>ALU   Human ALU interspersed repetitive sequence - a consensus.
ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggaggatcacttgagc
ccaggagttcgagaccagcctgggcaacatagtgaaaccccgtctctacaaaaaatacaaaaattagccg
ggcgtggtggcgcgcgcctgtagtcccagctactcgggaggctgaggcaggaggatcgcttgagcccggg
aggtcgaggctgcagtgagccgtgatcgcgccactgcactccagcctgggcgacagagcgagaccctgtc
tcaaaaaaaa
>MIR   Mammalian-wide interspersed repeat (MIR) - a consensus.
acagyayagcatagtggttaagagcacggrctctggagccagactgcctgggttcgaatcccggctctgc
cacttactagctgtgtgaccttgggcaagttacttaacctctctgtgcctcagtttcctcatctgtaaaa
tggggataataatagtacctacctcatagggttgttgtgaggattaaatgagttaatayatgtaaagcgc
ttagaacagtgcctggcacatagtaagcgctcaataaatgttrgytattatt
>L1PA2   3'-end of L1 repeat (subfamily L1PA2) - a consensus.
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatg
ctcatcatcactggccatcagagaaatgcaaatcaaaaccacwatgagataccatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttac
actgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctaga
actagaaataccatttgacccagccatcccattactgggtatatacccaaatgactataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcattattcacaatagcaaagacttggaaccaaccca
aatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaatgatgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctcagtaaacta
tcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatg
gacacaggaaggggaatatcacactctggggactgtggtggggtggggggaggggggagggatagcattg
ggagatatacctaatgctagatgacgagttagtgggtgcagcgcaccagcatggcacatgtatacatatg
taactaacctgcacaatgtgcacatgtaccctaaaacttaaagtataataaaaaaaaaaaaa
>L1PA7   3'-end of L1 repeat (subfamily L1PA7) - a consensus.
ctaatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggatatgaacagacacttctcaaaagaagacatttatgcggccaacaaacatatgaaaaaaag
ctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccatctcacgccagttaga
atggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaacgcttttac
actgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctac
tataaagacacatgcacacgtatgtttattgcagcactgttcacaatagcaaagacttggaaccaaccca
aatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaaggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaacta
acacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgaacaatgagaacacatg
gacacagggaggggaacatcacacaccggggcctgtcggggggtggggggctaggggagggatagcatta
ggagaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcacgtgtatacctatgt
aacaaacctgcacgttctgcacatgtatcccagaacttaaagtataataataaaaaaaaaa
>L1PA11   3'-end of L1 repeat (subfamily L1PA11) - a consensus.
ctaatatccagcatctacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccattaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatacatgtggccaacaaacatatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacgccagtcaga
atggctattattaaaaagtcaaaaaacaacagatgctggcgaggttgtggagaaaaaggaacgcttttac
actgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaagacctaga
ggcagaaataccatttgacccagcaatcccattactgggtatatacccaaaggaatataaatcattctat
tataaagatacatgcacgcgtatgttcactgcagcactattcacaatagcaaagacatggaatcaaccta
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaggaacgagatcatgtcctttgcagggacatggatggagctggaagccattatcctcagcaaacta
acgcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctgaatgatgagaacacatg
gacacatggwggggaacaacacacactggggcctgtcggagggtggggggtgggaggagggagagcatca
ggaagaatagctaatggatgctgggcttaatacctaggtgatgggatgatctgtgcagcaaaccaccatg
gcacacgtttacctatgtaacaaacctgcacatcctgcacatgtacccctgaacttaaaataaaagttga
aaaaaaaaaaa
>L1PA15   3'-end of L1 repeat (subfamily L1PA15) - a consensus.
ctaatatccagaatctataaggaacttaaacaaattaacaagcaaaaaacaaacaaccccattaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatacacgtggccaacaagcatatgaaaaaatg
ctcaacatcactaatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagtcaga
atggctattattaaaaagtcaaaaaataacagatgctggcgaggttgcggagaaaagggaacgcttatac
actgctggtgggaatgtaaattagttcagccattgtggaaagcagtttggcgatttctcaaagaacttaa
aacagaactaccattcgacccagcaatcccattattgggtatatacccaaaggaatataaatcattctac
cataaagacacatgcacgcgtatgttcatcgcagcactattcacaatagcaaagacatggaatcaaccta
aatgcccatcaacggtagactggataaagaaaatgtggtacatatacaccatggaatactacgcagccat
aaaaaagaacgagatcatgtcctttgcagcaacatggatggagctggaggccattatcctaagcgaacta
acgcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaacattgagtacacatg
gacacaaagaagggaacaacagacaccggggcctacttgagggtggagggtgggaggagggtgaggatcg
aaaaactacctatcgggtactatgcttattacctgggtgacgaaataatctgtacaccaaacccccgtga
cacgcaatttacctatataacaaacctgcacatgtacccctgaacctaaaataaaagttaaaaaaaaaaa
aa
>L1PB1   3'-end of L1 repeat (subfamily L1PB1) - a consensus.
ctaatatccagaatctacaaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaatagacaattctcaaaagaagatatacaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcgataccaccttactcctgcaaga
atggccataatcaaaaaatnaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttctac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtgtggagattccttaaagaactaaa
agtagatctaccatttgatccagcaatcccactactgggtatctacccagaggaaaagaagtcattatac
gaaaaagatacttgcacacgcatgtttatagcagcacaattcgcaattgcaaaaatatggaaccagccca
aatgcccatcaatcaatgagtggataaagaaaatgtggtatatatataccatggaatactactcagccat
aaaaaggaacgaaataatggcattcgcagcaacctggatggaattggagaccattattctaagtgaagta
actcaggaatggaaaaccaaacatcgtatgttctcactcataagtgggagctaagctatgaggatgcaaa
ggcataagaatgatacaatggactttggggactcgggggaaagggtgggaggggggtgagggataaaaga
ctacacattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaag
aacttattcatgtaaccaaacaccacctgttccccaaaaacctattgaaataaaaaaa
>L1PB3   3'-end of L1 repeat (subfamily L1PB3) - a consensus.
ctaatatccagaatctacaaggaactcaaacaaatcagcaagaaaaaagcaaataatcccatcaaaaagt
gggcaaatgacatgaacagacatttctcaaaagaagatatacaaatggccaacaaacatatgaaaaaatg
ctcaacatcactaatcatcagggaaatgcaaattaaaaccacaatgagataccaccttaccccagccaga
atggccattattaaaaagtcaaaaaacaatagatgttggcgcggatgtggtgaaaagggaacacttatac
actgctggtgggaatgtaaattagtacaacctctatggaaaacagtatggagatttctcaaagaactaaa
agtagatctaccattcgatccagcaatcccactactgggtatctacccaaaggaaaagaagtcattatat
caaaaagacacctgcacgcgtatgtttatcgcagcacaattcacaattgcaaagatatggaatcaaccta
agtgcccatcaaccgatgagtggataaagaaaatgtggtatatatacaccatggaatactactcagccat
aaaaaagaacgaaataatgtcttttgcagcaacttggatggaactggaggccattatcctaagtgaagta
actcaggaatggaaaaccaaataccgcatgttctcacttataagtgggagctaagctatgggtacgcaaa
ggcatacagagtggtataatggacattggagactcagaagnggggagggtgggaggggggtgagggatga
aaaactacctattgggtacaatgtacactactcgggtgatgggtgcactaaaatcccagacttcaccact
atacaattcatccatgtaaccaaaaaccacttgtacccctaaagctattgaaataaaaaaa
>L1MA2   3'-end of L1 repeat (subfamily L1MA2) - a consensus.
ttaataaccagaatatataaggagctcaaacaactctataggaaaaaatctaataatccgattaaaaaat
gggcaaaagatttgaatagacatttctcaaaagaagacatacaaatggcaaacaggcatatgaaaaggtg
ctcaacatcactgatcatcagagaaatgcaaatcaaaactacaatgagatatcatctcaccccagttaaa
atggcttatatccaaaagacaggcaataacaaatgctggcgaggatgtggagaaaagggaaccctcgtac
actgttggtgggaatgtaaattagtacaaccactatggagaacagtttggaggttcctcaaaaaactaaa
aatagagctaccatatgatccagcaatcccactgctgggtatatacccaaaagaaaggaaatcagtatat
cgaagagatatctgcactcccatgtttgttgcagcactgttcacaatagccaagatttggaagcaaccta
agtgtccatcaacagatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgagatcctgtcatttgcaacaacatggatggaactggaggtcattatgttaagtgaaata
agccaggcacagaaagacaaacatcgcatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtggggggttggtggggag
gtggggatggttaatgggtacaaaaaaatagttagaaagaatgaataagacctagtatttgatagcacaa
cagggtgactatagtcaataataatttaattgtacatttwaaaataactaaaagagtataattggattgt
ttgtaacacaaaggataaatgcttgaggggatggataccccattttccatgatgtgattattacacattg
catgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaattaaa
a
>L1MA5   3'-end of L1 repeat (subfamily L1MA5) - a consensus.
ttaatatccagaatatacaaggaactcaaacaactcaacagcaaaaaaacaaataatccgattaaaaaat
gggcaaaggatctgaatagacatttctcaaaagaagacatacaaatggccaacaggtatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcatctcaccccagttaga
atggctattatcaaaaagacaaaaaataacaaatgctggcgaggatgcggagaaaagggaactcttatac
actgttggtgggaatgtaaattagtacagccattatggaaaacagtatggaggttcctcaaaaaactaaa
aatagaactaccatatgatccagcaatcccactactgggtatntatccaaaggaaaggaaatcagtatgt
cgaagagatatctgcactcccatgtttattgcagcactattcacaatagccaagatatggaatcaaccta
agtgtccatcaacagatgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgcggcaacatggatgagcctggaggacattatgttaagtgaaata
agccaggcacagaaagacaaataccgcatgttctcactcatatgtggaagctaaaaaagttgatctcata
gaagtagagagtagaatagtggttactagaggctgggaagggtagggggagggggggatagggagaggtt
ggttaatggatacaaaattacagctagataggaggaataagttctagtgttctatagcactgtagggtga
ctatagttaacaataatttattgtatattttcaaatagctagaagagaggattttgaatgttcccaacac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacattgtatac
atgtatcgaaatatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaataaaa
>L1MA9   3'-end of L1 repeat (subfamily L1MA9) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaatagcaaaaaaacaaataacccgattaaaaaat
gggcaaaggacctgaatagacatttctcaaaagaagacatacaaatggccaacaggtatatgaaaagatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaagataacaagtgttggcgaggatgtggagaaaagggaacccttgtac
actgttggtgggaatgtaaattggtacagccattatggaaaacagtatggaggttcctcaaaaaattaaa
aatagaactaccatatgatccagcaatcccacttctgggtatatatccaaaggaaatgaaatcagtatct
cgaagagatatctgcactcccatgttcattgcagcattattcacaatagccaagatatggaawcaaccta
agtgtccatcgacggatgaatggataaagaaaatgtggtatatatacacaatggaatattattcagcctt
aaaaaagaaggaaatcctgccatttgtgacaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgatctcacttatatgtggaatctaaaaaagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctggggggtgggggaaatggggagatgttggtcaaagg
gtacaaagtttcagttatgcaggatgaataagttctggagatctaatgtacagcatggtgactatagtta
ataatactgtattgtatacttgaaatttgctaagagagtagatcttaagtgttctcaccacacacaaaaa
aatggtaactatgtgaggtgatggatatgttaattagcttgattgtggtaatcatttcacaatgtatacg
tatatcaaaacatcacgttgtacaccttaaatatatacaatttttatttgtcaattatacctcaataaag
ctggaaaaa
>THE1B   Long terminal repeat (THE1B subfamily) - a consensus.
tgatatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacgtgtcg
tgggagggacccggtgggaggtaattgaatcatgggggcgggtctttcccgtgctgttctcgtgatagtg
aataagtctcacgagatctgatggttttataaaggggagttcccctgcacawgctctcttgcctgccgcc
atgtaagacgtgmctttgctcctccttcgccttccgccatgattgtgaggcctccccagccatgtggaac
tgtgagtccattaaacctctttcctttataaattacccagtctcgggtatgtctttattagcagcgtgag
aacagactaataca
>MSTA   Long terminal repeat (MSTA subfamily) - a consensus.
tgatatggtttggatctgtgtccccacccaaatctcatgttgaattgtaatccccagtgttggaggtggg
gcctggtgggaggtgattggatcatgggggtggatttctcatgaatggtttagcaccatccccttggtgc
tgtcctcgtgatagtgagtgagttctcgtgagatctggttgtttaaaagtgtgtggcacctcccccctcg
ctctctcttgctcctgctctggccatgtgacgtgcctgctcccccttcgccttccgccatgattgtaagt
ttcctgaggcctccccagaagccgagcagatgccagcaccatgcttcctgtacagcctgcagaaccgtga
gccaattaaacctcttttctttataaattacccagtctcaggtatttctttatagcaatgcgagaacgga
ctaataca
>MSTC   Long terminal repeat (MSTC subfamily) - a consensus.
tgctatggtttgaatgtttgtcccctccaaaactcatgttgaaacttaatccccaatgtggcagtattga
gaggtggggcctttaagaggtgattgggtcatgagggctctgccctcatgaatggattaatccattcatg
gattaatggattaatggattaatgggttatcatgggagtgggactggtggctttataagaagaggaagag
agacctgagctagcatgctcagccccctcgccatgtgatgccctgcgccaccttgggactctgcagagag
tccccaccagcaagaaggccctcaccagatgcggcccctcgaccttggacttcccagcctccagaactgt
aagaaataaatttcttttctttataaattacccagtctcaggtattctgttataagcaacagaaaatgga
ctaagaca
>MLT1A   Mammalian long terminal repeat (MLT1A subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>MLT1B   Mammalian long terminal repeat (MLT1B subfamily) - a consensus.
tgttatgggctgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gactgtatttggagatagggtctttaaagaggtaattaagttaaaatgaggtcattagggtgggccctaa
tccaatatgactggtgtccttataagaagaggagattaggacacagacacacacagagggaagaccatgt
gaagacacagggagaagacggccatctacaagccaaggagagaggcctcagaagaaaccaaccctgccga
caccttgatctcggacttccagcctccagaactgtgagaaaataaatttctgttgtttaagccacccagt
ctgtggtactttgttatggcagccctagcaaactaataca
>MLT1C   Mammalian long terminal repeat (MLT1C subfamily) - a consensus.
tgttatgggttgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gaccttatttggaaatagggtcgttgcagatgtaattagttaagatgaggtcatactggagtagggtggg
cccctaatccaatatgactggtgtccttataaaaaggggaaatttggacacagacacgcacacagggaga
acgccatgtgaagatgaaggcagagattggggtgatgcntctacaagccaaggaacgccaaagattgcca
gcaaaccaccagaagctaggggagaggcatggaacagattctccctcacagccctcagaaggaaccaacc
ctgccgacaccttgatctcggacttctagcctccagaactgtgagacaataaatttctgttgtttaagcc
acccagtttgtggtactttgttacggcagccctagnaaactaataca
>MLT1D   Mammalian long terminal repeat (MLT1D subfamily) - a consensus.
tgtggtaggcwgaataatggccccccaaagatgtccacgtcctaatccccggaacctgtgaatatgttac
cttacatggcaaaagggactttgcagatgtgattaagttaaggatcttgagatggggagattatcctgga
ttatccgggtgggcccaatgtaatcacaagggtccttataagagggaggcaggagggtcagagtcagaga
aggagatgtgacgacggaagcagaggtcggagtgacgacgttgctggctttgaagatggaggaaggggcc
acgagccaaggaatgcgggcggcctctagaagctggaaaaggcaaggaaacggattctcccctagagcct
ccagaaggaacgcagccctgccgacaccttgattttagcccagtgagacccatttcggacttctgacctc
cagaactgtaagataataaatttgtgttgttttaagccactaagtttgtggtaatttgttacagcagcaa
taggaaactaataca
>MLT1E   Mammalian long terminal repeat (MLT1E subfamily) - a consensus.
tgtggcagacagactctaaggtggcccccatgatccccgcctcctggtgttcacgcccttgtgtaatccc
ctccccttgagtgtgggtgggacctgtgacttgcttctaaccaacagaatatggcaaaggtgatgggatg
tcactcctgtgattacgttacatgattatgtaagattccgtcttgncgncantcttgctgagagnctctc
ttgctggctttgaagaagcaagcngccatgttgtgagnngccanatgagagggccacatggcaagggcct
ctaggagctgagggcggcctccagccgacagccagcaagaagctgaggccctcagtccnacagccgcaag
gaactgaattctgccaacaaccnnagtgagcttggaagcggatccttccccagtcgagcctccagatgag
ancncagccctggctgacaccttgattgcagccttgtgagaccctgaagcagaggacccagctaagctgt
gcccggactcctgacccacagaaactgtgagataataaatgtgtgttgttttaagccgctaagtttgtgg
taatttgttacgcagcaataganaactaataca
>MLT1F   Mammalian long terminal repeat (MLT1F subfamily) - a consensus.
