc
actgccactttccaatgatacgataactcgtcaaattaaagatttagctgcaaacatgaagaccgagtta
atatntcatctgcagaattgtacttttgccttacaaatggacgaatctacagatgtkgctagacttgctg
tgttgcttgcgttcgtctggtatcagcaccaactgatcatcgaagaacttcttttatgtgaattcttggc
aacaaacacaagtggtgatgaaatattcaaagtgttgaatgacttttttgaatctcatgatttatcctgg
aacaactgtgttgacatttgcactgatggtgcaaaagcaatggtgggtaaaactgctggcgccttagcac
gaatcaaggcagtggcaccaaactgtactagtagtcattgtattcttcaccgccacgcactcgcagtwaa
aaaaatgccagtttcacttaagaatgtccttgatgaagcagtaaaaattattaattttattaaatctcaa
cccttgagtacacgtctttttaatattctgtgtgacaaaatgggaagtacgcataaagcacttctgctgc
ataccgaagtacgatggttgtctcgaggaaaagcacttgtgcgattgtttgagttgcgagctgaactagc
tgcttttttcatggaacaccatttttacttgaaagaacgactgacagacaaactatggttattcagactt
gggtatttggcagacattttctcgaaaatgaacgaagtgagcctgtcacttcaaggaaaacaactgacag
tatttgttgccaatgataaaattcgagctttcaagcgaaaattagaattttggaaaacttgtatccgcca
ccgtgagcttgacagcttcccaatacttaaagacttttctgatgagatcggtggtgatattaacgaatgt
gattttttgatattgtataatgaaatgtgtcaacatttggaagatctgcataactcagtgaaccaatatt
ttccaaatgaccaatgcatgatgttacaaaatcatgcatgggtaaaagatccattcaaagtgcaagatag
accaatggattttaatgtaacagagtatgaaaagttcattgatatggtttcagattccacattgcaacta
acctttaagaaactaccacttgtcgagttttggtgtagtatcaaagaagaatatccacaattatctgaaa
aggctattaaaatactcctcccttttccaactacatatctgtgtgaggccagattttcttcatatacttc
aaccaaaacaacatatcgcaacagattgaatgcagaagcagatatgagaatccagctgtcttctattaag
ccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcactaaatttttttgttttgga
aaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggtttattattttwaaatgaat
waataaatattttaaaaatttctcagttttaatttctaatacggtaaatatcgatagatataacccacat
aaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtcctgagaccaaaaagtttga
gaaccgctg
>CHARLIE1A   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactgtgttgacatttgcactgatgg
tgcaaaagcaatggtgggtaaaactgctggcgccttagcacggatcaaggcagtggcaccaaactgtact
agtagtcattgtattcttcaccgccacgcgctcgcagtnaaaaaaatgccagtttcacttaagaatgtcc
ttgatgaagcagtaaaaatkattaattttattaaatctcgacccttgagyacacgtctttttaatattct
gtgtgacaaaatgggaagtacgcataaagcacttctgctgcataccgaagtacgatggytgtctcgagga
aaagcacttgtgcgattgtttgagttgcgagctgaactagctacttttttcatggaacaccatttttact
tgaaagaacgactgacagacaaactrtggttattcagacttgggtatttggcagacattttctcaaaaat
gaacgaagtgagcctgtcacttcaaggaaaacaactgacggtatttgttgccaatgataaaattcgagct
ttcaagcgaaaattagaattttggaaaacttgtatctgccaccgtgagcttgacagcttcccaatactta
aagacttttctgatgagatcggtggtgatattaacgaatgtgattttttgatattgtataatgaaatgtg
tcaacatttggaagatctgcataactcagtgaaccartattttccaaatgaccaatgcatgatgttacaa
aatcatgcatgggtaaaagatccattcaaagcgcaagatagaccaatggattttaatgtaacagagtacg
aaaagttcattgatacggtttcagattccacaccgcaactaacctttaagaaactaccacttgttgagtt
ttggtgtagtatcaaagaagaatatccacaattatctgaaaaggctattaaaatactcctctcttttcca
actacatatctgtgtgaggccagattttcttcatatacttcaaccaaaacaacatatcgcaacagattga
atgcagaagcagatatgagaatccagctgtcttctattaagccagacattaaagagatttgcaaaaatgt
aaaacaatgccactcttctcactaaatttttttgttttggaaaatacggttatttttcataaaaatgtta
tttatgttaacatgtaatgggtttattattttwaaatgaatwaataaatattttaaaaatttctcagttt
taatttctaatacggtaaatatcaatagatataacccacataaacaaaagctctttggggtcctcaataa
tttttaagagtataaaggggtcctgagaccaaaaagtttgagaaccgctg
>CHARLIE1B   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgtcgcaacagattgaatgcagaagcagatatgagaat
ccagctgtcttctattaagccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcac
taaatttttttgttttggaaaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggt
ttattattttwaaatgaatwaataaatattttaaaaatttctcagttttaatttctaatacggtaaatat
cgatagatataacccacataaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtc
ctgagaccaaaaagtttgagaaccgctg
>CHARLIE2   DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacatgaagactttccaaggggtatgcgggca
cggatagttttaagggaatcaatttccagatcctcarcttccatatgtactctttcctaaaactgatctg
cctgagaacgcgcctgtggcgagggcctgccgnctttcccacttcccctttcacgatcgcccttctccca
ctttacaaaagaaaggcatacctctcacccatcccgaatcttactatggtgcattgccctggggtgtaaa
aacctccggggcaccaaacaaagggacaattcgaaatactggtgttggtgaagcctcctttaatcaaggc
accataarcccgnngtacagttttatgtcttccctggctttayaaatatttctgttaagggtaaagcatg
atgttggaacaaggtactttggcycatgttggggtgttctgaattcagatatatcntagagtggggtggt
gggagtgatgacgatttttncttgacgatgttgcttcttccatcnctattnacaaagaatacattgctcc
tgaggaagagtcctgagagcaaagcaaagagaacattgntaagaaatggcgaagatggcagtgcnttatt
tcatccaggtgacaaactcatggcgaggtctatctatctgakagttggaatattcaagatwtgkaaaagg
cattctgggaaataccaatcngctacgaagcatgcctcctctgcactttcaccattctcagtantgagaa
agagcttggtgagtactctcattcacctgcgtcttagtctgkgtctcagttgcatattttgcatgatttc
aaggmggtggaggcgaaaagctctgcaattacttctaacagatcaacattacattttcaagtaaaaggaa
catatattggaggtaagttmrtgtatkctattttcttgaacatttattcagattmataggagaaacattt
tcattaacttttgccaaagatttctagatagtgtaaatatatttttctatttaggcamaagtctcctgct
cactgtcactcatgaacmacttctctgttcatttattnattcctaccatatacttactagagttagatta
anttaacaggaatatgttgcagattctactgtaantaatgcacwtaatagcagtcagtaatataactttt
gtaaacccatanttattaatgatccaatancttctctctcnttttgctgwcgatttccacaaagtagatt
aaactgtactcttaaaagcagaacattcacttatgtacgagtgcaggacagaatgttccaaaatgcaats
tagaatgcgatgcccwgaacttcagaaaaccagcttcacttaattaggattaatttctcccgctcggang
ctaatatactgttttanttctgtcaaatgnatnattataagtaataatttttnacaataacgaaattant
antatatacatgaatannctcaagtgtccgtccctctgtcatatttttaaaatgcatttngagacgttct
taaaaaatgaaatwtggtattgtntataggtctctgttcgtagtcgakgagamaagtccccaaatncaca
atttacaatttttcgwtttttccaactccttccatgtatattgaggtccataagcaaggtgcctctaagt
gaaagagtagcaggnataattaatagtcatttgataagtcttggtgaagccttttgggtatacttcctag
aaactgagaaagtgaatgactctaatgactgggtaacaaatccttttgcaagtcaggtggtttccaattc
tttgctttcaacaaaattgaaggaggacctaatcgagttgtcagctgacagatcattaaaaataattttt
gatgatagatcaytatgtgatttttggcatataactcggaaggagttcaaagaattgagtgacattgcta
taacaaaactccttccattcccatctacttatttatgtgaacaagrtttctcagcgcttacatctataaa
aatgaaaaataggaatagaattgatgctgaactctgtctcattctagcaataagtaatattcatccacgg
atacatgaactaattggggaaacaaggccccatccatctcattaagagatgcatttccaataaaatttta
ctttttatgtttawtatttatcaaaatttgtaatatgtttatgttgttttgatcaattgtatattaataa
taattgtaatgataactcaatccagaagaaaawttttaacacttagagccttatggtcanarkaaatata
aaaaattaaatttcaatttatatacatatttttgttgcagagaagtatgatagggtgatcaataaaagac
tttcaagcataaaaatatattacattaggataaaattctgtgggggaagtggaatggaaatacgagttca
aggagaaaaagagaacaatgtaaaatttccgactgttaaagaagagcttgctcatgtattttttaaatgg
atgatggtgggtatcaaatcgctatggtatttagattccattggatacatttaaaagagtgatgtaacag
ttttattttaaaatgtcaatatttacaatatgccagaaattacatcctttgcaactatttaaacttatga
tgaaaaattttagatgtcaacttaaaaatgtgcgagggrgtacatagtttttcaaaattcttttagggga
tacgcaagcaaaaawgtttgaagaccactg
>GOLEM   Autonomous DNA transposon; POGO superfamily.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagtatg
ccgtgttagaccggcagcagccacatgcatctcgtgtttaccgcgtctcttgattgcatcattttctctt
gtgcttgatttaatctcatgtgttttgttcatcacggctcctaagcgttcaaaatccacggctaatgttg
ccagtaagaggccacgtcgagtaattgagctggaaacaaaattaaaagtgattaaggaccgccgaaggtg
gaaaatcagtgatggttattgctcgccagacaggtatgtcccattcgaccatagctgccaccttgaagaa
caagagcaaagtgacagaaactgttaaagggtctgcttcatcgaaggcgacgagaccaacaaatttgaga
agtgccaacatcagatatggagaatatctgctaatgacctggattgaaaaccagacacagaaacatagct
ctctcagcaccacgacgaccacggccagagcaaaagggatatttttgatgttgaaagaaaaggctggacc
cgactgtgatatcgaatttactgctagttccgggtggtttaaatgattcgagaatcgttatccattacat
aatgttaacgtgactgctgagtctgtgagggctgacgtgaaggcagctgaagagtttttggaaactctag
atgagtcgtggagaagaaatacttgccagagcaaatcttcaatatggaggaaacctccctattctggaaa
cagatgcctgaaaggactttctgtcataagggggccaagtcaatgccaggtttcaagggttttaaggaca
ggaaacggtcttgctttggggcaatgttgcaggctacaaattgaagccctttgtgatccgacacagtgaa
aaccccagggccttcaagcatatcagtaagcacacgctgccagtgtactacaggagcaataaaaagtcat
ggatgatccatctcctcttccaagatgccctcctgaattgctatgccagagaaatggagaagtactgttt
ggggaataacatacctttcaagattttgcttattgttgataatgctcctgcacatcttccttttactggt
gatcttcatcccaatttcaaagtggtgtttctctctccaaacaccacctctttgatccaatggatcaagg
aattatagcagctttttaaaggcctactaccagagaagggccttcgcccaggttatcactgtaactgagg
aagacactgatgcaattctggaaggattacaacagccaagactgcatcaagaaccttgcttgggattggg
gtgatgtcaccaaggagtgtatgaatggcatctggaagaagacactcaagaggtttgtccatgacttcaa
aggatttgccaaggatgaggaggttgcaaaaatcaacaaggctgtggttgagatggcaaacaactttaac
ctgggtgtggatgaggatgacattgaggagctcctagaggtggttcctgaggaattgactaatgaggagt
tgttggaactggaacaggaatgcatagctgaagaagaggcaagagaaaaggaaactgcaggagaagaaga
agaacccccaagaaaattcacagtaaagggtttagcagaagcttttgcagacctcaacaagctccttaaa
aagtttgaaaacatggaccccaacaccgaaaggttttcattaatagagaggaatgttcatggtgcattat
ctgcttacaagcaaatctatgatgacaaaaagaaacaaaccaagcaaaccatcatggacatatatttctg
aaaagagtgacacctcctcaagaagagcctcaggcaggtccttcaggagatattccagaagaargcatcg
ttatcataggagatgacagctccatgcatgttattgcccctgaagaccttccagtgggacaaaatgtgga
ggcggaagacagtgatattratgatcctgaccctgtgtaggcctaggctaatgtgtgtgtttgtgtctta
gtttttaacaaaaatnttttaaaaaataaaaaaatwaaaaatttwwaaatagaaaaaagcttatagaata
aggatataaagaaagaaaatatttttgtacagctgtacaatgtgtttgtgttttaagctaagtgttatta
caaaagagtcaaaagttaaaaatgcaaaagtttataaagtaaaaaagttacagtaagctatggttaattt
attgctgaaaaarwwwwwwwwwwwwwataaawttagtatagcctaagtgtacagtgtttataaagtctac
agtagtgtacagtaatgtcctaggccttcacattcactcaccactcactcactgactcacccagagcaac
ttccagtcctgcaagctccattcatggtaagtgcyctatacaggtgtaccattttttatcttttataccg
tatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattgcctacagta
ttcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatagcctaggtgt
gtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaattgcctaatg
acgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>GOLEM_B   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagnctc
aggcaggtccttcaggagatattccagaagaargcatcgttatcataggagatgacagctccatgcatgt
tattgcccctgaagaccttccagtgggacaaaatgtggaggcggaagacagtgatattratgatcctgac
cctgtgtaggcctaggctaatgtgtgtgtttgtgtcttagtttttaacaaaaatnttttaaaaaataaaa
aaatwaaaaatttwwaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtaca
gctgtacaatgtgtttgtgttttaagctaagtgttattacaaaagagtcaaaagttaaaaatgcaaaagt
ttataaagtaaaaaagttacagtaagctatggttaatttattgctgaaaaarwwwwwwwwwwwwwataaa
wttagtatagcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcac
attcactcaccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaag
tgcyctatacaggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagat
acacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttgt
agcctaggagcaataggctataccayatagcctaggtgtgtagtaggctataccatctaggtttgtgtaa
gtacactctatgatgttcgcacaacgaaattgcctaatgacgcatttctcagaacgtatccccgtcgtta
agcgacgcatgactg
>HAL1   HAL1 repetitive element - a consensus sequence.
ccctatagtgaagcccacmacctggcaagccccacccacgcactcagagcttccaagtcgctttttagts
tcccactcttaaatatgagcagacagccaaggatcaccagacatctgaggaaancctctaatatggcaga
caganaaataaaaacagagaaaaacawwntntatccatgaaacaagaayaggatgctataaaaaggaaca
ttcagagaacaaaaagaagctcttggaaattaaaaacgtgagagcagaaattaaaatttcaatagaaggg
ttggaagataaagttgaggaaatctcccagaaagtagaacaaacaaaggataaagatacggaaaatagga
gagaaaagaattaaaaaaattgaggatcagtccaggaggtccaacatccaactaatagaagttccagaaa
gagagaacagagaaaaagatggaagagaaattatcaaagaaataattcaagaaaatttcccagaactgaa
ggacatgaatttccagattgaaaggncccaccgagtgcttaccgcaaaaatgaaggaaaaaaatagaccc
acaccaaggcacatcattgtgaaatttcagaacactgaganaaaaggaaaatcccaaaagcttccagaga
gaaaaaaaggtcacatacaaaggatnagaatcagaatggcatyagacttctcaacagcaacactggaagc
tagaagacaatggagcaatgccttcaaaattctgagggaaaatgatttycaacctagaattctataccca
gccaaactatcaatcaagtgtgagggtagaataaagacattttcagacatgcaagatctcaaaaaattta
cctcccatgcaccctttctcaggaagctactggaggatgtgctccaccaaaacgagggagtaaaccaaga
aagaggaagacatgggatccaggaaacaggggatccaacacaggagagaggtaaagggaattcccaggat
gatggtgaagggaaattccaggatgacagctgtgcagcaggcctagagagcaaccagtccagattggagc
aggaagatggaaggctccaggaggaatgttctcaagaaaatagaanacaaatgaaactgatagattatct
gatgtgtttgaatatattgagaggntatnatttagwcatgtgaaagtttgggggagaattgaattagtga
taggtacanagaaaactaagcaaatgaaaaaaagcaagacaattattaactccagggaaaacaaaaagtt
gtacaagaaaggaaatgtaatcatagtacactacatggctcagctgtgaataacatatttacatagtcat
aataatgtaaacactraatactgatttaaccaaaattatgatataaactatattgggaggataagaaatg
gaaagggtgtgcgtatkgtgtangnggaatgaragaantaaatcctcatcttccatagtaggaagtcart
agataatgtctaaaactgaaaaatcaagaaatagcaatataagcatgttatttagaaatatggaggtaaa
tattccaaaagaatcagctaaaagagttgaaagtggttgcctctggggaaggagctgnaggtggtgaaga
gngnagggacggggaaytgctgttttttataagccttttagtactatttgaccttttaaactatatacat
rtattactttaatttaaaaaantaanttataaaaaagnaaataagta
>HERVFH21   HERVFH21I endogenous retrovirus flanked by LTR21s.
[encoded data, 6603 characters]
acctattaaaaggctggaa
>HERVH   Internal part of endogenous retrovirus RTVL-H (HERV-H family).
[encoded data, 7810 characters]
aagaaggcaggaa
>HERVL68   HERVL68 repetitive element - a consensus.
gcactrtntgggannnttnntggaanggaagaagagggaagatggatgacaaaattatgcctgggtvgct
atggagttattcatggtatraaayagcagctragctgctgtctgttatgagaggtaaaagttacctgtgr
aatttgaaaatgatagatccaatcacagagagttggcnysctggatcccytggctgcttttggccwtkct
ggctaaagtnaggaaraarcacancycarrtgatgtctttggtttttgttctytcctccarktgggagga
gaaagggcccaaacattccnaaangtgagcttnntwtgsaswaaagwyawwaacaktwnnttgnagttnt
cttctccaggtggnaggngnaangrtcngaaaantnctnnaggcnngnwttgagtgrrccaaraatgtta
aaagtttgcattgctctctcctccaagtggaagraaaaargttaaatcagttcccagggctggagyaang
ctttagataaaccagaggaggagaaaaagtaaaaaaaaagcccnccaaacaagwaaaccactctagccnt
ttctacagcttagctgctgcyacagcaactcaacnccctcctttcmctacaaccttcanctccagcanct
gtaatgttaaccytgtaaadtgctnaatttactgctaggggtttgantaaacatghaatgagtaaaaaga
aggaaatnattatwgaatsrctttgtattttgtggctattgcatctggatgtatgataaaaattratgta
aaatgttatatgcttgtaatttcataaatgctagaggaatcatcctaatmgggaaagctgcaaagaaaaa
aaagttagtggnawcacaactcccttgctttytgctgcyggtgggtggattggaatttaaactctttgag
tattggaaasagaacaagtctccataactgatgatttttgcctattggarcctctgnaaaaagggagaca
acatnaaaagagaggcaatctccagatggagatacacttttggagttttaaaaanyagtttttagtttgc
taatgwgctcttgytgaaatgagatgtctgacccttagaggctgatgattttcagcctgatgtgcatgat
ttttgagggggtcaatttggactctaaractgacaagataaaaaggmctyttagaaaagccttgcttgtc
acttggacttggaatacagctgtctggntcttcagtntctcagctttgctgctgctgaagaaaagccact
ggcttttttggaatcctgaattcacagatcctaattgcctgtacctgactctaagctgaaacctcatact
gtctgctgtgrgctgtttcagcctcgngntgagctgtgctgaactgaaatnngntgaaatggctcgactc
aatgaacagaactcagactctgggactgttgcagatttaggaccaccctctgtggggccataaactatga
aaacatcacggatgctggctggactgtctgggtcacatacagatgcccacaggaaagggcttgttctctg
atgggaccatctaaaattgagctgctgattggctctatatttctgatacagagactaattgcattcttaa
cttgtgatttctgtcgaaagctgcaagttgggggagggcacattacaagaagtgtgacccctccacccac
tcctgacagattggacttgaccccctctcggggatgtctcactgctattgacttgttgtgttcggctttc
tggattagttgcagtttgcaacaatggactgacagcctgagtctacttccctcacctttctcctggtaca
cacatcttagtgagacagtttgattattaaatgcagctgtccccagaaagggattgatcttttttttcct
aggctgctcaccggataaatgatcaggacgaaaagggtgggaaggttatgtaaactcattttgaaaaatt
ttgaaaattcagaattcatcctgaccaatttctgaacatgatgtgtctttccggttaagttgtataaaaa
tgtttttctataaaaatgtttttgtccctcttgcatacaacccttccagacaaaaggtctgggtgagagt
aagagatgattggagaaatatgaagttaagattgtaagttatgaatattgctgaatgggacacactgatt
ttgtaacaacggagaaaaaagaaaaacctatggaggcacggggtgtgagagagggcattaatgatctttg
tttttcagaactgctcctggaagctttcccctcttcctgaagaaaaattccccatgctgcctttccaagc
tgctgcgagcgctttgaattcaaactgactgctgagcctaagatcacacctgacagcgctgactatgaga
cagcagggggtggccccagctcctgcactttccacgaagaacacctccagatgtcatccacacacatgag
acggatgaactggtgtcatggacaagcaaaactgtttggaactgactgcctttaggcagtccctctgaaa
ccaaggactaaactgaattaattggactagactctttgggagtagtccccgtggtaagaggccacactgg
ggaccctgttaacctgtactgcctgactaatgtatgtcctgcttggggtaccctaacaattgtaaactct
ttgtttccaggggtaccacgtgtgccctctgggattgtacttttatgtgtaccctgactatcatgacact
gcctcagccctggaaggctttcaggtcagcttcaacttactggccagagttgtgctgtgcctgaattgat
gcctcaggccaraaaaaaaaaggttaatacagaaacttaaggaggaagccacctggctttctaagataga
cctttatggttaatgggatttgttttaactggctaaattcaggacccctaaagggcataaactgagatca
atactgcaggttggtctcaccctgctgcgtggggtcctactgataataattttgctgtaaagatgccttg
gccaagggggtggactgtgcagaagag
>HERVS71   Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 6106 characters]
gtaaccctggccacataccctggaggattgacctggtcctcaacacttt
>L1M3A_5   L1M3A_5 LINE1 repetitive element - a consensus.
gagtgawgtcagcaagatggcagaatwggaggtctcaggctccagtctccctcacagaaagtccgactag
caactattcacagacaagaacgcctttgtgaaaaatgccagaacttggaaatgagrctgagacanctncg
tggancacagaaacgaataaaaaccacattaaaagggtaagaggaaccgtctcactttaaccacgttgcc
cctmagtcggcacagtrccacacngagagaawttccccgggcctacagtttctacagtgggaaaagagag
ctkgaggtggacatccagcttccctagcattccaagatgcttcccaggargcccactcynatctcacctc
atgaggaaacactgagggaaatggcanggctagaccgtctggagtcaggtagaaacaaaaaaagggggca
nagctcatagtaaccagtgcacggatcttggtggtagctctgtattcctgccagcggtggcgcctgatca
gaggtaccagccaatggcatagcccacccgcaaagctgagctggtcgctcccagaagcacggtgagaagt
tcnacccggcttgagtccctagatggccagcctccaaacccagccttagascctaccccagngctccacc
caggcagggagatacacaccacmatgtatttcagcagagcacagaggctagacctgcctgacccaggagc
ccaaacagtgactcggcccagcctcaaagcccaccccaaggacccacacaggcaggaaggcaaacgcgga
ttgtgcakctctaccagggcaaagtgccagccaccgtccattcstwncagcaattccatctaaccttgca
gcctaggggctggccctgcccaactgcagagctsaaacagcggctccgcctggccasagagtmtaccccg
tggcycagcccaatagacgcgactncaacgtccantcagcggctccgcctaannncagagcccagccagc
agccccgcctgacctcagagcmcaggcantagcccgnccagctagagaacccaamagcaagcactgccta
cccatggttattaccagctgtcccatccagaatcacaagctggactgaataatgaaggtctwttcctgnc
gaagaacacctgtaaaagccagaagaggtggctgcctmgtcaaatgcatggataccaatgcaaggacgca
agggttacgaagaatcaaagaatcatgacacctccaaaataaactaacaaagctccaacaatggamccta
aagaaataaagatctataaaatgactggcaaagaattcagaataatcctcttaaagaagttcggtgagct
acaagaatacatagatagaaaattaaataaaatttggaaaacaatacatgaamaaaacgaaaagtttgac
aaagaaatagaaacgawtattctaaaacccaaatagaaatcctagagatgaagaacacaattgctgaaca
aaaaaattcaataaaaagcttcgacagcagactcaatcaagcagaagaaagaatcagtgagctcgaagac
agaacatttgaaattatccagtmagaggatcaaaaataaaaaaaatgaaaaacagtgaagaaagcctata
ggaattatgggacaccatcaagaaaactaacatacgcataatagaaatnccagaaggagaagagaaagaa
ggccagaaagyatattttaagaaataatgactgaaaacttcccaaatctggggaaagatgccagcatcca
ggtacaagaagcaca
>L1M3D_5   L1M3D_5 LINE1 repetitive element - a consensus.
gagtgacatcagcaagatggcataataggaagccctggacctttcttcccttcacagacacactgattca
gcaacaattcacggaaaattacctttgtgagaaatgcagaaactagttgagaggctcctgcaccctgggc
gagcgcgaaaccagacccacatcaaagccggtagggagattcaggacaccctctcatcgaagtccctccc
cccggcwcagcgcmgtgcgatcggaaggaaaaaacccccaactcccggcttctcccaggggaggaaaaga
gttggttcgcacgtcaagtgccccracttttccgaggggctacccagaggactgtcttctgtcttgccwg
tctcrgagctctgataggcccggcataatctagacacccgggggagaacagagatggtggtttgggctgg
tagatgccatagctnctcacccctgctcagcacagaacaagnagatgaaaacccccagntctcagctttc
ccctgaggaggaaaanagttgaatggactggaaaacagaattgaatggagcatccaacaatccagctttc
tgggagtgcctaaggaaccgattgcatttcaacttgtcgcgctacgctgatangattnancataccctan
atgctcggcgactgcaaagaacaaaaancaggttggactagtacgaaggtttgagaggnccccaaaatct
ctggctaggctgatcggtgaaggtcttctcctgcataaggccagtctgtgaagactgagagaggtggctg
ctttgtataatgcgcagacaccaatacagagagtcaaggaaaataaagaatcagggaaanatgttccaaa
caaaggaacaggataattttccagaaactgaccctaataaattggagttatanaatttacctgacgaaga
attcaaaacaattgttntaaagatgctcatgaataacatgataaagatgctcaccaagatcaggaaaaca
atacatgaacaaagtgagaatttcaacaaagagatagaaaatgttaaaaagtaccaaacaaaaatcatgg
agctgaagaatacaataactgaactgaaaaattcactagagaggttcaacagcagactagatcaagcaga
agaaaggatcagtgaactcaangacaggtcattcgaaattatcgagtcagaggagcaaaaagaaaaaaga
atgaaaaagagtgaagaaagcctaagggatttatgggacaccatcaagngaaccaanatacacatcatgg
aagtcccggaaggagaagagagaganaaaggnccagaaagcntattcgaagaaatagtgactgaaaactt
cccaaatctggggaaagaaatggacatccagatncaagaagccca
>L1MA10   3'-end of L1 repeat (subfamily L1MA10) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctgggggragggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
ataatactggattgtacacttaaaawttgttaaaagrgtagatctcatgttaagtgttcttatcgcacaa
caaaaaaatggggaacttttggrrgtgatggatatgttcattatcttgattgtggtgatggtwtcacggg
tgtntacatatgtcaaaactcatcaaattgtacacwttaaatatatgcagtttttagtgtataattatac
ctcaacaaagctgttttaa
>L1MA2   3'-end of L1 repeat (subfamily L1MA2) - a consensus.
ytaatatccagaatmtataaggaactcaaacaaatcaacaagaaaaaaacaaataatccmattaaaaart
gggcaaaagacatgaayagacatttctcaaaagaagacatacaaatggccaacargyatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaacyacaatgagatatcatctcaccccagttara
atggcttttattaaaaagacaaaaaataacaratgctggygaggatgtggagaaaagggaactcttayay
actgttggtgggaatgtaaattagtacarccaytatggaaaacagtttggagrttyctcaaaaaactaaa
aatagarctaccatatratccagcaatcccactrctgggtatatayccaaaagaaaggaaatcagtatat
yaaaragatacctgcactcccatgtttattgcagcactattcacaatagchaagatttggaatcaaccta
agtgtccatcaacrgatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgaratcytgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agycargmacaraaagacaaacaytgcatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtnggaggattggggggng
gkgrrgagggatggttaatgggtacaaaaaaatagttagaaagaatgaataagacctagtatttgatagc
acaacaaggtgactatagtcaataataatttaattgtacattttaaaataactaaaagagtataattgga
ttgtttgtaacacaaaggataaatgcttgaggggatggataccccattttccatgatgtgattattacac
attgcgtgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaat
taaaa
>L1MA5   3'-end of L1 repeat (subfamily L1MA5) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaataccgcatgttctcactcatatgtggaagctaaaaaagttgatctcata
gaagtagagagtagaatagtggttactagaggctgggaagggtagggrgaggggggratagggagaggtt
ggttaawggrtacaaaattacagttagataggaggaataagttctagtgttctgtagcaccgtagggtga
ctatagttaacaayaatttattgtatattttcaaatagctagaagagaggattttgaatgttcccaacac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacawtgtatac
atgtatcgaaatatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaa
>L1MA9   3'-end of L1 repeat (subfamily L1MA9) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgatctcacttatatgtggaatctaaaaaagtcaaaytcata
gaaacagagagtagaatggtggttaccaggggctggggrakgggggaaatgggaagatgttggtcaaagg
gtacaaagttkcagttatgtargatgaataagttctrgagayctaatgtacagcatggtgactatagtta
ataatactgtattgtatacttgaaatttgctaagagagtagatyttaagtgttctcaccacanacaaatg
gtaactatgtgaggtgatggatatgttaattagcttgaytgtggtaatcatttcacaatgtatacatata
tcaaaacatcacgttgtacaccttaaatatatacaatttttatttgtcaattatacctcaataaagctgr
aaa
>L1MB3   3'-end of L1 repeat (subfamily L1MB3) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaacgccactgaactgtacgcttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaaaaaaa
>L1MB6_5   L1MB6_5 LINE1 repetitive element - a consensus.
ggtaatgtcagcgaaaatggcggagtaaggamctccgaaaattcactcctccataaaagcaatgaaaaca
ctggcaaaaattgtcagaatcaactttttcagaactctggaaattaaccaaaggcttacagcaatctagg
aagtgtttattcaagaaaaayagctgaatctcwgtaagaacagcgagctttgtggtattttaacttgccc
tantcccatcccccwctctccagctcagcagtagccttgaaaataacagcttatattatggtgaaaacca
gcagccaccggagkgggcagaacgggtttggagcttctcaaaagycncattcccagggaattgtcattat
ttgacctgtctggcggctccctggaagactccattcamagggcttgtctttatttgacctgactcagagc
tcactcagtgcgaamagcattatacctgggggcatttgttgaaaacawttagaggcaawtgtttaacacc
acagctgcctgaggcagtgrataacagttggggcaaacaagaggctgaccaaaaagcttaaaaggaaaag
ctggggaatgagatgtccgnaggggctttgaaaagctccaacatattcctgggaatctagaaggccacgc
gcatgcccagggctgtacacatgctcagaaaagacctaagaaggccctaagctctcacctctggctgacc
ttgagactctgcacaagcaggaagtgaagactaaggcagagttgtaaactgcctggctgagtgttgaagg
tatgccccaacacacacacagaaccccttggcaaagamtgggagacttgttggttcmaggcatttaagga
aatctctgtccaatcattagctgaccactaagctaacngagcagagacttcagtggccacacatgacaaa
gaatacagactttacaaaattagttcagaaaagtcactaaacaaacagcaacaanaacacaaaagagyaa
caacaaaccctggaaaggagggagaatctgatttccagagttgccacattatattatttaaaatgtccag
ttttcaacaaaaaattacgaggcatacaaagaaacaagaaagtatggcccatacacaggaaaaaaagcag
ttaatagaaactatccctgaggaagcccagacgttggacttactagacaaagactttaaatcagctattw
taaatatgttcaaagaactaaaggaaaccatgtntaaagaantaaagaaaaatatragaacgatgtctca
ccaaatagagaatatcaataaagagacaaaaattataaaaaataaancaaatagaaattctggagttgaa
aagtacaataactgaaataaaaagttcactagaggggtacaacagcagatttgagcwggcagaagaaaga
atcagcgaacttaaagataggtcaatcgagattattcagtctgaggaacaaagaaaaaagaatgaagaaa
aatgaasagagcctcagagacctgtgggacaccatcaagcgtaccaatatatgcataatgggaatcccag
aaggagaagagagaaarkggcagaaagaatatttaaagraatagtggccgaaaatttcccaaatttgatg
aaaaacatywayctwcayatccaagaagctcaataamctccaagtaggataaactcaaagagatccacat
ttasatgcatcatagtcaaactgctgaaaaa
>L1MB7   3'-end of L1 repeat (subfamily L1MB7) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctataattaaaaagacagacaataacaagtrttggcgaggatgtggagaaattrgaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactttggaaaayagtttggcagttcctcaaaaagttaaa
catagaattaccatatgacccagcaattcyactcctaggtatatacccaagagaawtgaaaacatatgtc
cacacaaaaacttgtacacgaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatccatacaatggaatattattcagccat
aaaaaggaatgaagtactgatacatgctacaacatggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggycacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctgggggraaggggaaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctaaaattagatagtggtgatggttgcacaactytgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaarctataa
>L1MC2   3'-end of L1 repeat (subfamily L1MC2) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatccaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catactcttaccatatgatccagcaatcayactccttggtatttacccaaatgaattgaaaacttatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaagaaatgaactatcgagacatgaaaagacatggaggaaccttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaactatatgacattctgaaaaaggnaaaactatgg
agacaagtaaaaagatcagwgattnctagagkgastrggarrgggagggaagaataggtggagcncaggg
gatttttagggcagcgaaactattctgtatgatactataatggtggatacatgacattatacatttgtca
aaayccatagaactgtacaayacaaagagtgaaccctaatgtaaactatggactttagttaataataatg
tatcaatgttggttcatcaattgtaacaaatgtaccacattaatgcaagatgttaataatagggtaaact
rttgtgtgggggagggagtatatgggaactctctgtactttctgctcaatttttctgtaaacctaaaact
gytctaaaaaataaagtctattaataa
>L1MC3   3'-end of L1 repeat (subfamily L1MC3) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgawacyactatatacgt
atannaraattaaacaaataagtaaatgtatkgtagatgatgggagccaggtttctcactgtcggagtga
ggagttacagataagcaaagggaggagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccgctgagagggccta
gaagcaacgacaccccagtagcaatgagcacacctagcacccagatcttggtttctaataccattctcca
ataaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatatacaagatgag
cctggaacatcttgcartgccagaaaataaggaagtgctcaaaaacacaatgatrggggtatgtcaaagg
gacacagragccaactgaaagagctcccaatggccaaagctggaacaatttgagcaacaaaataaattat
rgtagtattggattataacycaaagtataaaataaatatccatgagtccatactgatataaatgaatgat
taaataaataaataaattgagaagataaataagtctctnntgcagaagaatttcaaataatttatgtaga
tarcctnccctcaaggaagtggagcgtaactccccactccttaagtgtgggatggatatagtgacttcct
tccagaaagcatagtataggacggaaaaaaaagtaaatttacwgtagagaaacctgacaaacactacctt
agccaggtaatcaaagttagcatcaacaattgtaagtcatgttgatagyatatacccttgatatgatgtg
ataagaatggcacttcacctccgtggtcttcctcccaaaaacccataaccccagtctaatcatragaaaa
atatcagacaaattccaactgagggacattctacaaaatacctgaccagtactcctcaaaactgtcaagg
tcatcaaaaacaaggaaagtctgagaaactgtcacagccaagaggagcctaaggagacatgacaactaaa
tgtaatgtggtatcctggatgggatcctggaacagaaaaaggacattaggtaaaaactaaggaaatctga
ataaagtatggactttagttaataataatgtatcaatattggtttattagttgtgacaaatgtaccatan
taatgtaagatgttaayaataggggaaactggatgtggggtatatgggaactctctgtactatttttgca
actttcctgtaaatctaaaactatttcaaaataaaat
>L1MC4   3'-end of L1 repeat (subfamily L1MC4) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgaaactattttatatgt
attgtaggattgagcaaataagtaaacgcattgaagataatgggagccaggtttctcactgtcggagaag
ggagttacaaatatggaatgggggaagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccactgagagggccta
gaagcaatgacaccccagtagcaatgagcacacctagcgcccagatcttggtttctaaataccattctcc
actaaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatgtacaagatga
gcctggaacatcttgctrtgccagaaaataaggaagtgctcaaaaaatgatrggggtatgtcaaaaggac
acagragccagcttgaaggggctcccactggccaaatctgggacaatttgagcatcaaaataaataacgg
tagtaatggattataactcattgaataaaataaatatccatgagttcatactaatataaataaatgaata
aaagaaataaataaataagaragaaaggaaagytcttcttacagtagaatgccaactaayaaatgtagaa
ggaataaaataatagaaaaatcaccatttggcaaayaccacagtaataantgtttcaggcaagaaccatc
gatagatgctaaaattagtgggcgaaartttgatgagaaacgggatatttgcatagtctcaaagtatctc
yccacaagatatttattaattayaaagggaaaaatagtractttacagtagagaaacctggcagacacca
ccttaaccaagtgatcaaagttancatcaccaataatgagacaaattgacatcatgcgcytcctgatgtg
atgcgccgagaaggacacaacatcacttctgtgatattcytgccaaaaatgcataacctgaatctaatca
tragaaaatatcagacaaacccaaattgagggacattctacaaaataactggcctgtactcttcaaaaat
gtcaaggtcatgaaagacaaggaaagactgaggaactgttycagattgacggaagactagagacatgaca
actaaatgcaacgcgtgatcctggattggatcctggatcgagaaacggtgggagtttktayctataaagg
acattattgggacaattggcgaaatttgaataaggtctgtagattagataatagtattgtatcaatgtta
atttcctgattttgataattgtactgtggttatgtaagagaatgtccttgtttttaggaaatacacactg
aagtatttaggggtaaarggncatsatgtctgcaacttactctcaaatggttcagraaaaaaaatnnata
tayataaryagagaatgataaagcaaatgcggcaaaatgttaacaattggtgaatctgggtgaagggtat
acgggwgttctttgtactattcttgcaacttttctgtaagtttgaaattatttcaaaataaaaa
>L1MC5   3'-end of L1 repeat (subfamily L1MC5) - a consensus.
aaaaaaaaaayacatttctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatga
gtaccctyaggacccagattgtggtctctaaataccatttcccactaaaaggaaccagggctccttggag
aaatggctaattccaggtctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagata
gcaaggaagctataaaactactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgg
gacaatttgagcatcaataataactgcaatttaacacatcaaatatrtttaaatccatgagtttataata
aaaaaatctaattggtcacctttggagtgatgctagggaaccaactcattattttgaaaactggtaaata
aagggaaagaatcaagcatttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwga
tgagggaaatttctctttatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcac
cattttgcaacccctaatgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaac
tarasatytgcctcctgatggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatca
aacctgaatctgatcaagcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatg
ttaaatgacaccatrgggatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaac
ttttcttcaacaaataaattatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaa
agacatatcaaccaattacaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaa
atatatrtgtatacaattggaaatttgaacactgactagatatttgatgatattaaggaattattgttat
ttttaggtgtgataatggtattatagttattttataaaatagtccttatcttttagagatacatactgaa
atatttatagataaaatkatatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtg
gagctatagatgaaacaaaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagt
tcattatactattctctctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgt
tggacattaatttgttggcaa
>L1MD2   3'-end of L1 repeat (subfamily L1MD2) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatagtttggcagtttcttataaagttaaa
catacamttaccatatgacccagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccatacmatggaatactattcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctcaagaacattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttatatarcattcttgaaacgacaaaactatag
agatggagaacagattagtgrttgccaggkgttagggatrcaggraggaggtggatgtgrytataaarrg
gtagcatgagrgaatytttatggtgatggaacwgttctgtatcttgaytgtggtgrtggttacacgaatn
tatacatgtgataaaattgcatagaactaaatayryryryrataagtacaagtaaaactggcgaaatctg
aataagatwnatggrttgtaycaatgtcaatwtcctggttktgatattgtaytatagttttccaagatgt
taccattgggggaagctaggtgaagaacacacgggatcccyctgtattatttcttacaattgtntgtgag
tktayaattatttcaaaataaaaagtttaatttaaaaa
>L1ME2   3'-end of L1 repeat (subfamily L1ME2) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctcaaaaagttaaa
cacgcacctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacttgtacaagaatgttcatagcagctttattcataatagccmmaaagtggaaacaaccca
aatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatattactcagcaat
aaaaaggaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgtatgattccatttatatraaattcwagaacaggcaaaactaatc
tataatgntagaaatcagaatagtggttgcctctggkgagggtraatgactggraagggrcatgagggaa
ttttctggggtgatggaaatgttctatatcttgatcggggtggtggttacacgagtgtatacatttgtca
aaactcatcgaactgtacacttaaaatctgtgcattttactgtatgtaaattatayctcaattttaaaaa
a
>L1ME3A   3'-end of L1 repeat (subfamily L1ME3a) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctacaaaagctaaa
cacgcgcctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacatgtacaagaatgttcatagcagcattgttcataatagccaaaaagtggaaacaaccca
gatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatactactcagcaat
aaaaatgaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgnntgattctatttgcataaaatacaaaaccaggcaaaactaatc
aatgntgttagaagtcaggatagtggttgttctgggaatagtaatgactgtaaggrarcatgagagggct
ttctggggtgctggtaatgttctgtttcttgatctgggtgctggttacacggctgtgttcartttgtgaa
aattcatyaagctgtacacttatgatwtatgcayttttatgtatgtatattatayytcaataaaaaaaa
>L1MEC_5   L1MEC_5 LINE1 repetitive element - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>L1PB1   3'-end of L1 repeat (subfamily L1PB1) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgaggatgcaaa
ggcgtaagaatgatacaatggactttggggactcgggagatcgggrgaaagggtgggaggggggtgaggg
ataaaagactacaaattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcacaaatcac
cactaaagaacttattcatgtaaccaaacaccacctgttccccaaaaacctattgaaataaa
>L1P_MA2   LINE1 subfamily consensus; L1PMA2 subfamily.