tgtggtagccagcctccaagatggcccccaatgatccctgcctcctggtattcacgcccttgtgtagtcc
cctcccacattgaatagggctgacctgtgtgaccaatagaatatngcggaaatgatggtgtgtgacttcc
gaggctaggtcataaaagacattgcggcttctgccttgctctctttggatcactcgctctgggggaagcc
agctgccatgttatgaggacactcaagcagccctgtggagaggtccacgtggcgaggaactgaggcctcc
tgccaacagccagcaccaacttgccagccatgtgagtgagccatcttggaagcggatcctccagccccag
tcaagccttcagatgactgcagccccggccgacatcttgactgcaacctcatgagagaccctgagccaga
accacccagctaagccgctcccaaattcctgacccacagaaactgtgagataataaatgtttattgtttt
aagccactaagttttggggtaatttgttacgcagcaatagataactaataca
>THE1BR   THE-1B Mammalian LTR retrotransposon internal sequence - a consensus.
gtaaattggtaccagtagagtggggcgctgctgaaaagatacccgaaaatgtggaagcgactttggaact
gggtaacaggcagaggttggaacagtttggagggctcagaagaagacaggaaaatgtgggaaagtttgga
acttcctagagacttgttgaatggctttgaccaaaatgctgatagtgatatggacaataaagtccaggct
gaggtggtctcagatggagatgaggaacttgttgggaactggagcaaaggtgactcttgttatgttttag
caaagagactggcggcattttgcccctgccctagagatttgtggaactttgaacttgagagagatgattt
agggtatctggcggaagaaatttctaagcagcaaagcgttcaagaggtgacttgggtgctgttaaaggca
ttcagttttaaaagggaagcagagcataaaagttcggaaaatttgcagcctgacaatgcgatagaaaaga
aaatcccattttctgaggagaaattcaagccggctgcagaaatttgcataagtaacgaggagccgaatgt
taatccccaagacaatggggaaaatgtctccagggcatgtcagagatcttcgcggcagcccctcccatca
caggcccggaggcctaggaggaaaaaatggtttcgtgggccaggcccagggtccccgtgctgtgtgcagc
ctagggacttggtgccctgcgtcccagccgctccagccatggctaaaaggggccaacgtacagctcgggc
cgtggcttcagagggtgcaagccccaagccttggcagcttccacgtggtgttgagcctgcgggtgcacag
aagtcaagaattgaggtttgggaacctccgcctagatttcagaggatgtatggaaacgcctggatgtcca
ggcagaagtttgctgcaggggcggggccctcatggagaacctctgctagggcagtgcggaagggaaatgt
ggggtcggagcccccacacagagtccctactggggcactgcctagtggagctgtgagaagagggccaccg
tcctccagaccccagaatggtagatccaccgacagcttgcaccgtgcgcctggaaaagccgcagacactc
aacgccagcccgtgaaagcagccaggagggaggctgtaccctgcaaagccacaggggcggagctgcccaa
gaccatgggaacccacctcttgcatcagcgtgacctggatgtgagacatggagtcaaaggagatcatttt
ggagctttaagatttgactgccccgctggatttcggacttgcatggggcctgtagcccctttgttttggc
caatttctcccatttggaatggctgtatttacccaatgcctgtacccccattgtatctaggaagtaacta
acttgcttttgattttacaggctcataggcggaagggacttgccttgtctcagatgagactttggactgt
ggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggttttga
aatgtgaggacatgagatttgggaggggccaggggcggaa
>MSTAR   MSTa- LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>MLT1R   MLT1- LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MLT2A1   Interspersed repeat MLT2A1 - a consensus.
tgtgatggttaatactgagtgtcaacttgattggattgaaggatacaaagtattgatcctgggtgtgtct
gtgagggtgttgccaaaggaggttaacattggactcagtgggctggggagaggcagacccacccttaatc
tgrgtgggcgcmatcyaatcagctgccagcgtggctagaatataaagcaggcagaaaaatgtgaaaagag
agactggcctagcctcccagcctacatctttctcccgtgctggatgcttcctgcccttgaacatcagact
ccaagttcttcagttttgggactcggactggctctccttgctcctcagcttgcagacggcctattgtggg
accttgtgatcgtgtgagttaatacttaataaactcccctttatatatatctattcyattagttctgtcc
ctctagagaaccctgactaataca
>MLT2B2   Interspersed repeat MLT2B2 - a consensus.
tgtgatggttaattttatgtgtcaacttgactgggctaargggtgcccagatagctggttaaacattatt
tctgggtgtgtctgtgagggtgtttccagatgagattagcatttgaatcagcggactgagtaaagaagat
tgccctcaccaatgtgggcgggcatcatccaatccgttgagggcctgratagaacaaaaaggcagaggaa
gggtgaatttgctctctctccttgagctgggacatccatcttctcctgcccttggacattagaactccag
gttctcgggccttcggactycgggacttgcaccagcagccccccagattctcaggccttcggactcggac
tgaryyacgccaccggcttccctggttctccagcttgcagacggcatatcgtgggacttctcagcctcca
taatcacgtgagccaattcccctaataaatcycytctatccatcctattggttctgtctctctggagaac
cctgactaataca
>MLT2C2   Interspersed repeat MLT2C2 - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacaycagtct
agatgttgctgtgaaggtattttrtagatgtgattaacatttayagtcagttgactttaagtaaaggaga
ttaccctccataatgtgggtgggcctcatccaatcagttgaaggccttaagagcaaagactgaggtttcc
cgaggaagaagaaattctgcctcaagactgcaacgtggaaatcctgctgntttwccagcctccaagcctt
cggactcgaactgcaacatcarctcttscctgggtctccagcctgccggcctaccctgcagatttcggac
ttgccagcctccacaatcgcgtgagccaattccttaaaataaatctctctctacacacaccctattggtt
ctgtttctctggagaaccctgactaataca
>MLT2D   Interspersed repeat MLT2D - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacattagtct
gggtgtttctgtgaaggttattttttggatgagattaacatttaaatcggtagactgagtaaagcagatt
accctccctaatgtgggtggacctcatctaatcagttgaaggcctgaatggaaaaaaagggctgaccctc
ccccaagtaagaggaaattctgcctgcctgatngtcttcgaactggaatatcagctctgcggattttgga
cttgccagcctccataattgcatgagccaattccttataataaatctatctactctctctacacacaccc
tattggttctgtttctctggagaaccctgactaataca
>LTR2   LTR from human endogenous retrovirus (4-14), 3' long terminal repeat.
taaggaaggagaccacctctcccattgtctcctgtttcatgagaaagcaaaaagttaaaaaaagaagcag
aagtgagatcaatggccagatggtttagtgccaagaaccaggcctggtagttaaacatcaactcctgacc
taaccgcttgtgctatccatagattccagatattgtatgaggaagacttgtgaaactttctgttctgttc
tgctagcccccatcactgatgcatgtagctctcagtcatgtagcccccacttgcacaatgtatcatgacc
ctttcacgtggacccctcagagttgtaagctcttaaaagggacaggaatctttactttggggagctcgga
tcttgagacgcgagtctaccaatgctcccagctgattaaagcctcttccttcatagaaccggtgtctaag
aggttttgtctgtgactgttcctgctaca
>LTR3   LTR from human DNA related to mouse mammary tumor virus (MMTV) 3' LTR.
tgttgggagctgaaagmctgagggtcgtgaccaactcagcattccactggaggctatatgatcaaacagc
aaactgtttmtcatgaatgcaggatgtgggcaaactcgcatctgcncctgccaccagaaggtatgctgag
ggcagtcactccctggcgccagtgctccttgaggttatctactggaacatctggagcctgctgttcaaag
aawgcagtcatgcgggcctgcgntaaatcaagcagctgaccgacaaccacccccttctccctatcccctc
tacccaataaatacgaagggctgtagaagctcagggcccttgttcactagaagcaaggagccccctgacc
ccttcttccaaacatactcttttgtctttgtctttattcccgcgtttgtcctcctttgttcagtccaaca
gggwctgcggca
>LTR4   LTR from human endogenous retrovirus ERV3 - a consensus sequence.
tgaagcaggagatataaaaaaaaagaaagagagaaaaacaagttttctgtactgggctgactcactccaa
ggcccagcgataggcagggctctgncagggctttgatagcactatctgcagagccggggcccagaaggaa
tgggctccagagcctctccctgccgtcctagagcagggatgagaaaaacaagttcttcttatcagtttcc
ccctttgaaattctttccccataccattattcctttgttctgctctcataactatttttgtaactatttc
tgcaagtttgcaaggattttgtaagttcctgttttcccatctgtgcagtatggcgaaggtcacaagacat
gcctgagttgcaaaacctgtcactgtttgataaactgcctttgttctgcttctgtaagcttgcttgcccg
ccctacaggtttcacgccactaactggccaccccctttcggatgcatgtataaaagtcaagccctgtctt
tgttcggggctcagcctttggatgttaatccgctgggccggtggccacctaataaaatcctcctgtccca
cccattggtctctcctgtcccttgattcctgcaaca
>LTR5   LTR from human endogenous retrovirus 5' LTR, clone HERV-K18.
tgtggggaaaagcaacagaggtcagattgttactgtgtctgtatagaaagaagtagacataggagactcc
attttgttctgtactaagaaaaattattctgccttgagatgctgttaatctatgaccttacccccaaccc
cgtgctctctgaaacatgtgctgtgtcaaactcagggttaaatggattaagggcggtgcaagatgtgctt
tgttaaacagatgcttgaaggcagcatgctcattaagagtcatcaccactccctaatctcaagtacccag
ggacacaaaaactgcggaaggctgcaggggcctctgcctaggaaagccaggtattgtccaaggtttctcc
ccatgtgagagtctgaaatatggcctcgtgggaagggaaagacctgaccgtcccccagcccgacacccat
aaagggtctgtgctgaggaggattagtataagaggaaagcatgcctcttgcagttgagacaagaggaagg
catctgtttcccacccatccttgggcaatggaatgtctcggtataaaacccgattgtacgttccacctac
tgagatagggagaaaccaccttagggctggaggtgggacatgcaggcagcaatactgctttgtaaagcat
tgagatgtttatgtgtatgcatatctaaaagcacagcatttaatcctttaccttgtctatgatgcaaaga
cctttgttcacgtgtttgtctgctcaccctctccccactattgtcttgtgaccctgacacatctccctct
cagagaaacacccacgaatgatcaataaatactaaggggactcagaggctggtgggatcctccatatgct
gaacgttggttccccgggcccccttatttctttctctatactttgtctctgtgtctttttcttttccaag
tctctcattgcaccttacgagaaacacccacaggtgtggaggggcaacccaccccttca
>LTR11   LTR from human HTLV-I related endogenous retroviral sequence (HRES-1/1).
tgtgtttctgcaggatgtacagccctcccagcacggtgctcgcttccctaatgccattccacagtatttg
ttgcagagaaggaaggcagcatgccaggacagatggagacaggactaatttggcctgaggtatgtaattt
tgaacttgagcctctctctgggactgtaaaactccaaatcaaagctaatctgagaatacatacatctgaa
agatgattaggactgtaaacatctattaatattcaactctgatacaaagtacaagttgtttattcttacc
acgcaaggccaaaaaaggggagaaaaaaaaaaaagcacacagcatatgcactggaaagtttcgcttattc
aaaacagtatttgtcaagcacctccagtctggtgctgcaggggaaacaaagattaaacagccaggcggac
actgctctgcttccaaggtgcttacggtcttaagaaggagacaagacatgtttataaatagccaaaatgc
aacccagaaaaggctaaaaaacactgagagggagggagaaataaacgaagcaagaggtctccggaggaag
agatgaatgaattagcctattaataactccgtcactgtaatcccaatgtaaagcaagaattccaaaccag
gaaaggtcaaactgaagtatttgaggaacacaggcgtcgcctaagcccttcaca
>LTR12   LTR from human ERV9 endogenous retroviral sequence (HRES-1/1).
tgtgtctagctaattgggtggggacttggagaacttttctgtctagctaaaggattgtaaatgcaccaat
cagcactctgtgtctagctaaaggattgtaaacgcaccaatcagcactctgtaaaacggaccaatcagca
ctctgtaaaatggaccaatcagcactctgtaaaatggaccaatcagcaggatgtgggtggggccaaataa
gggaataaaagctggccacccgagccagcagcggcaacccgctcgggtccccttccacgctgtggaagct
ttgttcttttgctcttcacagtaaatcttgctgctgctcactctttgggtccgcactacctttatgagct
gtaacactcaccgcgaaggtctgcggcttcattcctgaagtcagcgagaccacgaacccaccggaaggaa
caaacaactccggacgcgccgcctttaagagctgtaacactcactgcgaaggtctgcggcttcactcctg
aagtcagcgagaccacgaacccaccggaaggaagaaactccagacacatctgaacatctgaaggaacaaa
ctccggacacaccatctttaagaactgtaacactcaccgcgagggtccgcggcttcattcttgaagtcag
cgagaccaagaacccaccggaaggaaccaattccggacaca
>LTR13   LTR from a human endogenous retrovirus.
tgtgggcggcaagccacccaggtgccgaggcaagagaccgagggcacgagctgttccagtataataaaat
atataaaataagaatagttatactagatatagatcttagatatgattatatatgaatatcattaatcatt
agtttgtagcaattactctttattccaatattataataatcctcgctctacaatcataacctaggaaaaa
ccaggccatacagagataggagctgaggggacatagtgagaagtgaccagaagacaagagtgcgagcctt
ctgttatgcccggacagggccaccagagggctccttggtctagcggtaacgccagcgtctgggaagacgc
ccgttgccaagcggaccgtggtctagcggtagcgtcagtgtcaaggaaaaacacccgctacttagcagac
cgggaaagggagtctccctttccccgggggagtttagagaagactctactcctccacctcttgtggaggg
cctgacatcagtcaggcccgcccgcagttatccggaggcctaaccgtctccctgtgatgctgtgcttcag
tggtcacgctcctagtccgccttcatgttccatcctgtacacctggctctgccttttagatagcagtagc
aaattagtgaaagtactaaaagtctctgataagcagaaataatggcgtaagctgtctctctctctctcct
ctctctctctgcctcggctgccaggcagggaagggccccctgtccagtggacacgtgacccacgtgacct
tacctatcattggagatggctcacactccttaccctgcccctttgtcttgtatccaataaatatcagcgc
agcctggcattcggggccactaccggtctccgcgtcttggtggtagtggtcccccgggcccagctgtctt
ttcttttatctctttgtcttgtgtctttatttctacactctctcgtctccgcacacggggagaaaaaccc
accgaccctgtggggctggaccctaca
>MER1A   Nonautonomous DNA transposon.
caggggtccccaacccccgggccacggaccggtaccggtccgtggcctgttaggaaccgggctgcacagc
aggaggtgagcggcgggcgagtgagcgaagcttcatctgtakttacagccgctccccatcactcgcatta
ccgcctgagctccacctcctgtcagatcagcggtggcactagattctcataggagcgcgaaccctattgt
gaactgcgcatgcgagggatctaggttgcgcgctccttatgagaatctaatgcctgatgatctgtcgctg
tctcccatcacccccagatgggaccgtctagttgcaggaaaacaagctcagggctcccactgattctaca
ttatggtgagttgtrtaattatttcattatatattacaatgtaataataatagaaataaagtgcacaata
aatgtaatgcacttgaatcatcccgaaaccatcccccccccctggtccgtggaaaaattgtcttccacga
aaccggtccctggtgccaaaaaggttggggaccactg
>MER1B   Nonautonomous DNA transposon.
caggggtccccaacccccgggccgcggaccggtaccggtccgtggcctgttaggaacygggctgcacagc
aggaggtgagcggcgggcgagtgagcattaccgcctgagctccgcctcctgtcagatcagcggcggcatt
agattctcataggagcgcgaaccctattgtgaactgcgcatgcgagggatctaggttgcgcactccttat
gagaatctaatgcctgatgatctgaggtggaacagtttcatcccgaaaccatccccgccccccggtccgt
ggaaaaattgtcttccacgaaaccggtccctggtgccaaaaaggttggggaccactg
>MER2   Nonautonomous DNA transposon.
cagtcgtccctcggtatccgtgggggattggttccaggaccccccgcggataccaaaatccacggatgct
caagtccctgatataaaatggcgtagtatttgcatataacctacgcacatcctcccgtatactttaaatc
atctctagattacttataatacctaatacaatgtaaatgctatgtaaatagttgttatactgtattgttt
agggaataatgacaaggaaaaaagtctgtacatgttcagtacagacgcaaccatccattttttttctgaa
tattttcgatccgcggttggttgaatccacggatgcggaacccacggatacggagggccgactg
>MER3   Nonautonomous DNA transposon.
cagcgctgtccaatagaactttctgtggtgatggaaatgttctatatctgcgctgtccaatacggtagcc
actagccacatgtggctaytgagcacttgaaatgtggytagtgcgactgaggaactgaatttttaatttt
atttaattttaattaatttaaatttaaatagccacatgtggctagtggctaccatattggacagcgcag
>MER4A   internal sequence belongs to the MER4I group; subfamily MER4A.
tgtgaaaggaaaataaatctcgggrccccmaaatcactaagccaaagggaaaagtcaagctgggaactgc
gtyaggcaaacctgcctcccattttattcctaaataagatagctacaaagataaaaggctacatacctct
ctcacaatttycyacaaggaaattccttgcggacctcaagatctttaccctaaaacagttctgytgamyt
tcaccttggcawtgyaaatggrtacaggacaaaggtacagaactgaaagtcatccctctgctcacctgag
acaaatgcatatctgattgcttcctctgccctattgtttatgtaaaaatgcagattcactgagccagact
maattgtgtattcagtgaaargctgatcarrgactcaaaagaatgmagccwtttgtctcttatctaccta
tgacctggaagcccctrcttcgagttgtcccgcctttccagaccgaaccaatgtacatcttacatatatt
gattgatgtctcatgtctccctaaaatgtataaaascaagctgtrccccgaccaccttgggcacatgtcg
tcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaaataaactttctaaattgaytg
agacctgtctcagatacttttgggttcaca
>MER4B   internal sequence belongs to the MER4I group; subfamily MER4B.
tgtaaaccaaaaataaaattctaagkcccccaaccgtctgaatggacycctcctctyggccaagggcayt
ccaaagytaacctgraaaactagttcaggccatgatgggaagtgggggtcggacacgcctcattataccy
tccyycttctggaattcaggcacaactgaccagcattaacatcaacacagacnttaagtctgataagaaa
cagtttacaayctrttctctctgaagcctgctanctgaargcttcatctgcacgataaaacttggtctcc
gcaaccccttatntcataacccggacattcctttccattgatctyaantcttcaaccarttgccaatcag
aaaatctttgaatctacctatgacctggaagcccccgcttcgagttgtcccgcctttccggaccgaacca
atgtacatcttacatgtatttgattgatgcctcatgtctccctaaaatgtataaaascaagctgtrcccc
gaccaccttgggcacatgtkgtcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaa
ataaactttctaaattgaytgagacctgtctcagatacttttgggttcaca
>MER4C   internal sequence belongs to the MER4I group; subfamily MER4C.
tgtgaaaggaaaataaaaacttgggaccccaattcactatgccaaaaggaaaaaattaagctgaaagctg
agtcatgcaagaaactgcctttccttttgttcctaagcagatagctacagataaaaggttaaatatctcc
acaggtagctactctatgttcaccttatcttatgtaaagtgccgatttactgagcacgagacgaatacat
aattgactattcccctacctgctccttttctcttgcaacatgtggattcagtaatgtgaccataccctcc
ctctttcccctccagcccgcttttcccctttaaatattgaagccctcaaaatcatctttggagaaaggca
cagaccacagatgtttctgtgatttcgtgtttctttctcccgggcatgtccttaaccttggcaaaataaa
cttctaaattgattgagacctgtctcagatactttttggtttaca
>MER5A   a consensus.
cagtggttctcaaagtgtggtccccggaccagcagcatcagcatcacctgggaacttgttagaaatgcag
attctcgggccccaccccagacctactgaatcagaaactctgggrgtggggcccagcaatctgtgtttta
acaagcyctccaggtgattctgatgcatgctcaagtttgagaaccactg
>MER5B   a consensus.
cagtggttctcaaccytggctgcayattagaatcacctggggagyttttaaaaatccngatgcccgggcc
acaccccagaccaattaaatcagaatctctggrggtgggacccaggcatcagtattttttaaarctcyyc
aggtgattccaatgtgcagccaaggttgagaaccactg
>MER6   Nonautonomous DNA transposon.
cagcaggtcctcgaataacgtcgtttcgttcaacgtcgtttcgttataacgttgatgagaaaaaaaatcg
attcccggccggggccactgtctgtgtggagtttgcacgttctccccatgtctgcgtgggttttctccgg
gtactccggtttcctcccacatcccaaagatgtgcacgttaggttaattggcgtgtctamatggtcccag
tctgagtgagtgtgggtgtgtgtgtgagtgcgccctgcgatgggatggcgtcctgtccagggttggttcc
cgccttgcgccctgagctgccgggataggctccggccacccgcgaccctgaactggaataagcgggttgg
aaaatgaatgaatgaatgaatacaaattattgtaaaataaaaatttataaagtatacgataatcatacaa
atgcacgacaataaatgatgtggtacgaaagtgctcagcgagcccgccatatttgtgattgtttgttttt
gaactgcgtggtggtaggaggtgctccttacaattttcgctttgcaaacatttattccttgatttaaccc
accaccactacgaccgccgtcactcactgattcaccaaaaattgggtaaataattatcttacttgttttt
attaatctttcttaaatgtatgtatagctcacatttatttcaatgtttaatattagaagtgttttggtct
ttatttagaagtttggtgatgtttttgtgaccagaaatatgccgtaggaacttaactcttgtttatatca
attagcctatggtaaaattggtttcgttatacgtcgtttcgcttaaagtcgcagtttccaagaacctatc
gacgacgttaagtgaggacttactg
>MER8   Nonautonomous DNA transposon.
cagttgtccctctgtatanncgggggattggttccaggacccytgtgtatacmaaaatccgcgcatactc
aagtcccgaagtcggccctgcggaacccacgnatatgaaaagtcggccctccatatatacgggtttcgca
tcccgcgaatactgtattttcaatccgcgtttgattgaaaaaaatccgcgtataagtggacccacgcagt
tcaaacccgtgttgttcaagggtcaactg
>MER9   internal sequence HERVK9I belongs to the HERVK-group.
tgttgggaacaggcccccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgc
agcactgtgacatgttcatgatggccntaacgcccacgctggaaggttgtgggtttactggaatgaggac
aaggaacacctggcccacccaggtcggaaaaccgcttaaaggcgttcttaaaccatgaacaatagcatga
gcaatctgtgccttaagggcatgttcctgctgcagataactagccagacccaccccttcatttcggccca
tcccttcttttcccataagggatacttttagttaatcgagtatctatagaaacaatgctaatgactggct
tgctgttaataaatacatgggtaatctctgtttggggctctcagctctgaaggctgtgaggccctgattt
cccactttacacctctatatttctgtgtgtgtgtctttaattcctctagtgccactgggttaggctgtcc
ccagtcgagctggtctcgca
>MER11A   LTR from HERVK-related endogenous retrovirus HERVK11.
tgttgcgggaagtcagggaccccgaatggagggaccggctggagccryggcagaggaacataaattgtga
agatttcattttaatatggacatttatcagttcccaattaatacttttataatttcttatgcctgtcttt
actgcaatctctgaacataaattgtgaagatttcattttaatatggacatttatcagttcccaaataata
cttttataatttcttatgcctgtctttactttaatctcttaatcctgttatcttcgtaagctgaggatgt
acgtcacctcaggaccactgtgataattgtgttaactgtacaaattgattgtaaaacatgtgtgtttgaa
caatatgaaatcagtgcaccttgaaaaagaacagaataacagcgattttagggaacaagggaagacaacc
ataaggtctgactgcctgcagggtcgggcaaaatagagccatatttttcttcttgcagagagcctataaa
tggacgtgcaagtaggraagatatcgctaaattcttttcctagcaaggaatattaataattaataccctg
ggaaaggaatgcattcctggggggaggtctataaacggccgctctgggaatgtctgtcttatgcagttga
gataaggactgaaatacgccctggtctcctgcagtaccctcaggcttactagggtggggaaaaaaccccg
ccctggtaaatttgtggtcagactggttctctgctctcgaaccctgttttctgttgtttaagatgtttat
caagacaataygtgcaccgctgaacatagacccttatcagtagttctgattttgcccttgtcctgtttcc
tcagaagcatgtgatctttgttctcctttttgccctttgaagcatgtgatcttgtgacctactccctgtt
cttacaccccctccccttttgaaatccttaataaaaacttgctggttttgaggctcaggtgggcatcacg
gtcctaccgatatgtgatgtcaccccyggaggcccagctgtaaaattcctctctttgtactctttctctt
tatttctcagccrgccgacacttatggaaaatagaaagaacctacgttgaaatattgggggcaggttccc
ccgata
>MER11B   LTR from HERVK-related endogenous retrovirus HERVK11.
tgttgcgggaagtcagggaccccaaacggagggaccggctgaagccatggcagaagaacatggattgtga
agatttcatggacatttattagttccccaaattaatacttttataatttcttatgcctgtctttactgca
atctctaaacataaattgtgaagatttcatggacacttatcacttccccaatcaatacccttgtgatttc
ctatgcctgtctttactttaatctcttaatcctgtcatcttcrtaagcttcatgagctgaggatgtatgt
cgcctcaggaccctgtgatrattgcgttaactgcacaaattgtttgtacagcatgtgtgtttgaacaata
tgaaatctgggcaccttgaaaaaagaacaggataacagcaattgttcagggaacaagagagataacctta
aactctgactgccggtgagccrggcrgaacagagccatatttctcttctttcaaaagcaaatgggagaaa
tatcgctgaattctttttctcagcaaggaacatccctgagaaagagaatgcgyacctaggggtaggyctc
tgaaatggcccccctgggagtggcctgtcttttatggtngaaactgcagggatgaaataarccccagtct
cccatagcgctcccaggcttattaggawgaggaaattcccgcctaataaattttggtcagaccggttgtc
tgctctcaaaaccctgtctcctgataagatgttatcaatgacaatgcgtgcccgaaacttcattagcaat
tttaatttcgccccggtcctgtggtcctgtgatctcgccctgcctccayttgccttgtgatattctatta
ccttgtgaagtacgtgatctctgtgacccacaccctattcgtacactccctccccttttgaaaatcccta
ataaaaacttgctggtttttgcggcttgtggggcatcacggaacctaccgacatgtgatgtctcccccgg
atrcccagctttaaaatttctctcttttgtactctgtccctttatttctcaagccagccgacrcttaggg
aaaatagaaaagaacctacgtgattatcggggcaggttccccgata
>MER20   Nonautonomous DNA transposon.
cagtggttctcaaccgggggtgattttgccccccaggggacatttggcaatgtctggagacatttttggt
tgtcacaactggggggggggratgctactggcatctagtgggtagaggccagggatgctgctaaacatcc
tacaatgcacaggacagcccccacaacaaagaattatccggcccaaaatgtcgatagtgccaaggttgag
aaaccctg
>MER21   a consensus.
gcgttgggaggtgggatatgattgtatatgtgtttttgtccatggttcttgtccataactcacatgacca
tggttacagtctttcgctataatgtagaggtgctttaggcctcaggaaacagaatatytctctgrccttc
tcytgycctcytttcakccgcccaaggcaggactctataatctgattgtgggtcgtaagaccctcattcc
agaggrggtcctgccccataccctggaggaaggaatgctgcacaaagagaccaagaagaatctggacagr
ccttgctgggattagatcagaccctttttgyccaatcacattwtnncartcgtccatgcttcagtcatgg
acanccaatgagrtctccataaaaggcccaaaggacagggttcagrgagcttctggagagctgaacacgt
ggaggctracagaaggtgaagaatctggagggtgtaaccccaayyctatcargacggaagctcctgcgct
gggmycttccagaccgccccgtatgtatctcttcatctgtatcctttgaaatatcatctattaataaacc
agtaaacwtaataagtgtttcyytgagttttgtgarccactctagcaaattartcgaacctaaagaggtg
tcgtgggaaccccaayttgaagccagttggtcagaagttccagagrcccggrcttgcaactgtrtctgaa
ggtggggncagtcttggggactgagacctcaacctgtgggatctgacgctatctccaggtagacagtgtc
ggaactgarttggaggacgcccagctggtgtctgctgcttggtgtgtggggaaaatcctccacacatttg
gtcacagaagtcttctgtgttgacgactgttgtcgtggtatgasagcagaggraaaacatggtttgagag
aggttttyctgmaayagragggc
>MER21B   Long terminal repeat of retrovirus-like element - a consensus.
tgtgatattgtgaaatatatatttggtcttcgnccccgtttcctggcacanagctcctaaaacccttgga
atctccngagtgataggagtntctttgtgtgctaatgagntgactgntggctggcggcccctaggtagct
tcaggatgggggctggtcaccagaaagaccaaggcangattagagggttgggactttcagccccaccccc
caacctccagggaggggagaggggctgaaggttgagttgatcaccaatggccaatgatntaatcaatcat
gcctacgtaatgaagcctccataaaaacccaaaaggacngggttcggagagcttctggatagctgaacac
gtggaggttcctggagggtggcgngcccggggagggcacggaagctctgcgccccttctcccatacctcg
ccctatgcatctcttcatctggctgttcatctgtatcctttgtaatatcctttataataaacnggtaaac
gtaagtaaagtgtttccctgagttctgtgagccgctctagcaaattaatcgaacccaaggagggggttgt
gggaaccccaatttatagccggtcggtcagaagcacaggtnacaacctggngcttgcgactggcatctga
agtggggggcagtcttgtgggactgagccctcaacctgtgggatctgacgctatctccaggtagatagtg
tcagaattgaattgaattagaggacacccagctggtgtccgctgnagaattgnttgcttgcttgtnngtg
gggaaaaacccccacacatttggtcacagaagtnttctgtgttgattgtnntgagtgagagaatagaaaa
aacactttgtttgtgtttttcca
>MER22   Human SSTI moderately repetitive DNA sequence family.
gagctctgggcttccatacctgtgtgggacagggaagctctctcggtctccatggcccaagtgatggctg
cacgctcggtccaggaagaggcggaggaagcccaccgctcctgacattggccttctaggaaaggcggtgt
tgcatcccacctgcacttcctctctgattcttgagggccaaccgcttcctccgctcctggggaaagtgcc
ttctagcaccgaatcttttggctgccacggatgtcagggagccaacgggactgggttttggctgggtgca
ggggaggttgcgtcaggggtactagccggcggcgggctgggggtggggtgtactttgtccaaactcccgg
ctcctctggcgggcctccctgaacgtggcgtggactcgcgcacaggccctgtctcgcaggttttcaggtg
cgcttggcttttcctccgctttgtggggcaggtctccagtgcccccggcgcacgcctggacatcactgtc
cgtctcgtcgtcgcccctacggcctcaaagacacacgctgcctgcatgtgctcttgggggacgacagtgc
acatgtggacacactggctccagctcggactcgcctctgtctctctttgcccgtgtcgccggaagccgcc
tcgggttgccggagccctcgggccttggagatgaaggcaggcccctgctcctgccaggaaggagggaggc
agtgggctcatgggtcggtgcctttgcagccgacagcacgtgcggccctggggatcttcctgtgccccgg
cgagaccctttccgcctcactgcattggaaccccattcccgatcacccgctgggatccatcatcggactc
caagaggagtccgcgcagccagccggcaccccgaagctcctccttcagcgggaaccgaagcagaagagcg
atcaaggaggtcctcaccacaggactcctatgggtccgaccctgggtctcccgcaggcccctctggcagt
cctcttcccacccgccgcctcggcttcgccgccgccgccgcaacctccagcaccgccccccaggccccgc
agccgccgtcgccgccattttttaaagggtcgcagcctgactctgcggagtaagggggggtggagcgggg
gagtcgctcgccagcatgcgcgagcccgagccgccgcttgggtcacagtgaaagccaccgttgcccgggg
atgggtccctgacacttggggaagtaggagccctgtgtgatcgtgcgtctgagtctgggctgagaccagt
cctggccagggcagttaccaggacggtctcggaggccgggattcgcggagggtccagcagcaggaagaaa
ccccaggaggaagaaacctcagacagatcgccggcgaggcagcgcgggatcccagcctcaggcgtgcgcg
gacggtgtgcgggtgagtctccccaaaagtggagcccttgtgatgacgagcacaggtccgcctgcgtgcc
cgtgggcggctctctcaccggtggctctcagtcgcggagagcagaacccgcagcttcaggggctgctgcg
ggagggtgttccctgctgtacgt
>MER28   Nonautonomous DNA transposon.