[encoded data, 7739 characters]
tctcatgtaccccataaatatatacayctattatgtacccayaaaaat
>LTR10A   LTR from endogenous retrovirus-like sequence (HERV-I).
tgttaagtacggtgagttctgagatcctctccaaagaaccagtatgtcagtatgttcagctcncctgttc
tttgttctccattttaaagtttaacttcagtatgttcagctcncctgttctttgttctccattttaaagt
ttaactcaacagttctaatcagtagttaacgcctgttcccctggtcacctgctccatcctgactcatccc
gggtcacctgctttgacctgagtcacccttagtcacctgctctgtaaccatccttcccgccaaactactc
accccgccactctggctcatacccctgctctctttaaaatagccaatcggaattagcttagactgtgcgg
tccaaccctagccaataggggaacgacacagcagtaggggctacctgcatcaggaataagaaccccttcc
cctcccttgtccaggtgtgctctcgccattgctccatctgcgagacgcacccttctatagaagtaaaatt
gccttgctgagaaaattaaatttatgtttgagtgctatttcttttgcggcaccgaaacgaaaattaaatt
tatgtttgagtgctatttcttttgcggcaccgaaactttatttataaca
>LTR16A   LTR16A repetitive element - a consensus.
tgtgacggacatgraggtgcgctgcccagatcccccttcaagaacggaartyttattncccyagctgctg
ggagwgctgtcggcagacagccctcagctgtcagccccttcaggaattgcctcngctgaagagagccgcc
tcgcccaaggtcacgccccctccccggggcagcccacatccaatgactgrtcaatrtggaggtataaagg
cccggccctctcgccccaactcgggacaactctgaagggccatyccagctccagagctccccgtggggtc
ggctgaggcctttgttgcgactgcattgcagcccaacttctccctctgcccaatcctgcttccttccctt
cccttccacaggcgttgatcccaagggcgctccctaataaacctcctgcacgctaatctccatctcagag
tctgcttcccggggaacccaacctgcaaca
>LTR33   LTR from endogenous retrovirus-like sequence (HERVL33).
tgtgctggatatcttctgtttgcccctccagatccactctccacccttctccaccctgctctgtgccccg
ggaggctgacctctatggactgcatcamcgggctcccttgccctctggcttctggttgggtttggccaat
gggaggcactggcaggagattggagggtggaaggagagwgagatcggggtatttattccccyggctccct
ccctgctgggctgcggtttggcagtggctgcgttcctctaccgaaggccacagctcctgtcgggcagccc
tctccttgtagctacagctmcagctctctctgggttccggtaacmgctccctccccttgccccttcaggc
ctaggggtggtaacagctycccgctgttgctagccccggggtgcttcaccatcccttgttggtttccctt
aaccctgcccacacctttgtaaatagtcccttcattaaactctcctcaattactccatttgagtgtgcca
tctgtttcctgccgggaccctgactgataca
>LTR54   Long terminal repeat - a consensus. 
tgttaaataaaatttataggaggccattgttttggactaagctcctgcactaggccccaacagaacagac
caaaccaaaatggagtcactcatgctaaagttccatgtcaccaagctgaaactaagttgtttatctgacc
ttccaagaaatcaggagagagagagagataacagccaaatccccaaacaggccagttttagccagcatga
taaggaagtcccctctgctttaacctttaacctaatgttaagcaatcagttacttntctattgttctgtn
tccctgtnttaaccttacaaggaaagtaactttgaaatgaccaatctgctttttgttctctgtttctgct
ttcttcagcccttttctgtctataaagccaacctcctctgctcagctcatyggaacactcattctatttt
atagaatgaggtrttgcccaattctagaatcacaaataaaagccaattgagatctttaaactaaatttgt
tgtaattttgtcttttgaca
>MER103   MER103 repetitive element - a consensus.
agttccatggtcaaataagtttgggaaatgctgggttaaacaaagttaaacaggtttctttactgcagga
cttctcagagcctttaatatgctaatgtgcattgtgaatctccaagaggggaaatatagtatgcagtrtt
tcccaaatttatttgaccatggaact
>MER104   Non-autonomous DNA transposon - a consensus.
taccatatttcattgaatctaagatgccatcaattgtaagatgcaccattattttatgtaccactaagaa
agaaaaaaatgctgccaattaaactataacatgccattaattgtaagatgcatcccaatttcagagatgt
taaaatgtgaaaaaatgtgcatcttagaatcgatgaaatatggta
>MER21B   Long terminal repeat of retrovirus-like element - a consensus.
tgtgatattgtgaaatatatatttggtcttcgnccccgtttcctggcacanagctcctaaaacccttgga
atctccngagtgataggagtntctttgtgtgctaatgagntgactgntggctggcggcccctaggtagct
tcaggatgggggctggtcaccagaaagaccaaggcangattagagggttgggactttcagccccaccccc
caacctccagggaggggagaggggctgaaggttgagttgatcaccaatggccaatgatntaatcaatcat
gcctacgtaatgaagcctccataaaaacccaaaaggacngggttcggagagcttctggatagctgaacac
gtggaggttcctggagggtggcgngcccggggagggcacggaagctctgcgccccttctcccatacctcg
ccctatgcatctcttcatctggctgttcatctgtatcctttgtaatatcctttataataaacnggtaaac
gtaagtaaagtgtttccctgagttctgtgagccgctctagcaaattaatcgaacccaaggagggggttgt
gggaaccccaatttatagccggtcggtcagaagcacaggtnacaacctggngcttgcgactggcatctga
agtggggggcagtcttgtgggactgagccctcaacctgtgggatctgacgctatctccaggtagatagtg
tcagaattgaattgaattagaggacacccagctggtgtccgctgnagaattgnttgcttgcttgtnngtg
gggaaaaacccccacacatttggtcacagaagtnttctgtgttgattgtnntgagtgagagaatagaaaa
aacactttgtttgtgtttttcca
>MER3   Nonautonomous DNA transposon.
cagcgctgtccaatagaactttctgtggtgatggaaatgttctatatctgcgctgtccaatacggtagcc
actagccacatgtggctaytgagcacttgaaatgtggytagtgcgactgaggaactgaatttttaatttt
atttaattttaattaatttaaatttaaatagccacatgtggctagtggctaccatattggacagcgcag
>MER31A   a consensus.
tgacaaagattctctgcttgaccaaactttagtcaggctcctgaaccttctcctaggcccatctgtgcac
ttccttgtaaaatccagttttagcaaagaaccctgctaagtcagtttagcmagaaccccccacccttgat
atctgatcaccctcaatatctgatcgggttcctcatcctccaccatcccccaggtgatgtctgatcaccc
tggcctgtcttcagcaagaatcctgttaggtcggtttagccagaatccccctacccctgatgtttcctct
tagtaattttccatccactgacccctcaccctgctccttggctataaattcccacttgcccatgctgtat
tcggagttgagcccaatctctctcccccactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtcttccttaccatgctttaacaagtatcattgaataattttttctttaaca
>MER44B   Nonautonomous DNA transposon.
cagtagtccctccttatccatgggggatatgttccaagacccccagtggatgcctgaaactrtggatagt
acygaacyctatatatactatgttttttccyatacatacttatgataaagtttaatttataaattaggca
cagtaagagattaacaatantaactaataataaaatagaacaattataacaatatactgtaataaaagtt
atgtgaatgtggtctctctctcaaaatatcttattgtactgtactcacccttnttcttcttgtgatgatg
tgagatgataaaatgcctatgtgatgagatgaagtgaggtgaatgatgtaggcattgtgatgtagcgtta
ggctactattgaccttctgatgtctgatgatatgtcagaaggaggatcatctgcttcaggtgatcctgga
tcattgagccatgacaatgtcgatggttggatgtcaggagcagacaatgtcgatgactaatgggtggrta
gcatatacagcntggatacgctggacaaagggatgattcacgtcccaggtrggatggagcaggacagtgt
gagatttcasccatcatgctactcagaacaatacacaatttaaaacttatgaattgtttatttctggaat
tttccatttaatattttcagaccacagttgacyatgggtaactgaaaccacagaaagtnaaaccayrgat
aagggagaactactgtaca
>MER5A   a consensus.
cagtggttctcaaagtgtggtccccggaccagcagcatcagcatcacctgggaacttgttagaaatgcag
attctcgggccccaccccagacctactgaatcagaaactctgggrgtggggcccagcaatctgtgtttta
acaagcyctccaggtgattctgatgcatgctcaagtttgagaaccactg
>MER63C   MER63C repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaggwaatgymtkgatttgtgtattca
catatataagtttattataaattttactgatataaaggacgtrtagcacacaatttacaaataacaataa
aatatacaatattctttattgtaaattccatatagccagttgattctcacagaatgctttcgttgatttt
tgcccaaactcttgtatccgtagccgaactatgtttgtaattgacgaacaagtgtagttcnaacatgaat
gttggttgatattttcgtttatgttaatgagtaagatgaaagtgaaacaacgaagacgtatgtcagaact
tcactcatttgtcaatgatgtgagtgacttctttgctgaatcggatggtagttttcaaacattagaagaa
tattttctcaatttttggtgctattcgcaatgtaacagctacagacatgacacacttttaagtttaatct
gcatcattaacattttctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctga
tttgtagcgtttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccagcgtgat
gtcactgaatgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagat
acaatagacgtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatga
gttttgagtatttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttc
tttgtttttaatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccg
atacgagccagctccagcacaccactgg
>MER65A   internal sequence MER65I belongs to the MER4I-group; subfamily MER65A.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER65I   MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>MER68A   MER68 LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcatctgggaacttggatttcgggagggttcccaccattcccwkaactgataagagtggct
cactgtgcctaaactgtttgtgcaaacaatatggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacgtgctaggcagagggtgcctacgtgaccagcccccartaaaaaccctgggcactgagt
ctctaatgagcttccctggtagacaacatttcacatgtgttgtcacaactcgttgctgggggaattaagc
gtgtcctgtgtgactccactgggagaggactcttggaagcttgcgcctggtttcctccggacttcgcccc
atgcgccttttccctttgctgattttgctttgtatcctttcgctgtaataaatcatagccgtgagtatga
ctatatgctgagtcctgtgagtcctcctagcgaatcaccgaacctgggggtggtcttgggaacccctaac
aca
>MER69A   MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcataggccccttc
caaggccctgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgt
ataagcttcaggccccacaaaacctggatctgcccctgg
>MER69B   MER69 repetitive element - a consensus.
cagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccacaattggttaagactgctgtctctttccactccgacttcccctccatcacacttcccc
tcatgtcgggtggtattggagtggccgtgggcatttttgggatctggctaagggaaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtataggaatggcttccaggaayattcctactgcccactgtgccgactcacccagc
gtcgtgacmtgaggcacaggaccggagrtcgtatcgcgatatgaacgtgtcctacggcacctggcaccgg
aagtatgcgggtagtggaggagaaacaaggtttgaaatgtacagagccagaagctagtctgtggaaaatt
cttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgatgcctagycagagcaga
agttctctcctgtcagaaatatactcgataatgcagcgtatacaattataaatgcamcatgcatttattt
gcatttttggaagggaatcatgcgaaatagaatttatcagaantccttgtttgtagggcacagatctrta
gcagtactacaaacagtgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgctgatatga
catgaaatwctgacgttaacgaagataacasttcacttctaatttaccatgacaaaaaagacatcagtga
caaactggttactgagtgtcattaattctaagagyatttaagattagtcactgcacaagaaaacttgaaa
tgccctgaaatcttacagctcatatatgaaagaaacttgataggggtttccccaaatttgacaacaattc
taaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaacttttctaaactatcaataat
aaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctatagaaaat
attacaaaatcgttgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaaaartat
tatagaagtgtgtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatgtttgtg
gtatttgtcaactttttaaaatttgtaatttgttgcgatttcttttctcattctaaataaatattcactt
ttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgtataagct
tcaggccccacaaaacctggatctgcccctg
>MER74   Putative long terminal repeat of endogenous retrovirus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER74A   MER74 repetitive element - a consensus.
tgtattaaccatgttttttattttctgtattcttgatgctttgacatctggggccttgctgaccctggag
ggactgcccctcccagggctagccaattcctagagatagcaaacgactcgcctgggagcgcgcctttcat
atgcaaaccaaccaatccagagcccacacccccaaccacctcctttatcgggctctcacactctgggcca
ctatccccctgccctaatcaccccagggccaggtaccagacaactagggacagcccctataccccagagc
ccgctgaaattattcaaactagccaatcctaagcctgcttaccctgccttgcccattccttcccatggaa
accacaataaaggctcttgcccacgttttcccgtcgctccctctgcctcctgaccgaccctggtgcttcc
ccgtgtggccccccgtggcgtggcgtgcccccttctcttgggawctgtgagtaacaaactatcttttcaa
tggcagtcgtctcctgatctgttggccttaccatacctgaataataataaaacctacattttaaaaca
>MER77   Long terminal repeat of retrovirus-like element - a consensus.
tgtgcagtaaagggttaactcagcaggcctgggttgtccaaaccctgcacattccaaagaaaganctggc
ccttgaccggctcctgggagataacctctaagcccttggaatatcctgcctgataagagtgtctttgtnt
acctggrgccttgggccacgcnagatagtttatgctaacaatgtgatttatggtgggggccttgggccac
gctgtatcagtttgacctctggaggggctggagactgagtagctaaggtcagccacgcgggcgctccatg
cctacatgaccgacccccaataaaaaccctggacaccaaggctcgggtgagcttccctggttggcaatac
tctntgcatgttgtcacacatcgttgctgggagaattaagcgctgtctgtangactccactgggagagga
caactggaagcttgtgcctggtctctcctggactccgccctatgcgccttttccctttgctgattttaat
ctgtatcctttcactgtaataaaccataaccgtgagtataacagcttttctgagttctgtgagtccttct
agcgaatcactgaacctgagggtggtcttggggacccccgacaca
>MER80   MER80 repetitive element - a consensus.
caggggttcttaaccttttttgtgccatgggcccctttggcagtctggtgaagcctatggaccccttctc
agaataatgtttttaaatgcataaaataaaatacataggattacaaaggaaaccaattatattgaaatac
agttatcaaaatattaaaaaaccaaatttgtgatatagtaatatatgtgcttctttattaatgcattaaa
taacaagatctagcggcgggtctaataactaccgtaatttcgaagtagtgatgagcataaatgatatttt
gagatatctgcaacaactgtaatgtgatatgaaaatatctgtgatttctattggtgacaaagtcacaggt
actgctaatactactgtggtttgttgcctacattcataattgaaggaaatgctaaatttcagttagaggt
tagtgaaaataaagatgtaanttttttccccatccaagttcacggaccccctgaattctatccatagact
ccaggttaagaacccctg
>MER82   MER82 repetitive element - a consensus.
cagttgatcctcattatccacagtagttatgttctataaagtcaccgcgagcactgaattagcgaatact
gaaccatcgctcctagaggaaatacagagttaggttcctgcaagcctctggtcacaacattttcatcaac
cgatcaatatataacyttgttttatgtgtgtttctgtttaaagacnncttatttaatatatattgttgat
ttattaacactgaactcacagccaacagcactataactcatgcctgaatgaagcttatctaacacacata
ttttctccataaggtacatcacagccttcttgtgcttaggaacaccagacagcacttcagcactatgctc
ggggccattttaaacggcgaaatcaccaacaaaaagcacaaaaatgtgaaaaacgtggcactaaatagac
ctcgaaaaggacgcttgtttacggtatgagagctgaaacaagaaggcagagcgtcgccttgttcgacctc
agctgggaacgtgcacgtcgggcgactcgaatttttcgctgctctgcgcatgtntgcaaatgaccgngaa
agtgctncaagtattgattttggggttacaaataaattttagcgagtaggcgaattcgcaaatacggaat
ccgtggataatgaggattgactg
>MER91B   MER91B repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
catcacagatttgtataatgacaattttccaacagatggcagtaaagtgtcttgaggaaggggcgccttt
ttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>MER92C   MER92C repetitive element - a consensus.
tgacaatgcwgaactttacctgagccctgtgctcccggaaaacagcgatggttaagaaatccccccatcc
ttttgtgttccnagaaacggcttaccgcaaagaactacccttccctatatgacttaaataagactctctg
ncccttctttctcacgacttccataagatcannnatgattccttncctgnnaagaccaaacacagacctt
tccccttttgcctgaacccgctgacaaggccagacacggaccctccaacttcctattctttgtttcataa
atgattagctgagattagaagngtctgtccccctgaaactagctagacacagagataaacatttcctgtt
cagctaaccgagacttcccctgattgcaaaacaaccccccctgtaaatctccccacntgaaacctatcta
ccccttcctataaaagtccaaggcaaaaccaccctgccgagacacttcatagtcttcggatcttggatgc
tctccctattgcaatagcctgaataaaatcatctccttamttgtctagtgcattttgtctttca
>MLT1J   (MLT1j subfamily) - a consensus.
tgtggcagagactgctagttgtcccccaatatccattctccccttcttccttagtaatagaamccccaat
ttttagctgggcacatggccacccagaaataaagactacatttcccagcctcccttgcagctaggtgtgg
ccatgtgactttctaagttctggccaatgagatggtaagcagaagtgatgtgtgcaacttctaggaaatg
tccttaaagagaggggcaygcccttcttttccccttcctccttcctgctgcctggaatgtagatgtgatg
gctggagctctagcagccatcttggaccatgaggtgaaagccacatgctaaggatggcagagcagcaaga
tagaaggagcctgggtccctgagactatggagcagagctgccataccagccctggactgcctacctctag
acttctatatgagagagaaataaattctatcttgtttaagccactgttattttgggttttctgttacttg
cagctaaacctaatcctaacayacca
>MLT1R   MLT1- LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MLT2E   Interspersed repeat MLT2E - a consensus.
tgctggattgttctgttgtcaacttngttaagctnggaactatgtttcccagaatccccttccctgtatg
gttctgggttagagttggccaaagatgaaattgtggaagatttggaaggcagaagtgaagcagcagccat
tacactctgaaggtcatcattggttasaggcagtgagagatggccagatgcagaggtgcccaggaggttc
cagcttgtcctcactctcccctgctcyatatccagctcttcttcctgaccactggccctgctgaccaaca
gcarccccaggcccaccaccagatgcttggctgcaaactcacagaggtagtngccacacagagncaacaa
ctttccatagagttctccaccagctccccttcatggtcncacttyagcggctggatatgcttagcttcaa
atttccccacaagctccagnctcattcaactncgccagagctggttagtgaccctttttctgatccttca
actcccccctccagaccttcacttccccagctcctcccacaattgtataaggtctaattcctataataaa
tcccttattccatanatactacatagtggctctgcttccctgactganacctgactaataca
>MLT2F   Long terminal repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttggctaggctggaactacatttcccagaattcccttccctgtat
rkttccaggttagggtgggccacaagagacattctgtgtgagatttggaaggcggaagtgaagcagcagc
cattttgttttctgtgctcggagaggtcagagtcagcaggcgctgttgcagctcacacacgttgtcgctk
atctgctggctcacctcgttggcgtggggcagcagccgggcccgcagctgctccascttcccctggatcc
tccttcagcttctccgactcctgggccaggtgtgtgtktagctccgtgacgaagggcgccagcttctcct
gcaggacacccacatcatcgaggtcggaggcagtgagagactgacatgggttccagtttgtcctcgtggg
ttccagctcatgcttgtgggttccagcttgtccttgctctcccccactttatatccatcttcccttcctg
actgcctgccctgtggacttcaagctccagcatcagacgcaragacaacagccttacagagactgcttaa
ccagctcccacaattgcgtaaggtcaaatccctataataaatctcttattatatatatctcctagtggtt
ctgcttctctgattgaaccctgactgataca
>MSTAR   MSTa- LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>ORSL   Origin of replication-like (ORS8) region (a consensus).
ycccatacygtttccrtcactrgtytgwgcaccctctgcarggmagacagcatgayttttyatctttgaa
tycyyaaaasttagctcactgtgtgctcaaacgtgtattgaatgacagttgctatatttgaggacbacat
agattttggggaagacggacaggcacactagcagaaccatacgaaggccaggatcagtcatgaccagggc
tgcattatgacttgtgggccctgagcacttttgcttttatgggccccttcctccataaaaatattaaaaa
ttatattttatgactgcattggtataaagatgagaatataatccaggctgaattaaaacattttcttaga
ctctaaaatttcatttttttctgattttaaaagaaattaaaacattttyatggggccctaaagtattgtg
ggccctaggcactgtgcctactgtgcctaatggataagtcnagcctgaccagggcactctggtgtgaggt
tgaagaaaggaaatttggaacaaagaagccaagtgctctggagaagcaggtgaaacttccactgccgaac
aaaatcagaatgggagcagccatggttaataaggttgtggaagtttagascttccagttcacttcmcctt

>RICKSHA   RICKSHA repetitive element - a consensus.
gggtttggatcataatcccgaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatcctaaagtctaaatccctaaagtctaaaatccctaatgtctaaaatcccgaaaatcacaatca
cgaaagattaaaatctcaaatattgaaatcctgaaagccgaattctggggaagggattagtgcgttttcg
gttgtacgcaggatagttgcatcatgttagttgcatcatgttaggtggcagaactattaccttgttattg
tctttatttggaaattaagtatggtttaaggagacacgtatgggtgccaagttgacaaggagtggacttg
tggacttaattttaggtgtcaacttgactggattaaggaatacctagaaacctggtaaagcattattttg
ggtgtgtctgtgagggtgtttccagaggagattagtgtgtgagtctgagcggactaggcggggaagatct
gccctcaatgttggcgagcaccatccaatcggccgggggcccggagagaacaaatacagaaggcgaactg
gtctctctctgagagctgggacagatttttcttctgctgccttggacatcagaactctgggcttgctggc
tttggactccaggacttacaccagtcctnnnaaccgggtcctgaggctttcggacctcagactgagagtt
acaccattggcttccctggttctgaggcttttggacttggactgagccatactgccggcatcccagggtc
tccagcttgcagacggcctgtcgtgggacttctcagccaccataatcgcgttagccaattcttctaataa
attccctctcatrtatatatatatcatattggttctgtctctctggagaaccctgattaatacagatttg
gtattggggaagccgaatatcattccttcttactgtattccttacaacataatagaagagatctgtgaaa
ttgttccctcacaaaaaggctgtgataaaataagtggacgaggctactcaattgtgaaagataaaattta
aaagctaattattattggtgctgcaaaagcagaaaatcacttaattacaatggccgagcaataaccagct
tttaaatggacagcatatacttacaaaatttgtagaccacaaccactctgcaaatacacatgcagcaagt
gtcttgaagatggcaamartgaaaattcagtttaaaaatacawsaattscctgccaaattattcaatctg
tatgacttctacttctttacacaaaatttatgctatgtatttcatcttcgcatcatttccaatactggag
gtataaattgtgtagagacttttagagagttctaatttgttttatgcattttttgcaaatttgactccac
gaaagtgcattatcacaatgttgactttgtgtgtaagcattgtgcatgtatgtaaaaacgttgaaacttc
ctcaataaatgaagagatgtcctttttgtacatctgcatttgtgaaagataaaatttctcaagatcttgg
ctctttgggcgactgcatatgcggtggtgacccatcgcggtttttgatcgatctcgtcaaaagacttagg
ttgttcgtcacggtatttcagatgaccgcagttataaagctgggtgcacacaattaccaaccatagtgat
atgcgtttatacatttccctttttgacctatttctttatgaatacggttcgtctgctcataactgttata
cccgtgcgactgtcattagtatacctgagtgtttatgcttgcaaaaatatgtatgttattattgcctatt
ttattgtgtaaagtggcctatgaagtgttctgtcatgtttttatatgtttctcaaataaatcccctttta
aaaatgtaaataaattatcttttaaagaatttttaaattttttttcagaattatattttcgggattttga
tctttcgggatttcaacattcgggattatggcgtttgggattgtgtctttcgggattatgatccaaaccc

>TAR1   Telomere associated repeat sequence, complete sequence.
gatcaacagtgaggaggtcccacaaggctaagtggggcaagtcggggacctaaggcagtagcaggaaaac
caaagaaaacaggcggagacttgagacagaggcaggaatgtgaagaagtccaaaataaaaatccctgcac
aggactcttaggctgttatcatgcactatcagcctactcctccctatttttgtacaataagctctttaca
ctgtatttcttttcaatgaagttatcttccatctttgtactgcctcttggtgaaaagctgtcttccaagt
taataactgggacatcagctctctgcagtaatagctccttttcagttttaatttgcagaactgatgggga
ttaataactggcgctctgactttaagtggtgcaggaggcggccagtaggggacgccagccgttacgccgg
gagcaagagggccctgcgtagtccccatctgcctgcatgtggcgtgcagccacgacaatggcagcaagag
ggcccggcagtgtgcccagctgccagcaggcgggtgtgctgccactataatgtgaggaagagggccctgc
aatgtccctagctgccagcaggcggcgtgccaccactatactgcgagcaagagagccctgccgtgccccg
gcgccagcagggggcgctggacagcactgtaagcaagagggccctgcagttgtcctagtcgccagtaggg
gacgcaatggcagagcaccgtgggcaagctggtcctgtagtgcccggctgcaagcagggggcgcccgaaa
cgggcttttcagattactcaggttccactcgtctctgcgccgccggggacgtgtgtctctgcgcgtgcac
cgcgccacccccgcgctccccgcccggcggcgcgcgactgtgcgactgcaacactccccgccaccctcag
cccagcgacgtgcgtctctgcgcctgcgccgcgcctcactcccgcccgctcagcgacccctcccttccgg
ggaggcgccggcgtgcgtctacgccctgcgccgcgtctccccaacagcggcgcgcctctctgcgcctgcg
ccggcgcgccgcgcctctctgcgcctgcgccggcgcgccgcgcctctctgcgcctgcgccggcgccccgc
gcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgc
ctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgc
cccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctc
tgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgcc
ggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgc
ctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcct
gcgccggcgcgccgcctttgcgagggcggagttgcgttctctttagcacacacccggagagcatcgcgag
ggcggagctgcgttctcctctgcacagacttcgggggtattgcgaaggcggagcagagttcttctcaggt
cagacccgggcgggcgggctgagggcactgcgagggtggagctgcgttctgttcagcacagacgtggggg
gcaccgtaaaggcggagcagcattcttctcagcacagacgttgggggtactgcctgcctttgggataact
cggggccgcatcgagggtgaataaaatctttcccgtttgctgccctgaataatcaaggtcagagaccagt
tagaacggtttagtgtggaaagcgggaaacgaaaagcctctctgaatcctgcgcaccgagattctcccaa
ggcaaggcgaggggctgtattgcagggttcaagtgcagcgtcagaactcaaatgcagcattcctaatgca
cacatgacaccctaaatataacaggcatattactcatggagggttagggttcaggttcgggttcgggttc
gggttcgggtt
>TIGGER5_A   transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttaytgaatactgtactgaaagtraraaacagtatggttgtatgggtacttgaagta
cggtttctactgaatgtgtatcgctttcgcaccatcgtaaagttgaaaaatcgtaagttggggaccatct
g
>TIGGER5_B   Non-autonomous DNA transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttactgaayayartacactgtagartayyggttgtttaccctcgtgatcgcgcggct
gactgggarctgcggytcactgycgctgcccagcatcgcgacagagtattgtaccgcatatcgcyagcct
gggaaaagatcagaaattcgaagtacggtttctactgaatgcgtatcgctttcgcaccatcgtaaagttg
aaaaatcgtaagttgggaaccatctg
>ZOMBI   Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>ZOMBI_B   transposon - a consensus.
caggttgagcatccctaatctgaaaatccgaaatccaaaatgctccaaaatctgaaactttttgagcacc
aacatgatgccacaagtggaaaattccacacctgacctcatgtgataggtcacagtcaaaayacaatcaa
gactnnncnagcnnctncngttgctnttnctgccagncaacnacagnttgtgcacctngntggcaragan
actgacacatttgctttctkatggttcagtgtacacaaactttgtttcatgcacaaaattatttaaaata
ttgtataaaattaccttcaggctatgtgtataaggtgtatatgaaacataaatgaatttcgtgtttagac
ttgggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaatctgaaatc
caaaacacttctggtcccaagcatttcggataagggatactcaacctg
>ZOMBI_C   transposon - a consensus.
caggtccacaatcccttatctacaattctaaaatccaaaaagctctgaaaactaaaagtttttttataat
ttgaaactcatttggcagcaaaacctgacctgaactgatatgaggctatttatagtctttatttatccca
cttagtgtgaatattcatatatttcactgcagaaatattaatgtgtttgattatagggtgctgccccaga
ccccactgggggtgttatataatatatagtatatgcactatattacctttctaaaatctaaaaaattctg
aattctgaaacacatctggccccaaggatttcagataagggattgtggacctg
>MULV   Murine leukemia virus.
[encoded data, 7668 characters]
aatcgcgtgaataaaagattttattcagtttccagaaagagggggg
>LTRIAPEY   LTR from IAPE-Y retroelement.
tgtggagagccggtacgtgatgcaagcaattacgtgcgtgccgccagtaatctctgagaagagccatgtg
tgccgtgagcaatcaccattataagatggtgcgggcctccacagtgcctaactagtaaacaagccttgta
cgcaggtgcgagagtgaattcactcctattcactcccattctcggggtgtaatagtggggtgatgggcaa
gcaatgaatcaggagctgtctagccatatcaggtgctgaaacgtcacactgctggttataaaagcagtgc
cattttcccggatcggatcttggtgagaagcaagcaataaagctcttgctgaggaagattctggtttgtt
gcatctttcttgctggtcgagctggacgcaata
>IAPEYI   An internal portion of IAPE-Y LTR-retroelement.