cagttgacccttgaacaacatgggtttgaactgcgtggrtccacttatacgcggattttcttccatctct
gccaccctgagacagcaagaccaacccctcctcctcctcagcctactcaacntgaagacgangaggatga
agacctttatgatgatccacttccacttaatgaatagtaaatatattttctcttccttatgattttctta
ataacattttcttttctctagcttactttattgtaagaatacggtatataatacatataacatacaaaat
atgtgttaatcgactgtttatgttatcggtaaggcttccagtcaacagtaggctattagtagttaagttt
tkggggagtcaaaagttatacgtggatttttnactgcgcggggggtcagcgcccctaacccccgcgttgt
tcaagggtcaactg
>MER30   Nonautonomous DNA transposon.
caggggtgtccaatcttttggcttccctgggccacactggaagaagaagaattgtcttgggccacacata
aaatacactaacactaacgatagctgatgagctwaaaaaaaaaaaamaatcccamaaaaatctcataatg
ttttaagaaagtttacgaatttgtgttgggccgcattcaaagccatcctgggccgcgtgcggcccgcggg
ccgcgggttggacaagcttg
>MER33   Nonautonomous DNA transposon.
ctgcgctgtccaatacggtagccactagccacatgtggctattgagcacttgaaatgtggctagtccaaa
ttgagatrtgctgtaagtrtaaaatatacaccagatttcaaagacttagtacgaaaaaaagaatgtaaaa
tatctcattaataatttttatattgattacatgttraaatgataatattttggatatattrggttaaata
aaatatattattaaaattaatttcacctgtttctttttacttttattaatgtggctactagaaaatttaa
aattacatatgtggctcgcattrtatttctattggacaacgctg
>MER35   a consensus.
gatgtggcgtttgagtggacacgggggaagaaacaagtaatatgaataacatggtgagacagaaagagtt
gtggacagagctgtgggaaatatgagagataaggagagagatactgaaaagagcgttaagagagatgaag
atagggtgtctggcccatgaaggccctcgtgaagagcaatgctgaatagatgaatgaacctcaatgccca
gcagtggtgggatgaaaaggggatcctgtgcagaaaccacactacccatcagagaagcaactctgctcgt
ttccccttga
>MER39   Long terminal repeat of retrovirus-like element - a consensus.
tgttggggctcagaaaacgataccccaaagtatggcactttggcatgctgagtactttgaactgaaggag
attggaaggcctcagaagcagcctcagaagcaaagtctctctctgaccttctcccgccctcctgtctctc
gcccccattctctcctccccgaagcaagtcatagaaaccagaattcctcttccccaaggcaggtcataga
aactagaactcctctcccccaaagcaagccataaaacctagaaatattactctaaccttcccccgccttt
ctgtntaggagctggccataaagaaattctctgacctaccttgtctgatagtaggtcataagaccctcat
tccagaaggggtcctgccccatacccgggaggaaggaatgctacacagagaggccaagaagaatctgaac
agacaggccttgctgggtttccccactcagtctattaccattagatcataccccttttgtccaatcacat
ttctacatggctgtccattcttcatcaaacctaagcataaaaatagagttttccctgggtctttgggtct
tcatttctgaaggctcccatgtcacgtaaaactttgattaaataaatttgttatgcttttctcttgttaa
cctgtcttttgttataggagtgtcggccgtgacccttatgatgggtaggaaaggtatcacacctttctgc
ccctaca
>MER44A   Nonautonomous DNA transposon.
cagtagtccccccttatccgcggtttcactttccgcggtttcagttacccgcggtcaaccgcggtccgaa
aataggtgagtacagtacaataagatattttgagagagagagaccacattcacataacttttattacagt
atattgttataattgttctattttattattagttattgttgttaatctcttactgtgcctaatttataaa
ttaaactttatcataggtatgtatgtataggaaaaaacatagtatatatagggttcggtactatccgcgg
tttcaggcatccactgggggtcttggaacgtatcccccgcggataaggggggactactg
>MER44C   Nonautonomous DNA transposon.
cagtagtccccccttatccgcggtttcgctttccgcggtttcagttacccgcggtcaaccgcggtccgaa
aatattaaatggaaaattccagaaataaacaattcataagttttaaattgcgcgccgttctgagtagcgt
gatgaaatctcgcgccgtcccgctccgtcccgcccgggacgtgaatcatccctttgtccagcgtatccac
gctgtatacgctacccgcccgttagtcacttagtagccgtctcggttatcagatcgactgtcgcggtatc
gcagtgcttgtgttcaagtaacccttattttacttaataatggccccaaagcgcaagagtagtgatgctg
gcaattcggatatgccaaagagaagccgtaaagtgcttcctttaagtgaaaaggtgaaagttctcgactt
aataaggaaagaaaaaaatcgtatgctgaggttgctaagatctacggtaagaacgaatcttctatccgtg
aaattgtgaagaaggaaaaagaaattcgtgctagttttgctgtcgcacctcaaactgcaaaagttacggc
cacagtgcgtgataagtgcttagttaagatggaaaaggcattaaatttgtgggtggaagacatgaacaga
aacgtgttccgattgatggcaatcgggttcggtactatccgcggtttcaggcatccactgggggtcttgg
aacgtatcccccgcggataaggggggactactg
>MER45   Nonautonomous hAT-like DNA transposon.
cagggccggcttcatgggcgtgcgacctgtgcagtcgcacagggccccgcgctcagaagggccccgcgct
tggtttaatgctctgctgtcgccgtcttgaaattcttaataatttttgaacaaggggccccgcattttca
ttttgcactgggccccgcaaattatgtagccggtcctg
>MER48   Long terminal repeat of HERVH-related endogenous retrovirus HERVH48I.
tgwaagattctccccrgggcctgaaagcttraggggatgartaacccctcccttcctcaggcccagtccc
aaggcgcaaggtcacttgtgccagcagtgtgcgccagcaagatagcagaagcaggaagagagccggccgg
aagacacgtacccccgaagatcgagaaagaggccatccgggtacaacgtagcagttacgtcagactggga
cacttcctgtttacaggagactataaaaccyytgccccgtcctcacttggggctgacgccattttaggcc
tcagcccgcctgcactcaggcagcacccaggcgctcattaaaacagcgtgttgctccacacctcctcgtg
ttgttgtggacgcgctctcggggttsgaaccgayacaagarccttaca
>MER53   a consensus.
gggttgccagatttagcaaataaaatacaggatgcccagttaaatttgaatttcagataaacaacaaata
attttttagtataagtatgtcccatgcaatatttgggacatacttataactaaaaaattattcattgttt
atctgaaattcaaatttaactgggcatcctgtattttatctggcaaccc
>LOR1   Human low copy repetitive sequence - a consensus.
tgaaaccgrcccaattgtcccatagaactgatgtttatrgtttttttgaataaacatagaaattgaccct
cctggtcttaaarcttgaaacttacatttgtyttatctgagttccttcctcaggaaaccaacyntcaggc
ctcycaaawagtatcaargaactgaaactcaccagatcacyrcatccagacaatgagayrccagacccct
catycatcatgattgcctaactgaccacctgctkcctgttgaccaactcctcttccttacccctccctaa
ttcctgttttcyyacacatagttacatttcttccctgctatataaaccccyaattttagtyngtcaggga
gatggatttgagactgatctcccatctcctcggctgcagcaccyrawtaaagccttcttccttggcaata
mtyrttgtctcagtgattggctttctgtgcagtgagcagcaggacctagacyraacccctggtrtttcag
taaca
>SVA   Composite retroposon.
ctccctctccctcaccctctccccatggtctccctctccctctctttccacggtctccctctgatgccga
gccgaagctggacggtactgctgccatctcggctcactgcaacctccctgcctgattctcctgcctcagc
ttgccgagtgcctgcgattgcaggcgcgcgccgccacgcctgactggttttcgtattttgttagtggaga
cggggtttcgctgtgttggccgggctggtctccagctcctaaccgcgagtgatccaccagcctcggcctc
ccgaggtgctgggattgcagacggagtctcgttcactcagtgctcaatgatgcccaggctggagtgcagt
ggcgtgatctcggctcgctacaacctccacctcccagcagcctgccttggcctcccaaagtgccgagatt
gcagcctctgcccggccgccaccccgtctgggaagtgaggagtgtctccgcctggccacccatcgtctgg
gatgtgaggagcgtctctgccctgccgcccatcgtctgagatgtggggagcacctctgcccggccgcccc
gtccgggatgtgaggagcgtcgctgcccggccgccccgtctgagaagtgaggagaccctctgcctggcaa
ccgctccatctgagaagtgaggagcccctccgcccggcagccgccctgtctgagaagtgaggagcccctc
cgcccagcagccacctggtccgggagggaggtgggggggtcagccccccgcccggccagccgccccgtcc
gggagggaggtgggggggtcagcccccagcccggccagccgccccgtccgggaagtgaggggcgcctctg
cccggccgcccctactgggaagtgaggagccactttgcccggccagccactctgtccgggagggaggtgg
gggggtcagccccccgcccggccagccgccccgtccgggagggaggtggggggatcagccccccgcccag
ccagccgccccgtccgggagggaggtgggggggtcagccccccgcccggccagccgccctgtccgggagg
tgaggggcgcctctgcccggccgcgcctactggaaagtgaggagcccctctgcccggccaccaccccgtc
tgggaggtgtgcccaacagctcattgagaaggggccatgatgacaatggcggttttgtggaatagaaagg
ggggaaaggtggggaaaagattgagaaatcggatggttgccgtgtctgtgtagaaagaggtagacctggg
agacttttcattttgttctgtactaagaaaaattcttctgccttgggatcctgttgatcggtgaccttac
ccccaaccctgtgctctctgaaacatgtgctgtatccactcagggttgaatggattaagagcggtgcaag
atgtgctttgttaaacagatgcttgaaggcagcatgctccttaagagtcatcaccactccctaatctcaa
gtacccagggacacaaacactgcggaaggccgcagggtcctctgcctaggaaaaccagagacctttgttc
acttgtttatctgctgaccttccctccactattgtcctgtgaccctgccaaatccccctctgtgagaaac
acccaagaatgatcaataaaaaaaaaaaaa
>ALR   Human alpha repetitive DNA - a consensus.
aattctcagtaacttccttgtgttgtgtgtattcaactcacagagttgaacgatcctttacacagagcag
acttgaaacactctttttgtggaatttgcaagtggagatttcagccgctttgaggtcaatggtagaatag
gaaatatcttcctatagaaactagacagaat
>MSR1   Human 37 BP minisatellite repeats, specific to chromosome 19.
agtcaagacccccagcccctcctccctcagacccaggagtcaagaacccccagcccctcctccctcagac
ccaggagtcaagaacccccagcccctcctccctcagacccaggagtcaagaccccccagcccctcctccc
tcagactcatgagtccagacccccagcccctcctccctcagacccaggagtccagacccccagcccctcc
tccctcagacccaggagtccagacccccagcccctcctccctcagacccaggagtccaggccccacccct
c
>TAR1   Telomere associated repeat sequence, complete sequence.
gatcaacagtgaggaggtcccacaaggctaagtggggcaagtcggggacctaaggcagtagcaggaaaac
caaagaaaacaggcggagacttgagacagaggcaggaatgtgaagaagtccaaaataaaaatccctgcac
aggactcttaggctgttatcatgcactatcagcctactcctccctatttttgtacaataagctctttaca
ctgtatttcttttcaatgaagttatcttccatctttgtactgcctcttggtgaaaagctgtcttccaagt
taataactgggacatcagctctctgcagtaatagctccttttcagttttaatttgcagaactgatgggga
ttaataactggcgctctgactttaagtggtgcaggaggcggccagtaggggacgccagccgttacgccgg
gagcaagagggccctgcgtagtccccatctgcctgcatgtggcgtgcagccacgacaatggcagcaagag
ggcccggcagtgtgcccagctgccagcaggcgggtgtgctgccactataatgtgaggaagagggccctgc
aatgtccctagctgccagcaggcggcgtgccaccactatactgcgagcaagagagccctgccgtgccccg
gcgccagcagggggcgctggacagcactgtaagcaagagggccctgcagttgtcctagtcgccagtaggg
gacgcaatggcagagcaccgtgggcaagctggtcctgtagtgcccggctgcaagcagggggcgcccgaaa
cgggcttttcagattactcaggttccactcgtctctgcgccgccggggacgtgtgtctctgcgcgtgcac
cgcgccacccccgcgctccccgcccggcggcgcgcgactgtgcgactgcaacactccccgccaccctcag
cccagcgacgtgcgtctctgcgcctgcgccgcgcctcactcccgcccgctcagcgacccctcccttccgg
ggaggcgccggcgtgcgtctacgccctgcgccgcgtctccccaacagcggcgcgcctctctgcgcctgcg
ccggcgcgccgcgcctctctgcgcctgcgccggcgcgccgcgcctctctgcgcctgcgccggcgccccgc
gcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgc
ctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgc
cccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctc
tgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgcc
ggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgc
ctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcct
gcgccggcgcgccgcctttgcgagggcggagttgcgttctctttagcacacacccggagagcatcgcgag
ggcggagctgcgttctcctctgcacagacttcgggggtattgcgaaggcggagcagagttcttctcaggt
cagacccgggcgggcgggctgagggcactgcgagggtggagctgcgttctgttcagcacagacgtggggg
gcaccgtaaaggcggagcagcattcttctcagcacagacgttgggggtactgcctgcctttgggataact
cggggccgcatcgagggtgaataaaatctttcccgtttgctgccctgaataatcaaggtcagagaccagt
tagaacggtttagtgtggaaagcgggaaacgaaaagcctctctgaatcctgcgcaccgagattctcccaa
ggcaaggcgaggggctgtattgcagggttcaagtgcagcgtcagaactcaaatgcagcattcctaatgca
cacatgacaccctaaatataacaggcatattactcatggagggttagggttcaggttcgggttcgggttc
gggttcgggtt
>CER   Human D22Z3 repetitive DNA (centromeric DNA) - a consensus.
cagaacactgctgctgggttctgagtgtttgtccctcacataggattccagaacactgctgctgggttct
gaatgtttgtccctcacataggattccagaacactgctgctgggttctgagtgtttgtccctcacatagg
attccagaacactgctgctgggttctgagtgtttgtccctcacataggattccagaacactgctacgagg
ttctgaatgtttgtccctcacataggattccagaacactgctgctgggttctgagtgtttgtccctcaca
taggattccagaacactgctgctgggttctgagtgtttgtccctcacataggattccagaacactgctgc
tgggttctgagtgtttgtccctcacataggattc
>BSR   Human beta satellite DNA - a consensus.
gatcagtgcagagatatgtcacaatgcccctgtaggcagagcctagacaagagttacatcacctgggt
>HSATII   Human satellite II DNA.
antccattcgggtccattcgatgatgatcacactggatttcattccataattctattcg
>HSATI   Human satellite I DNA HinfI fragment.
gantcngctcnngacacaactctctgagccttcggtgacctttcngtctngtgtaanngcactcntgtcy
ycctggcagcagttggacctcgcgatgtggattgtgccctcacccagcnntntttatgccctntcnccat
ggtgacnggattaggggtctcctgctcttcnntcctaaggaccactgtctgtgctgtgtctttcaaaggt
cagaagagattgnacctttgtgtttttattttccctgtgtttgctttttctcnntggggaacctgtgttg
ctgctttgaaggtatattcatactggccnntcanntgnncaacatcnncaaantnactagttanggcttt
caaaatatgntatttcaaaaaattanccgtctgtattttccatatgcagttataagtaggtttcatcggt
tatgttttattcctcagtttatacatttgattattgtaccaagcagagtacctttgaaattttttttcat
ttaaaaaatatggatctttaaaaaaaaattatatatgatatatattacatgttatgtgctatgccttatn
tgtaacatataacctcatatattttntatgtcatagtatataatatttatcctgtgtcatcttatatata
c
>R66   A 66bp tandem repeat - a consensus.
acagagtgctgattggtgcrtttacaaacctttagctagacacagagcgctgattggtgcgttttt
>SAR   Human satellite I DNA.
acataaaatatcaaagtacatcaaatatatattttattctgt
>SN5   Human centromeric SN5 satellite DNA sequence.
cttcccttcagggacctcaaagtgaccagcttccccttgaagaatgactctccaaggcccaggagcccag
cttctgggcctccaagccaggccatctggcgagggagtcggtggacgtgccctggcttcttccatgttga
gttggtactacccaccaaggggggtagagaggcgagcagatgttgtctctggcctgtgtcttgttatcat
ggtgctgactaggcctggtacagggccctgatggggttgtcctgggtggtcacgggggtgatgagaagaa
gatgcagaatggattgctgtgaggatgaatgagacgactgtcagtacagacaggcacacggtgaagtgtt
cagggattcccctcagtagctgcccagacccaaaacctgactcctgagtcacgttactgtcccactatac
gttaagaggagggaaagctgggtcgcgcaggtccc
>HIR   Human HINF family repeat DNA.
gattcccaggtgcacagagatcctaatccgcatccatcgaaatctcacaaagtgtccataaatcactcag
ggagggcccccatggatacagggccgtagtaggatgctcctatagtgggcattaatatgagaatgaccga
aaagtgcatttaggaccatattataattttcgggttcccaggtgcacgtttccaataaccaggtgcacgg
atgtatagggtcccccccatggatagaggtccgtgttagggtgctccatatcgggcatgaatatcaggaa
caccggcatgtgcacttaggaccatgttttaatttttca
>(GGAAT)   Satellites 2 and 3.
ggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaat
ggaat
>IVR   Repetitive sequence from human involucrin gene - a consensus.
caggaggggcagctgaagcacctggagcag
>KER   Human K element interspersed repeat DNA.
agctcatctgtccactgaagatgcttggacagagttaggaatgcttcctgggagaggtaacatttgagac
tttcctggaagaatggtcagagtaaaccaagtaagtaggaatggaaagaggatgggaggccccagcttcc
cagaggcataaggtgaggangnccctatgcattcagatgtggcccaccctggggtctggtggactaaagn
cttggacaccccagatcagccttagtgggatgaggcaggaaagacagctgagggtcagaacccaggcagg
tccaatgccagggtgggcatttcgagttggtgagacatttcaccctggtgccaagct
>MADE1   Human mariner derived element 1 - a consensus.
ttaggttggtgcaaaagtaattgcggtttttgccattactttyaatggcaaaaaccgcaattacttttgc
accaacctaa
>TIGGER1   Autonomous DNA transposon.
caggcatacctcgttttattgcgcttcgctttattgcgcttcgcagatactgcgttttttacaaattgaa
ggtttgtggcaaccctgcgttgagcaagtctgtcggcgccatttttccaacagcatgtgctcacttcgtg
tctctgtgtcacattttggtaattctcgcaatatttcaaactttttcattattattatatctgttatggt
gatctgtgatcagtgatctttgatgttactattgtaattgttttggggtgccacgaaccgcacccatata
agacggcgaacttaatcgataaatgttgtgtgtgttctgactgctccaccgaccggccgttcccccgtct
ctctccctctcytcgggcctccctattccctgagacacaacaatattgaaattaggccaattaataaccc
tacaatggcctctaagtgttcaagtgaaaggaagagtmrcacatctctcactttaaatcaaaagctagaa
atgattaagcttagtgaggaaggcatgtcaaaagccgagataggccaaaagctaggcctcttgcgccaaa
cagttagccaagttgtgaatgcaaaggaaaagttcttgaaggaaattaaaagtgctactccagtgaacac
acgaatgataagaaagyaaaacagccttattgctgatatggagaaagttttagtggtctggatagaagat
caaaccagccacaayattcccttaagccaaagcctaatccagagcaaggccctaactctcttcaattcta
tgaaggctgagagaggtgaggaagctgcagaagaaaagtttgaagctagcagaggttggttcatgaggtt
taaggaaagaagccatctccataacataaaagtgcaaggtgaagcagcaagtgctgatgtagaagctgca
gcaagttatccagaagatctagctaagatcaytgatgaaggtggctacactaaacaacagattttcartg
tagatgaaacagccttctattggaagaagatgccatctaggactttcatagctagagaggagaagtcaat
gcctggcttcaaagcttcaaaggacaggctgactctcttgttaggggctaatgcagctggtgactttaag
ttgaagccaatgctcatttaccattctgaaaatcctagagcccttaagaattatgctaaatctactctgc
ctgtgctctataaatggaacaacaaagcctggatgacagcacatctgtttacagcatggtttactgaata
ttttaagcccactgttgagacctactgctcagaaaaaaagattcctttcaaaatattactgctcattgac
aacgcacctggtcacccaagagctctgatggagatgtacaaggagattaatgttgttttcatgcctgcta
acacaacatccattctgcagcccatggatcaaggagtaatttcgactttcaagtcttattatttaagaaa
tacattttataaggctatagctgccatagatagtgattcctctgatggatctgggcaaagtaaattgaaa
accttctggaaaggattcaccattctagatgccattaagaacattcgtgattcatgggaggaggtcaaaa
tatcaacattaacaggagtttggaagaagttgattccaaccctcatggatgactttgaggggttyaagac
ttcagtggaggaagtaactgcagatgtggtggaaatagcaagagaactagaattagaagtggagcctgaa
gatgtgactgaattgctgcaatctcatgataaaacttgaacggatgaggagttgcttcttatggatgagc
aaagaaagtggtttcttgagatggaatctactcctggtgaagatgctgtgaacattgttgaaatgacaac
aaaggatttagaatattacataaacttagttgataaagcagcggcagggtttgagaggattgactccaat
tttgaaagaagttctactgtgggtaaaatgctgtcaaacagcatcacatgctacagagaaatctttcatg
aaaggaagagtcaattgatgcggcaaacttcattgttgtcttattttaagaaattgccacagccacccca
accttcagcaaccaccaccctgatcagtcagcagccatcaacatcaaggcaagaccctccaccagcaaaa
agattacgactcgctgaaggctcagatgatcgttagcattttttagcaataaagtatttttaaattaagg
tatgtacattgttttttagacataatgctattgcacacttaatagactacagtatagcgtaaacataact
tttatatgcactgggaaaccaaaaaattcgtgtgactcgctttattgcgatattcgctttattgcggtgg
tctggaaccgaacccgcaatatctccgaggtatgcctg
>TIGGER2   Autonomous DNA transposon.
cagttgacccttgaacaacacgggtttgaactgcgcgggtccacttatacgcggatttttttcaataaat
atattggaaaattttttggagatttgcgacaatttgaaaaaactcgcagacgaaccgcgtagcctagaaa
tatcgaaaaaattaagaaaaagttaggtatgtcatgaatgcataaaatatatgtagatactagtctattt
tatcatttactaccataaaatatacacaaatctattataaaaagttaaaatttatcaaaacttacgcaca
cacttacagaccgtacatggcgccattcgcagtcgagagaaatgtaaacaaacgtaaagatgcagtatta
aatcataactgcataaaattaactgtagtacatactgtactactgtaataatttcgtagccacctcctgt
tgctattgcggtgagctcaagtgttgcgagtatccgcttaaaacgccatgtgacgctaatcatctccgcg
tgagcagttcgtctctccagtaaattgcgtatcgcagtaaaaagtgatctctcgcggttctcgcgtattt
ttcatcgtgtttagtgcaataccgtaaaccttgaataacaccatgggacccatacgaagtgccactagtg
atgctggaagtgctcccaagaagcagagaaaagtcatgacattacaagaaaaagttgaattgcttgatat
gtaccgtagattgaggtctgcagctgcggttgcccgccatttcaagataaatgaatccagcataaggacc
attgtaaaaaaagaaaaggaaattcgtgaagccgtcgctgcagctatgccagcaggcgcgaaaaccttgc
actttttgcgaaatacctttttatctcgtattgaaaatgcagcttttatgtgggtgcaggattgctataa
gaaaggcatacctatagactctaatatgattcgagaaaaagcgaagtcattatatgacaacttaaagcaa
aaggaaggtgaaggatctaaagctggagaatttaatgccagcaaaggatggtttgataattttagaaaga
ggtttggcttnaaaaatgtcaagataacaggagaagcagcttctgccgaccaagaggcagcagacgagtt
cccagatgccattaagaaaatcattgaggagaaaggatatctgcctgaacaggtttttaatgcagacgaa
agtgccctattctggaggaaaaaaatgccacaaaggacatttattagtaaggaagagaagcaagcaccag
gatttaaggcaggaagggataggctaactctactgttttgtgcaaatgcagtcgggtttatgatcaggac
tgcccttatctataaagctgctaacccccgagccttgaagggaaaagataaacaccagctgccagtcttt
tggttgtacaacaagaaggcctggacaacgagaaccctttttctggattggttccatcgatgctttgtcc
ctgaagtcaggaagtaccttgccagtaagggactgccttttaaagttcttttgatattggacaatgcccc
tggccacccagaaccccatgagttcaacaccgaaggcgtcgaagtggtctacttgcccccaaacacaacg
tctctaattcagcctctagatcagggggtcataaggacctttaaggctcattacacacggtactctatgg
aaaggattgtcaatgctatggaagagaaccccaatagagagaacatcatgaaagtctggaaggattacac
cattgaagatgccatcgttgttacagaaaaagccgtgaaagccatcaagcccgaaacaataaattcctgc
tggagaaaactgtgtccagatgttgtgcatgacttcacaggatttacgacagagccaatcaaggaaatca
tgaaagagattgtggatatggcaaaaaaggtggggggtgaagggtttcaagatatggatcttggagaaat
tcaagagctaatagacaccacaccagaggaattaacagaagacgacttgatggagatgagtgcttccgaa
ccagtgccagacgatgaggaagaagacgtagaagaagcagtgccagaaaacaaattgacattagacaatc
tggcagaagggttccgattattcaagactgcttttgacttcttttacgacatggacccttctatgatacg
ggcactgaaactaaagcaaacggtggaagaaggattggtaccatatagaaacatttttagagaaatgaaa
aagcaaaaaagtcagacagaaattacgatgtatttccataaagttacaccgagtgtgcctgcctctcctg
cctccccttccacctcctccacctcttccgcctctgccaccctgagacagcaagaccaacccctcctctt
cctcctcctcctcagcctactcaacgtgaagacgatgaggatgaagacctttatgatgatccacttccac
ttaatgaatagtaaatatattttctcttccttatgattttcttaataacattttcttttctctagcttac
tttattgtaagaatacagtatataatacatataacatacaaaatatgtgttaatcgactgtttatgttat
cggtaaggcttccggtcaacagtaggctattagtagttaagttttkggggagtcaaaagttatacgcgga
tttttgactgcgcggggggtcggcgcccctaacccccgcgttgttcaagggtcaactg
>GSAT   H.sapiens gamma satellite DNA.
gaattctgggagccttccaaggagggctttctcatcccagacgcccccatatctgttccgggcaggctat
aaagcccaaggctttggagcagggtgcctgtttctctccaaantcgcatgactgcaggtcgactctagag
gatccccggcggaaggcccgacaagagaaacccgggccgcaggtggcgttggcgggccgaaggtactcag
gatgacgttaaggcaggaagaggagagccacggtgagatcgcagagaatggtcagagncctccctagaag
gccctctcccattccagaagccccccaggactttcccaggcagtgctgtaaagccaccaagctttggagc
caaggtgactgtgtctcttgaggaagggcccgccacaaccaaaaacgttgcccgcctgatggcgtgnctg
gcctgcagggactcagggggatgtggagncagncagaaaggagaancaacgagactgcaggaaatgctag
gancctcccaagaaggactttcttatcccaggagtttcaagggctgtcctggtcggnctgtaaancccca
ggccttggaacagggtgcctgtgtctctcattgaagnccccaacaagagaaaacggtgctgcagggtggc
gtgcgctggccgcagggactcaggaggatgttgagggagacagaggggtgaagcgttgagacgactggga
attc
>GSATX   centromeric sequence.
gaattccggatccaagtctactcttcagccttgntgattttttccttgggntgcctcaacctccccctga
aagtctggtgtcctgtaactgttcccctagggatatcttcccactttggggtgccccccatgggagaaac
acacacccttggtgaaagccagggactccacgacccccttgggcccggctctggaactgctggaaaggca
ctggtctctggtagagtacaccagcctcctattcggactcgccacttttttcctccagctgcctcaatgt
caccctgaaatcctggcatcgtgaccacgtccctcggggacttcttgtcatgttgggcgggccgcctgtg
gggacagacacacacaccctgtgtgaaagnccaggggactccacaacccctgcagggcccagganaggag
ctgctgggaaggtactggcctccagtggaagacttcagncctccatttcagcctcgccgcttttttcctc
aggctgcttcaacgtacccctgaaagcctggnatcctgtttcagtcactcgggatacttattnccacttt
ggggagctcccccgtaggagagacatgcaccctgcatgcgtggcctgagaaaaaagtggtgaggacaaag
aggagaccaggatgccccaccagaagacagcgctttcccggcagcccctgcgcatgacccaggtgggtgg
tggagtccctgaccccactaggggtgtgtgcctctcccacagaaggcaccacaaagcagcaagaagtccc
ccagggaacagagaaaggcagccaggctttcagaggggaggtttgaggcaggcttgggacaaaataggga
aggccaaaagaggacgcctgggtnccttcgccagaggtcagtgccttcctggaagctcccgagcccgatc
tgggggagtcctgacgtccctggccctcatgcagggtgcgtgtctctgccacagaaggcaccttnatgcc
gcaagaagtccccaggggacagagacaggcggccagnctttcagggggaggatgaagtaggcctgggaca
aaagcggcgaggccaaacgaggtcagggtgccccacaggaggtcagggccctcctaacaacccctgcgcc
caaaccgggggtgtcgtggagtccctggctcccaccaggggcacgtgtctctcccaccgaggacacccca
aagctgcaagaattc
>HERVL   sequence.
[encoded data, 5680 characters]
attatgtatgatctcaggagatgtgtatgggttcaagttgacaaggggtggact
>HERVK   Internal part of human endogenous retrovirus HERV-K; clone K-10.
[encoded data, 7313 characters]
gatggcggttttgtcgaaaagaaaagggggaaa
>HERVR   Baboon endogenous retrovirus (BaEV), internal part.
[encoded data, 7455 characters]
gatgaagaagctcaagattgagcctctaagacacaagaaaag
>HRES1   internal fragment.
ggctcgctggggataatatcgcagctgaaaccgaacatcaagctggcttttcaaaccttcagttatttac
attagactgagaggggaaaagcgctaagagtgcaagagcagagaaagagcaagaggaaacttgaaaaggc
ggatcacgcaatgcgctgtgcacacgcccccgccccgcgcacccgctaccccacccgagcccccagcggc
ccgcgtcccccatcccggtcccaagcccagacacctccgagatccgtcccgcggctccggccgcgccacc
gccaccctcaagacccccgcagcccaggcccggccccgcgccaccgacgccccccgcggcccgacccgcg
cgccccgccagcccgggcctcgtaccgtaggtttcggacatggccgtctgcgacatcttgggagcggcgc
cgcctctcgccgggtcaccgtgcactcgcccgcggtccgccggcgcgtctcggtggggaaggacctgggg
cgggggaccggaggagggaggggcccgaccggtccccacggcaaccgccggtcctcccagcggctgcggc
ccagccggactccagctccgcgcaggcgccagggccctccaccctccgtccggccgcgaccgcgaggagg
aagaggagatgggctacgcgaggcccggcccaccccgcgttcgcgcgtgcgcacggggaggccggggcgg
ggcgcgtgaggacttcggcgcgcgccggaagcacgtgcgcgggctgggcgctctggcggtgtgcgctgag
gtgggcagagcggcaggtgggggcgttgggggctgagtcccgatttccctgagggagggtcgggtagagg
cgggcggtgggcaggtttgggggtgacagagggctggggacagtggggtccagttgccggacagaggagg
aaggtgcccgcactggggaggaaagcagtccatttgccaaattggcccgtctcagttaagacgttgtctt
cggtcatcatctgcggctgtcagccaggaaaaaacttccctgacgctgttacgatggaggccagaacttg
gttaatgtgtaacaaggaggcagtaggccccaggtgtccagccagaggccgccctgtgaatgggaggcag
gttcatttacccgttggacccgttgggaagctaagctt
>HERVE   Human endogenous retrovirus; family HERV-E; internal part.
[encoded data, 7881 characters]
taagaactcccactaaaagtgaaaattctcaaagggggggaaa
>HERVH   Internal part of endogenous retrovirus RTVL-H (HERV-H family).
[encoded data, 7810 characters]
aagaaggcaggaa
>HERVI   Internal part of endogenous retrovirus RTVL-I (HERV-I family).