[encoded data, 7597 characters]
ttaataaaataaaaaggggaaga
>L1M2_5   L1M2_5 LINE1 repetitive element - a consensus.
caaagaaatgtatktatgcaggagggcttcaagatggctgactagaggcakccggtactcgcctcctcca
caaagaagaaccaaaatagcgagtagataatcacacttcgaatagakcatctaagagagaacactggaat
tcaacagagaagcgacaggaaacacctaaagcaaggaaggagaaggaagcgaggcagcctgctcggccgg
gattggctgggagccaggagaggctccccaatgcggggaaagggtaagtgagagacccccagcggtccac
attcccaccacggactcctgcaatcctagccacgagagagcccctcaaccctcgcgggccctgagactaa
catagggagctgcctggagwccgcgcganggcattgctccagagagggagctcacgctgggtcccacama
cccccaagwcctaagcagctgcagcacggcgccattttgagagcccagccmccaccagactgcatcctgc
cctggggcccaacagcccctgcatctccacattcctggagccccastgacatnccccacccatggctgca
gctgctggggcaraggcaggaaccactggcagcaancccwcccctgcccagcagaggggtggccatacaa
tttcatryacaccaaggacaaattcccctgmctgcaaatgctaccactgngagctgctgtggagctgagg
yacgagcaatgcacncgctacccaggcgcctgcctatggctgctnccacwgaaagcaaccccaccctccc
cagcagcagggccacagtgcagccactgctgccctccacctgagcattccaccaggggcctggggatcac
cctgcccctgcctaccacagccggcgcctgcacacaccaccggggggcctgaggacaggcctgcccggcc
cagctctgccacacccmccagtgcccaagcacgccatctaggggcctggggatcgcccaacccagtccac
caccgctggcacctgagcactcctcctgggggcctgaggacgggcctactcagcctgccactaccaccac
agctggcacccacccacatgcgccacctgsrggcctggggactggcccgcccagcccgtcgcagccactg
ccaacaccaacacgcactgcttgggacccagagggttgtcccaccactgctactgccatcgcccatgcca
tgcyngctgcccaggggctcaagaacctgtccacccacccggcccaccgctgccactactggcacccaag
caagccacctggaggcccaagaatcggcctgcctggacccgctaacaccagtgccaatatatgccaccct
ggggcccaaggacaggcacactcagcccactantgccaccactggggcctgaagactggcccacctggca
tcccagtccccagcaaaacttcaccacagcctccactaacaaccacaccctaagccactgaggaaatcac
agacaccactgatgctgtttacagccaaagaaatcatacggagactacactactgcacgcacccagaatc
aaagccaaagcgccctacccaaccaacaccatagatacatctwcaggaaaaagtccttccctacgaaagc
tamtccataaaattggaagaagcgactgttacaccagatgtgcagatatcaacgtaaggacacaagaaac
atgaaaaagcaaggaaacatgacacctccaaaggaacacaataattctccagtaayagactccaawnaaa
aagaaatctatgaaatcccmgawaaakaattcaaaatgatgatattaaagaagctcagtgagatacaaga
gaacwcagawaaacaatacaaggaaatcaggaaaacaattcakgatatgaatgagaaatttaccaaagag
atagatatcataaaaaagaaccaaacagaaatcctggaactgaagaattcawtgaatgaaatamaaaata
catttgaaagcttcaanaatagactagatcaagcagaagaaagaatctcagaacttgaagacaggtcttt
tgaaataacccagtcagannnwaaaaaawaanaataaaaaagaatgaasaaagcctatgtgacatatggg
acacmattaagcgaacaaatatttaaattwtgggwgttccagaagaagaagagntgggnaaaggcnyaga
aaacctatttaataaaataatagctgaaaacttcccaggtttagcaagagattnagacatccagatacag
gaggctcanagatccccaaatagatncaacgcnaaaagggcctctccamggcacattatagtcaaactgt
caaaagtcaaagacaaagaganaattctaaaaacagcaagagaraagcatctagtcacatataagggaat
ccccatcagactaacagtggatttctcagcagaaaccttacaggccaggagagaatgggatgacatattc
aaagtgctgaaagaaaaagcaaaactgccagccaagaatactatacccagcaaagttatccttcaaaaat
gaaggagaaataaagtctttcccagacaagcaaawamtgagggaattcgtcaccactagaccggccctac
aagaaatgctcaagggagtcctamacctggaagcaaaaggacgatatctaccatcatgaaaacayacaaa
agyataaaactcactggtagagcaawcacacaaakgagaaagagaaaggaatcaaatgktaccactacag
aaawccaccaaaccacaaaganaaacaatgagaggaaacaaaagatatacaaaacaaccagaaaacaatt
aacaatatgacaggaacaagwcctcacatatcaataataaccttaaacgtaaatggattaaatttcccac
ttaaaagatanagactggct
>L1MCB_5   L1MCB_5 LINE1 repetitive element - a consensus.
tgacatgtaangagcttggaagttggcactcccttcaacaacaacaaaaagntgaacaaacagaaaaatc
aatgacttttcttagatccataagagaagtgaggtcacagggcaaactgtcancctgaaatctggagaga
caggcgcatgcagagaatcacagcagagctctgctttcctgaagcagaagcctctgggagcacaagctgg
taggaaaacttaaatggtaattttggcaaattgctagaggctgagtgtggactagtttgagagtaagaaa
ttctcggnggcccagtctaggggaacctccacactttcgtgggctttacctccaggagtcccactagttt
ctcacagtgaagatccgagaaanttcgcttcacggctctggcagggggaggggaaaagcaatcattktga
aatacgcccagagtattctccgtaacaaactcttgccctacaggagaaaatactttgccagagccttatc
ctagctttagggaagggtaatcacccaactccagccccctctagccttcctgtctcacctaaagggagaa
aaaaagctaagaaacacttgtgaaggtcacagcccagggactcaggcccactaaaagactgagatttaat
cataggattatagaacgtttcccttccccmataccttaccaccacatcaacagggctccagtataataac
aatggattacagctgaaagaactgcaaaacmcagactctatttaagaaggagctnctagggaaacccaaa
gacaggagaggagacaaaaacaaggacaccggagtraagtttagcctctgacacctacagctacagcaaa
cagtaaacacagtctaactcttagccagataaacataaaacctcacattaaaggcctatttacttcagtt
ccttttacccagtacatcatgtccggctttcaacaaaaaattacaaggcatactaaaaggcaaaaaaaaa
aaacacagtttgaagagacagagcaagcatcagaaccagactcagatatgacagggatgttggaattatc
agactgggaatttaaaataactatgattaatacgctaagggctctaatggaaaaagtggacaacatgcaa
gaacagatgagtaatgtaagcagagagatggaaactctaagagaagaatcaaaagaaaacgctagaaatc
aaaacat
>L1ME_ORF2   Primate L1ME LINE1 repetitive element - a consensus.
atggcagacntaaancctaacatatcaatrmttacattaaatgtaaatggattaaacactccaatcaaaa
gatacagattgtcagagtggataaaaaaacaacacccaacaatatacwgcctatmagagacacaccttaa
atataaagacacasataggttgaaartaaaagaatggaaaaagatataccatgcaaatwgtaaccaagag
aaagccggagtggctatattaatatcagacaaagtagactttaaaccaagaaatattactagagataaag
agggacatttcataatgataaaagggtcaatctatcagaaagacataacaatcctaaatatatatgcacc
caanatcagagcaccaaaatacataaagcaaatactaatagaactgaaaagagaaatagacaaatccaca
ataatagttggagacttcaataccccactgtcagtaattgatagatcaactagacagaaaatcaataagg
atatagaagacttgaacaacactatcaaccaactggacctaattgacatattatagaacactccacccaa
caacagcagaatacacattcttytcaagtgcacatggaacattcaccaagatagaccatatgctrggcca
taaaacaagtctcaataaatttaaaaaaattgaaatyatacaaagtatgttctctgaccacaatggaata
aaawtagaaatcaataacaaaaagatactctggaaaatncacaaatacttggaaattaaacaacatactt
ctaaataactcatgggtcaaagaagaaatcaaaagagaaattaaaaaatattttgaaataaatgaaaatg
aaaayacaacatatcaaaaatttatgggatgcagctaaagcagtgcttagagggaaatttatagcattaa
atgcctatattaaaaaagaagaaagatctcaaatcaataacctaagtttccaccttaagaaactagaaaa
agaagagcaaattaaacccaaagtaagcagaagaaaggaaataataaagattagagcagaaataaatgaa
atagaaaacagaaaaacaatagaaaaaatcaataaaaccaaaagttggttctttgaaaagataaaattga
caaacctttagctagactaaaaaaaagagagaagacacaaattactaatanatcagaaatgaaagaggag
ayattactacagatyctacagaaataaaaaggataataagagaatactatgaacaactttatgccaataa
atttgataacctagatgaaatggacaaattccttgaaacacacaaactaccaaaactgactcaagaagaa
atagaaaatctgaatagacctataactattaaagaaattgaatcagtaattaaaaaccttccaacaaaga
aaagtccaggaccagatggcttcactggtgaattctaccaaacatttaaagaattaataccaatcctact
caaactcttccaaaaaatagaagaggagggaatacttcctaactcattctatgaggccagcattaccctg
ataccaaaaccagacaaagacattacaagaaaagaaaactacagaccaatatccctgatgaacatagatg
caaaaatcctcaacaaaatactagcaaancaaatccaacagcacatgaaaaggattatacaccatgacca
agtgggatttatcccagggatgcaaggctggtttaacatayaaaaatcaaycaatgtgatwcactacaty
aacagrntaaaggagaaaaatcatatgatcatctcaatagatgcagaaaaagcatttgacaaaattcaac
atccattcatgataaaaactctcaataaactaggaatagaaaggaacttcctcaanataataaaggnmat
atatgacaaacctacagctaacatcatacttaatggtgaaaaactgaaagcwtttcccctaagatcagga
anaagacaaggatgtctactctcaccatttctattcaacattgtactggaagtcctagccagtgcaataa
ggcaagagaaagaaataaaaggcatacagattggaaaggaagaagtaaaactgtctttattkgcagatga
catgattttntatatagaaaatyctaaagaatccacaaaaaaacwactagaactaataaataaatttagc
aagntcncaggatacaaggtcaatatacaaaaatcaattgtatttctatatactagcaacgaacaatntg
aaaatgaaattaagaaaacaatwccatttacaatagcatcaaaaaaataaaatacttaggaataaattta
acaaaatayatrcaagacttgtacgctgaaaactacaaaacattgatgaaagaaattwaagaagacctaa
ataaatggagagatataccatgttcatggattggaagactcaatattgttaagatgkcaatactccccaa
attgatctatagattcaatacaatcccaatcaaaatcccaatggttttttttgtagaaattgacaarctg
attctaaaatttatatggaaatgcaaaggatccagaatagccaaaacaattttgagaaagaagaacaaag
ttggaggactcacattacctgatttcaaaacttactayaaagctacagtaatcaagacagtgtggtattg
gtataaggatagacatatagatcaatggaacagaatagagaacccagaaatagacccacacatatatggt
caaytaatttttgacaaaggtgccaaggcaattcaatggggaaagaatagtcttttcaacaaatggtgct
ggaacaactggatatccatatgcaaaaaaatgaasttmgacccctacctcacaccatatacaaaaattaa
ctcaaaatggatyatagacctaaatgtaaaanctaaaactataaaactyttagaagaaaacataggagaa
aatcttcgtgaccttgggytaggcaawgatttcttagatatgacacmaaaagcacaagcaacaaaaggaa
aaattgataaattggacttcatcaaaattaaaaacttctgctcttcaaaagacacyatcaagaaaatgaa
aagacaagccacagactgggagaaaatatttgcaaawcatatatctgacaaaggacttgtatccagaata
tataaagaactcttacaactcaataataaaaagacaaataacccaattaaaaaatgggcaaaggayttga
acagacatttcwccagagaagatatacaaatggccaataagcacatgaaaagatgctcaacatca
>MER44C   Nonautonomous DNA transposon.
cagtagtccccccttatccacgggggatacgttccaagacccccagtggatgcctgaaaccacggatagt
accgaaccctattgctatcagtcttttggaacatgtttctgttcatgtcttctgcccacaaatttaatgc
ctcttccacctcaactaaacacgtatcatgcactccggccatcacttttgcagtttgaggtatgacatca
aaactagcatgaatttatttttccttcttcacaattccaaagatggaagattctttcttaccgtagatct
tagcaacctcagcatacgattatttttcytttctttttaagtcaagaactttcaccttttcgcttaaagg
aagcactttacagcttctytttggcatgtccgaattgccaccaacactactcttgtgcttttgggccatt
attaagtaaaacgggagttacttgaacacaagcactgtgataccaagacagtcggtctgataactgagat
ggctactaagtgattaacaggcaggtagcgtanacggcgtggatacgctggacaaagggatgattcacat
cccggatgggacggcgcgaaatttcatcacgctactcagaacggcgcgyaatttaaaacttatgaattgt
ttatttctgnaattttcaatttaatattttcggaccgcagttgaccacgggtaactgaaaccacagaaag
traaaccacggataaggggggactgctg
>MER67A   internal sequence belongs to the MER4I-group; subfamily MER67A.
tgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcctcaa
cctcggcctataaagacttgaacaaacactaacatagtttctaatagctcaaggccacatccctaggatg
accctagcccccccttaaagtgcctgcctgagaaaactcaaggctgccaaaataatttactgtttgttcc
agccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaacttcgataag
cgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcacttccc
tgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcacc
tctgcacaaatcgaagctgagctcagttcacgctggactcttttccctactgcaatagtatattactgat
taaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67C   internal sequence belongs to the MER4I-group; subfamily MER67C.
tgtaagggcaaatacaaattaaaaataagaggcttnaattctccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgaa
atgtatgtaaatctttttaaaagctaaataagcctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaawcatcaaggaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaacttcagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
atgagaagtttatttttcctttggataaagccaattagctaacacagatggccaccccaattaccaggtg
aatttaggatgaactatgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtstt
tgcaatctcttagcagattgcctgtgatgcgcatcacattctggtttaatgcttattcaataataaaacg
tgttttctttctcttctacctttgtggagaggttttctgggttgggagragattttgtttttaattatat
ttccccaaca
>MER90   Long terminal repeat from endogenous retrovirus.
tgagaaagagaaaagcagcccctgacatctgagagctggcctggtaccnwcagctaggccttggtgttgc
tgggagctggcctggcactcacagctaggccttggtgttctcctgttgaacataaacaatttcacagaat
atcaacatcagacaaggccactctgtgaccatgatggatcgagacaaaaacaagaccactccgtaatcat
gtctgaacacagacaaaaacatgaacattgtccaagccacaaaaatgaccaagcatccccctctcccggc
taatatgagtgactgctgcttctttaccaattacagctttagcctcgctctagtcttccctccttctaga
taagatttattaagatacccaatcacagaattactcccgcttcctgacagcatccaatccagagcaaagc
ttcgcttccttaaaccctcccccaaatcacctaacacaagcccaaatcctataataagtcctttctaaca
tcctcttactgagacgccccgtggttccccatggtgtgcgttctccctcgctgcarcgagcaataaaccc
aacttgttcaaccacaggtgtgttcctggtggtctttggctggagggcactgaca
>MER94   MER94 repetitive element - a consensus.
tagggtgaccatataatttatcgtccaaaccgggacacttttgagagtgaaagggggcgctattaataat
tacgccaggacaacaggyataaaccaggactgtcccaggcaaaccgggacatatggtcacccta
>MLT2C2   Interspersed repeat MLT2C2 - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacaycagtct
agatgttgctgtgaaggtattttrtagatgtgattaacatttayagtcagttgactttaagtaaaggaga
ttaccctccataatgtgggtgggcctcatccaatcagttgaaggccttaagagcaaagactgaggtttcc
cgaggaagaagaaattctgcctcaagactgcaacgtggaaatcctgctgntttwccagcctccaagcctt
cggactcgaactgcaacatcarctcttscctgggtctccagcctgccggcctaccctgcagatttcggac
ttgccagcctccacaatcgcgtgagccaattccttaaaataaatctctctctacacacaccctattggtt
ctgtttctctggagaaccctgactaataca
>MER117   Putative non-autonomous DNA transposon.
cagggatggcaaataggtttcatctcatgtgycaactctgatcgattggtagtggctgcctggagtgctg
tgttgagaaggattctgaggctgyatctgggctcagtgggaaagagtgctgtgattgattagtgatgtct
gccatgggcacaggagggggaagtagcagcanatatgctatgtatttgccatccctg
>IAPEZI   An internal portion of a recent strain of IAP provirus.
[encoded data, 6461 characters]
taaaaggatagggggaga
>RLTR10C   Long terminal repeat of endogenous retrovirus.
tgtgggaagccacatgtgccgttgcagagtggcactgactactgctggccaccacgcataagtttggaca
aacaaccaatgtgtacatatgcagtaaagttttttgcaaagacactgcctggcccgggcatgataatgag
gttctgtaaggtactgagagagtataaccaatcagatgtgagacatgcaaatgaggtatgataatgaggt
tctgtgaggtactgagagagagtagccaatcagatgaggaacatgcaaatgaggcttagtgcataaccaa
tccgggtgtgagacacgcctctcctaggcctatataagcagcaccagttctgggctcggggtcttttcgc
ctctgcaatcaagctctcccaataaacgtgtgcagaaggatcctgttgcagcgtcgttcttgctggccaa
gtcgrgcgcgcaca
>B1F   B1F repetitive element - an old subfamily consensus.
gccaggcatagtggcacacacctgtaatcccagcacttaggaggctgaggcaggaggatctgctgtgagt
ttgaagccagcctgggctacatagtgagttccaggccagcctgggctacacagtgagaccctgtctcaaa
aaacaaaaaaa
>L2A   L2A (MIR2/LINE2) non-LTR retrotransposon - a consensus.
ccctccgcaagagtaaagagggagccccaaaactcacccctcccnnacccctcagcactcacagcctctc
caccactatctgccttgagaccaccgggactaatctcatcatgccctttatccctgtttatgtcagtcac
cacaagaagcccaagactcccaggtcatccctcaccccccacgcttgaatccccatnaggctctgtacat
ctccttttctgaccccatctcccatccctccccanctcctgaaacccttccactgngccctctggaactc
acggtcmatcatcagcaaaatcccccgtatcctcaacctcttctctgaacgttcccttcaccttcttgct
ctaacngaaacctggctctcccctgaggacactgcttcccctgcagccttctcaagtggtggccgttttc
tctcccacanccctcgtaccactgggcctggaggtggggtaggtgtcctccttgctcctcattgctgctt
ccagaccattctccctccctcctccctaaaacaccccagctttgaatctcatgtcatcagactacatcac
ccgctacccctccttgttgcagtcatctacngacctccgggtcactccccctcattccttgaagatttta
gctcctggctcactgtcactctctccaacactactcctgtcntaattcttggtgatttcaatatccacat
agatgatccttccaataccctggcctctcagttccttgacctcctctcctccaatgatcttgtcctccac
cctacctcagccactcactcccatggtcataccctagaccttgtcattaccaataactgcaacccctcca
taatctcaatttcaagcatcccactctctgaccaccacctcctatctttccagctcactccctctagtac
cctaactccaacaattcttcgaccccaccgggacctccaatccattgatcctaccaccttttcactgtcc
ctcacccccctnatgtcctcacttccctccttacccagcttaaattccatggtcaatcattataatcact
cccttgcatataccctcaactcccttgcccctctctcgcttcgtcntactcgcctggcaaaaccacaacc
ctggttaaatccaactctccgcctactccgcgcctgcacccgtgcagctgaacgtggctggagaaaaaca
cacaaccatgctgactggtctcgctttaaattcatgaccacgaacctcaagtgggcccttaatgctgccc
ggcaatcatactacatttccctagtccattcactctcccactctcctagatnactatttcacaccttctc
ctctctcctcaaacctccaacacctcctcccctatcctcactctcagctgatgaccttgcttcctatttc
actgagaaaatwgaagcaatcagaagagaacttccacanactcccaccaccacatctacccacctacctg
catctgtgcccacatactctgccttccttcctgttactacggatgaactgtccgtgctcctatctaaggc
caacccctccacttgtgcactagatcccatcccctctcgcctactcaaggacatcgctccagcaattctc
ccctctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatacaaacatgctg
ttatttctcccatctttaaaaaacaaaaattctcccttgaccccacttccccctccagctaccgccccat
ttctctgctcccctttacagcaaaactcctcaaaagagttgtctatactcgctgtctccaattcctctcc
tcccattctctcttaaacccactccaatcaggctttcgtccccaccactccaccgaaactgctcttgtca
aggtcaccaatgacctccatgttgctaaatccaatggtcaattctcagtcctcatcttacttgacctatc
agcagcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacacc
acactctcttggttttcctcctacctcactggccgctccttctcagtctcctttgctggttcctcctcat
ctccccgacctctnaacgttggagtgccccagggctcagtccttggacctcttctcttctctatctacac
tcactcccttggtgatctcatccagtctcatggctttaaataccatctatatgctgatgactcccaaatt
tatatctccagcccagacctctcccctgaactccagactcgtatatccaactgcctactcgacatctcca
cttggatgtctaataggcatctcaaacttaacatgtccaaaactgaactcctgatcttccccctcaaacc
tgctcctcccacagtcttccccatctcagttaatggcaactccatccttccagttgctcaggccaaaaac
cttggagtcatccttgactcctctctttctctcacaccccacatccaatccatcagcaaatcctgttggc
tctaccttcaaaatatatccagaatccgaccacttctcaccacctccactgccaccaccctggtccaagc
caccatcatctctcgcctggattactgcaatagcctcctaactggtctccctgcttccacccttgccccc
ctncagtctattctcaacacagcagccagagtgatccttttaaaacataagtcagatcatgtcactcctc
tgctcaaaaccctccagtggcttcccatctcactcagagtaaaagccaaagtccttacagtggcctacaa
ggccctacatgatctggtcccccgttacctctctgacctcatctcctaccactctccccctcgctcactc
cgctccagccacactggcctccttgctgttcctcgaacacgccaggcacgctcctgcctcagggcctttg
cacttgctgttccctctgcctggaacgctcttcccccagatatccacgtggctsgctccytcacctcmtt
caggtctcwgctcaaatgtcacctcctcagagaggccttccctgaccaccctatctaaaatwgcacaccc
tctcccccatcatgcccatctttcttaccccgctttatttttcttcatagcacttatcaccatctgacat
actatatwatttatttgtttgtttgtttattgtctcctccactagaatgtaagctccatgagggcaggga
ctttgtctgttttgttcactgctgtatccccagcgcctagmacagtgcctggcacatagtaggcgctcaa
taaatatttgttgaatgaatgaat
>L2B   3'-end of L2 (LINE2) repeat (subfamily b) - a consensus.
tcccccttgctcactctgctccagccacactggcctccttgctgttcctcaaacacgccaggctctttcc
cgcctctgggcctttgcacatgctgttcyctctgcctggaacgcccttccccwctccttcancctggcca
actcctactcgtccttcaggkctcagctcaratgtcacctcctccaggaagccttccctgacttcccagg
ccgagttaggtgccctcctctgggcccccccggtcctaccctgccactctgggttatmattgtctgtkng
cangtctgtctcccccactggactgtgagctccgcgagggcagggactgtgtctgtcttgttcaccactg
tatccccagcgcctagcacagtgcctggcacatagcaggcgctcagtaaatgtttgttgaatgaatgaa
>MER6   Nonautonomous DNA transposon.
cagcaggtcctcgaataacgtcgtttcgttcaacgtcgtttcgttataacgttgatgagaaaaaaaatcg
attcccggccggggccactgtctgtgtggagtttgcacgttctccccatgtctgcgtgggttttctccgg
gtactccggtttcctcccacatcccaaagatgtgcacgttaggttaattggcgtgtctamatggtcccag
tctgagtgagtgtgggtgtgtgtgtgagtgcgccctgcgatgggatggcgtcctgtccagggttggttcc
cgccttgcgccctgagctgccgggataggctccggccacccgcgaccctgaactggaataagcgggttgg
aaaatgaatgaatgaatgaatacaaattattgtaaaataaaaatttataaagtatacgataatcatacaa
atgcacgacaataaatgatgtggtacgaaagtgctcagcgagcccgccatatttgtgattgtttgttttt
gaactgcgtggtggtaggaggtgctccttacaattttcgctttgcaaacatttattccttgatttaaccc
accaccactacgaccgccgtcactcactgattcaccaaaaattgggtaaataattatcttacttgttttt
attaatctttcttaaatgtatgtatagctcacatttatttcaatgtttaatattagaagtgttttggtct
ttatttagaagtttggtgatgtttttgtgaccagaaatatgccgtaggaacttaactcttgtttatatca
attagcctatggtaaaattggtttcgttatacgtcgtttcgcttaaagtcgcagtttccaagaacctatc
gacgacgttaagtgaggacttactg
>MER49   internal sequence belongs to the MER4I group; MER4 subfamilty.
tgtaaactaaaaataaaatcttaagccccccgccgactgaacggaccccctcttggccaaggggacccca
gagaaaccttaaaaactgagttcccggccatgacgggatgggaggtcagacacgcctcattataccccct
cccttttgtggtttagacacaacaactgaccagcattaatgttaaaatagagatcataagactgacagaa
cggactctttgtggcaataagataccaaattataaacaggacctaaggccatgccaggcaagggttaagt
cacgcacccctacacttaaagaataaactatgttctaactgccacaaggtttttctttttctctaacagc
taaacaagcactggcctcgagataagcaatattaaaacaattgcagctcatccascaccagacgctgact
aactgaccccctgttccaccagccataactacagctttgattggacaagagactgatttcagtaactttc
tcctgataagagaccaccggccatggactggttctggccagtttacagaggctgtgcacttgcacgcctt
cgtgtcctgaaaasaccttttgacgtatagggcctaattgtaatacatttaaatgttaagtctccacccc
aaagtgaacatgggtcgtatgttacatgcatgtttgttcaatacgcatgcgtcaggaccaccttcatgaa
tattcatagctcctcctgtaacctgttgaatatgtatgcttagccaacccgttcagcataaagctcctgc
cccaacccctcctccttcgaagtgcctgtctctggtcttggccagaggctacgcttcccagcctgcggga
tggccaccttgcaggctgtaaccctttataagaaataaagtctcctttccaaatttatagatctcgtgat
ttttcagttgaca
>LTR9   Long terminal repeat of retrovirus-like element - a consensus.
tgatacaggagttaagaagaaatcacttaggcagatagtaagggtatgggagtcctcggtaaggcttttc
tttttaatgaaaagcagccccaaatcattttctaacaaagagcagcctgtaaagtcgagctgcagacata
gacaagcaagctgggagcttgcacgggtgaatgccggcaggaactagggactagacatgttcaagatggc
ggctccatcttcccttctctgccagccacgtgtacagtaaggagcagacaagatggcgccggccaagtgg
aaagcccatttgcataataagattagggtggggcgaccagccttccccgcgcgctatgtaaacgtcatac
ctgatcgaaccaatctgtgagccctacgtaaatcagacaccgcctcctcaagccggactataaaatccgg
cgcatccgccaccagccggtcctttccgctcggaagacccctctctctatagagagagctgtttctcttt
ctcttctcttctgcctattaaacctccgctcctaaactcctcgtgtgtgtccgtgtcctaaattttcctg
gcgcgngacgacgaaccccggggtatataccccagacaacgtagccgcttca
>MER34   a consensus.
tawtgaaggagatcagaatatgccaccccaaaatatgccactttggcataaggattattttgagctaaag
gcacttgagaaacagcagrtgcaagaagagcactctgaccttcctcttttcttcctgaaagcaggagata
aaactcccatgtgaaagacgttctctctataccaggaggaaggaaacattcttatcgtcagagacgggga
gtcgaggccgagggaaatctgtacgaacaaaccttgttaaactaacyctyatcttcctagtcacttctcc
acgatgaaccgccctagcccaaacccctttgtcttgtcacgttttcacaatttactactctttgtccaac
ctagtatawaagcgttcgactctaaccgcttctttgggtcttcatttccttatgagggctcccatgtaca
tgtaaaacatacttaaataaatttgtatgcttttctcctgttaatctgtcttatgtcagtttaattatcg
ggcccagccggaaactctaagagggtagaggwaaaatttttccttcyctnccatgg
>MER50   Primate MER50 repetitive element - a consensus.
tgttagagtaggtagctaggcagrcatgagcagggcaggagagggcnccccccacacacaccacgaatgt
cgggtgaccatcaggtgatggtcaggcggttgttaaactgtctctctaaaataataattggtcacagcca
gcgccagggaaargcagtctcctaatagatagaaaacacctgaarctggtgatcagcagcttcccgataa
gatctcaggagttgggcgagtgagctcaagcatgcgcactaagaggcaaaatgrcggagtttaaccggca
tatgaccttcctctaggaacactccaatggtaagggaaraatgcctcaartgagcatgtgcacaactcca
gtaaacacactgtgcatgcggcccytcccaagtgctggcaggccactgcgcacgcggacagcccacccca
aggaaaaatcaagggaggagraacgcaaaccccggaagcatgccgatgtataaaaccccaagtcaaaggt
caaaccgcgcacttggtctctcaagtcgcccgcttggccctcttccaagtgtacttcgcttcctttcgtt
cctgctctaaaactttttaataaacttycactcctgctctaaaacttgcctcggtctctttttctgcctt
atgcccctcagtcgaattctttcttctgaggaggcaagaattgaggttgctgcagacctgtacggattcg
ccgctggtaactcagataccttccaccggtaaca
>MER66A   internal sequence belongs to the MER4I-group; subfamily MER66A.
tgagataggaggtgggactcgactccggaggcggggcttgaactccagaccagattgaagactagctgaa
acagggccagggcaaaagcacctctccataagacacacccaccggtgccawgtgagtttaccattgccat
ggtaacagccagaagttactgcccctttccatggcaatgacccggaagttaccaccccttttctagaaat
ttctgaataacctgctccttaatttgcatgtagttaaaagtgggtataaatatgactgcagaactgcctc
tgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctctgctgctg
ctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctttcctgggc
gaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER66B   internal sequence belongs to the MER4I-group; subfamily MER66B.
tgaggtaggaggtgggactcgactccggaggcggggcttgaacaccagaccaaattgaagactagctgaa
acagggccagggcaaaagcagctttccataagacccacccaccggtgccawgtgagtttaccattgccat
ggcaacagccagaagttactgcccctttccatggcaatgacccgatgacccaaaagttaccacccctttt
ctagaaatttctgcataaaccgccccttaatttgcatgtagttaaaagtgggtataaatatgactgcaga
actgcctctgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctc
tgctgctgctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctt
tcctgggcgaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER70A   Primate MER70A putative LTR - a consensus.
tgcaggacagttctccgggtggccttggaccgacccagttctccccnctttctcgcttgtagttctcaag
aataactgtagaatgtgctgggaatgcaacatcctgagatagggaggaactggccggaacagcccgggct
ctgttccagtccctcctagaaacaggatgtccttcaacgctttagcccagcgagtcatgtngcccctgag
gtataaaacccagggcgggctgctttccggggtccctcagctgcggtgcaagtggggcacgcgcagncga
gactccatccgccctgggcagctttcctgagccttgggggaccggctcgcnatgaatcctaggcttctgt
tgtcccttgctgcctatctgtaagtaataaacccgcttcatgtaacttgttgcgtgtgtgngtgttctgt
ctcaccggactcagacaagttggtaaccagtgcacagtgaacctgcttcaca
>MER70B   Primate MER70B repetitive element - a consensus.
tgcaggacagttctccgggtggccttggaccgacccagttctccccnctttctcgcttgtagttctcaag
aataactgtagaatgtgctgggaatgcaacatcctgagatagggaggaactggccggaacagcccgggct
ctgttccagtccctcctagaaacaggatgtccttcaacgctttagcccagcgagtcatgtngcccctgag
gtataaaacccagggcgggctgctttccggggtccctcagctgcggtgcaagtggggcacgcgcagncga
gactccatccgccctgggcagctttcctgagccttgggggaccggctcgcnatgaatcctaggcttctgt
tgtcccttgctgcctatctgtaagtaataaacccgcttcatgtaacttgttggtgtgtgngtgttctgtc
tcaccggactcagacaagtagtaaaantgcagcccaagatgcagtgggctgaagtgtttcngacccctat
tcctggtggttggcatagtgatgatctttgctattctccacgcagtgggagtcctcccttgggattggta
attagtgaacctgcttca
>MER72   MER4I-group.
tgagaaataaaaataaaatcctaagccccccaactgactgaacagaccmcctcttggccaaggggacccc
agagaaaccttgaaagctgagttcctggccatgatgggatgggagggtcagacatgcctcgttatacccc
ccccttactaaccaccattaggctttcttccctaagggctaaacagaaaccagccctttcaaaagactcc
accactgatatcaaccaaccacctgatgctgcccctcccttttgcggtttcaacacaacaactgaccagc
aatgcattncnttcctgataagagaccaccgaccacggagtggttctggccagtctacagaggatgtaca
gtgagggttttcgtgtcctctgcttcaccttttgacatcagagggccaaaaactccaccctyggatcatg
ctaatgctgccagtttttttgwacatgggacccatgaagrggcatgaagctcaattgcacatgtgcatgt
ttctcctttcataaatattcatgactcctcctatagcttattgaatatgtatatttggccaccctgctca
gcataaattyctgttccctttttccctccctcgaagtgcctgtttctggcttctggccagaggctaygct
tcccagcctgtcagaatggccaccctgcaggctgcaaccctttatgagaaataaagctctcctttccaaa
tttatgaacctygtcattcttcagttgaca
>MER73   Long terminal repeat of retrovirus-like element - a consensus.
tgttgtgatttttattgttatggtttctttctaatttggtcttgaggtctctctcttgagagtggccata
agccaagatagccactctctaggagagccctgactggggggaaagttaggttcaggtgtgtgtgtcaggt
gagacacaatgaggaggtgaaaccaaaatgcatgaaacagaagaaatttattactcacaggtcccagaga
ggttaggggtgccgacgggaggccgacgggaagtctggaggcggcagggagctcaaccagtgggtgggga
gcaagagagaggggagagagcctgtgggactatgcctttattaaggtccatgggcattatcccttaggct
ttcccacgggggttgtggattggctagtttaaagaaaacacgcgcgaaggggggaacttatttacatgac
tctggtgttgaccattaggttttatcgtggtcagcagctgtgggatgtgttgggttttgggtcagtgaga
tgaggaacaagcgggctatatcgcaaacaaccacacggggaggggaagttttaactaggccaaaggtgac
ggggtacgactgggtttcaaacaacttatgtcaggcctaaaaatggatgccgaggcagcaactatattaa
acaaatttatgaca
>MER76   Primate MER76 repetitive element - a consensus.
tgaggagtccagctcctggcyaaaaacctacgtgtgatttttcaggcctgaccataggcaattacaaagg
ctttacctggcaggcctcatgggggaaagctgccctccccacaccagacttggtgcacagccagtgcatt
gcagtctctgaagggagttgcagtcaaggactcaggcccccctggccggccacgctcttacacatatctg
cattcctagcccaggcgcctccgttcggaggcctctttattcggggccttctgcagaggtcttcctcagg
cgcctctgccgagacctctttatgaggggtggaagcgggagccttgaagacatttntctccactctgact
cagtactcagtgcttttccactcctatcccttccctntcctcncctccatgacccacgggtccataaaac
tgcaggagccttttgttcagggctccctcaacagtgagatgacccccatgtctgtgccgatccacctgac
ccttgaccggtgccatttccatgnggaaaaatggaacatggggagtcggtactttctctggttttagcct
cttgcttatactatcgaagkaagtgattaaagatttgactgttactttcattttggcttgttgccttaat
cggctnctctgacacccggcagctcagctctctctccagctcagctgagctcctgaca
>MER81   MER81 ia a non-autonomous DNA transposon - a consensus.
tagggtgaccaactcgtcctggtttgcccgggactttcccggttttagcactgaaagtcccacgtcctgg
gaaacccctcagtcccgggcaaaccgggacggttggtcacccta
>MLT1G   (MLT1g subfamily) - a consensus.
tgtggcggattttaaaaatggccacaaattctttgacactcttcccatcgaggagtggggtccgtntcct
ctccccttgaatctgggtgggctctgtgactgcttcgaccaatagaatrcggtggaagtgatgctrtgtg
acttctgagsccaggtyataaaarrcattgcagcttcctgcttgctggaackctcacacttggagtcctg
agccaccacgtaagaagttcarctrccccgaggccaccatgctgtgaggaagcccaagctastccacana
gagaaaccgagccatcttgraagcggatcctccagccccagtyaagycttcagatgactgcagcyccggc
tggcgtcttgactgcgccgataccacgtgggacagagawgaactrcccagctaagcccagcccaaattgc
tgacctatagtattgrgaacgaataaatgrttattgttttaagccactaagttttggggtggtttgttac
gcagcartagataactgaaaca
>LTR16C   Primate LTR16C repetitive element - a consensus.
tgtagcagacgctgtcggtgtcctggctcatcaccccctcagccctcaacatttcnatgtacactggccc
gacttccaactgccagcacctgcanctctctgcctgagggctttctctggccgcgggagcccgctctgcc
cgcgcgcagggcaggccggaagtgccggggaattaatgcccctnggaagcagccctcaaccaatgacnga
tgggagttggtgtataaataccccagctccctcgcccctcgggtgggataactctgaggcatgtgttcta
cactgtctcccagagttccccagcgggattgagctccagttgcccacagtggtaactngcttgataacgc
accctttattggcttccttcccttccctgtctcacttccccactcccctaccagtgtttcctgggatcac
ctcccaaataaactacttgcactcgaatccttgtctcagggtctgcttctgggggaacccaaactaagac
a
>MER87   Long terminal repeat.
tgtaacagtggagggagacctagcatgactgactccatcttgcctctgacccccwgsggtawcatccttt
aggctaaaagcttctgcttaktcctgcacgtaggccaagctaactatgggaggaatttagtttatagttc
aactttaaaaaagatggtaacagtccctttcccaaactaacccccgaggagataaggaaagtatacacac
aaataacaatgttatgttaaagatttataggaacattgtgacctgacctaggacaaagaagttttgmcaa
ctcctcggactcttgctggcgcccagatgtctgtggtcatcggtcacctcctaaccccaataccccnctt
sttccccttcccctagcataaaaagaagcctaagattyatgctnatttgagatggttctttaggacgcta
gtctgccatcttctcggtttgctggctctccgaataaagtcactttccttgccacaacacctcgtctctt
gacttactggctgtcgwgcggtgagcagtaccagctttggattcagttaca
>MER74B   Primate MER74 repetitive element - a consensus.
tgttttcttagattctgtattcgtctatttggcatccgttcatcacagagncanttatattaaccatgtt
ttttattttctgtattcttgatgctttgacatcttggggccttgctgaccccggagagactgcccctccc
agggctagccaattcctagagatagcaaaggactcgcctgggagcgcgcctttcatatgcaaaccaacca
atccaaagcccatacccccaaccacctcctttatcgggctctcacactccaggccaatattccccctgcc
ctaaatcaccccagggccaggtaccaggcaactagagaccacccctgtaccccagagcccgccagaatta
ttcaaactagccaatcctaagcctgcttaccctgccttgcccgttccttcccgtggaaaccmcaataaag
gctctggcccacgttttcccgtcgctccttctgcctcctgaccgaccctggtgcttccccgtggggctct
gcgtggcgtggcgtgcccccttctcttgggaactgtgagaataacaaactatcttttcaatggcagtcgt
ctcctgatctgttggccttaccatacctsaataaaataaaatcccaggtacattttaaaaca
>MER88   Primate MER88  repetitive element - a consensus
tgtgttgtaaatgggggagtaagtcccccttgtggggtctttaaggatcactccaacatggccgtggaaa
ttatactcggagaggcacatgaaattaaaggatttattatactcacaggtcctagagagggaggcacggc
acgccacgcagggggccacatgggaggagcncccagggagcgggctcaaccaagcaggtggggggccgag
agagagagaacccncgggcaagtgcctttactgggggtcagggtggagnacacaagcaaaaggcgtgagg
ggatttcactggtgcgtttgaatgtcactaggtcacagtcaggggaaggcaagaaggggaacttgtggca
gggaccagccttatcacactggtgcacctggtcacctgggcggggtgctcacagcctgtttgtggggatg
ttgaggcatcaggaaaatatgaagttttaaaaatttacaataca
>MER54B   Primate MER54 repeat subfamily - a consensus.
tgttttgagagcccccagctaaattggggttccagtaccagagcggctagcaaccctgccctaacgggaa
atgaaggggagctggacgtgggtgtttacagtgtgcctttcacgggatacttcttttacctggcggacgg
cctaatgcctagttgtccgacccgtgaccagggggtccctcacacgggaaacttgtttatactggcagat
gcccttgtggctcttgtctgacccgtgtccagtttatgcctgcctgaccatcgctctggcgctgggagcc
cgaccttgtgttctccccggcgtcccggggaaaacccggcctggggcagcccctggttcttcagatggaa
ggcgcaaattcaatacaccaccacaataggaaacaagttcaaagatttttacttacagatcctgggcagg
gagggcgcaatgagtcgggagggcagtcctccgtccccgggtcacgcgaggcaggaatgaagagtcaggc
agagagaggacatggcaactagcagtatatataagggaatagggtgtgggtcactttaagttcgcgggca
aatgcctgaatggtccntttaaaggaagcggcgggaaagcggggagcccagtctgctaggcgggagagat
gcctctaagttcttatctctggccaccggcttgagccatttgggtgtggtgtagaactggaaactgtgtc
aagggtgactgagccctgcttctggtatgagaaagttaaacctgtattcaaaatggatgccgaggcaaca
taaaattataagaattcactaca
>MER67D   Primate MER67D repetitive element - a consensus.
tgaccaagacagccttaacgttcccctcagcttgactraactttagacaggtttcttcctgactataggc
ccctgacctcccttttcttagagcatttactttagaaaacttgcaattgtaaattctttctctgcccctt
tgagatgtaaatcttctacaacccaggaatgtctttctcaaggacctgggagccatccctttgaaatata
atcawggaaggacatagggtccctgtctcccagtctctgtggaagggtaggagcctaactttgataagna
gcaattwgcaaacacagatggcctaatcacattgaccaacctccccaccaacgtcctccagtacttttcc
actagctcaccccagcgcttaaaaatccacctgccttttgtttcagnggagttgagttcaanctctaacc
cctattncaatagtctctgtcctttattgcaatagtcttgaatgaagtcttccttgcctgtttaacannt
ttccggtgcaatttttcttttaca
>MER45B   Nonautonomous hAT-like DNA transposon.
cagggccggcttcatgggcgtgcgacctgtgcagtcgcacagggccccgcgctcagaagggccccgcgct
tggtttaatgctctgctgtcgccgtcttgaaattcttaataattttatctttgaacttgtgttttgtaag
tgaagtccgatgggacaatggagcatgcgcgtgagcagaggagatacgcgcaatatgcgtgtccgccgtt
ccttgccgccccatttgcatatagcgttcgcgatgccccatgagcacagaattccggtggacccacgatg
cgtgggagttcagcgagactcaaagcgagtacaaggtaagcgtgttacgtctacgactgagtaagcgggg
gcgctgacagccccgagaggccacgctttccgttcgaaccagaacttgcttcgaacgcagaaagaaggca
atggcattctaagaaacacgaacgaccaaggaaccctatcatatcctttcttactcgtgttacttccctg
tattagccaaccacttacgctgaaaatgatgacatagaaggaaagggaaagatagggcaacccatagttc
cttttcctttcagtccttccttactcatcagtaagccgaaggtagagagtgttggtagaatgtgcgcgta
tcaagaagtgaaataaaaacagttgagttagttttgtgcagcgtttccactgttctggtaagaacgaaat
acatatgcatgtacgagctacgaaatacgaattgtgtaatttcggtgattccgcatacgagttaaatgct
cttatatttgcatttaaaactggcattgcacaatataaagatgaatggtaaaattcatgctaataattta
aaattttaatttttctttacttagaatgacattaaatagcaaatataaaaacaccatgacaagtcgagag
agagaccgcggaagaaaggaaaaagctttatattttagtacctttaatggcacttttttcctgctttttg
aacaaggggccccacattttcattttgcactgggccccgcaaattatgtagccggccctg
>MER45C   Nonautonomous hAT-like DNA transposon.
cagggccggcttcatgggcgtgcgaccagtgcagtcacacagggccccgcgctcagaagggccccgcgct
tggggtttaatgctctgcggtcgccgtcttgaaattcttaataattttatctttgaatttgtgttttgta
agtgaagtccgatgggacaatggagcatgtgccgggggcttggagcctcggctcacgcgcggtcccgcct
cccgctgcctccccgcctccccgggatgggttctcggccgcccgctcccctgccccctggtgccccgggc
cccacctgccttctccctccncgcccctgcccagcgaccactgccgccctctgcccccagcaggggcctg
ggcacgggtgcggggagggtcagggttgggtgcacgcgccctgtggcatctcggggcggggcatggcggc
ggctgtccccgccctgggctggcagcgccacggcgcattcggcgggcgactcggcgggggcgagcctctc
gcccacccctgatccaggtaccgagcgcgtcctggcacggaggttgcaatacccttgggggtcgcccgtc
tgccgtgggttggggcagcgggcccgtgggaaggggagatgcctggctcgacttccccgcccctggccgg
ggcacggtgcgtcggcccagcggctggcgggagggggaacctggcagctggtgggcccatgngtgcgcac
ccccaagtcgcagggtgggnccccgggtacctgtgagggtctgcactcgccccgcgagtatccccgtgcc
cgagggagcgtgacattaaatagcaaataaaaaacaccatgacaggtcgagagagagaccgtggaagaaa
ggaaaaagctttatattttagtacctttaatggcacttttttcctgctttttgaacaaggggccccgcat
tttcattttgcactgggccccgcaaattatgtagccggccctg
>LTR28   Long terminal repeat of endogenous retrovirus - a consensus.
tgatagcgacaggaggcagmcaaatgcctaggcagataggggcgggtccccggtgaaaccccaccttcaa
gccaaagacagtttaaagcctgaaagccaagctacaagtcccggataaatcctcagaccggaktgagaac
ttstcttcctgtttggcgcgctttcctctgattgatccccacccttcacctattttacatatacccaccc
tttcctaattggytttttacactgtcttgcccaccttcgaatgttgyctttkttttaaccttttttgcat
actcacaaaccaatcagcacgcactmccccccatcctgtgcctataaaaaccccagactcagtcagtaga
ggagangacagcttgacttcatasttggnagaagrattgggagagagacaacctgacttcagggaagacg
acctgcccttcccgtcccctctccagctcccctctccactgagagccgctttcatcactcaataaaattc
tccgccttcaccatccttcaattgtcagcgtracctcattcttcttggacgccggacaagagctcgggac
ccaccgagtgcgggtacccaaaaaggctgtcacactggccctttgccctcgctggcggagggcagccgcc
ccacatgacagaagcagcggcggggctgagccagccchagagccaygggctggagtgaggcaaggggccg
actgagctgttaacacgcatccgtctgcagacggcagaactaaaagagctawttagcayactgtaacacc
ccctctggggcttcggggtcgcgggcayccytacctgggtgctgccgcattcccctccaggtgacatgcc
tggtctggccgcaggccctgcacagagcttgctcctgtgccggtgcccgaagcagccggccagatcccgc
actcgctcgctcgcgtgctccctcccgcaaggggytgagcgbggcgggctgagtagacggggcacccctg
ccatgagtccggtgaaggggycaagaaaaatcctgcatca
>LTR29   Long terminal repeat of retrovirus-like element - a consensus.
tgttggggctcagaaaccgataccccaaaatatggcgttttgacatgctgaactgaagaagcctcaaggt
ctctctgacctccccccataccccccaccgtctctcccaaaacactggataagttgttctctgaagttcc
cttatctgcctaaggtccagacccaccaaggagaacaattgttttttnttcccctccctgttatctcatt
atctattgcaggaaagaagaccaagaatgtaaccacacctgaacagacccttttncaagataatgactgt
ctccaaggatcatttaaattccaaagagaactatttacaagttaatctctgttccccggatccantcatt
ctccctagtaatcatttattgcccctcaatagaattcctcttctcccccttcccataacctgttttgcca
ggatccaagcccccattctttctgtaacctcaagatggtatataagcttctgnacctcattgggaggttg
ggtcttcattctgaaggctcccgtgtatacacgttaaataaatttgtatgccttttctcctattaatcaa
tctgccttntgtcagtgatttttcagcgaaccttcagggggccaagggccttggcccccaca
>LTR31   Putative LTR from MER4I-MER41I-MER57I-MER65I group.
tgcttgcttttggtcacttgctttgtgttatcgttnttattkttttcctttttccatgaagctgaaggcc
gcagtagctgaaggccttgccgctgaatgctgaaacttaaccttcactggctactttatagataacattc
ataggtcaccacggtaacggttgcttacagttgtttttcarggaactkgggccagctcctgtccagttca
aaccggttgagaccackaacccttcaactgggcctgcgcaagtgcccaagaggtggccttttgacgtcgg
agggccaaaaactccaccctcagatcacgctaacgccaccattttctgtacatgtgtcctatgaartgcc
atgaagcccgactacgcttgcgcagaatgaacctrttacttcatttttccccactgccaatcacctttcc
ccacaccttagaccaccccgcttctctaacccataaatatccctaagccttatcttcggggaggcggatt
tgagagctgttctcccgcctcctcgcttggcggccttgtgaataaatcttttctcttttgcaaaacccat
cgtcacagtgattgrcttactgcgcgcgggcagaacggacctggacctggccagtaaca
>MER92A   Primate MER92A repetitive element - a consensus
tgaccaagtgttcacagttgttcgcttcttaccctctncttcgccttgacagaactttagtcaggcttct
ctccttcctacaggcccctgaactttgcttgcccctaagcctgagcaagcactmaaatgcagaacgtgcc
ccccttakcagcttgtcctgagaatcggctgaccacagcgggacacatttcctgtcaaaccccaccnatc
atgttgtntgctcgntccccctcgcttgcccactgtcycctttctactggttctgcttaycyctccctat
aaaagaaaagcctttttctgtttgattttgagacgcttgcaagttcctgaggtcggagcgttctccctat
tgcaatagtctttttgaataaagtctctccttatctaagtccggatttgtttttatttgaca
>MER92B   Primate MER92B repetitive element - a consensus.
tgacaatgttgaactttacctgagccctgtgctcctggaaaacagtgawggttaagaaatccccccatcc
ttttgtgttccgggaaacggcttactgcaaagaaccatccttccccatatgacttagataagactcatgg
atgncccccttgtttacctatgacaaggccagacacagaccctccaaattcccattctttgcctcataaa
tgattagctgaactgtttgtccccactgatcaatckggacaaaatacctgytaactcgactngaccaaac
tttagttaagcttctctccttcctccaggmccctgaactttggaccaccctcagcctgagccagcatcan
aatgtagaacagcccctcctgagaataggctgrcctcaaggtaaracattctctgatctactctgatctc
gccaccctttcatcccactcccccacacctggttctttctagccttgtttactcctccctataaaagaaa
agccctttctgcctgaactttgagatgcttgcagatcttatggtcagagcgttctccctattgcaatagt
ccccytccccccmttgcaatagtccttttgaataaagtctctccttagctaagtccggatttgtttttat
ttgaca
>MLT1H   Mammalian long terminal repeat (MLT1H subfamily) - a consensus.
tgtggtagattgattgcaaaaatggccacaattmtccacccctccctgtatccatgccctttgcaatgtg
actttgcagctcctcccatcaagaggtggagtctatttccccaccccttgaatctgggctggccttgtga
cttgctttggccaatagaatgtggcagaagtgacggtgtgccagttctgagcctaggcctcaagaggcct
tgcacgcttctgctctctctcttggaaccctgccaccgccatgtgaacaagcccgggctagcctgctgga
ggatgagagaccacgtggagcagagccgagccgtcccagctgaggccatcctagacnggccagcccccag
ccaagatcagcagagccgcctactcaaccagcagctgaccacagatgcatgagggagcccagccgagacc
agaagaaccacccagctgagcccagcccaaattgccgacccgcagaatcgtgagctaaaataaatggttg
ttgttttaagccactaagttttggggtggtttgttacgcagcaatagctaactgataca
>LTR32   LTR from human endogenous retrovirus.
tgtcnataaccaagtgtatggtagacgcacctgacagcaataacttaagcataccctgagaatgaccctg
tatggcagatgcacctgaatgtgtgtttggagttctgagctaaggaatccgggagtggccaacccggaga
ttcattccttatctatgaggaacatctgagcccccggcccgtcccgtggaacgcaggccatacaggggat
cgaggccctttgttttgggttaaatgaaggttgccaggtggaggttgttagggggagggtgctaagtgaa
aatgctatataaactgcatgctttttrcaagcggttgcggttctcctgtccagcccaccaccactggact
gtcttccctgtatgtaagtccccaataaaccctatgtctcatttgctggctctgggtctcttcttcggcc
tcttgaacctggtgccatccctattggagtcaataggggtccggcacaaca
>L1M3C_5   Primate L1M3C_5 LINE1 repetitive element - a consensus.
gagtgatgtcagcaagatggcagaataggaggtctcagccctatccccccacagaaacaccgattttgac
gaatacmcacggatgagagtacctttgwgggagtccgggagtccagtggacaagttccagcacaccgttg
gagwaaaaaatctaagaatagatgcattgaagagggtaagaagaacagtttcactttacccacgtcaccc
ctcccccaaggtggcatagctcagtgccaagagagwctcctttggtccgcgatttctcccgcaggggaaa
gtgagagcatagtgagtgagcgtccggctcccccagccatgcgggacgctgcccaggaggcccacttttt
tctcaccccacccagaacactgaggkgatcggcatggctgagtggttgggagaggctgaaagcagggaag
agangmtggggactcacagcagccagggcatggaactcaacmaaaggccacagatcctactaactgcttc
gcggactccatcaggaagcccgcccacaagcttcwtgggatacgttgcctgcagacccccccagctggcc
cacgggcgcccccaacgctctgtatgcctcacccctggcttcggcatggctcccaagtgcactcctgtgg
acagcgagtgcaagcctctgcagatggcttacgagcacgcgcagacagccggcttgactctgcwgwattg
gaagaagstacacaaacttgagcatttcagggcaccgccctaggaaaaagaaacggaagcctctttgcac
tcggcctggctttgcaggattgagagaaganatacaatcttatctgcacctagcmtggctttgtgggatt
gagagaaggcatacaatcctaagacttacctcctcctcargagggaacaagaggwgtggagtgggyacat
cmatagaaaaggtctgagagagycccagaatccctagccaggctggttggtgaaggtctttctcttctga
agccagtcagtaaagactggaggaggtgactgtttcttcaaatgtgaagacagcaatgcaagactttaag
aaacatgaaaaatcaaggaaacatgacantaccaaaggaacataataattttccagtaaccgaccctaaa
gaaatggagatctacaaattgcctggcaaataattcaaaataatcgttttaaggaagctcagtgagctac
aagaaaacacagatagacaactcaacaaaatcaggaaaacaatacatgaacaaaatgagaagttcgacaa
agatatagaaatcgtaaaaaagaaccaaacagaaattctggagctgaagaatacaatgactgaacaaaaa
aatgcaatagagagcwtcaacagcagactcgatcaagcagaagaaagaatcagcgagctcaaagacaggt
catttgaaattatccagtcagaggatcaaaaaaaaaaaaaatgaaaaagagtgaagaaagcctgtgggat
ttatgggacaccatcaagagaaccaatatacgcatcatggaaatcccagaaggagaagagagagagaaag
gggcagaaagcttatttaaagaaataataactgaaaacttcccaaatctggggagagatatggacatcca
ggtacaagaagcaca
>L1MCA_5   Primate L1MCA_5 LINE1 repetitive element - a consensus.
gaaagaaatgaaggaaccattaaaaaaatataataaagacttctggtttccagttcagcatgtaaggagc
ttagaagtcgccactccatcctaacaacaagtaaaaagctgaacaaactgaaaaatcaacaactcttctt
agatccatcagagaagtgaggtcacagggcaaaccactgcccccaaaattggagagacagacaggtgaat
acagagaatcacaacttaccagagcagaaacccacaagcagaaaccttccacaggaaccagtgccagggt
aggaaaacctgaactgtaattgatraattgctggaggctcagtgtggacaagtctgagagtgagttaaaa
actccagggggacccagtcatagggggggccccccacacttttgtgagttttacctccaggagctctacc
aggttctcacagtgaatatcagagaaaaatccccttgtgcttcyngcagggggaggggaaaaggaaccat
tttgaaatatgccagagcattctgttcttcttaacaaggcctgccctcaggagaaactattttaccagag
cctaacctgctggggttttatcagagcctaactgacctgggggaagggaaatacccaactccagctccct
ctagccttccacatgggggaagggaaatacccaactccagcccactctagccatcctgtcccacctaaag
ggggagaaaaaaactgagaagcacttgtgaagttcacagtccagaggcacaggctcactaaaagactgag
acctaatcataggactatagaatgcttcccctccccccmccaacacacagccacacaccttaccaccaca
ttaactaaaggcctatttacagcagttccttttacccagtacatcatgtctagctttcaacaaaaaatta
caaggcatactaaaaggcaaaaanaaaaacaaaaaaaaacaaaaacacagtttgaagagacagagcaagc
atcagaaccagactcagatatggcagngatgttggaattatcagactaggaatttaaaacaactatgatt
aatatgctaagggctctaatggaaaaagtagacaacatgcaagaacagatgggtaatgtaagcagagaga
tggaaattctaagaaagaatcaaaaaaaatgcagagagatggaaattctaagaatcaaaaagaaatgcta
garatcaaaaacacttgtaacagaaatgaagaatgcctttgatgggctcattagtagactggacatggct
gaggaaagaatctctgagcttgaggatatgtcaatagaaacttccaaaactgaaaagcaaagagaaaaaa
gactgaaaaaaaaaagaacagaaatatccaagaactgtgggacaactacaaaaggtgtaacatatatnta
atgggaataccagaaggagaagaagaaagagagaaaggaacagaagaaatatttgaagcaataatgactg
agaatttccccaaattaatgtcagacaccaaaccacagatccaggaagctcagagaacaccaagcaggat
aaataccaaaaaaaaaaaacaaacaaaaactacacctaggcatatcatattcaaactacagaaaaamaaa
raaaaaattcaaagataaagaaaaaaatcttgaaagaagccagaggaaaaaacaccttacctatagagga
gcaaagataagaattacatctgacttctcctcagaaaccatgcaagcaagaagagagtggagtggagtga
aatatttaaagtgttgagagaaaaaaacnaaccaacctagaattctgtaccctgtaaaattatccttcaa
aagtgaaggagaaataaagactttctcagacaaaaattaaaaaaaaccccaccaacctagaattctgtac
cctgtgaaattatccttcaaaagtgaaggagaaataaagactttctcaaacaaaaattgagggaatttgt
tgccagtagacctgccttgcaagaaatgttaaaagaagttcttcagagagaaggaaaatgatataggtca
gaaacttagatctacataaagaaaggaagagcattagagaaggaataagtgaaggtaaaataaaaacttt
tatttttcttattcttaattgatctaacagataacagtttgttcaaaataataatagcaacaatgtattt
aattatgtatgcttatgtatatatgtgtgatatatatatatgcttatatatgcttatgtataagtgaaat
gaatgacagcaatgatacaagggataggagggaggaattaggattattttgttattataaggtacttgca
ctacctrtgaagtggtatagtgttatttgaaagtggacttggattagttgtaaatgtatattgcaaactc
tagggcaaccactaaaaaaagttaaaaaaaaaaaaagaagtataactgatatgctaagaaaggagagaaa
atggaatcatataaaatgctcaattaaaaccacaaaaggcagaaaaagagtggaagacaaaaataggaac
aaagaacaagggcaacaaatagaaaacagtaacaaatatggtagatattaatccaactatatcaataatc
actttaaatatcaatggtctaaatanaccaattaaaagacagagattgtcagagtgg
>L1MEA_5   Primate L1MEA_5 LINE1 repetitive element - a consensus.
cagacttccgattccggtaatggtggagtaagcccctaccggaccaaccctcccgcagaaaacaactata
aaacctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaacaaaagcaggcagaaactg
gaggggagtcgacacttggaagaagggagcwgcacggagtgagttcccatttctgtggcttttagcctga
gagcaggccgcagttggtgcggcgtacagatggctaaaacwtcagtagaaaacccgcggtctttctggcc
tggagaaccagagaantgaatctagggcaaccacagccactggaaagagtggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactcaaagcagcccagctaaagacaaaagatctgaactgagactggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagataactgcctactaaaacaaaagaaacaacac
tcattagagaaaaataacagaatccagaatctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmacataagaagaaacagraaaaatggaatncatccttaagagaaaagaaaatcaaatccg
accctgagatraaccagatgttggaattaacagacaaggattttaaagcarctattataactatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtaagtgaacttaaagatagatcaatagaagttatacaa
tgtgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgttcgacaatatca
aatggtcnaacatanatgtaattggaatcmcagaaggag
>MER89   Long terminal repeat from endogenous retrovirus.
tgagagactgaatatacaaacggacaatggccagaccatatatgaaaatagaactctgacccacaacctc
tgcagcaacctgcccaggaaaccaatccccttatctacaattacaacaaasaaggcagcctgctgtaagt
cagacttgcasaaagtcagattgctctctctagtaancagyccaggaagccaaacaacaacctctgcaac
aattggcccmaaatggccaggacttgatcaataactgmcagcttccctaatttttgtccctgcttccaac
ttaggaccaaccagagaaagcyaaatatgcwccccwaaccaatcacataggatgccctgcttctagttag
cccgcctmcagcttccccatgccaacaacctccaatcagggcatacctgaagtcttcccttttttccact
ataaagctttcccactcctctgcctgcctttgagtctctgccaaacgcaagtgatggtggctgactccct
tgctatagcaagctctgaataaatagcctttgcttgttctcatttggktggtcttcatttatttccaca
>CHESHIRE   Autonomous DNA transposon; hAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtactgcccgtaaact
aagaatggtttttacatttttaaatggttggaagaaaaatcaaaagaagartattttgtgacatgtgaaa
attatatgaaattcaaatttcagtgtccataaataaagttttattggaacacagccacgcccattcgttt
atatattgtctatggctgcttttgcgctacaacggcagagttgagtagttgcgacagagaccgtatggca
ytctcattgcctttgcactsctgtttctraactataaccagtgttttgagtgccatgcatattactgtac
tgtaacattttwttytattattaatgnatacycatcatgtcaaaacaagaaaagaagagaaaagtrgact
ttgaatgttrcacttttaaggcacaatggagtatggattattttgttatggcaaagcattttattatgca
atgacactatagctgtgctaaatacaatatacattgacattaccagactaagcactcatcacartattcc
caaatcacaggaaagcaatngtcagaaaaattagaaaatttaaaacagaatatctcatcacagcagaatt
tcttcacaaaawtaaaaaatnaaaatgaggctgnaaccaaagtaagtttctgagtggctcatttgttagc
caaggaaggaagtcatttaccaatngtnaattaattaaatcatgttgattgcagcaggcatagaaatgtg
tctagagaaaataaacttaaaactattagccttttgataagaagagttgcttaaagagttgaggacatca
ataatcaattaaaaaggcaaatgrttttgagtggttttccttggctcttgatgagttgacaggtgttact
gatactgctcagttgtttatttgaggagtcaatgctgagtttgaagtgctgaatagccttaatgaatagt
ctgtgtggaataattgcagacaagaatatttcaaaaagttgagaaaacactaattyagtacaacctgaag
gaagtggaatctgctaagatgtgttaaaactgatggtggtaaaantatgtgtggagcagaaaaaagctta
gttggacaaataaagctgtgaaaatgtaagntgtttaaagyctatggttatttattttattcatcagcaa
gtactttgtagaaaatatttgaatctatcatgtgatattgaaccagtagtgtcaacatttgctcttgtgg
acttaaccattgtcagttctntaaatttttgtcagaaatagaagctgaatatcctgacttgccctgctat
acagyagtttgatggcttagnagtgctaaagctttattgntattttttgagctynggactgagattgaaa
tttttctgaatgagaagaactrctctcaaactrtttatcaaacactgagtggctttggaaattagctttt
gctgcagatttgataatatttcttaataaattcaacctaaaattacaaggcaaaacagcacttatattga
aacttatactgttgtaaagtcatttcaatgrcaacaactattgtttgaatcacaagtaatgtcaagctgc
tttatatacttcccatgctatcaaaagttaaaacaaagaagtaagatctccattcccacacaatttgtag
cagatatattttccaaactcaaactacagttccagcagcattttttggaccttgatgcaagtgcaaagga
aatwtccatttaactgtgcaattgagaagcttcctacctaaccttcaattggaatgattaatctgcaagt
aatgacatgcaaatatcaagagaaaattctataaatgccttccaagcaatgaatatgctcaattnaaatc
atatgctcgtgattgatatcantatttggcaatacctatcctgcgttgaaaataaaacattttcaaacat
gaaatrtgttgcattacagattagcatttnaacagatgaacatttgcaatcrattttgatgatagggaac
actaactttgaaccccaattaagcaaaatgttatcccwaaaaagaattccattcttctcattagtagacc
tgtattacaaaaaattgtactcaattattattwttattatattttgaatttcatcaataaaaattgtgga
attttttctcttgttatataagtacctacataatatccttgattttgcctcttggcccgcaaagcctaaa
atatttactatctggccctttacagaaaaagtttgccgacccctg
>LTR34   MER4I-group; a consensus sequence.
tgtaaagaaaaataaaaaatctcaggacccccnnncyccntaaactccttatgcccggaggccgagtcat
tgcaacaccctcttccaaatgaatagctgttactagcatcatgcatcagccagatccccaaggaaaggta
aaaggcctcaggcatctgcaaaagactgcccccacagatcattcataagtaaattctttgctggcctccc
ataaacaaggacatgccaattgtaactttaggtctgcaacctaagtctagctcctaaaactaaagtctgt
tcgattccacactgataatgtcaattacaagcttatcttcccaggtgcagaacaaagacaaggtgagatc
agtcatttcctccacctacccagagacgtctgcataattgactcttcctttactccctttttctcttcaa
acattcaccttatcttatgtaaaatatagatttactgggcactaactaaagtctcacaggaatgtaarcc
atttgccttaccgcctacctgcccctcttcctacatgccttcccycactttaaggaaatgtataaatact
aaacctcctgaaaacctcttcagaaaaagcagccacagatgtgtctgtggctcgcgtttttcccggacat
gccctaaagctggcttaataaacctcgattgattgagacwtwtgcctcagtcactcattttggttgtca
>LTR36   Putative long terminal repeat of LTR-retrotransposon; MER4I-group.
tgtaaccaagtacccccatttttctaagaaaaagagaatgagttttattatttttttttctyttttctcc
tttttcccctgttccccacttcctacttagccctttagaaatgcaattataaccttttacctccccttca
ccagacactccctacagggcaagttcatctaactatgtgcttagaagctccagagcggaactctctccca
ccaggagattgcctcgagagataacagtcratttacaacccaaagtatgcccgctacgaaactctctccc
acctggagagttttggccacytttacaacctagttctgcccacgaaggcgccagcagtcaccagctcaac
cgcctggtagataaggcaccgaagcaagtcacgtagacccccacctgctgcttcctcccctgcatgccat
tcatgccaagcccccttttaaaagyscctgctttctgctccaaaagcgaagcggtacccttaaggcagga
agcctgtacttcttccccctaagctagctttggaataaaaagtcactttctttataccagacctcgctct
tgttaattggactctgcaagcggtgagcaactgaacctgcgtttcagttaca
>LTR37A   Primate LTR37A repetitive element - a consensus.
tgtagggaaaaattgtgcttcaatggaaaactatgcattgtctagagcacacccttccgggttatctgat
tctagctctgtcattgtctttgagctattttacaactctgtaarttgtagataactgatagcaatgcaaa
ataattcttgtctataganatgcaaataaattntgtccggtrgaggttcaattgacttccttcccccact
gtggaaaaagccagttttgcntcyatttgcaaattcatttcaatattcctgattncctataaatgtgtst
gttctttgaattctcctttgaaccggttrtaacatcttactggttccctcattaattaatgagttaaata
aaatctttaacacgtgttcattttatatytgtatgagagtcatgattttaccttttttgaaaattatcct
ttaaca
>LTR37B   Primate LTR37B repetitive element - a consensus.
tgttaaagaaaaattatccmaaacttggaaataaggcaaaaagatgacwgcatgtcctttcaatgtcata
ctggagcattgtctaataggctcactcaaggattatttaattatctaggggaatgtacctntgttgactt
tgctatttactatttgattagggcccagatactatgaagttacatgttaacttgtagatttctgtccagt
agaaaagataaccycaaaggttatagttttattgccctgtaggatattaaccagttttgtatctaactta
gcaatcttattccarcattcttctttactgaatgcctataaatacctagtttctcaaatgctctttgaac
cagttttaccatcttactggttccctcattaatgagttaaataaaatctttgacacgtgttcattctata
tttgtatgagagtcatgtttttaactttttgaaaattatactttgaca
>CHARLIE5   Primate CHARLIE5 repetitive element - a consensus.
ctgcgctgtccaatacggtagccactagccacatgtggctattgagcacttgaaatgtggctagtgcgac
tgaggaactgaattttnaattttatttaattttaaatttaaattttaaaatggaagcagtataaaatatt
tttccattaaacacaactttattgttttggtaggactacatttcactttaaccattgcatcgcataatat
agatattgctgtattgtagtgcacgtgtcgggcgcgtgcgttgtttctagtattacacgtaaacacatca
ctgatctagtcggtgtcgacggattgattcagtttaaatgatttttttctatgcancgatgtaacattgt
aatgtgtttatttgaatattttatgcagacagcacgagttacagtgatacctatgtaaatcataattggt
aattaaattgaaatacttattattttaattataatataattaaattatttttctagttaaaaataagtat
ggacaaattttnaaatttaaaatgaaggcatactactgatacagaattgagtggagatgcagaagctagt
actatgaccggaacagtaaagaaaaaaaaagagactggaagaaggtatgttacaaatttcacgatgaatg
gcaattgcaatttgctgcggcagagcaaaacgaaaaagctgtttgttgtgtaaaaaatnttaaagataat
aaagtgganaatattaagagacattttcagcaaatacatagtgaatttgataagaagttttctctcaaca
gtcaaaaaagaatcaatgaaattagtcgcctgaaatcagaattaaatgtccaacaaaaatttttaaataa
tttttaacaggatctgagcttgtaactttggccagctataaaatggcttggattcttgcacaaaaaagaa
aaccatttttagatggagagatggtaaaagaaattatttcagttatggaaattttgttagaaaattatga
ggaaaagactaaaaatgatattttacaaaaagtgaaagatcttcaattaagccaccaaacaattgcccgt
agaatacaagacctttctaacaatatcaaagatcaattgattcaaaatttgaaaaactgcaagtactttt
ctttagctttagatgagtcgtgtgatatgagagacactgcccaattaatactttgggtacattttgtctc
aaaggacttccaaatttacaaagaaatgttgtcaattcgtggcctaaaaaatcgaactcatggcatagat
tttttaaactcttttacatctgtcaaagaagaatttcagttagatatgaaaaaattagtttctatcacga
cggatggtgctccagctatgttaggtcaaaaatctggatttattggaattttaaaacaagagactgatgt
ttcccttattgcttcgttccactgtatgatacatactgaaaatatttgtgctcagttttctgaagcagac
tctatgaaaagcgtcatggatacagttgttaaaatcgttcagtatatacatgcaaatgctgtgaatcacc
gccagtttatggaactgttgaaagaaatagaagacaatgaatttaatgatcttgtgttctttgccaatgc
tcattggttgagtcgtggaagagttttacaaagatttactgtactgttaactccaattcaagattttctt
gaaacaaaaggaatgcttgccaaatattcaataatcaaagacaaaaaatggcaatgtgatttacgttttc
tcaccgatatcacactgcatatgaacaagctaaatttgaagctccaaggaaaggaaaagcttatttgtga
cctagctagacaggtacaagaatttatgttgaaattgaaacttttcataatacaaatcaataataatgat
tttacacatttttctaacatgaatcaatatgcagaagattttaattgtaatcgacagcattatgtaaatt
ggctgcaaaaactacaagaaaaatttgaagaacgctttgttgatattgataaatttagagttgcttttca
atttatgcaatacccttttgaattcaatgttaataatactgagttgacacaagagttagtgaatttactt
aacttggacagacgtagttttgaaactgatatgcttttgcttcaaagtcaaatcaattcttctaaaaaag
atgaaccagttttgtcaatgtggatacgaatattaaaggaaaatgattttttgatactcgattcagttat
tggaaaacttttaagtatgtttggaacaacttgggtatgtgaatctactttttcaactgtaaattttatg
aaatctaaatacagatcaagtatttccgatgaaaatttagcgtccgaattgagatgtgctgtaagtgtaa
aatacacaccggatttcgaagacttagtacgaaaaaaagaatgtaaaatatctcattaataatttttata
ttgattacatgttgaaatgataatattttggatatattgggttaaataaaatatattattaaaattaatt
tcacctgtttctttttactttttttaatgtggctactagaaaatttaaaattacatatgtggctcgcatt
atatttctattggacagcgctg
>TIGGER5   Primate TIGGER5 repetitive element.
cagatggttcccaacttacgatttttcaactttacgatggtgcgaaagcgatacgcattcagtagaaacc
gtacttcgaatttctgatcttttcccaggctrgcgatatgcggtacaatactctgtcgcgatgctgggca
gcgrcagtgarccgcagytcccagtcagccgcgcgatcacgagggtaaacaaccrrtaytctacagtgta
ytrtrtgactggcgtttcttggacattgtgtttcgcgcttttgcatcctgtcatgtctacagtatgctca
tctatgcctcctgcttctggtgagaagaagaggaaggcaattactcttgagatgaaactcaagataatcg
ccctgcatgaagacggcaagggattaatggccattgcacaagagttgggactttcacgatccatgatcct
caaccatcttaaagaataagaagtgaatcagtgaggcagtgaaatcgtcagcattagttaaatccactgt
cacgaagaaaagagcttggctgattgataatatcgaaaaattacttgtcatgtggatgtaagaccagata
tcgaagggcatactacttactgatgatgccagctagggcaagaagtgtttttgattacactaaaagagtg
aatgaatgtgtcgatgatcctattatacacaagtgtttatggcaagtcataggtgattccagtgcttcaa
aaggcatcataattttcttaatgtgaaggtcagcagagagtcagcaagcgctgatattgaatgtgtcaaa
gcttttaggaagagctgtacacgataattgtggataataaatatttcccaggacaaatattttatgtaaa
taaaatagggttgctctggaagcaacctgtcaagaacttaaggcattcagactgtgtattgctgcttttg
ggtggaaatgttgcagggttcaaattaaagcttttcctaatttacaactcagggaacccaagaacactca
agaatgtgagcaagcattcgcttcttatttattatcaccataacaagacaccctggaggacctcagcatt
gttcgaagactggcttttgaactgttttcttccacaggcaagagaatattgtaagcaaaaaacgacttca
ttcaagattcttctgatcttagacagtgctccagggcacccacagcatataggtgacatgcattcttatg
gaaagttatgagtttgctgccaaacacaaccacactcaactcatggaccaaggcacaatagctgcattca
aagcacactatgccaggcatttgctccggctgttgaagtgaatgaatctggctgaatgctcctagagttc
tggaaaagttttaacattctaaatgctatccagaatatcactggagcatggaaagaagtcacacagcaat
gcatgaatggcatttggaaaaaagttttgaagacatgtgaacacattcaaaggccttagcaaggttctgc
tgttgatgaaacagtaacaagatactagtgcttggagaatagctagaattgatgaagaggatatttatta
acttcttggcattgaatctgaagagctttccaatgaggagataatcaaactggaggaagaaagaagttga
gaaagaggaagaagttatacctgaggcaccaagaaagttaacggcaaagaaactggcagagatatttgcc
actatcagcagtgccattcagaagttagaagaaagggatgtcattattcacaggagctgacacacagtac
aggatgctcttgcttgctacagagaaatatataatgaaaaggagaacaaactgtatagtccaaacctgat
gtcttcctgaagaacactatgcctgctaaaccattaacaagtatcgatgccccagtgccttctcccagct
actctcaggcctcatcagaagagaaattaatgaccctgttgcagtagcatccccatcatccagcaattaa
ttttagttcaatgcttcaaacattcttcaggcccagtatgcattcacctgtgtatgttacttaattgtga
gtacccatacaaccatactgtttytyactttcagtacagtattcartaaattacatgagatattcaacac
tttattataaaataggctttgtgttagatgattttgcccaactgtaggctaatgtaagtgttctgagcat
gtttaaggtaggctaggctaagctatgatgttcggtaggttaggtgtattaaatgcattttcgacttaca
atattttcaacttacgatgggtttatcgggatgtaaccccatcgtaagtcgaggagcatctg
>LOOPER   Molecular fossils of autonomous DNA transposon - a consensus sequence.