[encoded data, 7881 characters]
atttaacagggggat
>LTR14   LTR of human endogenous retrovirus HERVK(C4); LTR14.
tgttgggaaaaggacttgtggggtgcctgtataaactggccataaaaatatgggacaataagttgtggaa
agccacaagaggcctctgaggagaaaagcctcctaattgccacgctcagagcgagacctgctctctctta
tctgtaaacactgtattcaaggagaaagaccctcctttgaagcattggaatgtggacagacgtgcaggct
cctagttaagcccactcccactagctactctccgataagttaaagatatgctgtttgagcacaaaggaga
ttcatttaaagcgcttctgctgtagattatgcctgtgacgcactgctaccctttcactgttttgccctga
acatctgcttcttagatctaagttattgtactcaataaatagtgtggagaccagagctctgagccttttg
cagcctccattttgcaattggccccctggcctccactctttatgaactcttaacctgtctcttctcattc
ctttgtcaccaccagacttcaggtaccctacaggtggtgttgaggctggtccccaaca
>HERVKC4   Internal part of endogenous retrovirus HERVK(C4).
[encoded data, 5325 characters]
gggaggggggca
>MER4I   MER41I, MER57I and MER65I retroelements.
tggtaaccatggaagggattctgagtggagatgcccctgacctttgacaaatctcctatcggtgcttggt
accagcatgagctaactttatggcycaagctcaarwtrtctttatkgctcaaaccaataggacaatttgc
tgaggtctgrgagcatctccctccagagaatccctgatctcccaaaatttggtcgagatctaargtttat
tttgctgtacaactcctctttttttggagttttacttgcttccaacacaaggaaggcgagtttttcctgc
ttccatgatgatggaaggcaggtaactcctttmtggagtttsagctcgcttccaacagggaagrtgagtt
ttttttcctgcttctaggatggtagagagcagtcttcagcctgagacccattcctaggtaagtaactgaa
ttggggtttgtcttggaaattctccttcttggctaaaagttaagattaacaatcttggaaattctcctta
argactaaaagttaagattaacaaccagctggtcttaatttctccttaccattagagcgctcagtaatca
tataagttgtgcgatcatttgttttgcttaactgcttytgtttttgttgtttttgtttgtttctgttttt
gttgttgtttcwgtctttttcctattgggtttgaccaactctatccgacttgatcagtgtggtgggggga
gaaaaacggccagcaaaaggaaaaaattgancttgtttactttgactactaaatctgaaggagaattcca
aattatggggaacaaggcctctgaagtggctaaattcccacaaaaaaaaaaaaaaamaaaaaaaaaacaa
ggcyagctttttgctagccaggccaaactgaaagagcaatggctgtcaccycacgctgcagttcwatagc
taaggtyctgcnttttttttttttttcaccgtgacagcctgggtttggttcytaaatcaagccctttctg
gtttgatasttggtacttctgaaatagcagcwgtttgtcctagctaaaatatggtaatgagatttkaaag
gatttttttaaaggagctcaatggttaaaagtcagcttaattaaaaggctaacatccaagatgtatgtgt
gtatgtgtgcgtgtgtatgtgtgcatgtgtgcgtgtttgtatttaaaaggccttcatgtttttgtttcgt
cgtttgtttttctctcctaagaccttgtctttttttgagcaaagtttttttcttctcagttgactgaatt
ctgttttcttcatttacttttcttccaccctgttcctccttccctttgccatcttykgyaccaagtgaar
rgayctagaraaggcttctaatracttgagaccccttaaagaacwcagaaaaaggtgccacwcacccctt
tttgaggrtaaacttctgtttttccttatgggacctcaaaagtagtaaahagacagattcctctcaggtc
taaagctctgctytcttttgyattgcgttacctgattttttgactaaaatagttattgcaacagaggcta
ctcttgggtttttaaggaagagtgtagtgtagacacttagaaatgtctttgtttaaaaakttaagtrcac
tgtaaaagcatcatrtggyttagyctcatrataattctccctttttrgagacccagcattcagtgtgggc
tctgcccagagctcagtgrtccagttaaaaataggtagtctctatytaaataaaattggtctccttataa
aatcctatgatagatttctataattttatgtttratttggcatcaatytttaatcttcctctagcaccac
cagactttttctctctgtactttaagatgtaaattttgctatytgatttttcacctaagagttgtttcct
ttaatatgcaaatttagggctatttagctgacaactgcctagggtaatgaaacaggttatcaagaatttg
aaagtctaagataggaaaaaaaggrggtcttataaatctataagatgtacttctatcagcatgcctaata
cgtctatgtatttatgtgttgtgtacacaatgtttcactactaaaaatatataaaagagctctaattaat
tggcttaaagaaaaataaaagtgcttaaatcaaatactttatcaggaaaaaagaaaagactagtcaaatg
ctttttcaagttyatgaaatgctttttcaagtttatgtaacttaagtaaaatctttaataaataagctag
ctttaaaattattggtaaagtaatattagaaatgtcttaagaattgccagcatacatttttgtttgcatt
atattaatcaagcartttcatacttatccctgccaaatactataaaggtgtcaaaatttggcataggggt
tayaaaactataaacccagcccaaaacagaatgatctttgcttgtgtaatttttaataaataagacattg
atattggtttaatgaaaayagctrcatcttgaatttagtaagattaccataacttctaaccttgtggctt
taggcgrty*tttaaatgatgactatcgcagttttcataaataatctaggtaaacaattaataaaataat
taggtaaatgtaatgggataaatacttgtagacaaacttgtcataatttagaatataaagttatattaaa
ttaaataatagatawttwattatttgrgtattttccaataaaaatatattgtaggaaaacattcttkctt
aaaaaaaagtgtgtcctttttaaaaaaatggtgaataagttttgtctaattcaaagcttatttaaaggtt
atrtataaaacaaggtaaaaggaaccaggaaataaaaaaaatgtaaagaaagttataaaaataaagaggt
attttttgnargtaaaaaagctgaaaragaaataattttatatgagaaagaatcttatatggtaaattta
tgagaaagaatcttgtatggtaaatttttgtcctaaaataaaatgactggtttttaagaaagaggwtgtt
taggacaaatcagaaagtccaagcatgttatwaatggtctgtgtaagtcataataaggtttgcataaaga
gaaattaaaaaawtttatatgattaagttggctataattaaaagraaattatttataatagtctttctag
agattgakgtttgatattaaaaatacactaatacactaaaaattkgttagaaaaacaaaattttcttaaa
gtattgatttaytcataaaattacaagagattttaattttaatccaaaaattcaacttttattgcatctc
actgttttcaagctttttctcctctttgagaaggcctgagataataactctctccttcaacttttttgtc
agctcctgtaattttttcctchggttctaactgytgttgtggcctgatgctaaaaatgttttatyttaaa
ggtctaaaagmaatgttttcttccaatataacattctgtactckkcttttcttgatgtgtctgaattgtt
ccatgaaaccagaaaacttcactcataaccctggayacactcttccttgtctaattaattcaagtactat
tttcatcagtttgacttcaggttatctaaagggcttcccataaggagaagcaatcacactgcagaaggtt
tttcttttsctttttggtaactggcctaagaaaaagattttatgttttatcaagataatttttgtgttat
tattattaagtttttgatttgcttaggaaaactgagattaaaattttttaaattaaggttattacatcca
tgtatctttctgtattgcttttaaagtccttgtgacattgagttacagggctttaactcctgggtctaaa
aaggacaccaagtcctgctaaatcttaaacactgacagcaattaaagccycatcttcaggcccgtagaag
atgccaatcaaaataaactgcattcctgagacacaggaaattaaagctattcaactcctcaaggcccagg
gactatccagaagaggtgggcacgtgagattgtaagggccaattttgaaagataaaataagttcaragtt
tctctataaattaatcattaaaagtttctctataaattaatcattrawatcaaaggcacactgatgcaag
accagcatatgggcccctgtgtcagattaacaaggttttcttgaagcattaacckactccttaataaagg
ttgtaaaggttataaaaggcttatgraaattatatcttatggtcaagattaaaattttatagattgttta
taaaattttgaaaaacaaatttaattggcttcatgctgtttttattagggcttattgtttggaaaattaa
gtctcctctctcaaagaatgaaggtttttgccttttttgaaatccttgagttatcactttggttaaatga
atgacttattttacaatgacctgtgattctattttgtgatatcaagtgttttaaacctttgatatttgac
aaactttccaaaatcaaattataaattatgtctttctgacctaattaatcctttaagatattaggttcct
taaagtccaaaaatgacataatttggcttatttggtacaaaaattatayaggaagcattgtcaaatatga
aaaatgtttaancytctttgggttrtatttgtataaatatgttattggtatatgttccaaaattatatga
aactcctataattctgatatrtcttagtgtatattatcartaataattataattattatgttaaattatt
gtatgccacagargtaaccaaatttcctcgtcaattgtgtctttaactatggctgttctaagacttttgt
catccacggacaattgttttattttgrtcctytttaaaaggtagtttataatcagctatagractctaac
aagcgctcttaaatrcaggtttctgataactttggagattgtgacatcggaatagaggaaaaactttcag
gactcatggararctaatgtgttcatgaggattgctaacccaacatcgagcaagcagaacaggaattaac
tgcatggactgaaccaatagaagabtgaaadaatctttttgactttttgcttaaaacgttgctgatcctt
tgttttgtttttcagagtcaagaaaacttttcttttgagctatttacagcttttaacaattgagtatagt
atactcctatgaacaaaatttggagcatatttgtttctctctacctgatttctccagaatttggaaacta
tttgtgagtattcttaacttatggcaatacagttatttgcataagtgcaataagaatctgttttcatttg
taacaggacacaattggagaaactggttattttaccaaggctttgactggaatggtgtactttcctttaa
ggaatcaaacttgacttatggagccaataaaagcccttggaaaaactggcctcataccttgtbtacgcag
tccctgtacaaggtttctgacctgtggtaagtaaagaatgtcactttctgacaggcccaggagccccarg
tttatcttggaacctcaagaggagaggaaattcacccaattcataggtatttgawggcgcaaatccatgg
ctgggctcggctttaaaaaagtcttatctgagattccttctatggaaaaaagttccakcaaagccaattt
aaaaagagcctatataamaaatmattattcttgctgcactttatgcaaataatcaggccaagtataataa
gastaaaacttattttrhaaacaaattggtcctaccatgatttgtctttagtaaaaatgggaaactggag
agagaaaaattatgtttcaaaaactatagtatacctgttattagattctagttgtttttcaatttttatt
attttctacagtttggactgaattctaaattttttcctggctacaagtctccaaaataatgttttcaata
ctttttctttttttccttccwtttttcccatttttcctaatttaaaatcactraaaactaaagctgtgct
tktcttaaagccctgcaaactgaarctagacaacttaaacttcagaagaaaataatagcaacctatttac
atacataagccactttcatacctgcctactgatgtatngacttcagagtaatgtgrcctrtrtcaatttt
ccaggattgttcttttgtttgttgttgtttttctcccttcctcctcctattttstcttcataggacatga
gacttcacaacctgctaaaaatragctttcctaawawctcgggacctacccgtctaggaataaactatcc
tagccacgagagatcagacgaaacctgagaccagagactcattttcttctaaaatgctttctccaaaaga
ttttagaaaagaagggaa
>MER49   internal sequence belongs to the MER4I group; MER4 subfamily.
tgtaaactaaaaataaaatcttaagccccccgccgactgaacggaccccctcttggccaaggggacccca
gagaaaccttaaaaactgagttcccggccatgacgggatgggaggtcagacacgcctcattataccccct
cccttttgtggtttagacacaacaactgaccagcattaatgttaaaatagagatcataagactgacagaa
cggactctttgtggcaataagataccaaattataaacaggacctaaggccatgccaggcaagggttaagt
cacgcacccctacacttaaagaataaactatgttctaactgccacaaggtttttctttttctctaacagc
taaacaagcactggcctcgagataagcaatattaaaacaattgcagctcatccascaccagacgctgact
aactgaccccctgttccaccagccataactacagctttgattggacaagagactgatttcagtaactttc
tcctgataagagaccaccggccatggactggttctggccagtttacagaggctgtgcacttgcacgcctt
cgtgtcctgaaaasaccttttgacgtatagggcctaattgtaatacatttaaatgttaagtctccacccc
aaagtgaacatgggtcgtatgttacatgcatgtttgttcaatacgcatgcgtcaggaccaccttcatgaa
tattcatagctcctcctgtaacctgttgaatatgtatgcttagccaacccgttcagcataaagctcctgc
cccaacccctcctccttcgaagtgcctgtctctggtcttggccagaggctacgcttcccagcctgcggga
tggccaccttgcaggctgtaaccctttataagaaataaagtctcctttccaaatttatagatctcgtgat
ttttcagttgaca
>MER4D   Long terminal repeat of retrovirus-like element - a consensus.
tgtaaaccaaaaataaaattctaagccccccaaccgactgaatggacccccctcttggccaaggggatcc
caaagaaacctgaaaaactagttcaggccatgacgggaaggggggggtcggacatgcctcattacaccct
cctccctttggagtttaggcacaactgaccagcattaacattaaaacagagatcttaagactgacaaaac
agactctttgtagcaataagataccaaattccaacctgactctggtatagcatcacatgacagatagcag
gccctgaaggaaatcaaagtattttaccccaaaatatatttctttgacatattttgaaatggccctgcaa
agctgtctcttgtgggggaaatttgcattctgtagagaatctccttcccttactaggtcttttccggaga
gtctgacaccttttaaggtccgataagagacattcaccatctattctctctgaagcctgctacctggagg
cttcatctacatgacaagaaccttggcttccacaaccccccttatcttaactcaagctgacttcaactct
tcaggcagagcttaactctttcaaccaattgccaatcaggaaatctttgaatccacctatgacctggaag
cccccgcttcgagatgtcctgcctttccgggccgaaccaatgtataccttacatgtattgatttatgtct
ttgcctgtaacttctgtctccctaaaatgtataaaaccaagctgtaacccaaccaccttgggcacatgtt
ctcaggacctcctgaggctgtgtcacaggccatggtccttaaccttggcaaaataaacctctaaattgat
tgagacctgtctcagatactttttggtttaca
>MER39B   Long terminal repeat of retrovirus-like element - a consensus.
tgttggggctcagaaaacaataccccaaaatgaaggcctcagaagcagcctcagaagcaaaagtttttct
ctgaccttctcctgccctcctgtctctcagtcccattctcccccgaggctagccatagaaactagaatcc
ctcttccccaaggcgggtcatagaaaccagaaccccttttccccaaagccagccataaaacctaaaaata
ttactctaactttccctccgcctttctgtgtaaaaactggccataaagaaattatctgacctaccttgtt
tgactgtaggtcataagacccccattccagagagggtcctgccccacacccagaaagaaggaatgcgtgc
tcagagaggccaagaagaatctagacagacaggccttgctgggtttccccactcagtctattagcattag
atcataccctttttgtccaatcatatttctacacggctgtccatactttgttgaacctaagcataaaaat
ggacaatttcccctgtatctttgggtcttcattctgaaggctcccgtgtatatacatgttaaataaattt
gtatgccttttctccwattaatctgccttttgtsagttgatttttcagtgaamcttcagagggccaaggg
gaagttttcccttggcccctaca
>IN25   a consensus.
gtggaaagttcctcatagcagagacacaattgcagtgctgggtacagtagggaaagtctgcacctttacc
ccaacaggcaggcagcctctgtgatcatgaagggtcttggagaagggatccttgttccccnctggcnctg
gtannccactgcagacacagctggggcttctcccacaggaacgcagcatggatgcacctatagacagcat
tcctggaacaattcagggtgattgcagccccacaggaggagcactctccagattcaggcctncatgagag
gcagtcacaattcctccctacttggaacatcaanattnctacagatgaaaagaggtgcctgtctgatctg
aatagctggaacactgggacaggagtgaggctgtgaggtggacagntttcctgctgacctggcangngan
ctgaggtagctcccacccttcaccctganaaaacctcagcacatctaattgagagctcncccagccaccc
tcatcaaggctgggacctttgcccactattggatattaaatctacccacctactttagctacanctggtg
cctacccagggatacctcccttattgccctnaagcctgaatcatcaactcagtaaataaaatactgnsga
gggaaaaattaaataaataaataaataaagtgtacacyackagagaacgagataagcttcawgagaycyc
tgccattccaacyccataggagacagtgaactcgcycacacaccaaghacgtmactactacaaccagcat
ctgrgaaakycakcacacaaagactctctataacyaaggaactcatacagagtcttcacccctamaagca
ccmagagycaaatt
>MER61   internal sequence belongs to the MER4I-group; subfamily MER61.
tggtagtgagacagccagatgggaaggggtccccggagaaactccaaccggcctgcgcactgggaggart
gcgcactggggtggagccacagaagttcgcgccatttgcagcggggaggagcctggcccctcctcttcct
gggtggaacctgggattcgaactgcgaggcgggaagtscactagcaggaarcacagtctctcrctttgct
gagrgtccctgtttccccttttcttccttttcacysaataaaaycycgycttactcacccttcaaattgt
ctgcaagcctaawttttcgtggccgtgtgacaaggaccccgtctttagctgaactaaggaaaagtcctgc
aaca
>HERV3   Internal sequence of primate endogenous retrovirus HERV3 - a consensus.