ccttyagaayaycatcaggtcttgnannnnnttttatttttgagtttttahttgtaactatttdtaagga
tattttatgncntttattctttcaaagaacwrargaaanatgnctgaataaanctcantnnagctngtan
ttaannatagnntgaganatcttnatgancctattttttccattttgctatttyatcttnctaggaatta
tttcatcattactaatcaattatttctaactgtgctnwtataaaaagactaaaataataagaaaatggaa
gaatgataaaacctcctgggatgaaataaataaatcatcactatgacatcatccttcagttttcttactg
tgttgcccaaagtattgcattatctttcaagaaggtataaaagaagtctggagacaccatctttgtagtc
tttttttagctttcattgaacacagtcgagaattcagaatttttcattttctacccataatggcaaagag
aaaaaaattgacagaggaagacatttcacaattattagatgaatcagaagatgaatgcaaagagacagat
agcagcactctagactctaatgatgatggtgaaattgatcatataagtgaaatctcagactatgagtctt
cagatgacgatatcctagatgaattttctcaaactcaagaatcgacgagtgaacaatatatttctaagga
caaaaaggaaatatggtattctcatccagttagtcattcaacaggaaggacttcatcacgcaatattttg
cgacaagaacctggaccatcccattttgctaaaaggacatgtgacagtattctttcatcttttatgatgt
ttgtgcaccaaatttacttgatacagtttgtaagtggacaaatgctaaaggcaggtatgtttacaaaagg
taactggaaggaaatagatgaagagaaaaaaaaaatcattgaattgatcattctaattggtgtttataaa
tctaaaaatgaaaatgttttgcagttatggagcaaagaagatgtctctcttcaacaaaattatgagccct
caaaattttcaaaagtattacgttttgacgatgtaagtatggaagaaaagaccagaaataataataagct
agaacctattagagatgtatttgaaatctggaatcagtatttacaagatagatatgttccaggttcatgc
atgacagttgatgagcagttagttgcattcaaaggatattgcccatttcggatatatataccttcaaaac
caggaaaatacggaataaagaatggaattacaattttgggttataattcaaattaaaatttttaatgaag
tttttttacaattccttaattcttcttctgtaaattattcgtaaaatgacttaaaaataaaaaaataaaa
agagttcattggacccagatggtaaatggtgatgactgtttttccttggtgtaccgaggg
>MLT1I   Mammalian long terminal repeat (MLT1I subfamily) - a consensus.
tgtggtagtcattagtgctgttcaccaaatatttctagctctctnccttccgggcacatggtaggattgt
acttcctggcccccttgaagttaggtgtggccatgtgacttgctttggccaatgaaatgtgagcagaagt
gacgtgtgtcacttccgggcagaagctttaagagccagtgtgtgattcnccangttctctttccctctgc
cacggngaccagcaatgttccagatggnggctgctccgtcagcctgggtcccggagtgaggatgacatgg
agcagagccccagccgacccgcgatggacatgtagcatgagcaagaaataaacctttgttgttttaagcc
actgagatttgggggttgtttgttactgcagcataacctagcctatcctgactgataca
>LTR41   LTR from human endogenous retrovirus-like sequence.
tgtgccagttatcaatttattgcctctcagctccaaattcacccttattgcctgctctgtgaaaatggat
ctggaccctttaaatatttttcctttgccagctggcatgatgttaagctttgtcagtagagggcactgga
gagacattgcaggaggaaggggcttttcttcctggttcctgtgtgctgntgtgctwggcatgctcacttg
gcaggttcctgtagctcaggcytacagcttctccagtgcccagttcctgcagcgcacacagcttctctag
cacccggttcctgcagcatgtgcmccttctcaagcatgcagctctggcagtntaatcagcagtgtccagc
agcttcccccagcacccatcactcaggnggtttcacagtggggtgcctntggtgagatacctccctgtga
acagctttccctgacaccctagaggntggatttccnagaagttccacagggtrgatttccagcaagttct
gttagtgcagtaccacagtaacttctctgccatccagtaagccatagctgtgcctttgtccaacaagatc
tggatctcagccctggggggaaggttctctcctgggtgctctrtctcagccctaggggtagtggctgctc
cttatatctgctattcctatattctttagagttctctttacctcttastagttaattccctgttatagtt
aatatttatattaaacttttcctgttcaaattactgtgtggtttctstctcctgattggacccagacata
tag
>CHARLIE6   Primate CHARLIE6 repetitive element is a hAT-like DNA transposon.
caaagtttctcaatttgggtttctacggaacctagagttccgcgagatgtcgctagggctccacgagaaa
ttgtgattgaaaaaaacncagtttttgaacttcgcataccgcgtgatgctggtgctcgcagtgatgggca
gtgaccgagcagccccgttagcaatttcattaggggtctttcagccctgtatggcagtgtgcagtaggac
tgtgctcatttggttgagtccattctcagtttttgatgcaagataggggaggctactgataantggtgag
cgctgtattgcacagaggggaggacggtaggctgatgacgtcagcttctcccctccaattacctccccca
acctccccttatacgccaccgactgacttangggagcgaacaagctctaccggtgtaatagaaaatcgga
gggaanttttcattctaaagaaggnatttttacgtgccacgactcagctgcccccctgccgctttgctgt
tgttataaacgttgcaaaacgtggattatgtaggttagaagtgaattgtattgtgaagtttttgtatttt
tgtgattttcttatttattatgcccttctgttttatattttattagcgtttgtgttttataaacatgtct
ganagtccagtgtggcgatttttgaagatgaggtgtgagatggaagaggagnattctaggcctaggccta
tggacaattctgataaggttagtgatgaagaattacaatcttctgagtcatttcactgcactagtgcaac
aagggacacaaanaaagtctatctttacaatgaaagctacttatcaatgggttttacatgggctggtaat
ccaagctgtcctattccattgtgcatcgtctgtgncaaacaacttanaaatgcagcaatagctccagcaa
aattgaaaagacacttaactacaaatcacagccatttgacaagtaaaggtgctgattattttaaacggct
attggaatctcaaaacaaacgaagtaaagcttttgttnaaaaagtcacattcagtgaaaaggctcaggaa
gcaagttatttagtagcagaacttattgcccagaaaaggaaaagtcacacagttggtgagaacctaataa
tgccagcatgtaaaattatagtgagtaaaatgctaggacaagatgcagtacgagaaattgaaaaggttcc
actctcaaacagtataataagtcgacgtattgatgacatgtcacatgatgctgaagaggttttgtgtaat
aaactgaaaaacnacagcttctctatccaggttgatgagtcaacagatttcaccaatanatgtcatgctg
tagcatttgtaagatttgtaaataatggtgaaattcaagaaaacnttttctgctgcaaagagctgcccaa
aacaagcaaaggccaagatatatttaatgttttgtcttcatatctggaaacaaaaggtctgtcttggagg
aactgtgttggcatctgcactgatggtgccccatcaatagttggctccatgagagattttacctcttntn
naaaaaaagaaaatcctgatgttgtcatcacaacacactgctttcttcacagagaggtgctggtgtcaaa
aactcttggagatgaaatgaaagttctgaatgatgctacaaaaatggttaactttattaaacaaagacca
gttcactcgagaatgtttnaaaaantgnatgaaaacctggacaaacagcacataaatctcctgctacata
cagaaatccggtggcttagcagaggaagagttctcaacagggtgtttgagctgaaaggtgaattgnagga
gtactttcaagaaaatagtaggccagattttgctgagtgctttgaagatgaagaatggctgcagaaacta
gcctacttagcagacatttttcatcacatgaaccagttgaacaagtctctgcaaggccctggagaaaatg
ttttgacttcaagtgacaagattcttggatttaaaaggaaactgaatctttggaaaaatcatgttgcaaa
aggaaatcttgaaatgtttccacngctgcttgggcttgagagtgaggaaggatatcagcaagtctcaagt
cttattgaaaaccacctggaagaactgcagaacaaaactgaacggtattttccctccctttcaacacaag
tgtatgactgggtgagggatcctttctctgaatcttctgctcagcctgagaacttgactttgagagaaga
ggaagaactttgtgagctgcagtctgatcatacactcaagatgagatttactgntctgcccctagacaag
ttctggatttctgtgaaagaagagtatcctgccattcataggaaaacagtgaacattttgctgcggtttt
caacttcttacatgtgtgagcaacagttttcttatttaacaagcatcaagagcaaggacagaaatngtct
catctcagttgaaaatgaaatcnntgtgtgcttatctcaagtttgacccagaattgagtatctgtgcagc
aaaaaaactaagcacaggtttcacgtgaagaantaacatatttttatttttagnttcaaaaatagcattt
taatgcatatataggcctataaaaaagatcangaaaccaacgcatgtgtataatanttttgtaactgcta
ggcctatatttgagcctgatcatgtcactcagwaagaaaatgttttttcaaagtcttgtataaaattttg
tcttaggctatatttttattcacattgctttggcttacggttttagtagctttactattcaacattgtca
ataaattttcatgttgtaataacattaattaaaatcaatttacaacctttatttaaattaaatctactga
gcntanctttaaaaaattaaatcccattttggcttaagccagttatttaacagaaatttattatgtttgc
cttatgagtttttaaaatttatgaaaagaaagaaattaatttcaagaaaggtaagctaagcttantacct
tacttttttcaagaaaggttggctaaaaagtcatttttagttttaaanaaggaaaaagntactcttgcac
acaccatgtaccacataccatacctcattagcatcttgtatagtagaaatttgtgataagactttnaggc
ctacttggataaagttttaaaaatcaagtaggaaatttattaaaaaaaaaaaactgaagtttcctttacc
tacactactgacttgcattagagttgatatcctttgtggggaggggnaaccacacaaaaagagnaggcta
ataagttggccaaaataagcagatccacagaaaaaaatcattctctactcaaaanagcattgacaattat
tattggattattatatctacaacttactgntcacgctaatataccatgagctgtagatataacatnttta
tgcaggggttccctgagacctgaaaattatttcaagggttcctccagggtaaaaagattgagaaaggctg

>LTR39   Primate LTR39 repetitive element - a consensus.
tgagacggagcagggaccccctcttaggggcctgcngggcactccccccccaagcatggaaataaaggaa
aatcttgagttccttcaagggaaattccaggcacctagctagccctgagaagtaaatgagcaacttgata
agcaagaaggtaatagtagcttaaaacaatagccaaggaagttagagtcacgrgatgtttggttccccta
tagaaactaaagataacatcttaacatatgtccctgagttgtttttcagaaacccggacccccaccaaat
ggaaaatgccatccgctggcacgtagacctcagataagggggaactgaggactgaactctgaccaccgtt
ctttgttctaaatttcttcctgaggggcctggaggaagtcacgcccacgagccagagctaacattctttt
ctgctgaccccaaatttttagacaaagcttcgcttccttaaccaatcgcaaatcagaaaatctttgaatc
yacctatgacctgtaagcccccgcttcaagatatcccgccyttttaggccaaaaccaatgtrtaacctcc
atgtattgatttacgattttgcctgtaacttctgctttcctgaaatttacccctgcctttaaaaaccctt
acctgtaagccatcggggaggtcgggtcttaagcgtkagctgcccgattctccttgcttggcgccctgca
aataaacgccttmctttctcccgctgcaaaatctcggtgtsgatgtttggttttactgcgccgggcgagc
ggaccccagttcggttcggtaaca
>LTR40A   Primate LTR40a repetitive element - a consensus.
tgttgggagacaattctccatgggtctctcgcatttctgcacgtcttgtgagcagaggcactgactgcct
ttgttctggactatcttttcaaggatgtttgtatagcgaacagccttggaagatagagatagtgtctccc
tctggagcaaagggcaggtttgcttactagccttgnaarataaagataatgtctccctccggggcaaagg
gcaggcatgcttactgcccattataaaagattngggtttcctaagctcggggttcctcwsctgtracgca
aacccactgcgtgtgcagnantcatctggsccccttcgcatcgccctcgtgggacttgggggncaagggg
aactgacgcaaacatgatgctcatgctgcctgctgtgctgtgartaataaagtcctttgtctctgaccca
ggagtctcgtgtcttctgccagcatccatgaaactgtggcaggctaacttgttagcttgcaagtagggta
aaatctcagacccttcacagttcttgaca
>LTR40B   Primate LTR40B repetitive element - a consensus.
tgttgggagacaattctccatgggtctctcgcgtttctgcacgtcttgcgagcagagcactgactgcctt
tttttctggactatcttttcaaggatgtttgtatagcgaacaaccttggaagatagagataatgtctccc
tctggagcaaagggcaggcttgcttactgcccattataaaagattcgggttccctaagctcagggttcct
ctcctgtaacgcaacccactgcgtgcgcagcatccayctgggcctctycgcgtcgcccctgtgggamttg
gggggcaaggggaactgacgcaaatgctgatgctcwtgctgcctgctgtgctgtgagtaataaagtcctt
tgtctctgacccaggagtctcatgtcttctgccagcatccatgaaactgtggcaggctaacttgttagct
tgcaagtagggtaaaatctcagacccttcacagttcttgaca
>LTR44   Long terminal repeat of LTR-retroelement - a consensus.
tgataacctacargtcacatttggcaggcttccaaattaacccacctcagggaggtcttgtgattcatgg
ccacatcctgtccctgagtaaagaatcttgtgagttcctcaaattttatcgtgagttcctcaaattgttg
acgtactgattaatatgtaacctactgacattgaaaaggacactgatttgtttctgaatcataaagtttt
gctgatttatttntgaatcataaagttttactgattgttttacatatagacattttagcctgtatgttgc
aatctgtagccaatgattataacctctgtattgtaccctccaatraaaaaagacaactccgatatgagga
gttcccctcccttctcctaaactttcttataaaagccttccaacttgtaamagacttcggaacacwccca
actttgttggtgtgtcttcccaggtcaatcctcacatttggcttccaataaacctttatcaaattatttc
tgcctcaacagccttaatttcggtcgaca
>MER95   MER95 repetitive element - a consensus.
tgtttaagaaaataaaaatggaggccacagtttagatataccccaaggccaaccgcccatagccacgtaa
ccaaaatttaagtcatcctgatttccccaaaacgctagctctaatcataaacataacacaaaacgtaagc
tttacatccttgtcagcgtgattcagtgaaattaaaccaatcagctatagacaaatcagcttaaacagct
ctacttgccctaaaaagaatgttaatgtataacagccaatcacgaaaaaggtcaaaatacttcctccttt
atgctttataaactgtgctatgactgccgtragnngagcttcttaccactttcrgyttgargtctcccgg
ttcgcgarctgtwctttctctyattgtatgcacaataaactttaaaatttttcctaacttgatctgattt
tawttttgaca
>MER96   Primate MER96 repetitive element - a consensus.
cagggccgggactagggtgaggcaagtgaggcgcctagggcgcaaaatttaaggaggcactcactctcag
ggtcgtgcaagtgcagggtcggcatttgcacgaccctgagagtgagtgcctccttaaattttgcgcccta
ggcgcctcacttgcctcaccctagtcctggccctg
>LTR45   Putative LTR from retroposon related to the MER4I-group.
tgtaaccgcgggaccagcccaaactgggcctactctgttgataacaaaatgtcaagttaccttgtaggta
taacagagcccaaaactgcaagtcatgtagcccgggcatgtgcaatagaaaaagctttgacctctaacaa
cacccagaaccaatgattcctcccctcggaaccaagaagaccgggacatgaccggaacctgaatgccgga
actctttcagaagcaaaggggtccgttggcccggaagatctggggctaaaatctgcctcaacatacctta
ccgtaaatggtcaaatttgaagccctccaatcagaccctgccaagccaacattcctaaatcctttccctt
gccctctgatcccttaaaacttgccccagaccccaaatcggggagacagatttgagcccacctcctgtct
ccttgctggccggttttgcaataaagcctttcttttctcaaaagctggtgccatagttattggcttctgt
gtgcatcaggcagcaagcccatttgctcgataaca
>MER99   MER99 repetitive element - a consensus.
cagtgtttccaaactcctgacagatnttaatcttcgggatttaggaacgagaaatcagaattcctgggaa
ttctcaggaatttccnaaatcataagttattcttaaantacttccaacattcttcanactncttactcat
tatcatggatatctaaaatttgtttcnttaaaaagaaatattnagtttagtagtatttacaaagaactgt
agcctatagtaaatattcaaacactggaaaatgccagcgaacattattgggtagtattcgaataacgtaa
cattcggatctcctagcaaggttaacggcactacacagaatcacatgtcgaaattgccaatttaaggact
tattttgcttccaaaacttgttatttcttggaacaccactcataggatttgtataaagtatactatgcat
ataaacntattaatatttattttatttgcaagaatgactcaccgttagcagcagacagggccatgaacac
acacttataacatggcaacagctacaagcaaggctgactgattagatcgtgaccacttctctcctatgtg
ctcctgtcccggttcctagaaatgtcgaccttaaccttcgactccacgtgtcagcgtttcctgctcttgc
tttcaacttgatgtcagtggattccttcgaatcagtaatgtctctatgttgattgttaagctttaattct
cgcaggagaattataacattttttcccattttcccgatttctcgactgatttttcttgggattcgggatt
tagaaaaacatacatttcccgagaaatgctgggaaggaattcccgcatggaaacactg
>MER96B   Primate MER96B repetitive element - a consensus.
aggancagggtgagrcaagtgaggcactcgccttgggtacaaaatttaagggggtgccaaaaaactcagt
aatcaagataaataatattttaatgcaatattttttttaaaatcaaaattaatgaaaaaatccatgacaa
aatgtcaaaatkttaaataaagatatkatcagtatgactgatntttcattttgcctcaggctccagtatg
agtngacactgcacagttrctgatcctgtatttaaaattttgatattttgttcatcatggatttttttgc
attnattttgatttttnaaantattacattaaatactatgtanctwtwtwatryattcagatattattta
tcttgattnctgartgttttggtacctycttaaattttgcgccygaggnragtgcctcnctcgcctcacc
ctagttctggntct
>MLT1K   Mammalian long terminal repeat (MLT1K subfamily) - a consensus.
tgtggncagctgttgtttctgcctgcccagcgtccattcccccttcttctggtaacagcaccccaacntc
ccttagggaaccacccttcccccactctcagtccatgtggttcgggtggggctgaccccncccctagctc
caggggtgggcacgtgacccaggcctggccaatcagagcattccatccccctggccacagtgattggttc
agggatgggcacgtgacccaagctgggccaatgagagtcagccctgggacttttgctggaactatnggga
aagagangttctctttctgctggggttgctaagctggnaggatgtaagcctggagctgctggnggccatc
ttgccaccacgnggagagagcctgcctgagaatgaagccaacacagaggaaagcagagccaagagatgga
gagagacagattcctgatgacatcgtttgagcacctggatccagccatgcctgaagccagctacccctgg
acttttcagttacgtgaaccaataaattcccttttttgcttaagccagtttgagttgggtttctgtcact
tgcaaccaaaagagtcctgactaataca
>LTR48   Long terminal repeat of endogenous retrovirus - a consensus.
tgttggggctcagaaaataccccaaagtatggtgctttggcatgctgagtactttgaactaaaggaaatt
ggaaggccttagaagcagccntcagaaccaaggtctntctctgaccttctcttgcctccctgtctctctg
cccctctttctttccccaagcacagggagggnctctctctgaaatttccttatctgactaaggaaacttc
tttccaaaagaaatgcaattgtcttgaatccccntccctaggaatctcatcaaataaccaggaaagatta
accacatgagaagagaagagactaaaagtcatcaaacccasaacaccacacccagacagacttttcatca
tctattcttctgagggcagctctaagagattacctgagagactttttatctgcataataagacaaccttt
gttcacagtgcagttctgcccctcaccttcctataatttgttctccaccacctccnccagagcccagaga
aactttgtcccaggccattggtctgttctttgggcccattcatttcccctaaaaatcatttactacccct
ctaaaattgcctacatcccccccatttccctctcccctatgaagagggtatttaagcttcaaccatctgg
cccttctttgagtctcatatanattttgtatgactcccatgttcatatgcatgttaataaatttgtatgc
cttttctcctgttaatctgtctattgtcagttcatttcagcaaaccttcagaggggacagaggggaagct
ttcctttcncccctaca
>LTR48B   Long terminal repeat of endogenous retrovirus - a consensus.
tggggctcagaaaataataccccaaaatatggcactttgacatgctgaactgaagaagcagcctcaaggt
ctctctgacctcccccccccctcccnnctcccgtctctcaatcctctgtctctcccaaagcacaggatga
agctgttctctgaagttcccttatctacctagaaactggacctgccaaagaagaacacaattgccttcaa
tcccttccctgaaatttcattaactagagaagattaaaactcatatcacaganaaaaaaagactgaaaat
taaacaccacacctagagcccagacaaactttgtcacaaaccattgtctgttctctggtcccattcaatt
tccaaagagaattatttacaagcyattgtctgttctctgggcccattcatttcccccctaaaaatcattt
actacccctcaaaaaattggcctacaawtttgcctacatttcccccatctccccttcccctatgaagaag
ggtatataagcatctgtaccccattgggttattgggtaatcattctcctctgtgattcccccatgctatg
cacgttaaaataaatttgtatgcccttttctcctattaatctgccttttgtcagttgattttcagtgaac
cttcagagggcaaaggggaagttttcccttggcccctacaagggca
>LTR50   Putative long terminal repeat of an endogenous virus - a consensus.
tgtgccagttattaagctattgtctctcagctccaaacccacccttctatactctgctctgtgatgctgg
ggctgggactcgactctgcaaaccacatttctgctttgccagctggctctccctgttaggctctgccaat
agggggcgctagagggagactgcaaggggctggaggggaggaagaagggacttgctccttcctgtctgct
gctgtttcctgtctgcttcctgttcctgtcagcatcaccccagcaatgcttcttcaccctggcagcagtt
gcttccagttgattccagcagcagcagttgattccagtttgcrsagttccagtttccaacantttytccc
aacactcccagaaccagcctcattgtaccccctcctcctcctcagagacaccagcaccagctgggcagtg
ccccctcctcagaggtctgagtcccagctccatggggcccctcctctgagctcagagacaccagcaccag
ctaggcagtgccccctcctcagaggtctgagktcccagctccatggggcccctcctctaagcttctaagt
tttaataattccaacctcttcccttttgttcccccagccctagggggtggtggtagctgcttcctgcagt
tactacctctgtgataccttagtgttctctttttgccttttcagttctctaatamacaactttataccta
gttaacctaagttaacaattctttatattaaattctctctgttaaaataactggtgtggtttctgtcttc
tcctgactggaccctgactgataca
>LTR52   Long terminal repeat - a consensus. 
tgtaataaagagtctgactccattttttgatgtttgactgctgacagcttttaagcctcacccctccctc
ttccctttgccccacatctgggcaagctgataagaaagcccaggtgctccctcctttggtactagcagga
aattcaaaccatacaagcccctgcctgcgggaaccctcaccccagccccacccccctaaccacaataaaa
accccaagccagtctcctttccctgctctctcaagacatttttggacctgcttgggaggcctgccctgct
ctccccagaaagcctcaattatgtaagtaataaaccttttcataccctcttggtgtgtgtgtggcatcat
cagtcttaacatccaaaccaaattttgggtgggggagtccatcctgcctctgcagagtgaccayaacaac
a
>MER105   Non-autonomous DNA transposon - a consensus.
cagcctttctcaactagggttctatgagagaattaagccctaatgccctaaggcatccattgtatgtaat
gaattaacttctctcctatgcatcctagaatggtactagttatataccatccttgggagaattgagaaaa
tagtcactcaaatcattttctgtgttctgtggttcagatgaggaaccctggttgagaaaggctg
>LTR53   Long terminal repeat - a consensus. 
tgtggtgtaaggcctaaaattaaggcccaatattatgtgctgccttgacatctggtgaaatcaggagggc
ctcaaatggcctaactacaagttcccctccccactctgctcccatggataaggtcccctagccaaacaac
cctccttatcaaggggaccaggcacagttcctgcttatccctgntgagtagygggtttcagttccctgcc
agcccgtggaattattcaaayaagccaatcacatcctcctgcgggaaccaggggtcacctcaccctcttg
atactacaaagcctgcctcccacagcccctggttgttcactctgttcctgagtgcaacccccatgtggcc
ctgtgtggnatgtggtgtcctcctcccccaggctgtgagtatatgtgattaataaactgctgtcaatctc
atctgtccagtgttgggtgtcatgtgtttarccatccccataaccctagggtgggaatccctccctcacc
aatggggtgaagaggaggcaatwaaaaca
>MLT1L   Mammalian long terminal repeat (MLT1L subfamily) - a consensus.
tgtggcagacacngttggttgcctacccaatagccattctcccttcttccttgctaacagaaccctgatt
ttgttcaggtatcaggcagccatgtgctttaggggaggctggccctctcctcagccccagagggtgaatc
ttgattggtctaagccaatcatggtaatcccattccccttgccagtgattggtttaggaatgggcatgtg
acacaattctggccaatgagacatgaggggaagtctgctgggagggcttctgggaaaggttttcttctct
nattaaaaaacntaaagagaaaacatgtcctcttttcttgctcctgctttggacgttgttgtgtgaggat
gtgatgcttggagctgcggcagccatcttgcaaccatgaggggacmagcctgagangaaaagccaacacg
ctgaggatggcagagcggaaagatggaaagaacctgggtccttgatgatatcgttgagccgctgaattaa
ccaaccctggaaccgccctacctccggacttcttgttatgtgagataataaattttccttattgtttaag
ccacttttagttgggttttctgttwcttgcagccaaaagcatcctaactgacaca
>LTR55   Putative long terminal repeat - a consensus. 
tgttatataaatgagccaaagatggcctctgtgtattggcccctaggttgtttatttcttcactgcaggc
tgagacctgttagctcaaaagcccaccggcaccaaactcaaatttttacacatccawattgttttaaaaa
tagcccaaacaagcagatttttagccatttagagcctgcctgctttgcataccccgcgaaacytcaccca
acatctgctagccattgcacttataagrccccaargcgctgctgcyctttggagctctctgacccagaga
ctcccyaaccgtgctgctgagaaacatcacttagacacataagccccctctccgattcccctctcccccg
ggagttcccttgccctcctccccttctggatggtggtcccastccctaaacctctrgacagtctcwtgct
gtgaggagcttccccttcatgcaaccctgtccaagtgccacccaataaagtttgttgtgtggtactgccc
ctgcgtggtcatatctttttccttgatcagcccccaaatcccttraacccccttcaca
>LTR58   MER4I-group; a consensus sequence.
tgagacagtatagggaagagactcagtcctggcagacaagagacatggtaaccaagatcccaatgggcct
cacatgtccaggcatattccctcccctaccttcttgcctcccttaacaagctgacccaagtcacgtagca
gaaagggggncctctcctaacttagctgaccaggctgaattcctaaccataaaaggaagaacctaaccat
ttatctccttgagtnatgtcttccaaggttgctgaagcaggactctggcattcctgataagaacctgacc
agatgcagccggctgaagacaagatggactccagcgctgacctttcaccaagtttttcttcattataatc
tcattgtaatactaaaatctccgcccarggtgggrnttatctgccahtttctrgacatgcgatgcatgtt
agagcatgacgtctcactgcgcaggcgctaaaaagaccccgcctaaacatgcttgcctacacgtcgctcc
tttttcctgcctcaacttccttaaaatgacaagagccgagcccttttgggagctagcatcaggatccctt
tcctgtacgctgctcccttgcgctgctcgagccgcaagcctattaaaccttgcctgagaaaatcggtttg
gcctggtgttaatttctacttacatgagagccaaggaacttggggtcca
>LTR59   MER4I-group; a consensus sequence.
tgagaaataaaaataaaattctaagcccccaactgactgaacagaccccctcttggccgagggaacccca
gagaaaccttggaagctgarttcacggccataacaggatgggagatcagacacgcctcattataycccct
ccctcgctaactaccattaggttttcttccctaagggctaaacagaaaccagccctttcaaaagtctcca
cactgataatgtccattactagcttatcttcccaggtacagaacaaagacaagatgagattaatcattcc
ttcacccctccccgagacatctgcttantttnttcctctattcccttttycttcaaatgttcaccttatc
ttatgtaaaatgtagatttactgggcactaactaaagtctcacaagtatgtaatcattcgtctcactgcc
acccccttttttaaggaaaatgtgtaaatactaaacctcctgagaacctctttggaaaaaacagccacag
atgcttctgtgacttacatttttcctrgrtgtgccctcaagctggctcagtaaacctcgatgntttgaga
cttatacctcaatcactcattttggttatcacyctca
>MLT1E1   LTR from retrotransposable MaLR element - a consensus.
tgtggtaggcagaattctaagatggcccccaagattcccaccccctggtgtacatgccctgtataatccc
ctccccttgagtgtgggcgggacctgtgaatatgatgggatwtcactcctgtgattaggttacattatat
ggcaaaggtgaagggattttgcagatgtaattaaggtccctaatcagttgactttgagttaatcaaaagg
gagattatcctgggtgggcctgacctaatcaggtgagccctttaaaagagggtctggaggtctttctgaa
gaagtcagagagattcgaagcagcagagatgctctcctgctggccttgaagaagcaagctgccatgttgt
ggagagggccatgtggcagggaatngcgggcggcctctaggagctgagggcctcagtcctacaaccacaa
ggaantgaattctgccaacaacctgagtgagcttggaagaggaccctgagcctccagatgagancgcagc
cccggccgacaccttgatttcagccttgtgagaccctgagcagaggacccagctaagccgtgcccggact
cctgacccacggaaactgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgtt
acgcagcaatagaaaactaataca
>MER109   Interspersed repeat - a consensus.
aaagactagatntttcanatyagaacttaannttgtccactatatacacagcantgttaaataaaatngc
acacacataacaatggttanaatctgaaatatcttctaaatatgaacattttggcctagaacctttcttt
tctcacttccttctctctgccttcaantcagtggacaagtatangcatgtgtaatgctctagagatggtt
taacaaatttatatccaaaagtcatttccagaagacaanccttnctatraantttaacaaaaagtktaca
aaaggtgctaattctactangtnctttgtcatacactggcagcctctttaacatctagagactagatgtt
gcaaaattaggactcatttgtccattatatacacnatatacaaagcaaaacaaaatgcacaanacataca
gaacaagagttcctgaaaatgtgcaattatnaacacactggcacadaaccnttcgcacttccttctctcc
canctcctctaaaccactgaataagcacagacantaatatacngctcaaagagatggtttaacaattcca
ttyccmaaagacagtntttcctrtgaattttanntaaaagtnacttaaagngtgttattttactacctct
acatttaacatacattangcacttcnraacatctagaaagactagatrtttcaaanaagnacttaatttg
tccactatatgtacagtagcattgaataaattgcacacatataacaatggttataatttgaaagtgtctt
ctaaatatgamcattctggcctaaaacccttcccatctccatcaacycagtggacaataatgctcaagtt
ttcagaagacantctttnctatganttttaangcaaaatgtacaaaattattagtttactaactctactt
ttgtcatacactggcaacctctttaacatctagaaagactagatgttgtaaaattaggacttgtttgtcc
tttatatacactatatacacagataagtaaaataaaatgcacagacataagagacaatggttaatcttgc
ctcactgtaaacacantgntggcataganctctttgcacttccttctcctgcctcctcccctgaaccagt
gcacaaacacaatgtgtaytactcaagaggtggtttggccattcccccaaagacaacatttcatatgaat
tttaacaaaaagatatttacaaaatgtattattttactacntctactttnaacatatatcaggcacttca
gaacatctagaaagactagatatttcaaaaaaatacttagcattgtcaacgatatatacagtagtgagga
ataaaatgcacacaaaacaatggttataatatgaaaatgtcttctaartatgaccagtctggnaaagaac
cttcttctcttcattctcacgccttctgctccatgkcctctaacccactgaatgaacgtggtsgtgtntg
ttgctcctggtgtcacttctagagctcgtctaacaatttcgtttcnaaaagtcatttccagaagacattt
rttttctankattttttaaaanaaaaaagggcatttacaagacgtgnnattttctaacttyttwacatat
agaagggctagatatagcaaanattttctwttaaaargttggggggnaagttgagagcagctttttcata
ttatatacncgggccttctataaacggtggccagtaaatcttcccaaagggtggtgggcatytccaatgc
gccaaatgtggcntgttattcyaccatttctctcttccmacatcaaggtctggtagaasgaaggccaacc
gcccgatggccngctaaccdttctacccgtcstygtccgggactcygctcaccttctaggccgtttaagg
cctttgtccrtcattnctggcatngtcaggactaggtamggtctcgdccaactgggacagagcggtcagc
ccgggncccgsrtytgygcrrctccrwggcmtaa
>MLT1G1   Mammalian long terminal repeat (MLT1G1 subfamily) - a consensus.
tgtggcagattgtattttccaaagatggccgcaacaatatctcccatcccacatgctcttcttacaatgt
gaccttgncactcctcccatcgagnggtggggtctatgtcccctccccttgaacctgggcggacctttgt
gactgccttgaccaatagagtatggcagaagtgatgctgtgtgacttccgaggctaggtcataaaaatgc
catgcacttccgccttgctctcttgggacgctcgctcttggaacccagccaccatgctgtgaggaagccc
aagcagcccatggagaggcccacatggagaggaaccgaggctcccggccaacagccccagctgagntccc
agccgacagccagcatcaactgccagncatgtgagtgagccagcctnnagatgactccagcccccagcca
ttgagtcacccccanccgtcgagccatcccagctgacgccgcgtggagcagagacgagccgtccccgccg
agccctgcccaaattgcagattcgtgagcaaaataaatgattgttgttgttttaagccactaagttttgg
ggtggtttgttacgcagcaatagataactggaaca
>L1MCC_5   Primate L1MCC_5 LINE1 repetitive element - a consensus.
aggaacttccactttcagttctacttccacttaggatgtagaaagccacaaragaatattgctcccatcc
taacaatragaaaaaaagccagataatctacaaaatyatacttttcttgagcccatcagagagctgaggt
cacaaggcaaccaagtaaactgaattccaaagagtgacaagcccctccaaggagaracaggacacaygaa
ctgtttcacctttggcagagcataggaggaagaggtggccaccataaaagcaggtaagaagaaatcagct
aaaattttaataaattcttaaaggccaagtgtgggctagtgtgwcagtttagaaagctgggagccccaga
cacaagggaagtttgcactcacttgcaagctcttttccatgggcctccaccaggtgctcatgagaaagac
tgggggcagggcaggagactgaagaaagccctcctcagkggcacaggcatgcaggaggtgatcggctgcn
gctgggggacaggaacgaagccnncctcatnttcncagaactttcttyccyaaagcaaaagccttnngct
rctgggntgasaggnagcaaacccnnttnctcccagggcckwrgcaaaracactmtwsyttytysrgaag
mggtargagcyaaaccwtctgattctgggggaagaacagaagcaaaagccttctscycnygngraagggc
agrraacwntntyaggyncaggatnntgcantgatacaaancagaggtcwgctactactgggagaggnac
aggtcccatcccaaccacagatacaaggagagtttgactgccatggagagaggggcaggaacactgagaa
agccccactcctgaggcccaggcgcacagggcctgcctaagactgaggctggaccaggacaacagagaac
atccctnctcccaccacaagcctaacaagcaccaagtaacamagcaacagcagtctaccactgggggagg
gnnannannatggagagagactccctctgtggcacaggtatgcagggactactgaaagctgagggtggag
caggaacactgagaaaaaccctctagcaaaccagcccccacactaagcacaaggtaacagcagcccacca
ctagaggaatttgaagcctgtggtgcactgarggtaaccatagcaacaacaaaacccaaacccagctcaa
ctcctgactagattgactcaacccccacactaaaagcctagcagaagaaaaggcatgcccatttccaggc
ataaatactatttacctcagtctctactgttcttctacacataatgtctrgcattcaataaaaaattaca
agacananaaaaaaagnaaaaaaaaacaacccattgtcaagagacaaagcaatcaacagaaccagactca
gatatgacacagatgttggaattatcagacaaagaatttaaaataactatgattaatatgttaaaggatc
taatggaaaaanggtagacaacatgcaagaacagatgggtaatttcagcagagagatggaaactat
>MER110   Putative long terminal repeat from endogenous retrovirus.
tgaaaactgaaaccaacataatttcctgtccctgdgttaaacaatactgggaccaggcatacttttctgt
tcctatgttaaacaatactgagaccaagcaaaaataacttagctacttgctccaggaaatacytgctcct
ggaagataagactgtgaaccaactaaaatagcttacttatcaagactaacagcttactcatcaaaactcg
tttcaagaccctcgcctcactgtgcccaccaatccaaagctattatgtcataaactctgcccaatcccaa
ccagttccccgccttgcaagacccaccttaaaatcacccagcccaggccctaaaaccctataaataatcc
tnccctaatttttccattttgagacactactaagactctgtatctatgtcaaggtgatgttcttccttac
tgcagtaagtctaataaaaactcagctttgcttgatcaacaggttttnttttctggtggtctttttgggg
agycgacagt
>LTR64   Putative LTR from human endogenous retrovirus - a consensus.
gtgagacaaagtaacaaatgtaagaagccatgtctgctcatttctgcttgccaacataatttcacaaagc
ccctgactctgtgatgacatgcagctctcnagaaagatgctttgaagacaaarcaggatrgagcacacag
ccccccayrtctcttgcctgagtcactayattccttaaaagataaatgaccctagtccttgccttttcct
acacagaagataatgtctgacagggttagtgattatgcctctgtaatctataaccagatgtactcttaca
cccaaactttgatgtgattctgctctaatgtaacttctgagcaagtttgatgtgattanttctngcaagt
ttgatgtgattttgcacgtactgaacctctaccacctgtatataagctgtgggctgaaacactgttttgg
agcagtctgacagaacctctctgaaagactgctcccaggctataggcntycctcagtctacagtcctcag
taagacttctgaataaaactaactttaattctttaaaagcttgatttttttntttctttagttaaca
>MER112   Interspersed repetitive element MER112.
tccagaccagtggctttcaaactttttttgactatgacccacagtaagaaatacattttacatnatgacc
cagtacacacatacatatatataactgaaacaaaagtttcataaaacaatacttacccttactatatgta
atgcactctgatattttctattctattctattctattttattttttttaaaaaaaaatgctggttataac
ccactaaattgatttcataacccactaatttttgggtcacracctgcagtttgaaaaacactgctctaga
a
>MER113   Interspersed repetitive element MER113.
tttcccaaacttcagtcattttcataccaccttcatgatttttgccatatctatataccacctgtactat
ttatttacttaatttttctttaaattgactcactttttttatttaaataaatttattttaaaaggaaact
ttatatcactaccataaatggaaaaccagtatcacttgccataaatagaaggtaaccataaaaataaatt
acaatgaaaacaaaacaatgttattaaattctagctagatactgttgcctgcctactgcaaggctctgag
cctgaggcctgctctctctttgttaaaaagagagattagcaagtgttagagaggtgttaaagacatacta
agcaccaaactgagactttctccttgatgtaatcagaaggattgaaagagaattgaaaagggaataactt
tctcactatgtgattcaatgttatttaatgccatatccatgtnctacctaaaatcatctttaaataccac
cagtggtacatatcccacactttgggaaa
>MER110A   Putative long terminal repeat from endogenous retrovirus.
tgagaactgaaaccatctaccacccacacagcttactgactgtctacattaacatgactttactattcca
ctgtcttcatcaacataactttactattccaggaaactcttgcccaggaagataaaagttgcaaataact
ttattgttcatttcaggaacttcctaaaaaacccatcaactcttcaatagaaagcatcaaacgacagttt
atccccaagactctttgaaacccttgcctcaaaaccctcaccttgctgtgtctgtgtccaccaatcctaa
actattatatcatgatccttacccaatcctaatcaagcccctacattgaaagacctgccttaaatcagac
tccaaaatctcaataaatatcctgactttgccctccctcctctgagacactactaagactctgtaaggtg
gtgctcycccttaccacagtaagcaataaactcagctttgtcttatca
>MLT1F1   MALR long terminal repeat (MLT1F1 subfamily) - a consensus.
tgtggtggttttaaaatatgtccacaaattctttgatactccttccttcaagaggtggagcctaattccc
ctccccttgagtgtgggctggacttagtgactcgcttctaatgaatagaatatggcggaagtgatggtgt
gtgacttccgagactaggtcataaaaggcattgtggcttcctccttgctctctctcttggatcactcgct
ctgggggaagccagctgccatgtcgtgaggacactcaagcagccctatggagaggcccacgtggcgagga
actgaggcctcctgccaacagccagcaaggaactgaggcctcctgccaacagccatgtgagtgagccatc
ttggaagcggatcctccagccccagtcaagccttcagatgactgcagccccggccgacatcttgactgca
acctcatgagagaccctgagccagaaccacccagctaagctgctcccgaattcctgacccacagaaactg
tgagataataaatgtttgttgttttaagccgctaagttttggggtaatttgttacgcagcaatagataac
taataca
>MER115   Non-autonomous hAT-like DNA transposon - a consensus.
cagtaccgcccttagacctgggcaagaggggcccctgccctgggccctgcgctttagagggctccgctct
ggccctcctccggcgcggcccttccccacggggcgaggagtccgcggggccaaggggacgtgcccacccg
gagcccatgcccccccttctagaccacgctccgggtacccgggaccccggaattccctgcccaaatggcc
ccgagcccgcttccagggcctgcgcgggcctcttccctgggtccgtcctcccaagggcggaccgcgccgc
cggtgtgtgcacccctaggcccgaggggtggccaaggggcggctgtttgcggggggtgtggacggagctt
ggacgtgcgggctggggtgtccacatgcgtgcacgcgaggcccctcgcggtgcaggacggagccgggggt
gggaagagaaggggagtaggccacgggccaggggctggctctccccaggccgccacgttctggcatggaa
ctccgaggagtccgagaattctaaattcgaacctggccttccaggtcgttatgaaggtatatttgtcaag
gtaggaggatagaacatattttatttaacagtttgttagcttgatttataacttttaaatatttagacat
atggtatgtgggcctccatttgtactcttgccccgggccccgcaaatgttaggggcgggcctg
>MER116   Non-autonomous DNA transposon - a consensus.
tattaggttgaaccatatgaaattgctaatattcgaccatttttgacctacaaaaatggcaatttcatat
ggttcaacctaata
>MER20B   Non-autonomous DNA transposon - a consensus.
cagtggttctcaactaggattgtattaccccctaggggacatttggcaatgtctggagacattttttggt
tgtcacaatgattgggggggrtgctactggcatttagtgggtagaggccagggatgctaaacatcctaca
agcantgcacaggacagtcccccacaacaaagaattgtcctgcatcccacatgactttcaaatgtcccac
tagacattcatgtaggtgaaaaaacctgtttataattatctgagcctagaacctaactctgttttacata
taaacacaaagtattttttgcatagttttaatatacactgaattttctaggaatgcaactacvattgtat
gtaaattgagggaagattgtactttgttttgtttagaactttaccaaagagttgttcaccattttggaaa
atcatatcactaatggncaatactcgctcatggtatttgagttgccaatacaacacacctgtatcagtct
gcatttgtagctgtcacattcacggtgattctatngtataggtgcaagcatctgactacttcattatgtc
ttctagtgtagtcatgcctgagcatttacatattgaaatacatattattttattataaattactttcctt
ttttctcttttatattacagttagagcattatattgattttttttaaaattaatgtgtataggtaggtta
tattatctatgaatttcatttcaggataaataaaagaggcattacaaaatatttgttataaaaaggggta
ttgggtctgatagggttgagaaccactg
>LTR65   Long terminal repeat - a consensus.
tgagaaagtaaaaatctgccctgccattcatcaggctgggataacagacacagataaagccagctgcaaa
gtataacaggaaacaatatttctcccaaggacatactgcagctgtaaagtgtcataacaancctccttct
ttgagtgactactgctttcttactcactgagaaaccttgttctctaaaatcatagactatcagaaacttt
gctgtttgaaattatatcagtaagaatgaaacatcccactcttgcctggaggatctaagtcactttgaca
cagagaagcagcctcaatttccaacccaggtgcagagcttcagataaggggtttctggacacaacattcc
acatttatcttaactttgtagtttccaaggaaacaggaccctgggtccactttgcagtccaggacctgat
gttgacccctttacacacagccctgctttgctttgagcctatcannntcaaaacactgcttcatttaaat
ttcacctaaactccacccttcccccaaatcctataataactctatcttttcctttgtttggtgagatgct
ccatggttcctctggtgtgcagtctccctcattgcaataagtcaataaacctgactttgttggactacag
gtttgtccctggtggtcttaggctgattgggctaggaca
>MLT1H1   Mammalian long terminal repeat (MLT1H1 subfamily) - a consensus.
tgtggtagattaaagatggccgcaaattwtttgccactcttcccattgagaggtggggtctatgtcccct
ccccttgaatctgggctggccttwgtgactgctttgaccaatagaatgcggcggaagtgacgctgtgnga
cttccgaggctaggccataagaagncttgcagcttccacctnggtctcttggaacactcgctctgggagc
cctgagccaccatgtaagaagtccgactaccctgaggccaccatgctggagaggccacgtgtaggcgctc
cagtcgacagtcccagctgagcccagccttccagccatccccaccaaggcgccagacatgtgagtgaagc
catcttggaccctccagaccagcccatctgccagctgaataccactgagtgacctcagtcaatgccacat
ggagcagaagaatcacccagctgagccctgcccgaattcctgacccacaaaatcgtgagatataataaaa
tggttgttgttttaagccactaagttttggggtagtttgttacgcagcaatagataaccggaaca
>MER101B   A subfamily of MER101, putative LTR - a consensus.
tgttaaagtatgcccctagctgacagacaaaatggactccctgtggctaamtgaggtgctcaaagttaaa
acagaaccaggcagccatggctgggtgagggagcagtcacatattctgtgttctcagaaagatgtaaaag
tntcacaggacctccctttctacaatcaagccaaaccagttcctattgtyagtgccaagataaactgcng
ccagaaaccacctccccacaagcccactagaaacaaacatctgacagagacttctgatttggggcttgga
aaccaaccaatcagagctcacctaccccagccaatcagggctcagctgtatcgaycaatcagaactyagc
tgnnccaaccaatcagaactaagcaagtttcaatccttcatttgcataaatgracctgattgggaacctg
ggcaggaagttttgctataaaacccaaancttcctttgttctccggaaagcaccttcattttacactraa
ggctgtgtctccctggtttgcaaactgttcactggaataaactctcctccaaattccttttnagagaact
tttgttcaca
>MER45R   Nonautonomous hAT-like DNA transposon - a consensus.
cagggccggcttcatgggcgtgcgacctgtgcagtcgcacagggccccgcgctcagaagggccccgcgct
tggtttaatgctctgctgtcgccgtcttgaaattcttaataattttatctttgaacttgtgttttgtaag
tgaagtccgatgggacaatggagcatgcgcgtgagcagaggagatacgccgggcagcagcgcccacggcc
tgtgggggctggcaggcagtgtgcatgccaccaagcagttggccgggccgcctggtgtgcacgacacgcc
ggggcagtccggggcacckcggggccccgagggggcaggccaggaccagtgnctacantggcggcggcag
caaaagcagcagcagaggtggcagcggctgcagccctgggagagangagggcctccatgcagggacagtg
angagacccgtcgtgggaggccagcttgtcctgtcaccggccatctgcgcaaatatcaactcnccggcct
gagtgctgggacaggaactgccggcgctcaggcagtaaactttgtcagtaaattattacaaaataaaagc
atacacatggacattgcaataaagcatatcagggagttgttagaattcttcaaagagtttagaatctccg
gttttgaaaactgctgcaacattgcaaagcaaatatccacaggcttagaaatagaaattaaatttaaaga
tcgtcgcattcgacggaaaagaacactattttcatgtgaagcttcggatgaaccaattattaatgaggaa
gacaattttaaaattaatttttccttataattgaagatacagcgatagaatgcataaacagacattttga
attatatacaaatcatgaagccactttcagtttcttgtacgacctccacaagttacaggaaatgtcagag
gaaacattaaaatgccattgtataaatttacatttaaaattaaattcagacttacacaaaactgatttgt
atgaagagttaaatctttttagaaaaattgttccacaagaatcatcagctctagatgtactaaaatttat
attttgaaataatttatcanaaatntatcctaatgttgtcatagccnataaaatactcttaacagctcca
gnaacagttgcatcagcagaaagatccttctcaaaattaaaaattataaaaaattatttgtgatcttgca
tttgccaagagcgantgacgtcgctttcaattatatcaattgaaaatgaagttgctaaaagtataaattt
tgatgacctaataaatgaatttncagaaaagngagccagaaaaatcttatgatcaatcaagatatcacat
taataaagtattattacttattgtattatataaaattatgacaccaaaatattattttttgcaatttgta
agtttatgttgttattcatgtatcactattacccctattacgttttataagtaataaaatattttagaag
gaaaagctttatattttagtacctttaatggcacttttttcctgctttttgaacaaggggccccgcattt
tcattttgcactgggccccgcaaattatgtagccggccctg
>MARNA   Human non-autonomous mariner-like element.
tgggcacgtatacgaggtgtgactataaagtaatgaggctgatttttaaacaaacacaccagaacttata
cgtccaaatgagtgttgtccttcaaagtagtcaccctgggaggctgtacactcgttccaacgatgctgcc
antgctcaaaacatttctggaactnctcttttggaattgccttcagagccagtttatgagccacataaga
aaatcagtctcattactttatagtcacacctcatttttgaccnaaaatagtattacccagcttgatcacc
caccttattcaccagacttggctctgaatgacttttggctgtttccaaaaatcaaatccaccctcaaagg
atgaagatttgccaccattgaggatattcaaaagaatgtgccgcaggctctgaaggcaattccaaagaga
agttccagaaatgttttgagcaatggcaacatcgttggaataagtgtatngcctcccaaggtgactactt
tgaaggggacaacactcatttggatgtataagttctggtatgtttgttwaaaaatcagtcncattacttt
atagtcacacctcgtntacgngccca
>MER119   Non-autonomous DNA transposon.
ccgcggttcccaaactgtgcgccgaggcgccccggggcgccgcagcgaactcacaggggcgccgcgggat
attttaaattttcgagggaaacacagcgatactcgacatctgtcggacaccgcgcgaactactagctcga
ggtagttcacagtttcaacattagatcgcgctacattcctttcgatgacgtcatatctttgcgaagctgg
gttttcggcggttgctgtgataaaaagcaagtaccgcgcgaaaatcaatgtggaacaggaaatgagggtg
gcagtgtccaatctgattccaaggtttgagaagttgtgcagtgcccaacaggcgcacacatcccattagt
aagtaattgtggttatttaagaatgaaataaaatattattttttctttcaatttatgtgtattatttttt
caaatggctactaagttgttaggacataaatacttattaagttgtttggacctaactacttaataaacgg
aactgttaggtatttcttttggcctaggggcgccgtgaaaaaattactgagacactaagggcgccgtgaa
ccgagaaagtttgggaacctctg
>LTR67   Long terminal repeat - a consensus.
tgtggacatttgtcattctttttggccactcagcatctgaacacccttcctatgtttggggaattccccg
cnttatgaatcccacctccccaaggtagaagccagaaactcactttcccagcctcccttgcagctagggc
gcnggcacgtgacctaggctccgccaatcagatgcgcccacncgagacttcgaatcagaagctagtgacg
caaggaagcaggnaccgcgtggaatccattctctggcgagagtggcagcagctggcatcnagtttccaga
ggcagcagtggcagagntcctagcggtggcgtccagcgctcatgtgtggtgcaagctgcggtatctgtgc
ccagcggtggcagcagtggtgtcctcactggaccagttctgcagtgtgatttgggcattgttcctggctg
cgtagcctccgagcctggttctccagccctcccggagattctgtgagctacccaatatcctttaataaat
tccttttctgcttaaatcagccagagttggtttctgttgcttgcaactaagaaccctgactgataca
>L1M3DE_5   L1M3DE_5 LINE1 repetitive element - a consensus.
cttggcncttaattcaccanctctgggagcagaggggattggacatatgagtctctctggaccacaggaa
aaaggnagtgttttatgcaagcaggcaagcacttccagaggcttcatcccccaggagcagtgcagagaag
gggctaaaaaatgcagctccctgtttctccctggaaggggtttatgacacactcttccagcggctacttg
gcggccnggcttctaactaacttgcatcggggagttaaagaggcaggtaantantaacctnccgncagcc
tgaaaagnaggtgggcactccccangccttcttccccggctcgctccagcgataantccaggcctatnaa
ttcctcctggaaggagtttgtccacacattgagcgccccaacttttacagcttccacccgagggactgna
tcctaaatctcctagctctgggagcagaggggactaggcatatgcgagtctccctagaccacagagaaaa
gtggcggttttanacgggcacgcgagcacttccaggggcttcatcccccnggagcagtgcagagaagggg
ctnaaaaaatgcagctcccngtttctccctggaaggggtttgtgccacgcatcgagcgccccaactttta
cagctnccacccgagggnctggctcctaaatcacctagctctgggagcaaagggactaggcatncncgag
tctccctagatcacagaacaaagaggtggttttaaacgggcgtgcgagcacttccagnggctacancccc
tnggatcagtgcagaaaagggcnagaacgcccagctcccantttctccccggaaggggtttgccgcacac
tcttccagcngctacctgagggcctggcttctaactagcctgcatctgggagctaacggggcagataaac
aagtagccctccggcagcctgagcgagagcttggcacttcctgngccttcccccccggctcgctccagng
ataaatccaggtctacagattctccctggaaggagtttgtccatgcaccgagcgccccaacttttacagc
tcccacccaagggactgnctcctnaatcacctagctctgggagttgacggggctctgcattcctgagtnn
ccctagaccacagagaacaaagaggtggntntacaacgggcncacttccagcagctatctccccaggatc
agagngtgcagcctgaacangagtacaggcatttgccacagatcctctccccggcttagtgcagagngag
tgggagataaacncccgcnctcagcttcnccntgagganagaaggaactggaacacacatccaacacccc
aacctttccagctgcatctnaagagnctggcttctatctcaccngtctcagggcactgacaggacntggc
acatcctaatctccngggggccaccaagaacaaagacagcagtctggacaagcacaaagatttgagaggc
accttagaatctctggccgggcngattggtgagatccntctcctacacgaggccagtctgacaagactgg
gagaggtggttgtcttatctaatgcgcagaaaccaacacagagagtcaaggaaaatgaagaaacagggaa
atatgttccaaataaaagaacaagataaatctccagaaaccgacccnagtgaagtggagatatgtgattt
acccgacagagaattcaaaataatggtcataaagatgctcaccgaggtcaggagagcaatgcaagaacaa
actgagaatttcaacaaagagatagaaaatattaaaaagtaccaaacagaaatcataganctgaagaata
ctataactgaactgaaaaattcaatagagggattcaacagcagactanatcaagcagaagaaaggatcag
cgaactcgaagacaggtcactggaaatcatccaatctgaggagcaaaaagaaaaaaaaatgaaaaagagt
gaagatagcttaagggacttntgggacaccatcaagcggaacaacntatgcattatcagcgtgccagaag
gagaagagaaaaaggagaaaaggnccagaaagcntattcgaagaaatagtgactgaaaacttcccaaatc
tggggaaagaaatggacatccagatncaagaagccca
>MER104A   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcgttattcctagcggcatgactgggcatgcaacctttcgcgtttcagttaacaaacc
atttaaggaccatttgaggaaggaatatgagtcctggttgttgtctgaaaaccttctgttganaccttct
ggtaagatcaagaaagcgccagcatcaaaacttgcagaatgggtgtcagcggcttggaagaaaatccaga
caatagtggagcactcttttaagaaatgctgcatcaccaacgctcttgangcacagaggacgatattgtg
tggaaaaacacggacatcgatgactctgagtcgaaaagtgattcagaagagttggactctgaatgtgaag
aagttttaggaataccttaaccaatttatttcgcttatattttcctttttatgtatgcacaagagtgata
tatgataaaaatctgtgtctaaataagtctaaaagagctctttcaataagtataaaataaaaattctaat
gataaggaaagcattgtgtcatagtttaattggcagcgttttttctttcttagtggtacataaaataatg
gtgcgtcttacaatcgatggcatcttagattcgatgaaatacgg
>LTR40C   Primate LTR40B repetitive element - a consensus.
tgttgggagacaatcctccatgggtcccttgcactcctacatgtcttgctgggtataccaagaatgcaag
accctgactgctctttacctcgggccatttctcagggttgtgtttgcagcaagcaaccttgagggatgag
gtaatgtctccctctgggacaaagagcaggcttgcttactgcttcctataaaagcagcagattctccaag
ctcagtgttcctcngctgtgacacaaacccactgtgtgagcagcatccatctgggccctttgtgtcaccc
ctrtgggacttgaggggccatggggaactggtgcaaacatgctgatgctcatgctgcttgctgtgycatg
agtaataaagtcctttgtctctgacccaggagtcttatgtcttctactagcattcatgaaacaataacag
gctaacttattaacttttaagtagggtaaaatcncagacctgaca
>MLT1G3   MLT1G3 subfamily - a consensus.
tgmcactcctccatcaagkggtagagtctatttccyctccccttgaatntgggytggnctttntgattgc
ctngaccaatagaatgcagtagaagtgatactgtctgacttcnaaggctawggtcataaaaaggccatgc
acttctaccttgctctcttgggangcttgctcttggaacccagccaccatgctgtgaggaagcccaagcc
acatggagaggccacatgtaggtgttctggccgacagtcccagctgaggtcccagccaacagccagcatc
aaccaccagacatgtgantgagtgaagaagcctccagatgattccagcccccagctgtcaagtcatcccc
agcctctnncagycmtccccagccttcaagtcttcccagctgaggccccagacatcatggagcagagaca
agccatccccactgtccmytgtgccctgtctgaattcctgacccacagaatccatgagcataataaaatg
gttgtttaagccactaagttttggggtggtttgttacaca
>LTR68   internal sequence belongs to the MER4I-group - a consensus.
tgatatgtaaataaaatttttccaggagccagatagccmcatgtgtctcagattttatgacctaragatg
tctccaaggtctgaggcttcattattctttgaaatgtaaataccyagagagatagctactccagtcttcc
tggcaccttgggaacttaacctagggacctagtccgggctgtaaccatttggccctctaggggagataag
aaagttttattatccttttggatcagagcaattaactagacaaatggctacagatctaattctcatggta
tgtgaagagtaaaatgcttctaggggaagtgaaagcaaacattccctatctttacgtcatatacatttcc
atgtctcaggaggctagggctttttacagaagcactgagaaatccagggaaattttatttccccaca
>L1MED_5   L1MED_5 LINE1 repetitive element - a consensus.
cggacttccgtttccggcaatatggtagactagataacctgaaaaccctcccactacaaaacacctagaa
atgctggataaaatataacaaacatccttttaaatgcatagctgagctcgcaagaaagtaagggaaatcc
ccaggggccaaaaacgaagagagaactgaaaaccagagcggtaagtacgtgagctgangctgtgggctgc
cctgagggcaatttgccggtctcggtaaccaaggggcttgggttttaacgnccatgcggggataggagac
aaggccttgggcctacgcaaggcggagagttggaactgagatccctgcataaagccgggacccttgaagg
gctacaccctcagtgaaagggtagactagaaaaataatctgcccaccggcacagggagatgaaaagaaac
tgtctctnngcctgggctctgggtggagaanaaaagtctcccctgagaatttataaccacaggcctgccc
tcacgtgggtttggggttcaaatttacactacctgcgtggtccaggaanccccaagccgagaaattaaca
taaagtggtcccaggttggtagtgnccctggggcacctggcagaagcaaacgcaaatcctctctggaggg
acgcaccctcaacccaggcctcacaggattcccacagataaagctcngctaaacatgagctcacaatcca
aaattacaaaacacacgaggaaacagtctaccatgagcgagagtcagcagacacaacaaatagcaggatt
agactcccaaggaacttcagatattggaattatcagatacagaatataaaataagtatgtttaaaatgtt
agtgaaataataggaatatgaaataaaaacatgagaaagnaataaggtactatcaaaanaaccaaatana
acttttggaaatgaaaaatatatagtcattaaaattaaaaacccagtggataggtnaaacagcagattag
anacagctgaagagagaattagtgaactggaagatagatctgaagaaattacccagaanatgcacagaga
gataaagagatggaaaatatgaaagagaggttaagagacatggaggatagaatgaaaagatccaatanac
gtctaatagganttccagaaggagagaatatgatggggaaaggcaatattnaaagagataatggctgaga
attttccagaattgatgaaganatgaaccntcagattcagaaagcacaatgaatcccaagcagaataaat
acaaaaaaatttacatctagacacataataatcaaactgtcaaaagtcaaagataaaaaaaagatcttaa
aagcagccagagagaaaagatagattacctaaaaaggagcaacaataagactaacagcagacttctcanc
agaaaccatacaagccagaagacagtggaatgaaatctttaaagtgctgaaagaaaataaaaaantatcc
tnctatcaatctagaattgtatatccagtgaaactaaccttcaaaaatgaaggagaaataaaaacttttt
cagacaagcaaaaanaanagctgagggaatttattaccaccagacctgcaagaaatnctaaaggaagtac
ttcag
>MER34B   Long terminal repeat of retrovirus-like element - a consensus.
tgtgggagaccagaatatgccaccccaaaatatgcctctttggcataaggaytgttgagctgaaggcaat
taagaagaagcagatgcaggaaagctctctgccctccctctatttgcctaaaagcaggacatagatttac
aaagacaaaaggtatcctgcccccaccccttctaccagggagaacaaaggttaaccactgaagacaactt
tagacccttattggcctggagatggtaccagaggaatctacattaacaagccttactaactagcctttat
ctgccagttatttgccttcccacaagttgctgcccctagagactcaaagtccttttcctttgtcttgtca
cttctctaaaaatttnttttactgttctttgttgaagatgctatataagctggaattcaaagccacctct
ttgagaactactcattctctgggtgtctcccatgtatatatgaaatatacatgttnaaaaataaanttaa
taaacttctgtctgtttttctcttgttaatctgtcttttgttacaggggtctattccaactaagaactta
tgagggttgaggagaaaaaattatttttcttcccctaca
>MER54A   Primate MER54 repetitive element - a consensus.
tgttgtattttcctctaatttggtcttgaggtctctctctggagagtggctataaactctagccctgccc
tgatggggctccaggggakgtggtcgtggatgtttacagtgtgcctttcacgggatacttctttatcctg
gcggacggcctaatgcctaagtgtccgacccgtgaccaggtgtccctctcacaggaaacttgtttatact
ggcagacgcccttgtggctcttgtctgacctgtgtccagtttattcctaccaagatagccactctctagg
agagccctgaccgggaggagagttaggttcgggtgtgtcggtcaggtgagacacagaggaggcaacacaa
caaaacacatgaaataacagaagcagtktattacttacagatcccagagagaagagggcagcacgcctcg
cagggccaacgggaaggggggagccgtccgggacacgcgtgctcaaccagcgggtggggagcgagagaga
gagagagagggacctgcgggccgaagcctttattggggtccagggcattacccaagcaggtttcccgcgg
ggagttctaattggtgggtttagagcaagcaggcacgagttccgtggggtcacgctgtgactgagaggtg
gtcactgcggcatatctgcgcagtccatgtggggtgtgggggtcagtggggcgagtcaagtaggttgtat
ctagctgtcccatagggaggtggtcaccaggaggcggttgtataaggcagatatctggatcgaccacatt
gaggaactgggaggaggcggagaactggaaactgtgtcaagggtgactaagccctgcttctggtatgaga
aagtcnaacctatattcaaaatggatgccgaggcaacataaaattataagaattcactaca
>MER74C   Primate MER74C repetitive element - a consensus
tgttttttaaaatgctgtcttgacccagttttgaggccctggctagaggccggtcagttccccttcttga
gcagctgattaagtccacaccccaaccacttcccttatcgggctctcacactccgggaccactatgcacc
cgccctaattgccccagggccaggtaccagacaactagggacagcccctatgccccggagcccgcgaaat
tattcaaattagccaatccacagggagcccgngaaacctagctaaccccaccccacttgccatacataag
ctgccccctacagctccagcttgctgttaccctgtccctgggtgcaactccctgtgtggccctgcctggc
agccttctctcgtttggagctgtaagtaacaaagagttctgcctttcatctatccgagtgtcantgtgtt
gtgtcccgccatcaaaagaatctttaaatcttataaaaca
>LTR75   Primate LTR75 repetitive element - a consensus
tgtaggggaacggctccgccatggcgccctggcgaccttgcacgtatccacataggccacgcaggcaaag
gcttgaaccgcagctaatctgagtcttggcagaacgccttgtgatcctcccggaacacgagaggatggga
ggcttgtgaggagctgctncaaggccatctcccactcgcctccctatctcccctgggaggctgtcatgag
acagtttctcatcgcctcccgggttctgatgaggtatggggctttctgcctcgcccccctcaggatagag
ctgcagantataaaaccgcttagctgcagtctagaattggctcctcagcaacggggtatcccacaactcg
cgttgcagtcatccggccccttttgtttcggtgtcgtcctttttggtgtgtgggacaaggaccgcgggga
gctggcacctttggctactcttcctttcnctgtctatgtaagtaataaactgtctgaatctaaaagtggc
tcgttgtatctttaccagccgaatcagtcgggccttggccttggccttgccttgcctcgtgtgtgcttga
ca
>L1M2A_5   Primate L1M2A_5 repetitive family - a consensus.
gagagtgacgtcagcaagatggccgactagaagcccctagcgctcgtccccctcacaaagacagccaaaa
caacgaataaacaactacattttaacgaaaataactaaaggagagcgccggagtacatcaaaggagtaac
agaaaccctggtgagcacagaaactcaggatggccacatagagaacggaaggaaacaccnggcctccacc
accccatcccccagccgggatcagctgggaaccaggaggaacttctccctacggngagaaggtaagcaag
aggatcccagcaacccccatcaacaccttggacacctacagtcctcaccactggggtcccctgcagtcct
cacaggcactaagcccagctgagggagctgcctggagtccacacagctgtgctccccccagagaaggagc
cgacactgtgccccgccccctgtggcccacacggctactgcgctacgccatcttggaactggaactactg
ctggagtgtgtcttgctctgggggcgagtagccatngcaccccttcatccctgaggctaagccgccactg
aaccaccccngcccggtggcccaacatccccaagccgagctgcaagcagctgttacacccttccccgtgg
ggccaagcagcggtggagccgctccacctacccctcccagtgctgctgcaccctgccccctcaggccaga
gctgaagcagtaccctgcctcctggggaaacagtgccttggccacccagagcagtcacgcctccctggtg
cctaagctgaagcagcgccctgcntcccaggaaacggtgccttggccacccagagcagtcacacccccca
ggcctgagctgaagcggcacactgccccccggggaatcggtgccctggccgagctgagcagctgcacatc
ccagggctgagctgatgtagtaccccgcgtcccagggaaacagagcagtggctgagctgagacaccccgc
cctacaggccaaacaactctagtaccctgcttccctggagctggactagccccctagagtctgagctgct
gagacacccccctccctggggagtggagtcatcgctgcgctgctccctgccccccgcagggcccaagcga
cagctgtgctccgccattctggggtccttgctgctgctgcacctggcctcacagagtctgggatactgcc
gagccccaccatcccagggtccagagtcaccactacgcggtgcctcatcccctgggacccgagttgccac
tgagccctattggctcaggttcccgaattgcagccgtaccctgctccccgggcccaaacctccagagcac
cccttcttccccggagtcaggccagtgctgtgccctgccccccagggntagaatcacagctacaacccag
ccccctgggcccgagctgctagggggtgcctcagagtcacagatcctggctctgtgggcaacctacatcc
aaccctgccacagagagtaaacctgcaccccaagacccaggtgccacaataggttcgcgagaccctgagc
ctaggaccccggccccacagccgctccgagcacctgcacctggaacccagcgccgctgcagctgcttgta
ggccatgtcagacccgacaccaagagggatcccctcggctaagtctccccattgtggggaaaatgagaat
aggaggaccccaaaagcccttgacaccaaggacattaacaacctacgctgccaccgccgctgccacaaac
ttctacagcctaggccactgaggcacccacagttattgctgacgttgaacgcagctgaagaagctgcacg
gagactataccactgcacctacctggaaacagagtcaccacacccttcccaaccggcacactaagaccca
actgcaggtgaaagtctttctctatgaaagccactctagaaagtttggaagaggcgattgttccaccaga
tgcacagacatcaatgcagggacacaagaaacatgaaaaagcaaggaaatatgacaccaccaaaggaaca
taataactctctagtaacagaccccaannaaaaggaaatcnatgaattgccagaaaaggaattcaaaata
atgatcttaaggaaactcagtgagatacaagagaatacagatagacaattcaatgaaatcaggaaaacaa
ttcacgatatgaatgagaaattcaacaaagagatagatatcataaaaaagaaccaaacagaaa
>L1MDB_5   Expanded 5' end of L1MD2 subfamily - a consensus.
ttaaaaagacttctggtctagacaagatggcgtggacccgtttctccctgctcctccccgctaagtacaa
ctataaaccctggaaataacgcaagaggcaaccaaaggagaactctgaaaggtggtaagaggaaggcgaa
ctggtttgggaccccaggactggaggaacagcacagcggcagggtgtcttacgtccccccacccaacaga
agaaggtgacccagacccggcgtttcccaacccccgacctagcaacagaaggcagcccaggnaggctcat
tcctctcctggatcgaatgggagtccctccgacaacaccaggtgagcccagcgccaccggcaagggggat
caatcgggagccccgctaacaataagcagccaggggaagcgctctccttccccaccgggcctgagactcc
cctcccctgccgagagacactgaggctgncaaggcagcaccggcaagagggatcctgccacaacaagcag
cctggtccgggaagcctctttgtccccatgggcctgagactcccctcccctacccagagacactggggnn
gcaggcggcaccggcaaaggggatcccgccacaacaagcgcccggcccgggaagcctcttcgtccccacg
gacccgagactcccctcccccgcccaccactcccttcccccaccnagaggcaccnggcggcccggcctgg
ggaaaccccttctgccccctcaggcagcaccagcagggaccagtgggagccccagcggcaccagataaac
caagcagaccaaaataacaccgcaaaggctctgaaaattaaactgtcattggaaccacagcccacaaaag
taggccaggacctgcatgctaaacctaaacagggtgactgcctgctaaaataaaagatttaaataggacc
cagagtctcctaacataatagacaaaatgtccaggatacaatnaaaaatcacccgtcataccaagaacca
ggaaaatcacaacttgaatgagaaaagacaatcaactganaccaacaccgagatgaatcagatgttggaa
ttatctgacaaggattttaaagcagccatcataaaaatgcttcaacaancaattacaaattctcttgaaa
caaatgaaaaantaaaaatctcagcaaagaaatagaagttatnaaaaagaaccaaatggaaattatagaa
ctgaaaaatacaataacagaaattnaaaactcactggatgggctcaatagtagagtggagatgacagaag
atagaatcagtgaacttgaggacagatcaatagaatttacccaatctgaacaacagagagaaaatagact
gaaaaaaaaatgaacagagcctcagggacctgtgggacaataacaaaagatccaacattcatattatcag
agtcccagaggagaggaaaaag
>L1ME4A   3'-end of L1 repeat (subfamily L1ME4A) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacgaatttcccaacaaaaaaac
ggacaaaggacacgaanagaccgtttacaaaagaagaaatggaaataactancgaacatgaaaaatgttc
aacctcactaataatcaaagaaatgcaaattaaaacaacaatgagatnccgttcttcntcgtctancaaa
ctggcanagatataaaaagataatakccagtgttggtgaggatgtggagaaacgggcactctcatacact
gctggtgggagtataaattggtacaacctttctggaaggcaatttggcaatatntatcaaaagccttaaa
aatgttcataccctttgacccagcaattccacttctaggaatctatcctaaggaaataatcagaaatgtg
nacaaagatttacgtacaaagatgttcaccgcagtattatttataatagcaaaaaattggaaacaaccta
aatgtccaataataggggantggttaaataaattatggtacatccatacaatggaatattatgcagccat
taaaaatnatgttttcgaagaatatttaatgacatgggaaaatgctcatgatataatgttaagtgaaaaa
agcaggntacaaaactgtatatacagtatgatctcaactttgttataaaattacatatataaatgtatac
gtatntacatagaaaaaagactggaaggaaatacaccaaaatgttaacagtggttatctctgggtggtgg
gattatgggtgatttttattttcttttttctttgtattttctgtattttccaaattttctacaatgaaca
tgtattacttttataatcagaaaaaaaa
>L1MD3   3'-end of L1 repeat (subfamily L1MD3) - a consensus.