[encoded data, 8520 characters]
tttataaaaagcatcaaaggnggnaa
>HERV9   Internal sequence of endogenous retrovirus HERV-pHE1/HERV9.
[encoded data, 8519 characters]
>HERVS71   Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 9088 characters]
ctgcttgtctctttaatc
>HSMAR1   Human mariner - a consensus.
ttaggttggtgcaaaagtaattgcggtttttgcattgttggaatttgccgtttgatattggaatacattc
ttaaataaatgtggttatgttatacatcattttaatgcgcatttctcgctttacgtttttttgctaatga
cttattacttgctgtttattttatgtttattttagactatggaaatgatgttagacaaaaagcaaattcg
agcgattttcttattcgagttcaaaatgggtcgtaaagcggcggagacaactcgcaacatcaacaacgca
tttggcccaggaactgctaacgaacgtacagtgcagtggtggttcaagaagttttgcaaaggagacgaga
gccttgaagatgaggagcgtagtggccggccatcggaagttgacaacgaccaattgagagcaatcatcga
agctgatcctcttacaactacgcgagaagttgccgaagaactcaacgtcgaccattctacggtcgttcgg
catttgaagcaaattggaaaggtgaaaaagctcgataagtgggtgcctcatgagctgagcgaaaatcaaa
aaaatcgtcgttttgaagtgtcgtcttctcttattctacgcaacaacaacgaaccatttctcgatcggat
tgtgacgtgcgacgaaaagtggattttatacgacaaccggcgacgaccagctcagtggttggaccgagaa
gaagctccaaagcacttcccaaagccaaacttgcaccaaaaaaaggtcatggtcactgtttggtggtctg
ctgccggtctgatccactacagctttctgaatcccggcgaaaccattacatctgagaagtatgctcagca
aatcgatgagatgcaccgaaaactgcaacgcctgcagccggcattggtcaacagaaagggcccaattctt
ctccacgacaacgcccgaccgcacgtcgcacaaccaacgcttcaaaagttgaacgaattgggctacgaag
ttttgcctcatccgccatattcacctgacctctcgccaaccgactaccacttcttcaagcatctcgacaa
ctttttgcagggaaaacgcttccacaaccagcaggatgcagaaaatgctttccaagagttcgtcgaatcc
cgaagcacggatttttacgctacaggaataaacaaacttatttctcgttggcaaaaatgtgttgattgta
atggttcctattttgattaataaagatgtgtttgagcctagttataatgatttaaaattcacggtccaaa
accgcaattacttttgcaccaacctaa
>HSMAR2   Human mariner - a consensus.
cgaggggtcttcaaaaagttcatggaaaatgcgtattatgaaaaaactatgcatggatttcaaaaatttt
ttgcaccaaaataaactcgtactaacttgttataacatgtctgaacaggatctagtttgaggcactaaga
aggataagacatcagtttgaaaagagcccctatcagagcaacatgaattctgctaaaattgaagcaagaa
caaacatcaaatttatggtgaagcttgggtggaagaatggtgaaatcactgatgctttacgaaaagttta
tggggacaatgccccaaagaaatcagcagtttacaaatggataactcgttttaagaagggacgagacgat
gttgaagatgaagcccgcagcggcagaccatccacatcaatttgtgaggaaaaaattaatcttgttcgtg
ccctaattgaagaggaccgacgattaacagcagaaacaatagccaacaccacggacatctcaattggttc
agcttacacaattctgactgaaaaattaaagttgagcaaactttccactcgatgggtgccaaaaccgttg
cgcccagatcagctgcagacaagagcagagctttcaatggaaattttaaacaagtgggatcaagatcctg
aagcatttcttcgaagaattgtaacaggagatgaaacgtggctttaccagtacgatcctgaagacaaagc
acaatcaaagcaatggctaccaagaggtggaagtggtccagtcaaagcaaaagcggactggtcaagagca
aaggtcatggcaacagttttttgggatgctcaaggcattttgcttgttgactttctggagggccaaagaa
cgataacatctgcttattatgagagtgttttgagaaagttagccaaagctttagcagaaaaacgcccggg
aaagcttcaccagagagtccttctccaccacgacaatgctcctgctcattcctctcatcaaacaagggca
attttgcgagagtttcgatgggaaatcattaggcatccaccttacagtcctgatttggctccttctgact
tctttttgtttcctaatcttaaaaaatctttaaagggcacccatttttcttcagttaataatgtaaaaaa
gactgcattgacatggttaaattcccaggaccctcagttctttagggatggactaaatggctggtatcat
cgcttacaaaagtgtcttgaacttgatggagcttatgttgagaaataaagtttatatttttaatttttat
cttttaattccattttccacgaactttttgaagtcccctcg
>L1   Primate L1 consensus.
[encoded data, 5467 characters]
atgctcatcatca
>L1MA10   3'-end of L1 repeat (subfamily L1MA10) - a consensus.
ttaatatccaaaatatataagaaactcctacaactcaataaaagaaagcaaataacccaattaaaaaacg
ggcaaaggacctgaatagacatttctccaaagaagacatacaaatggcaaacgggtatatgaaaaaatgc
tcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatatcacctcacacctgttagaa
tggctattatcaaaaaaacaaaaaataacaagtgttggcgaggatgtggagaaawtggaacccttgtaca
ctgttggtgggaatgtaaaatggtacagccactatggaaaacagtatggaggttcctcaaaaaattaaaa
atagaactaccatatgatccagcaatcccacttctgggtatatatccaaaagaattgaaatcaggatctc
gaagagatatctgcactcccatgttcattgcagcattattcacaatagccaagatatggaaacaacctaa
atgtccatcaacggatgaatggataaagaaagtgtggtatatacatacaatggaatattattcagcctta
aaaaagaaggaaatcctgccatttgcaacaacatggatgaacctggaggacattatgctaagtgaaataa
gccagkcacagaaggacaaatactgcacgattccacttatatgaggtatctaaaatagtcaaactcatag
aagcagagagtagaatggtggttgccaggggctggggggagggggaaatggggagttgttgttcaatggg
tataaagtttcagttatgcaagatgagtaagttctagagatctgctgtacaacatagtgcctatagttaa
caatactgtattgtgcacttaaaaatttgttaagagggtagatctcatgttaagtgttcttaccacacaa
caaaaaaaaagcacaaggaaacttttggaggtgatggatatgtctattaccttgattgtggtgatggttt
cacgggtgtatgcatatgtccaaactcatcaaattgtatacattaaatatgtgcagttttttgtatatca
attatacctcaataaagctgtttaaaaaaa
>L1MB3   3'-end of L1 repeat (subfamily L1MB3) - a consensus.
ttaatatccaaaatatataaggaactcctacaactcaacaacaaaaaaacaaataacctgattaaaaaat
gggcaaaggacttgaatagacatttctccaaagaagacatacaaatggccaacaggcacatgaaaagatg
ctcaacatcactaatcattagggaaatgcaaatcaaaaccacaatgagataccacctcacacccgttagg
atggctattatcaaaaaaacagaaaataacaagtgttggcgaggatgtggagaaattggaacccttgtgc
actgttggtgggaatgtaaaatggtacagccgctatggaaaacagtatggcggttcctcaaaaaattaaa
aatagaattaccatatgatccagcaattccacttctgggtatatacccaaaakaattgaaagcagggact
cgaacagatatttgtacacccatgttcatagcagcattattcacaatagccaaaaggtggaagcaaccca
agtgtccatcgacggatgaatggataaacaaaatgtggtatatacatacaatggaatattattcagcctt
aaaaaggaaggaaattctgacacatgctacaacatggatgaaccttgaggacattatgctaagtgaaata
agccagtcacaaaaggacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaatgccactgaactgtacacttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaaaaa
>L1MB7   3'-end of L1 repeat (subfamily L1MB7) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagccattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctataatmaaaaagacagacaataacaagtattggcgaggatgtggagaaattggaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactttggaaaacagtttggcagttcctcaaaaagttaaa
catagagttaccatatgacccagcaattccactcctaggtatatacccaagagaawtgaaaacatatgtc
cacacaaaaacttgtacacaaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatccatacaatggaatattattcggccat
aaaaaggaatgaagtactgatacatgctacaacatggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggccacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctggggggaggggggaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctgaaattagatagtggtgatggttgcacaactctgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaagctgttattttaaaaa
>L1MC2   3'-end of L1 repeat (subfamily L1MC2) - a consensus.
ctgktatccaaaatatacaaagaactcttaaaactcaacaataagaaaacaaacaacccaattttaaaat
gggcaaaagatctgaacagacacctcaccaaagaagatatacagatggcaaataagcatatgaaaagatg
ctcaacatcatatgtcattagggaattgcaaattaaaacaacaatgagatatcactacacacctattaga
atggctaaaatccaaaacaccgacaacaccaaatgctggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggcacagccactttggaagacagtttggcagtttcttacaaagctaaa
catantcttaccatacgatccagcaatcgtgctccttggtatttacccaaatgagttgaaaacttatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaagcaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaagaaatgagctatcaagccatgaaaagacatggaggaaacttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaactatatgacattctggaaaaggcaaaactatgg
agacagtaaaaagatcagtggttgccaggggttcagggggagggagggagggatgaataggtggagcaca
ggggatttttagggcagtgaaactattctgtatgatactgtaatggtggatacatgwcattatacatttg
tcaaaacccatagaatgtacaacacaaagagtgaaccctaatgtaaactatggactttagttaataataa
tgtatcaatattggttcatcaattgtaacaaatgtaccacactaatgcaagatgttaataataggggaaa
ctgtgtgngggnggggtgagggggtatatgggaactctctgtactttctgctcaatttttctgtaaacct
aaaactgctctaaaaaataaagtctattaattttttaaaaa
>L1MC3   3'-end of L1 repeat (subfamily L1MC3) - a consensus.
cttgtatccaaaatatacaaagaactcttaaaactcaacaataagaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaacagacgcctcaccaaagaagatacacagatggcaaataagcatatgaaaagatg
ctcaacatcatttgtcattaaggaattgcaaattaaaacaacaatgagataccactacacgcctattaga
atggctaaaattcaaaaaactgacaataccaattgctggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttacaaagctaaa
catagtcttaccatataatccagcaatcgtactcctaggtatttacccaactgatttgaaaacttatgtc
cacacaaaaacctgcacgcaaatgtttatagcagctttattcataatcgccaaaaactggaagcaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgagctatcaagccataaaaagacatggatgaatcttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaattatatgacattctggaaaaggcaaaactatag
agatggtaaatagatcagtggttgtcaggggttcgaggagtaggggnaagggttgaataggtgaagcaca
ggggattttttagggcagtgaaactattctgtatgatactgtaatggtggatacatnacactatacattt
gtcaaaacccatagaactttacagcacaaagagtgaaccttaatgtatgcaaattttaaaaaatcattta
ggagattgggggatcccaggatggaatgcagaatgtgacaaaanaatctaactgtatcacaaatgtatga
aacaacctcactgaagggaatgggggaaaaaggtgctgacctaagtaactttggaaatgagtggagtctg
taagactaaaggcaaaaggaactgcacataagcactgtactctagttgataaagttgtttcccatggggg
tatgggttaacaattctgataccgctatacatgtatactggaattgaacaattaagtaaatggatggtgg
atggtgggagccaggtttctcactgttggagtgggaggttacagataagcaaggggaggaggctagaatg
atccntgtggtaatggattagagttggagacatcagtatgaactcatgtttagcttaatatagatacaga
tggttacatatagaaatatttatagatatgtgtatatacacaggttagtatacacacatatatttccttg
ctctgtcagctgagagggcctagaagmaacgacaccccagtagcaatgagcacacctagcgcccagatct
tggtttctaataccattctccaataaaaggaaccagggctccttggagaaatggctgattctaggactgg
ggcaggaaatatacaagatgagcctggagcatcttgtagtgccagaaagtaaggaagtgctcaaaaaaac
ccacaatgatgggggtatgtcaaagggacacaggagccaactgaaagagctcccaatggccaaagctgga
acaatttgagcaacaaaataaataaagtagtattggattataacccaaagtataaaataaatatccatga
gtccatactgatataaataaatgattgaataaataaataaatgaggaagaagagacaaatctcccgtgca
gaagaattccaaataatttatgtagatactccgccctcaaggaggtggagcataactccccactccttaa
gtgtgggctgcgcatagtgacttccttccaaagagtacagtatggaaagkggggaaaaaagagtaacttt
acagtggagaaacctgacaaacactacctcagccaggtgatcaaggtcaacatcaacagtgataagtcat
gttgatagtatgtacccttgatatgatgtgatgagaatggcactttacctctgtggtcttcctcccmaaa
acccataaccccagtctaatcatgagaaaaacatcagacaaatcccaattgagggacattctacaaaata
cctgaccagtactcctcaaaactgtcaaggtcatcaaaaacaaggaaagtctgagaaactgtcacagcca
agaggagcctaaggagacatgacgactaaatgtaatgtggtatcctggatgggatcctggaacagaaaaa
ggacattaggtaaaaactaaggaaatctgaataaagtatggactttagttaataataatgtatcaatatt
ggttcattaattgtgacaaatgtaccatactaatgtaagatgttaataataggggaaactgggtgtgggg
tatatgggaactctctgtactatcttcgcaatttttctgtaaatctaaaactattctaaaataaaaagtt
tattttwaaaaa
>L1MC4   3'-end of L1 repeat (subfamily L1MC4) - a consensus.
ctaatatacctaatatacaaaaaactcttaaaattgaaggataaaaagncaaaaaccnaatannaaaatg
ggnaaaagacatgaacagacaattcacnaaaaatnataaaatggcccttaagcatataaaaagatgttca
ncctcacntataattagagaaacgcaaattaaaactacaccgagataccatttctcacccancagatcgg
caaaaattaaaaagtatggcaatatannctgttggcgaggctgtggggnaacnggnactctcatacactg
ctggtgggagtgcaaattggtacaactnctttggaaganaatttggcagtntctaataaaactacacntg
cntttacactttgacccattagtcccacttctagaaatttaccctanagaaatacttctaacagntcaaa
aatacacatgtacagggatgttcatagcagtnttattnntaatngtaaaanattggaaacaatcnaaatg
tccatcagcaggagaatggntgaataaactatggtncatccacacaatggaatactatncagctgtaaaa
aagaatgaggaagatctctgtaataatgtggagngatttcggaacatnntnttnagttgaaaaagcnang
cgcaaaagagtatatatantatgctacccttcatataagaaagaaggggatatgagaaaatatacatata
tctgctcatttgtgcaaaaagaaacacagaaaagataaancaganactaatgagattggttacccacagg
gaannggtgggaatggggaggaaaggacggaaggaatggggggcagtgacacttttctgagtataccttt
ttgtatagttctaacttttgnaaccatgttaatgtttcacatactcaagaaatgaataantaaaatcaac
aaggatggggganaactcaaaatgaaatacaaacagaaacaaatgaaccwaactgtatttcaaatgaata
acataaccacactgaagggggtnaggaagaaaagaactaacccaagtaacttttgaacacagtattttga
ctatatgccctcaggctaaagacaaaaagaactntaaacaaatattgaactctagttagtaggcttattt
tccgcagnggcatgggttagcaattctgaaactactttctgtatattctaggactgagcaaataagtaaa
tatattgnggataatgggagccaggtttctcactgtcggagaagggagttacaaatatggaaagggggaa
gactagaatgaaccctgtggtgttggattggaattggaggtatcagtgtgaactcatggtttttaatata
natagatatacagacagacagatatagaaatagatatagatatatatgtgtntgtgtatatgtgtatgta
tatacgtacatatatttcctagctctgtccactgagagggcctagaagcaatgacaccccagtagcaatg
agcacacctagcgcccagatcttggtttctaaataccattctccactaaaaggaaccagggctccttgga
gaaatggctgattccagggctggggcagggaaagtacaagatgagcctggaacatcttgttgtgccagaa
agtaaggaagtgctcaaagaatgatggggacatgtcaaaaggacacaggagccagcttgaaggggctccc
actggccaaatctgggacaatttgagcatcaaaataaataatgatagtaatggattataacccattgaat
aaaataagaatccatgagtccatactgatataaataaataaataaataaatgggggagaagggaaagctc
ttccttacagtagaatgccaactaataaatgtagaaggaatgatggaattagaaaatcaccatttggcaa
ccatcatagtaataattgattcaggcaagaatcatcaatggatgctaaaactagtgggtgaaagtttgat
gagnaacaggatatttacatagtctcaaagtatctccccacaaaatacttattaattacaaaggggaaaa
tagtaactttacagtggagaaacctggcagacaccaccttaaccaagtgatcaaagttaacatcaccagt
aatgggacaaatcgacatcatgtgcctcctgatatgatgcactgagaaggacacaacatcacttctgtgg
tattcctgccaaaaatgcataacctgaatctaatcatgaggaaacatcagacaaacccaaattgagggac
attctacaaaataactggcctgtactcttcaaaaatgtcaaggtcatgaaagacaaagaaagactgagga
actgttccagattaaaggagactaaagagacatgacaactaaatgcaacgcgtgatcctggattggatcc
tggaccaganttttttttgctataaaggacattattgggacaactggcgaaatttgaataaggtctgtag
attagataatagtattgtatcaatgttaatttcctgattttgatnattgtactgtggttatgtaagagaa
tgtccttgtttttaggaaatacacactgaagtatttaggggtaanggggcatcatgtctgcaacttactc
tcaaatggttcagaaaaaaaaatatgtatatgnanacagagaatgataaagcaaatgtggcaaaatgtta
acatttggggaatctgggtgaagggtatacgggaattctttgtactattcttgcaacttttctgtaagtc
tgaaattatttcaaaataaaaagttaaaaaa
>L1MD1   3'-end of L1 repeat (subfamily L1MD1) - a consensus.