tatacatacacatatttcctagctctgtccgctgagagggcctagaatcaatgacaccccagtagcaatg
agcacacctagcatccagatcttggtttctaaataccattctccaataaaaggaaccagggctccttgga
gaaatggctgattctagggctggggcagggaaaatacaagatgagcctggagcatctcgtagtgccagaa
ggtaaggaagtgctcaaaaacaaaaggangggggcatgtcaaaaggacacaggagccaacctgaaagagc
tcccaatggccaaagctggaacaatttgagcaacaaaataaataatgntagtattggattataacccaaa
gtataaaataaatatccatgagtccatactgatataaataaatgattgaataaataaataggggggaagg
gaaacaaatctttcttacagaagaattccaaataatanatgtagaaggaatgagggaagtagaaaatcgc
cattagaacactacngtaataattgccgcaggcaagatccaccgatggatgctaaaattagtgggtgaaa
ctttaaggagaagcnggatatttgcatagcctcaaagtatcttccccaaaatatttattaattattgcgg
tggttttaacatatgtccacaaattagttgatactcctccctccaggaggtggagcttaattcccctccc
cttgagtgtgggctggacttagtgacttacttccaaagaatagagtatggaaagggaaaaatagtaactt
tacagtggagaaacctggcagacaccaccttaaccaagtgatcaaggttaacatcaccagtgataagtca
tgttgatatcatgtaccccctgatatgatgcgatgagaagggcacttcacctctgtggtattcttcccaa
aaacccataaccccagtctaatcatgagaaaacatcagacaaacccaaattgagggacattctacaaaat
acctgaccagtactcttcaaaantgtcaaggtcatgaaaaacaaggaaagactgagaaactgtcacagat
cggaggagactaaggagacatgacaactaaatgcaacgtggtatcctggattggatcctggaacagaaaa
aggacattagtggaaaaactggtgaaatccgaataaagtctgtagtttagttaatagtattgtaccaatg
ttaatttcttagttttgataaatgtaccatggttatgtaagatgttaacattaggggaagctgggtgaag
ggtatacgggaactctctgtactatctttgcaacttttctgtaaatctaaaattatttcaaaataaaaag
tttatttaaaaa
>HAL1B   Primate HAL1B repetitive element - a consensus.
aataaaaaanttagcagaaacannagaagatatggctganaaaatcanagncagaagatgaaatcaaaaa
ggagataaagacgaaancaaagcaattagagagaagntaatagatatggaagacagacaaagnngatcca
acataaggataattgatgtccctgaagtagagaanncaanaaacagganaaagagaaaatttttaataga
tataacanagaaattttcctgaaatgaagaaaaatnaatctgcagatcgaaagaacacaccatgttccag
gaaaattgatacagaatgntcaacactaagacatatcctagttaagttattgaacttcaaggataaagaa
agaattcttcaggcatccaggcagaaaaacaagtcacctacaagggagaaaaatcaggctggcctcagac
ttctccacagcaacattcaatgccagaagacaatggagcaatgtctacaaagttctgagggaaagaaagt
gtgacccaagaatattatacccagccaagntgtcgttcaagtataaaggcaacaggcagacattctcaaa
catgaaagaactcagggaatacagcacccatgagcccttcttgaaaaaactacttgataatgaaatccag
ccaactaagagatgaatcaaaataaagaactcaggaatggagaagccgtggtaaaaggactggtggtgag
cattgaatccatttaaatatagaactaagactaaacaactgtgggaattatggttacagaacagaatgta
aatgttataaaccttgacaatgtaaaaataatataactaacaaaaattgggaggtgggagaggagaggtg
gaaggaagtatgagagtgctaatntcctcatctttcatagcagggagtcaatnnatactgtctaaaattg
aaacatgtagtttaaaaatataatactccaacctcttaatgtttttcataatcttttttcttaaccttag
agggatcttttaggaantaatatctcttgtggtgaagaaacatttatctgaagttcaacaattccttcag
tttcactttagtttctttttcttctgttaaattcaagtaaaattaaatttaatacttttattttaaaata
gcatctgtantatgatccnatttttataaaattatntttntcattctactatccatnctatcttcctatc
tgtatatatgcatagaaagatgtctggaataatgttcaccnaatgttaacgatggttatttctgggtggt
gggatttggggtgatttgttactttcttctttgtatttttntgtattgcttgaattttttataatgagca
tatattattttaaaaaaa
>L1MDA_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggcaaaagac
ataaacctacagatagattcaagaagctgagtgaaccccaaacaggataaacccaaagaaatccacacca
agacacatcatagtcaaacttctgaaaactaaagacaaagaaaaaaaaatcatcttgaaagcagcgagag
agaaatgacaccttacctataggggaaaaacaattcaaatgacagtggatttctcatcagaaaccatgga
ggccagaaggaagtggcacaacaattttttcaagtgctgaaagaaaagaactgtcaacccagaattctat
atccagyaaaaatatccttcaggaatgaaggggaaatcaagacattctcagatgaagaaaaactaagaga
atttgttaccagcagacctaccctaaaagaatggctaaaggaagttctctaaacagaaaggaaatgataa
aagaaggaatcttggaacatcaggaaggaagaaagaacatagtaagaagcaaaaatatgggtaaatacaa
tagactttccttctcctcttgagttttctaaattatgtttgatggttgaagcaaaaattataacactgtc
tgatgtggttctngcnaaaaatgtatgtagaggaaatatttaagacaattatattataaattgggggagg
gtaaagggacataaagggaggtaaggtttctacacttcacttgaactggtaaaatgataacaccagtaga
ctgtgataagttatgtatatataatgtaatacctagagcaaccactaaaaaagctatacaaagagatata
ctcaaaaacactatagataaatcaaaatggaattctaaaaaaaatgttcaagtaacccacaggaaggcag
gaaaaagaaaacagagaaatgaaaaacagaacaaacagaaaacaaaaaataaaatggcagacttaagccc
taacatatcaataattacattaaatgtaaatggtctaaatacaccaattaaaagacagagagattggcag
agtggattaaaaaacatgacccaactatatgctgtctacaagaaactcacttcaaatataataatatagg
caggttgaaagtaaaaggatggaaaaagatatatcatgcaaacattaatcaaaagaaagcaggagtggct
atattaatatcagataaagtagactcttcagagcaaagaaaattaccagagacagagagggacattacat
aatgataaaagggtcaatccacaaagaagacatagcaaatcctaaatgtgtatgcaccaaacaacagagc
tgcaaanatatgtgaagcaaaaactgatagaactgaaaggagaaatagacaaatccacaattatagttgg
ggacttcaacanccctctctcaacaattgatagaacaactagacagaaaatcagcaaggatatagaagaa
ctcaacaataccatcaaccaataggatctaattaacatttatagaacattccacccaamaacagcagaat
acacattcttttcaagtayccanggaacatataccaagatagaccatatcctgggycataaaacaaacct
caacaaatttaaaagaattgaaatcatacagagtgtgttctctraccacaatggaatcaaactagaaatc
aataacagaaagataacaggaaaatctccaaacacttggaaactaaacaacatacttctaataatccatg
ggtcaaaaaagaagtctcaaaggaaatnaa
>L1MEB_5   Partial L1ME LINE1 repetitive element 5' end - a consensus.
cagacttccgcttccggtaatggtggagtaagctcctaccggaccaaccctcccgcagataacaactata
aactctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaccaaaagcaggcagaaactg
gaggggagtcgacacctggaagaagggaatwgcacggagtgagttcccatttctacggctttttgcctga
gagcaggccgcagttggtgcgtcgtacagatggctaaaacwtcagtagaaaacccgcggtcttactggct
tgaagaaccagagaanagaattcggggcaaccacagccactggaaagtgaggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactccaagcagcccagctaaagacaaaagaactgaactgagattggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagytaactgcctactaaaacaaaagaaacaacac
tctttagagaaaaataacagaatccagagtctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmagataagaagaaacagraaaaatgtaatncatccttaagagaaaagaaaataaaaaccg
accctgagatraaccagatgttggaattaacagacaaggactttaaagcarctattataaatatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtcagtgaacttaaagatagatcaatagaagttatacaa
tctgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgtgcgacaatatca
aaaggtcnaacatanatgtaattggaatcmcagaaggag
>TIGGER6B   Non-autonomous DNA transposon.
caggcagtcctcgctttgcacggttccgatatgcataaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccatggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactatgtaaataacagatgcgcatcatgatcagtga
ccaatcacgtcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattggatgtgattagaagatttgaaaatggcaacagcaaagcgaagataggacgagacct
aggcctgcatgaagctanggtacgaaccatattgaaaaagtctgatgaatataaaaaacaaggtaaagtc
gcttcaacatcttttagtttaaattgcactaggaacagaaagccgcttatggttgaaatggagcatttac
ttctactttggattgaagactgtaatnaaaaaacaatcccaatcagtttggctagcattcaggccaaagc
gttgaagttagttgccgcattgaaagaaaacggtaattacaaggagactgaagaagaatcttttactgcc
agtaaaggctggtttcatcatttcagaagttggcatgaattgattaatgttaagctatctggtgaagctg
ctagtgcagataaggatgctgctgtgaaatttgcacccagattccaaggattngttaaggcaggtggtta
tgatgatcgtcaaatatttnatgttgataagacagatcttttttggaaggcaaccccatcaagaacttan
gcgaaaaaagatgtaggatcacaaagtggccattcgagagactctagatatgcagccagaggaacttagt
gaaggcgaacttatcgacataaatgaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaag
tgacgccggcaaaaaacttcacattaaaggaactctcggagatatttcacgacattgaaagcgcaaagga
taaaatgttggaagctgatccaaacttagaaaggagtatgacaattcgccaaggcatagaaaagatgctt
gctccgtatcgtaagttatacgatgagaagaagaaggcaagcactgttcaaactactcttgataagtttt
ttacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattacagtgtactaaataaata
ttagttttactattttttcatttccctatacatttataaccgacagtaagagagtttttaatgttttgac
aaaaatttttaaaggtcacagaacaattgtaatttttcccattgattattaagattgctttgcacggttt
cagcttgcacggtcatttttacggtcccgcactaccgtgcaaagcgaggactgcctg
>TIGGER7   Autonomous DNA transposon.
cagtagtccccccttatccgcggtttcgctttccgcggtttcagttacccgcggtcaaccgcggtccgaa
aatattaaatggaaaattccagaaataaacaattcataagttttaaattgcgcgccgttctgagtagcgt
gatgaaatctcgcgccgtcccgctccgtcccgcccgggacgtgaatcatccctttgtccagcgtatccac
gctgtatacgctacccgcccgttagtcacttagtagccgtctcggttatcagatcgactgtcgcggtatc
gcagtgcttgtgttcaagtaacccttattttacttaataatggccccaaagcgcaagagtagtgatgctg
gcaattcggatatgccaaagagaagccgtaaagtgcttcctttaagtgaaaaggtgaaagttctcgactt
aataaggaaagaaaaaaaatcgtatgctgaggttgctaagatctacggtaagaacgaatcttctatccgt
gaaattgtgaagaaggaaaaagaaattcgtgctagttttgctgtcgcacctcaaactgcaaaagttacgg
ccacagtgcgtgataagtgcttagttaagatggaaaaggcattaaatttgtgggtggaagacatgaacag
aaacgtgttccgattgacggcaatcgggttgcgccagaaagcattgagcctatacaaagacttcagcaag
ggatcccctgaaacgagtgacaccaagccatttactgcaagtaagggatggttacacagattcaggaata
ggtttggactgaaaaatataaaaattactggagaggccgcatctgccgatgaagaagctgctgccacatt
tccggcagagttgaagaagttgattaaggagaaaggataccatccaaagcaagtcttcaactgcaatgaa
accggactcttctgggagaagatgnccaatagaacctacattcataaaagtgcaaaggaggcaccagggc
ataaaacatggaaggacagattaactctggtactatgtggcaatgctgcagggcatatgataaagccagg
cgtagtgtacagagcaaagaacncacgcgctctcaaaaacaaaaccaaaaattatttgcccgtgttctgg
caacataatcagaaagcgtgggtgacagccatcttgtttatggaatggttccaccaacgcttcatcccag
aagtgaaaaaatacttggaagaggaagggctggaatttaaagtcttattaataatagacaatgcacctag
ccatcctgaatctgtttgctatgaaaatgaaaatgtcgaggttgtatttttacctccaaatacaacctna
ttgcttcagccccttgaccagggcatcatttggtttgtcaaggccacatacacccgcctggtatttgatc
gcattcgatcagcaattgatgcagaccctaatctggacataatgcagtgctggaaatcattcactattgc
tgatgcaataacattcatcaaagctgcaatggatgaattaaaaccagaaactgcaaatgcctgctggaag
aacttatggagtgaagtcatgaatgattttaaaggcttcccggggatcgatggagaagttaggaaaatca
ttcatgcagcaagacaagttggtggagaaggatttgccgacatgcttgatgaagtggaagaacatattga
aggccatcgagaagtgttaacaaatgaggaactggaagaacttgttgagtcatctacagaggaagaggaa
gatgaagaaaaaactgaagcagaaccagcaatgtggacattaccgaaatttgctgaagtgtttcaaattg
cacagacattaaaggacaaaattatggaatatgatcctcggatggaacgcagcattaaagtcacccatat
gatcaatgaaggattacaacctccgcagcaacactttgatgagttaaaaagaaagagacaacttccgatt
acaatgttcttccaaaaggtttcggcaaaaaaaccttcaactatcgaggatccccagccatcgacatcgt
ctgctcctgacatccaaccatcgacatcgtcatggctcgatgatccaggatcacccgaagcagatgatcc
tccttctgacgtatcgtcagaaggtcaatagtagcctaacgctacgtcacaatgcctacgtcattcacct
cacttcatctcatcacgtaggcattttatcatctcacatcatcacaagaagaagggtgagtacagtacaa
taagatattttgagagagagaccacattcacataacttttattacagtatattgttataattgttctatt
ttattattagttattgttgttaatctcttactgtgcctaatttataaattaaactttatcataggtatgt
atgtataggaaaaaacatagtatatatagggttcggtactatccgcggtttcaggcatccactgggggtc
ttggaacgtatcccccgcggataaggggggactactg
>MER44D   Nonautonomous DNA transposon.
cagtagtccccccttatccgcggtttcgctttccgcggtttcagttacccgcggtcaaccgcggtccgaa
aatattaaatggaaaattccagaaataaacaattcataagttttaaattgcgcgccgttctgagtagcgt
gatgaaatctcgcgccgtcccgctccgtcccgcccgggacgtgaatcatccctttgtccagcgtatccac
gctgtatacgctacccgcccgttagtcatcgacatcgtctgctcctgacatccaaccatcgacatcgtca
tggctcgatgatccaggatcacccgaagcagatgatcctccttctgacgtatcgtcagaaggtcaatagt
agcctaacgctacgtcacaatgcctacgtcattcacctcacttcatctcatcacgtaggcattttatcat
ctcacatcatcacaagaagaagggtgagtacagtacaataagatattttgagagagagaccacattcaca
taacttttattacagtatattgttataattgttctattttattattagttattgttgttaatctcttact
gtgcctaatttataaattaaactttatcataggtatgtatgtataggaaaaaacatagtatatatagggt
tcggtactatccgcggtttcaggcatccactgggggtcttggaacgtatcccccgcggataaggggggac
tactg
>MER106B   MER106B is a nonautonomous DNA transposon - a consensus.
catgcattctcaacgggggcgatatcgcccccaagggggtgaaaattggttcttggggggagaaaaaatc
ttagatattacaatggtttgtggccctccaaagctcaaccctacccgacaaaatcttattccttagtatt
taatttctcnttgggttttcttgggtatcacacgagcagcactgacattgagttcatggaagatacacga
aatgtatgcaagatcagtgctacaaaactatggcgaatagatgactgtggttggaggactttcttcgatt
gattgctcgatctcgaagtcatatngcgagaggtggcctgtgcgtgcctgttggctgccactggctgcct
tgtggatgttatttatgtttgatcctcagtgctttgtgtgacttgggctttgagaattaaataaaantag
tttatattttattatttaattctacaaaagttattcaacccatcattaattatgtcaagtgctgaaaaga
aaaaatgttgacaatatctgaatgaatatctagcagctagttaagttaaaagttattttctcatatcaag
caaaagttaaaagttaacttcaaaaataattttnaagaaattaatttaattttttcaattgttttacttt
tgctggaaaaatcagttttgaatgaattttttaagtattgattacattgctattaatgtatttatataaa
ttgctaatttgtatatgtaatttgacacantagaatttatgtaagtaaataaattacattaaaagttact
cagcaaatacagttacaaagttaaatttagatattaatagctttttaatttttaatttagcttttaactt
aaaattttattcagtcattcttaaccctncattgaataaaaagagaggctttatacttaccctttttatg
tataaagcacagatataggcgcagtacataaacagatatacagtatatctgtggtattaaaatttcatgg
ngggggggggtgattaggaaaaaaatgtctaaaaaggctccttaggggggcgataatgaaaaaaggttga
gaaacactg
>CHARLIE2A   DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacgtaaagactttccaaggggtacgcgggca
cggatagttttaagggaatcaatttccagatcctcaacttccatatgtactctttcctaaaactgatctg
cctgagaacgtacctgtggcgaagtctgccctttcccacttcccctttcacaattgcccttctcccactt
tacaaaagaaaggcatatctctcacccatcccgaatcttactatggtgcattgccccggggtgtaaaaac
ctccagggcgccaaacaaagggacaattcgaaatattggtgttggggaagcctcctttaatgattaatca
aggcaccataaacccatggtagggcttcctgtctttccctgtcttatacatatttctgttaagggtgaag
catggcgttagaaatggggtattttggcccgtgttgggatgttctgaattcagatatattgtagagtggg
gcagtggaagtgatgacaattttcgtttaatgaccttgcctcttccattccccgactattgtcaaagaat
gcattgctcctgagggagagtcccgtgagagcaaagcaaagagagcatcggtaagaaatactgaatgcta
aaaacggcattttttcacatatttaaacgtaagcaattcttttcagctattctcaacactcatccctagg
atgtgtcattagctggaaagaaaagcaacttcgaacagccgaagcagtataggttagtgacgctgattct
tttaaatgtaactggaatgttttctaggactaccaaatttttcaagatacattggataaaacccgcggat
aaaanttttacatgatttctttcagatttggtgtgcattattcaataaggtagttaaaacctattttatc
aaatcatatcatgaaatatttattccaattacagtcaatcctcatcttatttcatcttataaaatgttta
atattttctacctcctattaacaaaaaataaaattatatgctagctgccggaccgattagtttttagcag
tatatacctttttctttcattaaatacataggaaaagtttgatcatnatgtctaataaaattaatggagt
tatttctgatttttatacatgattcttatttaattattcccaaaagccgaacaccagagttcaatataca
catgcacacatatttacnaaaggaataccatgncttttatcatactccttgcttcataaataacttataa
ttttagctacanattacattgcattattncaaattaagtaatgagaaacagcatantgatttattatctt
gtttttataacttactataaaaatagatnaattatattagatctacatnattttaatcttgactgctttt
agtaatctatcttataagatacattccgtaatttatttctcagtaatttttataatattccttaaaatgc
atattaacacatttatttgaattgaaaaatgaagtcagactttttctgacagaaagtaagtctgatttgg
ctgattggtttgacaatgaggactggctttgccaattaggttatatggcagacattttccataaattgaa
tgagctaaatctgcagctccaaggttttgacgaaaatatatttaaagcacgtaataagataaaagcattt
tntcaaaaaatattgtattggcaaaggtgtantgaaattaacaatatttcaattttcccaaccctttctg
agtatattggattaaacaaggtgcctctaagtgaaagagtaacaggtataattaatagtcatttgataag
tcttggtaaagcctttttggtatacttcccagaaattgagaaagtgaatgactctaatgactgggtaaca
aatccttttgcaagtcaggtggtttccaattctttgctttcaacaaaattgaaggaggacctaatcgagt
tgtcagctgatagatcattaaaaataatttttgatgatagatcactatgtgatttttggcatataactcg
gaaggagttcaaagaattgagtgacattgctataacaaaactccttccattcccatctacttatttatgt
gaacaaggtttctcagcgcttacatctataaaaatgaaaaataggaatagaattgatgctgaaccctgtc
tcattctagcaataagtaatattcatccacggatacatgaactaattgggaaaanaaagccccatccatc
tcattaagagatgcatttccaataaaattttactttttatgtttaatatttatcaaaatttgtaatatat
ttatgttgttttgatcaattgtatactaataataattgtaatgataactcaatccagaagaaaattttta
acacttagagccttatggtcacaggaaatataaaaaattaaatttcaatttatatacatatttttgttgc
agagaagtatgatagggtgatcaataaaagactttcaagcataaaaatatattacattaggataaaattc
tgtgggggaagtggaatggaaatatgagttcaaggagaaaaagagaacgatgtaaaatttctgactgtta
aagaagagcttgttcatgtattttttaaatggatgatggtgggtatcaaatcgctatggtatttagattc
cattggatacatttaaaagagtgatgtaacagttttattttaaaatgtcaatatttacaatatgccagaa
attacatcctttgcaactatttaaacttatgatgaaaaattttagatgtcaacttaaaaatgtgcgaggg
ggtacatagtttttcaaaattcttttagggggtatgcgagcaaaaawgtttgaagaccactg
>CHARLIE7   Molecular fossil of a hAT-like DNA transposon.
cagtggtctccaaagtggagtgcgtgcaccccagggagtatgcaagatgatccattggggtgcaggaaga
aaatattagaacttctatttatatttattttatctaaaaaataagaaaaaaattaagctttactaatatt
taatatatggattgacactggcgccctcactcggtctntatgtcagacggtcacatgtcacatgngatac
gtgaggtatcctgagggaagagtggaagttccacantgnggaggggttgacagtggcgccctcactcgtt
catttgctttcagcatattgcgatatattgcagtttacatgtgcctagttaagtggatttacggattata
ttatctagttttaactaaactaaccctcacaaaatggacaagtggcttaaaaagattcctgcaaagaaac
cgcggattgaagataatactaataatgcaagcacaagcgaacaacaagaaaatggcagagctgacacttc
tcctcctagtacgagctcttcgtcagccacattacgaggtaaaaacaatgacgatctaatcagatctgac
aagaagtcagcaaaaaagnttgaaattatcaagaagactatttgaaatatggatttacatccactatcat
taacgatgaacctcgccctaagtgtatattgtgccttgagatattagctaatgatagtatgaagccatca
caattagcaagacatttaaaaatgaagcatccagaacatgaagacaaancctctataatttttcagcgat
gtttaaagtcatgtgatactcaatccagtactttacaaaatttcactaaacttaatgataantgtttaga
agcctcttttgaggtttcttactcaatagaaaaaaaanaaaagccacataccattgggaaaacgcttgtt
cttcctgccacagtaaaaatggctgaaataatacgtagaaaacaatatggcgacaaactaaaatgcattc
ctttgtcagcaaatactgttggaagacgcatagaaaacattgctgaagatttgaagaaacaagtattaga
acaaattatgcagtgtgggaggtttgctatatanttggatgaaagtacagatgtttctaacatgtctcag
cttgtggtatttgctagattctgtttcaataatgaaatacataaagaactacttttttgtgagccactaa
aggaaagatgtnccggagaagatatattctcaacagtaaatgacttctttaatgaaaacaatgttttatg
ggaaaacngtataagtgtanccattgatggagcagccgctttgactggaatannaaaagaattccggggt
aaggttacagagacagcaccacangtgaaattcattcactgcatcattcayaggcaagctattgcagcaa
agaagttgaagccagaggtacacgaagtgctacaggatgtcatcgatgtggttaattttataaaaacaag
acctttaatatacagtagaatctttacaatactttgtaatgagatggggagtgaccatgaaaatcttttg
taccacacagaagtttgctggttatctcgtggcaaagtacttaaaagagctgtcaaacttaaagatgagt
tatacatttttcttttacaaaaagacaagtgttccaaatttgctgaccttttctgtgatgacaagtggct
gtcagtagtatgctacctagcagatatttttgaaaaaataaacacacttaatctgtcccttcaaggtaaa
ggtgacattttaacaatgagtgagaaagtaactgcttttcgaaagaaactcatgctatggagagagcatt
ttgaaaatagatgtttggaaatgtttccatcgttatgtgattttgttgctgaaaacgatgtaaatgtgtc
acctataaaaattctcatatctgcacactttaaaaacttggaaacagaattttctaacctgtttaaaaat
cttccaaatgaagagtttcagtgggttttgaacncatttgttaaaaatatnaaaatgcaacaccttccga
ttagtttgcaagaacaactgattgacatcagggaagatggaaatttactagccgaatttcaacaaaaacc
tttgcataattggtggatgggattgaaaaatgagtatcatgatttagtaagcgcagccaacgatgcactt
cttccatttggatctacgtatctttgtgaggtatctttttcagctatgacagccattaaaaccaagtatc
gaaataaactgaacttagaaccagaccttcgaatcgctgtatcacaaagtgttaaaccaagatttttaaa
aataatgaagcatattcaatcacattgctctcactaaaaatattaatagtaatgttttaatgagagcaaa
aggttttgtactattaaataatnaaatanaaattattttaaaatattgtttatttcatctttatctcatc
cttttaaaatttctantttttgtgtatgttttataatgtacataatatattagtacatagtacatgtata
taatttataaataaatatatatatattgggggtgcatgctcaaaattttttactgatggggatgtgcgat
caaaaaagtttggagaccactg
>CHARLIE8   Molecular fossil of a hAT-like DNA transposon.
cagaggtcgcaaactggcggcccgcgggccgcagatgtgttttgtttggcccgcacagtgttttnaaana
tttttgaattagttgccaacatttaaaaatcgggagatttcacataaaaatctagatttctggcttctct
tgaaaaatcagaagatctggcaacactgggcccgcattcccacatggcaacaattggctggagctgagta
gcagctgccccctttagacagggcatgtgctctccagtttgccacagtccccacctggcccnccgcttcc
aggtccagccaccgttgtcatcaggcttgcgctgttgttttcctcatagtagcgataagagaaaagtgaa
atatttcttgtacccattgtctctgtcaaaagtgggaaaacgaaagatagaccaagagggccgcgtgttt
caagaaaagtgggagagagcatatttctttgtggaagtgaagaatattcctacatgtctaatatgcaaac
aaagcgtgtctgtgtcgaaagaatacaacctaagacgccattatgaaacaaaccatggcaagaactatga
ccagtatacggaaaagagtgcgtgatgaaaaacttaacgaactgaaaaaaggactgaaatttcaacaggg
tttgtttttgaatgcgaataaaataagtgatgctgctatggaatgcngttatgtattaagtgaaaaaatt
gcccgggcatcaaaaccttttacagatggcgagtttataaaagatgtttattgaatgcagcagaaattat
gtgtcctgaacagaaacaagcatttgcaaacntaagnctaaccggaaatactgttgctcagngtgttgaa
gatatggctgagaacttacaggacaagttgcgtgaaaaagtnaaatcntttgtggcgttttctatcgcag
ctgatgagagcacagatataaataataccacccagttagctatatttatccgtggtgttgatgagaattt
tgatgtgaccgaagaacttttggacanggtgcccatgacaggcacaacatcaggaaatgacttatttttg
tgtgttgagaaaagtcttgaaaagttcnatgtngactggtcaaaattagtaagcgtgaccacagatggtg
ctcctgcgatggtcggtgttaanaacggacttgtcacaaaacttaaatccaaggtggcaacgttttgcaa
ggacacggaacttaagtctgttcgttgcatcattcatcaggaancgctttgtgctaaaaagttaaaaatg
gancacgtcatggatgtggtaattaacancgtgaactggatatgctcccgtggcttgaaccacaganagt
tcagtgctttgcttgatgaattagatgcacgatatggtagcctgctgtactacatggaagttcagtggct
nagttgtggnatggtgctaaagagattttttgaactgttggaagaaatcgacttgttcatgtcatccaaa
gggaaatcccngcctcagctcaccggcaaagattggatcaaagacttggcctttttggttgacattacaa
cccatctaaatactttgaatatttctctgcagngacgttcacaaatagttacacaaatgtatgattngat
tcgcttgttcctagcaaaattgtgcctttgggaaactcatttggcaaggaataatctggcccactttcct
acgctgaaattggtttccagaaatgaaagcgatggcctgaactacattcccaaaattgtggagttnaaga
ctgaattccaaaaaaggttctctgacttcaaactttatgaaaatgaactaacattgttcagttcgccttt
ctcggcgaatattnacagtgtgaacgaagagctacaaatggaagttattgaactgcagtgcaacacggta
ctgaaaactaaatacgacgatgtnggaatnccagaattctacaaatatctcnggagtagttncccnaaat
ataaaaaccattgtgcaaagattctatccgtgttcggaagtacctatatttgtgaacagctgttttccat
tatgaaactgaataaaacnaaacattgctcccagttaaaggattcaaggctgaattctgtactgcacgtc
gcaacgtgatggagagagaantcctggcatgggccctatggnagggaangctcgagtcttccggtctcaa
agnattgngaaatganaaaatnaataattaaactatttctattttcaatttgtatttttccattttgaat
tagaaatataatctccagtatcatacatgtttgtattacgttntatgcntcactattcaataaaaatcaa
gaaagttnnattatatttctggcggtcgacttttcttatgcctggcccncttcactcatttatgttacct
gcctggcccctgtaggcatttgagtttgcgacccctg
>MER63D   Primate MER63D repetitive element - a consensus
cagtggtgtgctggtaaatgtttaacaactggctctctgggggaaaaaatgtatgtatgtatatacatat
ataagtttattataaattttactgatataaaggatgtgtagcacacaatttacaaataataataaaatat
acaatactctttattgtaaattccatatagccaattgattctcacagaatgcttttattgatttttgccg
aactcttgtatccgtagccaacctatggttgcaattgacgaacgagtgtagttccaacatgaatgttggt
tgatattttcgtttacattaatgagtaagannangatttgacaaatggagttgcatcccaatctataact
ctttccaataaatttantttcataataactgatgtgatctactgttaaactatttctcaccttcgtanaa
attatattnattaaagtaagacgaaagtgaaacaacgaagacgtatgtcggaacttcactcgttcgtcaa
tgatgtgagcgacttctttgctgaatcggataatagttttcaaatactggaagaatatttcctcaatttt
ttgtgctattcacaatgtaacggctacagacacgacacacttttaagtttaatctgcattattaacattt
tctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctgatttgtagcgtttgcc
aatttccgtggtgtaaatactcccaccatggccgatttcaagctaccaacgtgacgtcactgaacgcgga
gttgggaagagatgcgcagtagcacaccattatatagtatttccaccatacagatacaatagacgtaaat
aacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatgagttttgagtatttat
tacctttgtttttaatataatttatttaattgtaagtttatataatttaatttttaataatggctgtgtt
taacaaccggctcgcaaaattcctgaaaatttaacaatcggctctcgcgagccggtatgagccggctcca
gcacaccactg
>MER97A   MER97A repetitive element - a consensus.
cagtggcgtaccaagggcggggcggtgggagcggtccgccccaggtgcaggcaataagggggtgcattgt
ctgtagagaatttaaaaacaataataaaactgactaaaagtcggtctgctttttattatcaccatgcgcc
ggcaattctaaacaatgtcagtgataaaatactcctcccnnaaaaatcttttgttggtctaagttctaaa
caattgctgcggttactgttgagttttaataatatatatatgtaaacttcaaattagcacatttttatta
cttatcctttaataaacattgtattctacatggaagttaattcggagaactcccagttatacagtcggcc
cccgacacacgcggactcagctacacgnattcgtttcgagagtaagttcataanggttcggaatcattcg
agctcgcttcgggtncagttcntgtctccaacccctgtggtactacatattcctgcgtttaaacagtaga
tttnaaataaacaatgatagcacagtgattgtaaagacgaagaaacagaacttgagttacttcaattctg
tcattctatgtgaccacttggagtttttatttgtgtttaaaatttaaaacagtgaaacagagtgcgaact
gcgaggtgtaatatttttgtttggtaagtgcaaattttagttcatacatgaaatattttactgaatttga
ataatatctttaaaatngaaatttattcttcttnaaattgttaattatttgttttaaaactaaagaacaa
aatcaaaaaaatgattattactgattattacatgattattactgaaaataattttgtcatatagaggaag
ggngtgttaaaaaatgatccgctctgggtgtcgaatacgctaggtacgccactg
>MER97B   MER97B repetitive element - a consensus
cagtggcgtaccaagggcggggcggtgggagcggtccgccccaggtgcaggcaataagggggtgcattgt
ctgtagagaatttaaaaacaataataaaactgactaaaagtcggtctgctttttattatcaccatgcgcc
ggcaattctaaacaatgtcagtgataaaatactcctcccnnaaaaatcttttgttggtctaagttctaaa
caattgctgcggttactgttgagttttaataatatatatatgtaaacttcaaattagcacatttttatta
cttatcctttaataaacattgtattctacatggaagttaattcggagaactcccagttatacagtcggcc
cccgacacacgcggactcagctacacgnattcgtttcgagagtaagttcataanggttcggaatcattcg
agctcgcttcgggtncagttcntgtctccaacccctgtggtactacatattcctgcgtttaaacagtaga
tttnaaataaacaatgatagcacagtgattgtaaagacgaagaaacagaacttgagttacttcaattctg
tcattctatgtgaccacttggagtttttatttgtgtttaaaatttaaaacagtgaaacagagtgcgaact
gcgaggtgtaatatttttgtttggtaagtgcaaattttagttcatacatgaaatattttactgaatttga
ataatatctttaaaatngaaatttattcttcttnaaattgttaattatttgttttaaaactaaagaacaa
aatcaagaaaatgaagcattacaccagtggtatgntttwgtagttgcctaaattgtaccttttgcagacg
ttttagttttmttaaaattggcmttmtgatttttactgtcttaactatacacaaaagttnataaaanaaa
ttttnaantntttntatttttgawgcattattattattactgattattacatgattattactgaaaataa
ttttgtcatatagaggaagggngtgttaaaaaatgatccgctctgggtgtcgaatacgctaggtacgcca
ctg
>MER97C   MER97C repetitive element - a consensus.
cagtggcgtaccaagggcggggcggtgggagcggtccgccccaggtgcaggcaataagggggtgcattgt
ctgtagagaatttaaaaacaataataaaactgactaaaagtcggtctgctttttattatcaccatgcgcc
ggcaattctaaacaatgtcagtgataaaatactcctcccnnaaaaatcttttgttggtctaagttctaaa
caattgctgcggttactgttgagttttaataatatatatatgtaaacttcaaattagcacatttttatta
cttatcctttaataaacattgtattctacatggaagttaattcggagaactcccagttatacagtcggcc
cccgacacacgcggactcagctacacgnattcgtttcgagagtaagttcataanggttcggaatcattcg
agctcgcttcgggtncagttcntgtctccaacccctgtggtactacatattcctgcgtttaaacagtaga
tttnaaataaacaatgatagcacagtgattgtaaagacgaagaaacagaacttgagttacttcaattctg
tcattctatgtgaccacttggagtttttatttgtgtttaaaatttaaaacagtgaaacagagtgcgaact
gcgaggtgtaatatttttgtttggtaagtgcaaattttagttcatacatgaaatattttactgaatttga
ataatatctttaaaatngaaatttattcttcttnaaattgttaattatttgttttttatttaatwgctat
aacattatttattattgtgacanatcagtgtaacaggcmattntttcctctcnttcaaaaaaaatacatt
aatgtaattaaaaagtattaatccattacttttttccttttntttwaatgttatttattnttnatttttt
actacnggcatgattatatantgaagttcaataaaatgwaantttgctttctnnntatttctntgtatta
ttattactgattattacatgattattactgaaaataattttgtcatatagaggaagggngtgttaaaaaa
tgatccgctctgggtgtcgaatacgctaggtacgccactg
>MER6B   Nonautonomous DNA transposon.
cagtaagtcctcacttaacgtcgtcgataggttcttggaaactgcgactttaagcgaaacgacgtacagc
aggtcctcgaataacgtcgtttcgttcaacgtcgtttcgttataacgttgatgaggaaaaaattggtttc
gttatacatcatttcgcttaaagtcacagtttccaagaacctatcgatgacgttaagtgaggacttactg

>ZAPHOD   hAT-like autonomous DNA transposon (a consensus).
cagtaccgcccttagacccgggcaagaggggcccctgccctgggccccgcgctttagagggccccgcata
tcacaaacacacacaaataaatttattaaagaacacatgggtgcctctgtcactcgggatccggcgctca
gcgctggcacagcacgacccgtaaccctaaacatccgctctcgtgactaacaccgttcaggccccaggga
aatgcttctccacatctcttgccctgtgtcctcgaaacaaaaggcgactgtgtccgaatgccatgaaggt
ttgtgggttgtgccgctgccgacgtcggagacggacactgcttcggagtgcagggaggatttgagcggcg
gaagcgcttaggtaagagaaaagacaaattaattaacttgtcaaatccttcctctcagatagcatgaatg
caatagattcttgcataacgaagtatcatttcccagtagtgccgagcgtccattttcttgcttctcttcg
tgttccaattcgtggttccggaggtactcacaaattagcgcggtattcgcaacagttgcacatggcagct
gaggaacattttgcaatattaaacaattcatattactcttaaatttgtatatatgtaggtctagacgtaa
catgcatgaagcgtgataccgattctttacattggcaactagatggacattgaacgctagaattgcgaat
agttttatttttataaaaatatttaataagatttaattaaattttcaaaaattaaataaaaatttcagct
ttatttaaataattttgatttaaaanttttatatttattaattataatttgtattttgccttttaatttt
aatagataattttgaatattttagaaaaaaaaacatataaagtaaatatttaaattttacatttacttta
atttacatttttgatgaaaatatattcaaattttgtanactttgaatacaattaattttatttttaatcc
tttagatcaccgagaatgagtacaagtcaagatcntgatagaaatanaaaatacnaaagtggagctcaga
aaanaaaaaagctgaaaagaaaaaatagaaaatcttcaaagaggcggtctgcttaaatttttnaaaactg
naaacaatgaaagtaagcagacttctgcngagcatgacccacataaaattcgcaaacaagacattacaaa
ttctttatttaataaagatttaattactgatcaaaacaatgaaaatgagcaagaaaattattctnatcaa
atccacaacttgaacaggtcagatgaaatccctgcaacttcacgttcttcactaaatgaagatttaatta
ctgatcaaaacaatgagaatgagaaaaagaattatttatancaaattcgcaactcaaaagaaacgaatgc
aactccggcctgcccattagaagatgaagaaagttacatttatgaaancggcaaattgaatgacgaaaaa
aaaaacctctagctttattacgctttattagatggcgatcctagaaaatggtnatcacatccttctnaca
gcatgagaatgtttctagcaaaacgcaattcgattcaaattaatgntnatacaattttccactgaatgaa
catggcagaaaatttagtatttnattttataccaaaattntttcnaatggagaaagaatagagacwtttt
tmatattcaagtcagaagtcgaacattttgttactattgttacatatttcactcnatttttacagtcagc
tttgtccaaagaagtaatctgtnactggaaacacttngattttnaattaaaanaatacaaaatgtcattt
acaccgcaaaaaaatacacacgcaaatactagaatggaaaaaaanaggccaaatnancaatagtattcaa
caaataaacgcaaancaaattanaatattgntgtgatgttcttaaagaaaatattangtgtccaatattt
agccaagcataatgatgctttcacgtgncancaacagcncaatgtttatagaaaacagtggaaattttct
aggtttagtagaaatnatttcgaanttgatgcnaaaatggccaaacatgtaatacagattaaaaatgaac
naaatgatcactacntagaatggagaattcaaaatgagattactantttaatnggtantaaagtgagaga
agaaatcatagacaacaatttagtaagtaaatattactcagttcaactagattgtgctagggacaaaaat
catgttgaacanctaacatttattgcatattactgaactatcagaggaagaaaacaaggatatcaaaatc
aattaatatttcattggttttatacctaaaagtacaggttttganttaagtgaagaactgaaaagacaac
tttcaattttaggnattgatttaaaagattgtcgagggcaagcctatgataatggcgctaacatggttgg
taaaggaaaaggtgtacaagccagaattttggccgaaaatccagaagcattctttgtgccatgtacagcn
catagtttgaatttgttactaggagacgtggcctcaactgtgccaanagnagtgatattctttggaacaa
ttcaaagattatatacgatattttctggatctgcccaaagatggaacatcttgatgaaanacatatcaaa
tttgaccttacaaccactctcagacacatgatgggaatgccgactaaatgctgttaaagcaattagattt
aatttagacaagatanaagatgcactagaagagttaagcgaaacaacagaagatcctcaaataaaaagta
aatcgtggtctttggnagaaaatgaaattaattttgaatttgcgctatccacagttatttggtatgaact
gttgnttgctattaataangttagcaaaagcttatccaaacagatccgagtttggctattttatcttttt
aaangattaaaacntatttttttaaattttagagaaaatggtttttcnaaatcaaaagaaactgcatgtg
aaatatgcaacaaaagtgacattccaataaaatataaggaaatcagaacaagaaaatgaaaacatttgca
tgactntgaaggaaagaattcacatacaaataatccccaaactaatttctatagagactattttctggcc
attatagatcaaggtatagtctcgattgaagagagatttgaacaaattgagcaatatattgctattttcg
gttttctttataatatcccagcattgaaaaatttgaaagaagaacttaagaaatactgtatggatctaga
tattgctttaagagatggtgaaaatngcgatataagtgatagtgatttatatgatgaaattaaaatattt
tgtaatattttctgcgataatgataatttatcatatgcgaccccattacaatgtttgaacatgatatgta
aaatttatggttcatttccaaatctaagtattgctttaagaattttattgacaattccagttgctactgc
ctcagcagagnaaagtttctccaaattgaaattaataaaaaactatctaaaaactacaatgactcaagaa
aggttgtctaatttggcattactgtcaatagaacacaaattatgtgaaaatcttgattataacaacataa
ttagtgattttgctgaaatgaaggcaagaaaaataaattttatggaataaatacataataatttatgaat
tatgtatgtctttattttattactcatccaaacattgccggcccatcaacagaacacccagacatgtgca
ataataattaaattcagtcatctttgatattttgccaactttcagtcatataaaaaccatagctttacac
atatttttaattttgtcattatgaaggtatatttgtcaaggtaggaggatagaacatattttatttaaca
gtttgttagcttgatttataacttttaaatatttagacatatggtatgtgggcctccatttgtactcttg
ccccgggccccgcaaatgttaggggtgggcctg
>MER104B   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcgttattcctagcggcatgactgggcatgcaacctttcgcgtttcagttaacaaacc
atttaaggaccatttgaggaaggaatatgagtcctggttgttgtctgaaaaccttctgttganaccttct
ggtaagatcaagaaagcgccagcatcaaaacttgcagaatgggtgtcagcggcttggaagaaaatcccgg
agacaatagtggagcattcttttaactcctagaaaccaaatggttgtgggnangggagggagaaggagtg
aatcagacatgtttagcaacattcctnaagcgggagtcaaaagtaggctanctctacataattgcaaagc
cggctcaggagcccagcaccaatggctctcagttnttttatggattcttttaagaaatgctgcatcacca
acgctcttgangcacagaggacgatattgtgtggaaaaacacggacatcgatgactctgagtcgaaaagt
gattcagaagagttggactctgaatgtgaagaagttttaggaataccttaaccaatttatttcgcttata
ttttcctttttatgtatgcacaagagtgatatatgataaaaatctgtgtctaaataagtctaaaagagct
ctttcaataagtataaaataaaaattctaatgataaggaaagcattgtgtcatagtttaattggcagcgt
tttttctttcttagtggtacataaaataatggtgcgtcttacaatcgatggcatcttagattcgatgaaa
tacgg
>MER104C   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcatagctgttcatattgtcatcacttcaattgagttatgtgcattgttggtactaca
cgtgttgagtttaattgccatttaaaatgtcttcaaaaagattacactatgattcagcattgaaatgaaa
agttattgtgtacacagaaaggcacggaaacagagcagcggggcgtaaatttgatattagtgaagcaaat
attcgtcgttggaggaatgaccgcaattccatattttcttgcaaagcaacaaccaagtgctttatgggac
ctaagaaaggaagatacccacaagtagatgaagctgtgttacgttttgttnctgagatacgtgcaaaagg
attgcctatcacacgccaagcaatgcaactgaaggcaggagaaattgccnaatcccncggaatagatgaa
agaaatttcaaagcaanaagaggctggtgtgaccgattcatgcgtcgtgcaggactatcgttaaggcatc
gtgtcatagtttaattggcagcgttttttctttcttagtggtacataaaataatggtgcgtcttacaatc
gatggcatcttagattcgatgaaatacgg
>HSTC2   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcatagctgttcatattgtcatcacttcaattgagttatgtgcattgttggtactaca
cgtgttgagtttaattgccatttaaaatgtcttcaaaaagattacactatgattcagcattgaaatgaaa
agttattgtgtacacagaaaggcacggaaacagagcagcggggcgtaaatttgatattagtgaagcaaat
attcgtcgttggaggaatgaccgcaattccatattttcttgcaaagcaacaaccaagtgctttatgggac
ctaagaaaggaagatacccacaagtagatgaagctgtgttacgttttgttnctgagatacgtgcaaaagg
attgcctatcacacgccaagcaatgcaactgaaggcaggagaaattgccnaatcccncggaatagatgaa
agaaatttcaaagcaanaagaggctggtgtgaccgattcatgcgtcgtgcaggactatcgttaaggcatc
aaacatcaatttgtcagaaacttcctgctgactttgaacagaagctgcttaacttccagcaacacgtgat
tcaattgaggaaaaaacgaaactatgagtttagtcaaataggaaatgctgataaaacctcggtgttcttc
aacatgcctcaaaatnatactgtcaatgctaaaggtgctaaagagatcaagatcatgagcataggttatg
aaaagcancatatcactgtgangctgtgcataattgccaanggccaaaagttgttgccatatttaatttt
aaactacaaaataattccnaagaattcttccccaaagatgttatcgtttatctgcatgcttgcacatana
catgnagacatagacgttagncaaactgaagaagaaatgactcagtaatctggaacggatgtctaagagc
ccacataactcaccaagcgtataggttctcgatcgttttcagatgtgtatctgaacagtaaagaatangt
tcactgaaaagtgaattaggttggtgtgatccatnatgtagactccttcgcaagactccatcagcgaacc
atttgacacttttgaggaaggaatatgagtcctggttgttgtctgaaaaccttctgttganaccttctgg
taagatcaagaaagcgccagcatcaaaacttgcagaatgggtgtcagcggcttggaagaaaatcccggag
acaatagtggagcattcttttaactcctagaaaccaaatggttgtgggnangggagggagaaggagtgaa
tcagacatgtttagcaacattcctnaagcgggagtcaaaagtaggctanctctacataattgcaaagccg
gctcaggagcccagcaccaatggctctcagttnttttatggattcttttaagaaatgctgcatcaccaac
gctcttgangcacagaggacgatattgtgtggaaaaacacggacatcgatgactctgagtcgaaaagtga
ttcagaagagttggactctgaatgtgaagaagttttaggaataccttaaccaatttatttcgcttatatt
ttcctttttatgtatgcacaagagtgatatatgataaaaatctgtgtctaaataagtctaaaagagctct
ttcaataagtataaaataaaaattctaatgataaggaaagcattgtgtcatagtttaattggcagcgttt
tttctttcttagtggtacataaaataatggtgcgtcttacaatcgatggcatcttagattcgatgaaata
cgg
>LTR69   Long terminal repeat of an endogenous retrovirus - a consensus.
tgtagtatactataagagacatatcgtggctataagattaatgatagccataaggcccactcaaacatct
cgcagggccgacactacgtgtcacttagcagtatgatgcaacctggcctggggatttccaaccctggccc
ggggatttccaggtctctatgacaacgggacctaaaaaccctggttgccctagagacaaggccacctcag
cacagatgcaactttcataaaccttaaaacaaagcttacccttacaagaatagcttaaactccctttatg
aaagaaacacctggtaactgacccggactgaatacaggtataagaaagggggaagaatcccccaaactct
gagaatggtctccggatggagaccctcccggtcagtcggtcatctgacccctgactgtatctggcccatg
ccaccggcctgctcccgctatccgtcttgtaagagcgctgccagaataaactgcttgaacatcagacggt
gtctaagactcatctttgatgcgaatcgaaccgaaggggaaaagtcgcccctggggaagctggttaacta
ggaccacccaagacccccgaacacgaca
>L1M2B_5   Primate L1M2B_5 LINE1 repetitive element - a consensus.
tagaggcatctggcactcacctcctccacaaagaaggaccaaaatagcaagtagataatcacattttaaa
tagagcatctaagagagaacactggaattcagcagagaagtgacaggaaacatctgaggcatggaaggag
agggaagyaaagcagccagcccagccaggattggctcagagccaggagaggctccccagtgtggggaaag
ggtaagtgagagatccccagyrgtccacattcccaccacrgactcctgcaatcctagccacrggagagcc
cctcancccttncaggccctgagactagtatagggagctgcctggagtccatgtaatagcattgttccag
agagggagttcacactgggtcccacacaccccctgagacccaagcagctgcagcatggnaccattttgag
agccyagcccccaccagactacatcctgccctggggcccaatagcccctgcatctccacatccctggagc
cccactgacattcccccacatccacccaggagggctgcagtgttacaataccagctggacccagcagtgc
agcagggtccccagcactctagcccacacagtgtcctacaccccagggaataggcagtgcagtacaccag
ggaggctgcccctcnaccccccgccccccgccygacctaggacaaagggagccaaagggagccaaagcat
gcactccccagagcctgagagctgcctgcctggggctgctgccactgacagcaaccctgccccctccagc
agcagggctgctgtacacctgcatgtaccctgaggacaggctctccctacctactgctgctgccagtgca
aagtgtatgctccccagagcctgaggaccacctgcctggggctgctgccactgacagcaaccctgcccca
actctggccccagcagcagctgctgtacacntgcacgggccctgaggacaggctttccctacccactgcc
actacnyctgactctggggccaaagcacatgctccccagagcctgagagctgcctgcctgggctgctgcc
actgacagcaaccctgcccccacccccagcagcagggctgctgtgcacctgcatgcaccctgaggacagn
ctgcccttcccaccactgctgctgccacccngacccaagcactgccatccaggggcctgaggatcggcct
gccccacccaccacagccagtgcccatgtgcaccaccaggggggcctgaggacaggcctacccggcctgc
caccaccaccagtgcctgagcatgccatccaggggcctgaggattgccctgccccacccaccaccactgg
yrcccatgcacaccacccaggggcctgaggacaggcccacccagcctgctgccaccactaccactggcac
ccacctgcacatgccacctgggggcctggggactggcccgcccagcccaccacagccactgctagcacca
atatgtgccacttaggggcctgaggattggcccaccactgctactgccactgcccatgctatgcatacta
cccaggggcccgaggacctgcccacccagctggcctactactgccactgctagcacccaagcaagccacc
tggaggcctaagaactggcccgcctagacccgccaccaccagtgcccatgcatgccacctaggggcctaa
ggacaggcatgcctagcccaccactgccaccactggggcccaaggactggcccacctggtgtccctatcc
ccagcaaagccttnccacagcctccactaacaactacagcctaagccactgaggaamtcacagacaccac
tgatactgattnacagctgaagaaatcatatggagactacactactgcatccacccagaatcaaagccaa
agtaccctacccaaccaacactatagatacatctacaggaaaaaagtctttccctatgaaagccaathca
taaaattggaagaagtaactgttacaccagatghacagatatcaatgtaagganacaanangacacaaga
aacatgaaaaagcaaggaaayatgacayctccaaaggaacacaataattctccagtaacagattccaatg
aaaaaratatgaaatgcctgaaaaagaattcaaaataatgatattaaagaaactyagtgagatacaagag
aacacagataatacaaagaaatcagwaaaaaaacaattcakgatatgaatgagaaattcamcaaagagat
agatatcataaaaaagaaccaaacagaaatcctggaactgaagaattcaatgaatgaaataaaaanacat
atacaattgagagcttcaaaacaatagactagatcaagcagaagaaagaattttagaacttgaagayagg
tctttwgaaataacccagtcagacaaaaaagaaaaagaatttaaaaaataaacaaagcctaygtgacata
tgggacaccataaagtgancaaatatttaaattttgggtrttccagaaaaagaagagatggtcaaaggga
tagaaaacctatttaatgaaatwatagctgaaaamttcccaagtctwrcaagagatttagacatcnagat
ataggaagctcagaratccccaaatagatwcaanncaaaaaggtcttcttcaaggcacattatagtcaaa
ctgycraaagtcaaagacaaagagagaattctaaaancagcaagagaaaagtatcaagtcacwtataagg
raatccycatcagamyaacagtrgatttctcagcagaaaccttacaggccaggagagaatgggatgayat
attcaaagtgctgaaagaaanaaaagytgccaaccaagratactatacccagcaaagttatccttcataa
aaggagaaataaagtatttcycagayaagcaaaagctgagggaattcatcaccactagrccngccctaca
agaaatrcttaagggagtyytacayctggaagcaaaaggacaagtatctaccatcatgaaaacacatgaa
agtataaaactcactggtagadcagacacacaaatgagaaagagaaaggattcaaatgttahcactahag
aaaaccaccaaatcanaatgangaanaataaragagaaagtatanacaaaacaatnatanacaaaacaac
cagaaaacaattaacaaaatgacaggaataagtcctcacatatcaataataatcttnaatgtaaatggat
taanntttccacttaaaagatatagactgnct
>L1M2C_5   Primate L1M2C_5 LINE1 repetitive element - a consensus.
ggagagtgatgtcagcaagatggctgactagagatgcctggtgctcatccccccacaagaaaggaccaag
gcaataataaacagctaagatttgactggagtgtcaaagggagagtgctggagtgcagtggggagtggag
atgcacctgtggtgactggaagttgccacagcatggaggcacccagcctctgcagccccatctcccccac
ctggatcagatctgcctggagcaggagggacttcccattgcagggaaaaggtaagcagaagatccccacc
accccactgccaccacaaacacacagtccttacaacaggagaatcccacagtccttgcaagccctgagcc
cagtttggagagctgccggaattacacagctgcatgccctggattaggagcacaaggtgtgcactcccca
cccccagtgactcaagctgctgcagcacagccatcttgagaccagagccacctctggagtgtaccctcct
ctgggggcagtagccactgcacctctccagcactggggctccatcttcattacaccaagcccacacgggt
ggctgaagccacaaccccagctgtgtagagctgggcccaggattggctgtgactctggtcctgcacgcag
ggaaaccaactcccaccaccgcacttccagccagaggaacagtctgcagtcctacccagggtaaacctgc
ccttgagctagccaaactgctgcatgccctccccaagcaggagaggcccctaagcctctgagcagctgat
acaccccaggcagcagagtggctatgcgcccatgctcaggacctgagaaacagccctgcaggccccatcc
cctacagacatgcccctggcctgcccatgccctcccttaatagggcctgagaaacagccccacaggctac
ccctagcaggcacaccaccgagtgggccttgcacctgtctctcagacctgagagacaagcagctgtgtat
gcccatgtctcaggcctgagaaacaaccctggagctacctggtgggcaaacccccaggccagccaagcag
ccatgtacctgtatcccagcctgagaaacagcccataggccacccctagcagacatactcccaggccagc
taagcagctatgtgaccatgctgagcctgagaaatagccctgtagccactcccagcagacacacctccag
gccagcaagcagccatgagcccatgtcctgggcctgagaaacagccccatgggctacccctggcagacat
gcccccaggccagccgagcagccgtgtgcccaatcccggcctgagaaacagcccatgggccacccctggc
aggcaccacccaggccagccaagcagctgtgtgcccagtcccagctagaacagcctatggactaccccca
gcagacacacatccaggacagctgagaagctatgcctgttccaggcctgagaaacaccttcttggccagc
cctggcagagatgctctcagtccagccaagcagcatgcactatatattggcccatgagtttccccccagc
agactgccccaggccagccaagcagccttgcacccaatcccaggcctgagaaacagcccttaggccaccc
ctggcagacatgcctccaggccagccaagcagctgtggcccgcatcctgggcctgagaaacagccccgca
ggccacacctggcagtcatgcccggctgagcaaccacatccccatgctcctggccagagtaacagcccca
tggccaaccccagtgagccataccccaagttggctgacccaccgtgtgcatgcacacccctgacctgaga
aacagcccagtagcccacccctggcaaagctgcaccactgcaccacaaactctctcagcctaggccactg
agaactgcaaacgtcactagtgtggattacagctgaagaaactacatggagactacacttactgcatcca
cctagaaccaaagccaatacaccccaatgaactgacaccaagacccatttatacaaataagtttttccct
ataaacctactccataaaattggaagaggtacttttccaccagatgatagaaatcaatgtagggacacat
caaacatgaaaaagcaaggaaacatgacacctccaaaggaacacaataattctccagtaacagaccccaa
tcataaatatatgaaatgccagaaaaaataataatcttaaggaaactcagtgagataaagagaatacaga
tagacaattcaatgaaatcaggaaaacatgatttgaatgagaaattcaacaaagagatagatatcataaa
aagaaccaaatagaaatcctaagagctgaagaattcaatgaatgaaataaaaaatacaattgagagcttc
acagactagaccaagcagaagaaagaatttctgaacttgaagacaggtcttttgaaataacaggcagaca
aaaaagaataaaaaagaatgaagaaagcctacaggatttatgggacaccattaagtagatcaaatatttc
attatgggcattccagaaggagaagagtagagaaaaggtgaagaaaacatatttaataaaatagatgaaa
cttcccaagtcttgggagagagatggacatctagatccaggaagctcaaagaaccccaaatagattcaac
ccaaacattatagtcaaattgtcaaaagtcaaagacaaagaaattttaaaacagcaagagaaaagcatca
cacatataagggaatccccattagactaacagcagatttctcagcagaaaccttaggccaggagagaatg
ggatgatatattcaaagtactgaaagaaaaaaaatctgtagccaagaatattatacccagcaaagctatc
cttagaaatgaagaaataaaatctttcacagataagcaaaaactaaggaattcatcaccactagacggcc
ttacaagaaatgctaagggagtcttacatctggaagtaaaaagacaataaccaccatcatgaaaacatgc
aaaactataaaactcactggtaagccaatacacaaaggagaaagagaaaggaatcaaaccttatcactac
agaaaaccacccaactacaaaaataaacaataagaaaggaacaaagaatatacaaaacaaccagaaaaca
ataaaatgacagaagtaagtcctcacctatcaataataaccttgaatgtaaatagattaaattccccata
aagatatagactgctgaatagattaaaaaataagacccaactatatgctgcctacaagaaactcacctca
cctgtaaagacacacatagactgaaagtgaagggatggaaaaagatattccatgcaaatagaaaccaaaa
ggagcaggagtagctatacttatatcagacaaaacagacttcaagtcaaaaactataaaaagagacaaac
aaggcattatataataataaagggatcaattcagcaagagatataattgtaatatgtgtacaattgtaaa
tatatatgcacccaaacactagagcacccagatatataaagcaaatattattagatctaaagggagagat
agaccccaatacaataatagttgaggacttcaaccccactctcagcattggacagatcatctagacagaa
aatcaacaaagaaacatgatttaaactgcaccatagaccaaatggacctaaataacagacatttacagaa
catttcacccaacagctgcagaatacacattcttttcatcagcacatggaacattctccaggattgacca
tatgttaggacacaaaacaagtctcaacaaattttatcaagtatcttatctgaccacaatagaataaaac
tagaaatcaataacaagaggaacattcaaaactatacaaatatatggaaattaaacaacatgctcctgaa
tgacaatgagtgaagaagaaattaagaatgaaatttaaaaattccttgaaacaaatgaaaatagaaacac
aacataccaaaacgggaacagcaaaagcagttattaagaggcaagttt
>MER121   Interspersed repetitive element - a consensus
gcgttyggtaaaaatctcaaayyatttttcarrmrttggggtttggcaaaacccaaaatrcattttgcca
agcacttttttccccccttaatttttaaacccatgtgtatttcaagggaaatttaatccatatgtttctg
attcatttacacttaactcatcaaaatgttgttttgtaagagttatttgatgtccaagaagccttatgag
tctttttaatgactttttaaagccttttttcttttccttaaaaacaggaagtcatttttt
>LTR45C   Putative LTR from retroposon related to the MER4I-group.
tgttaccaagcaaaaggggcttrctgcctgatgygctagaagccaatactatgacactgggtttttgaga
aaagaaaagctttttattgcaagtcgactaacaaggagacaggagtccagctcaaatctgtctccctgtg
ctggctttaaggcagtaattttattagaaaaggtttagggggtggattctgggattagyaggtgattggt
ggaaggaaaggggaggtctggaaagtccttgggcatgcrcagttatctcttcatgctacctcatgggtcg
catgtgcaaattcagggggagttagtatgaaacatgcggtggaaattcaggctgtgacgtcagcaagctc
gttctgygcagactccagttggccatattggttccaaccgatttcagccagttttkttatctcacaagca
gagggagtttcagcatttcagcaagttgtttcttttcttatctgccatcctgcaaactcaagaatttctg
ttagtcattggtttctttaatttaaaaaactctttggggcacagtttca
>MER72B   MER4I-group.
tgagaaataaaaataaaatcctaagccccccaactgactgaatagaccccctcttgggccaaggggaccc
cagagaaaccttaaaaactgagttktccyggccatgatgggatgggaggtcagacatgcctcagtatgcc
ccttccttattaacctttaaccagaattctttcctaaggagtaagcagaaaccagctctggaaaacaaga
aatggatgactcattcctttatcgcctttagccaatcatctgaggccacgaccagactccccctccctct
ttgcagtttcgacatgacagctcaccagtttcacaatgcatcccttcctaaaaactgaccaccatctctg
gactggttttggcygacttanrgaggatgcacagtgagggttttcrtgtccycctctgcttcaccttttg
acatcagagggccaaaaactccaccctyagatcatgctaataccnccattttttgaacatgtgacccatg
aagaggcatgaagctcaattgcacatgtgcatgtttctcctttcataaatattcatgactcctcctatag
cttattaaatatgtatatttagccamcccattcagcataaattcctgttccttttacccctccctcaaag
tgctttgctctcagcttctgccagaggctatgcttcccagcctgtgggatggccagcctgcaggctgcaa
ccctttatgagaaataaagctctcctttccaaatttataaacctcatgattcttcagttgacatacca
>MER34C   Long terminal repeat of retrovirus-like element - a consensus.
tgtaggagaccagaatatgccaccccaaaatatgcctctttggcataaggattattttgagctgattatt
ttgagaaactgcagacacaggagaagctctgaaaacagagtagaagttacccttttgtaagggaaattta
catctataaaggaaatctccatttgtaagggtgtctccctctctgtaccaggaagagaaggatgactcta
aatcactagagactcttatcaatggagaaggcaccaacttaaatctgcataacaaaccttacccttgttt
accatgcttttcctggtcacctccccataactggccttccccacacccttctttctttgtttcagcggaa
gatggtnatttaagcctgaattctaagccacctctttgagatttactcatttctctgggtatctcccatg
tatacatgaggtatacatgttattaaacttctgtttgtttttctcttgttaatctgtcttttgttacagg
ggtctgtcccagctaagaactatgaagggtagagagaaaattatttttttcctcccctac
>MER50B   Primate MER50B repetitive element - a consensus.
tgttacaggtagttaggcatgagcggggcaggagagggctctccccccacccactagaaatgtcrggtga
tggttcggcaattatcrcattgcctctctaaaartgataaattggcagccagygccagggagaggccatt
tcctgatggtccacacctgttaacatyaaaatgttaattgaatgcagaccccagggagaagcaacttcct
gggcatgcacattaagagacaaaaatggcgaagtatgatcttccgggtacactctccaccrgaaaaggga
agaaagcctcagatgggcatgcgtataactccctaaacacactgcgcgtgctcaattcccaagggtaagg
agggcactgcgcatgcaggaagcccaccctaagggaagaatcatgggaaagaggcgagcctataaaagtc
ctaggatcaaggttaaacagggcactttttcttctctctttgaccttcaggtgcccacttgggtctcttc
caagcgmactttcctttctttcctgttctaaagcctttttaaataaacttccactcctgctctgaaactt
gcctcagtctctttttctgctttatgcccctcagtcraattctttcttctgaggaggcaagractgaagt
tgctgcagacccgtayggatatgccgcyggtaactcagggtaactcggatctcttccaccggtaaca
>LTR77   Long terminal repeat of retrovirus-like element - a consensus.
tgagagaggaggcagttagaggctggctaggcagatagagagggagggtcttgggagaaaaacaatgttc
acaggaacacccatgggacngcacctgcactgcctctgcagctagcaggaagaaatgtggttaagaactt
cctcttatgccaggatgtttgctcagaagggactgtcccaacttaggygcaggtgcaataaatcaaccta
aatgtccttaacttgacccagctcattatatcattaacatgacattagcattgtggttttagcccccatg
ggttttgcttaggcactcatgggtaataaccaagatggagtcactatggccaacccyaggcatgcgcaga
tgcaacacccctaggagggaactttacccctcccatttaggcaraacccacagaagacttccttgttttt
gccacataaaagatayacccagaactcagccccatttctggcaacctgctttcaggtcccctctctttgc
tgagagctttnctgttgcttaataaattctactctgccttactcactctctggtgtccacgtgccttatt
cttcttggttgtgggacaagaactcagaccttgctaaactaaggagtaagaagactgcaaca
>MER2B   Nonautonomous DNA transposon - a consensus.
cagtcatcccttggtatctatrggggattggttccaggaccccctcggataccaaaatctghggatgctc
aagtccctgatataaaatggcatartatttgcatataacctatgcacatcctcctgtatactttaaatca
tctctagattacttataatacctaatacaatgcctacacatcacttcattcacgtggattcaatgtagta
ctyggtgtatggcaaattcaagttttgctttttggaactttgtggaatttttttttccaaatatttttga
tccgcggttggttgaatccatagatgcagaacccatggatacagagggctgactg
>MER93B   Primate MER93 repetitive element - a consensus
tgttaaagtaaattaaaatggagaccaggcctgaagaatccctgagcagacaaagccagttaggcctcat
aagtgaccttaaccttgcttgatttgcaaacataagcaaaacttaacttgagctatttcttgtaaatgcc
tatattaaagaaaaacagaacttaagctcaaccaatcagaagcagccaacaaacttataattatataact
agggactttccaatgggatagaccaaataaggcaactgtataactgtaaccaatcaaatattttctttgc
tttacttctgtgttcatcctataaaagcctcccccttgcattccctcggtggagctcccgaaccacttct
ggtttggagctgcccaattcatgaattgctgtttgctcaaataaactctttaaaattttttattgtgcct
cagtttacctttttaaca
>MLT1A1   Mammalian long terminal repeat (MLT1A1 subfamily) - a consensus.
tgctatggtttgaatgtttttgtcccctccaaaattcatgtgttgaaacttaatkgccaatgtracagta
ttaagaggtggggccttttargaggtgattaggtcatgagggctcctccctcatgaatgggattaatgcc
cttataaaaagggcttgatggagtgggttctctctctctctctcttctgctcttctgccatgtgaggaca
cagygttcctcccctctagaggatgcagcatwcaaggygccatcttggaagcagagascaggccctcacc
agacaccaaacctgctggnaccttgatcttggacttcccagcctccagaactgtgagaaataaatttctg
ttctttataaattacccagtctcaggtattttgttatagcagcacaaatggactaagaca
>BLACKJACK   BLACKJACK is an ancient DNA transposon - a partial consensus.
ctgcagaaggtgcatttacatatcactctatgaagcaagacttttcatttagatcaaatgactgttcttc
taaattaattttgcttatttttaatttcaagttttcttgtgcatatatgaaaagtgaagcgatagcttta
atgtgttggcttcattagcagaagaaaactttrcaaacagttaaatgatgccagttttatatcagtgtca
tcagatgcttcaaatagaaaatcagttaattccaataacggtttattttttttcatccaattcatggaat
caaagtaaagcttttggaagttcattctgtcgaaggtaaaacatctgacattattgtgaatgctattgta
aattcagttaaaaagttcaacattgaagataaaattatttgtttttgtagtgataatacaaattttgtca
tggtaaaaacaatgttcttactaaattaagaaacctatggagcagaaatgtacttggaattggttgtggt
acacacataattcataattgcatccaaacaagctgcgatattctacccaacgatatagaagctgtagttg
tcaaaatttacaaatatttatatatacacaattagaaaaattacaaaatttttgtgacgaagctgatatt
aaatacaaaaaatacttcagcatggcagtatattctttctcttttctgcctgtcatcatcaatcggattt
tagaaatgtttgagcctttgaagaactactttgtaaatcaacctaagtgtcctacaatggtattrtaaat
aagtcctctaaattttggttgcattttgttcaaaatcagttggaaatctttaatcaaagtattcaacgaa
cgaagcaccaaaaaacttcagcttttgaagcttttagcaaattgcaattattgaaaacaaagcttgcaaa
caggaagacattgaaatttatccctacaaaagcaagggaggaactgaacaaattaaacgatgagagctca
aacggtgtacaagatttaattttgaaattctataattgtgctttggaatatctcgacttgtgggaagaat
cttttgatggagctcctatttttaattggataaatttatattctgtaccagaatggaatgaaattgagaa
ggcctacaattttgcagcatctaaatttggcgaaacattcaaaagaatcataaatagagaaacttatttg
acgagttttgtcttgtaaaaatatttgttaaagaaaggtactctgaatggaggcaaaaagacagtacctg
tgaaaatatttgggctgaaatatttacacatttcaatataaaaaaaattagattgagaatatcctccatt
tagcagaatttgctctgagcttaccaggtacctcagcacctgtagagagaatattttctcaattaaaaat
attatggtctacagagaagagtcaattgaagatgtcaacaatttcaaatttattaaccataaaatgcaac
tttgaagaagattgcaggcaattttatgaaaaaaattaaaaaaaatacattcttcagaaaaataccagtg
acatggattagagacagatacggctaagaaactgattaaagtatgtgaaaaataattacttatgttatta
ttttttaatattcagataatcaatataagattttttaaatttaatgtacatggacatatgtttttaattt
ttaaaaattttatttttgaaaatattttgaatagaactattttataggtccaccataatattaaaataaa
tttgttagtcatataatttaattatttttagtaccccttttcactctcaaaagtgtcccagtttggatga
taaattatatggtcatccta
>MLT1E1A   LTR from retrotransposable MaLR element - a consensus.
tgggcagaattctaagatggcccccaagattcccacctcctggtrttcatgccttgtataatcccctccc
cttgagtgtgggtaggacctgtgaatatgatggatatcactcttgtgactatgttatagtatatggcatg
aagggattttgcagatgtaattaattttgcagatgtaataggtccctaatcagttgactttgagttaatc
aaaagggagattatcctgggtgggcctgacctaatcaggtgagcccttaaaaaagncntctaaatccgtc
tngaaagagaagaactaagagagattctcctgctggccttgaagaagtaagctgccatgttgtgangagg
gtctgtgaagagggccacgtggcaaggacctgagggtggcctctaggagctgagagcaatccctggccag
ccaacagccagcaagaaaatagggacctcagtcmtacagctgcaaggaamtgaattctgccaacaacctg
aatgagcttggaagaggattctaagcctcagatgagaacacagccctagccaacaccttgatttcagcct
tgtgagaccctgagcagaggacccagctaagctgtgcccagactcctgacccacagaaactgtgagataa
taaatgtgtgttgttttaagccactaagtttgtggtaatttgttatgcagcaatagaaaactaataca
>STR47   Common vole STR47 tandemly repeated sequence - a consensus.
gtattgttttgtgatttggagctagtgtggagaactgttgcagaaag
>ZOMBI_A   transposon - a consensus.
caggttgagcatcccaaatccgaaaatccgaaatccgaaatgctccaaaatccgaaactttttgagcgcc
gacatgacgctcaaaggaaatgctcattggagcgttttggatttcggattttcagatttgggatgctcaa
ccggtaagtataatgcaaatattccaaaatccaaaaatccgaaatccgaaacacttctggtcccaagcat
tttggataagggatactcaacctg
>ORR1AI   MaLR retrovirus-like internal sequence.
gaagttggtaccagggactggggtattgctgtgataggcctgaccatgcttttatttgaaagaatgtgga
ttttgggactttggatttggaaagcagtggaatgctttaaatggggcttaatgggtcatcctagtaggaa
tatggaagactttgttgctgggagtaatttgaactgtgttgacctggcccaagagatttcaaaggagaag
aatttcagaatgtggcataaagactgtttttgtggtattttggtgaagaatgtggctactttttgccctt
gtctgaaaagtctgcctgaggctaaggtgaagagactcagattaattgcattgacaaaggaagtttcaaa
aaagctcagcagagactttgttctctggttaagtcttatgaagagaagtttgaacaagcatagcaagctt
agaaaggaaaaatataaaatatatggttcgagtattaaaggggtaccaggaagtgaaatagagcaaaatc
ctgtgttctaggagataacagattaagggagtgggaccttggggcaagatcctacccagctaaatttaga
tccaxxxxxxxxxxtacacacctttaatcccaggagacaggcatgctgatctctgcattcaaggtcaatc
tacagagcaagacxxxxxxxxxxcaagcttaggcagtgaaggatttggaaaacagaaagccagtgacaat
gtaatagtacaagagggtcatgttctagttcctgcaagcagcagaactcggcagcttcagccatgtggct
ctggctctagagttaagaatggaaggaactactgggacaattgatgctggttagctggagctaagaaatt
agcaatgattatgaagagaccagcatcactgaggtgaaatcttctgggaagtgttttctgggagcacaaa
gaagctgtgttccagagatagccaaggttgtacctcgtgctgcagctggacttggtaatgtgtaagaatc
acccaggtggtactggttttgaaggcatgaaggggtcatgaagaacagctgaggcttggcactgtgagag
gtcatggaaggccattggagaaggtatagcctcagctgtagttgatggcccaggactgaaggggtcatgc
aaaggatttgaggcttggcaccatgaagagagcctatgagaggctattggtgaagcctagttggagtgga
acaccccagtgtattggagatgtcagtaccatgggatgatcaccaagaacagcagccgtagtggagtgga
tcaacctgagcttagagtgctacagagggcagagctggagaagtgatgccagcccttaggaggagtccaa
aagatcaagtggaatcccagacactgaaacaagaagctgtaacattgaaattgccttggagactcaaaga
tgttaaagatgccagagccatgggatacatgctgaggaaagctgctaacagggagtggaaccagcccagg
agaaagcagtttgttgcagtcaacaaagatgaaaaaggagtggagatctgaagactgctttgacatcagc
catggagatgcagagtttggagtttgcccagctggtttcctgccttgctttggggattacagttaattag
ttggatgaatctcagaagagaccttgaactttggacttttaacattgttgagactgctatagactatgag
gactttgaaagttggactaaatgcattttgcattatgctatgtttaagtatggcccccatagactcatgt
ttttgaacaagtctatggggrccagggagtggaa