ctagtatctagaatatataaagaactctcaaaactcaacagtaaaaaaacaaacaatccaattagaaaat
gggcaaaagacatgaagagacatttcaccgaagaggatatacagatggcaaataagcacatgaaaagatg
ttcaacatcattagccattagggaaatgcaaattaaaaccacaatgagatatcactacacacctatcaga
atggctaaaataaaaaatagtgacaacaccaaatgctggcgaggatgtagagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaacagtttggcagtttcttaaaaaactaaa
catgcaactaccatacgacccagcaattgcactcctgggcatttatcccagagaaatgaaaacttatgtt
cacacaaaaacctgtacacgaatgtttatagcagctttattcgtaatagccaaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtacatccataccatggaatactactcagcaat
aaaaaggaacgaactattgatacacgcaacaacctggatgaatctccagagaattatgctgagtgaaaaa
agccaatcccaaaaggttacatactgtatgattccatttatataacattcttgaaatgacaaaattatag
aaatggagaacagattagtggttgccaggggttaaggaggggggtgggggcaggagggaagtgggtgtgg
ctataaaagggcaacatgagggatccttgtggtgatggaaatgttctgtatcttgactgtatcaatgtca
atatcctggttgtgatattgtactatagttttgcaagatgttaccattgggggaaactgggtaaagggta
cacgggatctctctgtattatttcttacaactgcatgtgaatctacaattatctcaaaataaaaagttta
atttaaaaa
>L1MD2   3'-end of L1 repeat (subfamily L1MD2) - a consensus.
ctngtatctagaatatataaagaactctcaaaactcaacagtaaaaaaacaaacaatccaattagaaaat
gggcaaaagacatgaacagacatttcactgaagaggatatacagatggcaaataagcacatgaaaagatg
ttcaacatcattagccattagggaaatgcaaattaaaaccacaatgagatatcactacacacctatcaga
atggctaaaataaaaaatagtgacaacaccaaatgctggtgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaacagtttggcagtttcttataaaactaaa
catgcamttaccatacgacccagcaattgcactcttgggcatttatcccagagaaatgaaaacttatgtt
cacacaaaaacctgtacacgaatgttcatagcagctttattcgtaatagccaaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtacatccataccatggaatactactcagcaat
aaaaaggaacgaactattgatacacgcaacaacttggatgaatctcaagggaattatgctgagtgaaaaa
agccaatcccaaaaggttacatactgtatgattccatttatataacattcttgaaatgacaaaattatag
agatggagaacagattagtggttgccaggggttagggatgggggtggngngggggaagggaggtgggtgt
ggctataaaagggcagcacgagggatccttgtggtgatggaactgttctgtatcttgactgtggtggtgg
ntacacgaatctacacatgtgataaaattgcatagaactaaatacacacacacacacatgagtacacgta
aaactggkgaaatctgaataagatcggtggattgtatcaatgtcaatttcctggttgtgatattgtacta
tagttwtgcaagatgttaccattgggggaaactgggtgaagggtacacgggatctctctgtattatttct
tacaactgcatgtgaatctacaattatctcaaaataaaaagtttaatttaaaaaaa
>L1ME2   3'-end of L1 repeat (subfamily L1ME2) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaataataaaaagacaaacaacctaattaaaaaat
gggcaaaaaacttgaacagacacttcacaaaagaagatatacgaatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagactgacaanaccaaatgttggcgaggatgtggagcaactggaactctcatac
attgctggtgggagtgtaaaatggtacaaccactttggaaaacngtntggcagtttcttataaagttaaa
catgcacctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacaaaaagacttgtacawgaatgttcatagcagctttattcataatagccaaaaactggaaacaaccca
aatgtccatcaacaggagaatggataaacaaactgtggtatattcatacaatggaatactactcagcaat
aaaaaggaacgaactactgatacacgcaacaacatggatgaatctcaaaaacattatgctgagtgaaaga
agccagacacaaaagagtacatactgtatgattccatttatatgaagttctagaacaggcaaaactaatc
tatggtgatagaaatcagaacagtggttgcctctggggagggtgantgactggaaaggggcatgagggaa
ctttctggggtgatggaaatgttctatatcttgattggggtggtggttacacgggtgtatacatttgtca
aaactcatcgaactgtacacttaagatctgtgcatttcactgtatgtaaattatacctcaattttaaaaa
a
>L1ME3A   3'-end of L1 repeat (subfamily L1ME3A) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaaccgaaactctcatac
attgctggtgggagtgtaaattggtacaaccactttggaaaattgttwggcagtatctactaaagctgaa
catacgcataccctatgacccagcaattccactcctaggtatatncccaagagaaatgcgtacatatgtt
caccaaaagacatgtacaagaatgttcatagcagcactgttcgtaatagcccmaaactggaaacnaccca
aatgcccatcaacagtagaatggataaataaattgtggtatattcatacaatggaatactacgcagcaat
gagaatgaacgaactacagctacacacaacaacatggatgaatctcacaaacataatgttgagcgaaaga
agccagacacaaaagagtacatactgtatgattccatttatataaagttcaaaaacaggcaaaactaatc
tatgstgttagaagtcaggatagtggttacccttgggaaggggtagtgactagaagggagcacatgaggg
gctttctggggtgctggtaatgttctgtttcttgatctgggtgctggttacacgggtgtgttcastttgt
gaaaattcatcgagctgtacacttatgatwtgtgcacttttctgtatgtatgttatacttcaataaaaag
ttaaaaa
>LSAU   Satellite repeat.
cgtcggaaggtgttgggagagcctcagccggaatttcgtggacggacaagggcacagagagcccagcggg
ctcccttgcatgtcagccggggtgcacaatgagcacaggtctagccaggaggccggcaaagagagctaga
ggtctgcgttccgccgccaggctctccatggtggcagctgggaggatgcaggggcatgggcgggccggcg
acgttgcacggagacgcagaggaggtgagtcactgggggggtgtcaggcctggacgctgtgcgggcccag
tgttttcgcgggaagagggtctccacccagcccaggggaggagcgcattttcagggggttggtggtgagg
ctggggatggtgtgctcaggcaggggtgtgatggaggaaaggcaggagagctctgccctggtgctcccgc
tgcccaggcggctaacttgcaaacccgcgcatgtgcagaggcagctcacctgtgggtacctgggccggct
ctgggatc
>LTR1   LTR from human endogenous retrovirus-like sequence (HUERS-P2).
tgatacggacaggrgrgggaartgctgggtagaggagggcgggktccctggctagggctccaccctcggg
cctgtgcccacggacctaggtgaggacaggcatttytgttttcccgcccaaatgttgcatttyccaagac
cacccytggcctgccacgccccccatcctgtgcctataaaaacccgagaccytagcrggcasasacacaa
gcggctggacgtcaagaggaacacaccggcggaagaacacactgacggtggcgccggcaggccatcgact
ggcggaacsattcgganttcggcaggggcggycggaggacagctggarracagccaggccgctgagcggc
cggactccaggggaaraycaccttcccactccatcycccttccggctcccccatctgctgagagctactt
ccactcaataaaaccttgcactcattctccaagcccacgtgtgatccgattcttccggtacatcaaggca
agaaaccccgggatacagaaagccctctgtccttgcgacaaggcagagggtctaactgagctggttaaca
caagccgcctatagatggcaaactaaaagagcaccctgtaacacacgcccactggggcttcaggagctgt
aaacattcacccctagacactgccgtggggtcggagccccacagcctgcccgtctgtatgctcccctaga
ggtttgagcagcggggcactgaagaagcgagccacacccccatcgcacgccctgtgagggggacaaggga
acctttcccatttca
>LTR15   LTR from a human endogenous retrovirus HSRIRT.
tggaacaggaattaaaagaaattaaagaatgcataagcaaaaactcaattgtatgtagggaaacccaatt
cctcctgaggaagagaaagaggtggagtcctttaaaaattcactgcctgtttttccgtctgtagctagtg
agccttatctctccctttcccaggcattgtgaagaccctgtttctccagctgtgcagctgcatggtcact
agacagataaactcaagttgtaaaacatgtttttccttgaaaagtaagaaatgatgtaatacatgtctca
actgaataactgtctttgtttctcacttctgtagtaagcttccccctgcacagatctcccctctcacccc
atgaaatgcttaaaaggtaacctgactctttgttcagggctcagtcctttggatgttaatctgactgggc
tggtgcacctaaataatamatayatcctcctcaaccccatcggtctctctgattcctaaatcatccccaa
aca
>LTR8   LTR from human endogenous retrovirus-like sequence (HUERS-P3).
tgaaaccgcctttgcaaaattatgactgagacagtgaaagagatctaacttwactgactccatcttgctt
ctaacctccaagctgtccttgttcattcctgggcgtaggctgaactaactttgggagaaacttagtttat
agtttatagtttaaacaaagacggtaacagccctttcccaaagcagacctccttcttgcctggggactag
attgcctttgtaggactaacattagccgcaagattagaaattatggtttaggagtcatgcagctggaggc
tacaagattctgaccctccctaaactgctcctaagatcagtgcttgagatattttgcagaccctgcgctt
gatggatcagctggcaccacccagatcaataaactggctcatctgatcttgtggcccccacccaggaact
gactcagcgcaagaagacagctycaactycctatgatttcatcyctgaccaatcagcactcctggctcac
tggcttcccccnacccaccaagttatccttaaaaactctgmtccctgaatgctcagggagactgatttga
gtaataataaaactccggtctcccgcacagccggctctgcgtgaattactctttctctattgcaattccc
ctgtcttgatgaatcggctctgtctaggcagcgggcaaggtgaacccmttgggtggttaca
>LTR9   Long terminal repeat of retrovirus-like element - a consensus.
tgatacaggagttaagaagaaatcacttaggcagatagtaagggtatgggagtcctcggtaaggcttttc
tttttaatgaaaagcagccccaaatcattttctaacaaagagcagcctgtaaagtcgagctgcagacata
gacaagcaagctgggagcttgcacgggtgaatgccggcaggaactagggactagacatgttcaagatggc
ggctccatcttcccttctctgccagccacgtgtacagtaaggagcagacaagatggcgccggccaagtgg
aaagcccatttgcataataagattagggtggggcgaccagccttccccgcgcgctatgtaaacgtcatac
ctgatcgaaccaatctgtgagccctacgtaaatcagacaccgcctcctcaagccggactataaaatccgg
cgcatccgccaccagccggtcctttccgctcggaagacccctctctctatagagagagctgtttctcttt
ctcttctcttctgcctattaaacctccgctcctaaactcctcgtgtgtgtccgtgtcctaaattttcctg
gcgcgngacgacgaaccccggggtatataccccagacaacgtagccgcttca
>MER31   internal sequence belongs to the MER4I group.
tggtgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaagccc
cgaccttgggcyctgtccttggcctgcwnagtccagttttagcaagaatcctgctaagtcagtttagaga
gaatcccccaccctcgatatctgatcaggttcctcatcctccgccatcccccaggcgatgtctgatcacc
ctggcctgccttcagcaagaatcctgttaggtcagtttagcmagaatccccctacccctgatgtytcctc
ttagtaattttccatccactgacccccaccctgctccttggctataaatccccacttgtccttgctgtat
tcggagttgagcccaatctctctcccctactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtctgccttaccgtgctttaacaagtgtcgttgaataattttctctgaca
>MER34   a consensus.
tawtgaaggagatcagaatatgccaccccaaaatatgccactttggcataaggattattttgagctaaag
gcacttgagaaacagcagrtgcaagaagagcactctgaccttcctcttttcttcctgaaagcaggagata
aaactcccatgtgaaagacgttctctctataccaggaggaaggaaacattcttatcgtcagagacgggga
gtcgaggccgagggaaatctgtacgaacaaaccttgttaaactaacyctyatcttcctagtcacttctcc
acgatgaaccgccctagcccaaacccctttgtcttgtcacgttttcacaatttactactctttgtccaac
ctagtatawaagcgttcgactctaaccgcttctttgggtcttcatttccttatgagggctcccatgtaca
tgtaaaacatacttaaataaatttgtatgcttttctcctgttaatctgtcttatgtcagtttaattatcg
ggcccagccggaaactctaagagggtagaggwaaaatttttccttcyctnccatgg
>MER41A   internal sequence belongs to the MER4I group; a subfamily.
tgtcagagacgtgtgaaccagagcaactccatcttgaataggagctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctacactcccaccagcaccatgacagtttacaaatgc
catggcaacgtcaggaagttaccctatatggtctaaaaaggggaggcatgaataatccaccccttgttta
gcatatcatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctgtctatggagta
gccattcttttattcctttactttcttaataaacttgctttcactttactctrtggactcgccctgaatt
ctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttgtaaca
>MER41B   internal sequence belongs to the MER4I group; subfamily MER41B.
tgtcagaggcgtttgaaccagagcaactccatcttgaataggcgctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctcattatatgytaattataatgcattagcatgctaa
aagacactcccaccagcaccatgacagtttacaaatgccatggcaacgtcaggaagttaccctatatggt
ctaaaaaggggaggaaccctcagttccgggaattgcccgcccctttcctkgaaaaytcatgaataatcca
ccccttgtttagcatataatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctg
tctatggagtagccattcttttattcctttactttcttaataaacttgctttcactttactctrtggact
cgccctgaattctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttg
taaca
>MER41C   internal sequence belongs to the MER4I group; subfamily MER41C.
tgtcagaggcgttcgaaccagagcgactccatcttgaatgagggctaggaaaatgaggctgagmcttgct
gggctgcattcccagraagtcaggcattcctaacctctagatgtttacggttaagggaacagattaataa
tgtttactaaacagacccagacttgggagtgtccagatatcccgatatctkgagaacagaggcattccta
atttckctttaaagataataatattgattcttgcaaaakatagtaattaagcaaagatkrrcaatccttt
gtcacaagcccttgtagcagagcacatctcccccgtaatgttctttggctttgttatcctatatataaac
aagcattgtacctagggtggacgcsttcctcctsttgctttcgggaacgccctgctctgtctatggagta
gccgttctttcactmctttactttcttaataaacttgctttyactttacactgtggaatcaccctgaatt
ctttcttgcatgagatccaagaaccctctcttggcggttggatcaggacccctttcttgtaaca
>MER50   Primate MER50 repetitive element - a consensus.
tgttagagtaggtagctaggcagrcatgagcagggcaggagagggcnccccccacacacaccacgaatgt
cgggtgaccatcaggtgatggtcaggcggttgttaaactgtctctctaaaataataattggtcacagcca
gcgccagggaaargcagtctcctaatagatagaaaacacctgaarctggtgatcagcagcttcccgataa
gatctcaggagttgggcgagtgagctcaagcatgcgcactaagaggcaaaatgrcggagtttaaccggca
tatgaccttcctctaggaacactccaatggtaagggaaraatgcctcaartgagcatgtgcacaactcca
gtaaacacactgtgcatgcggcccytcccaagtgctggcaggccactgcgcacgcggacagcccacccca
aggaaaaatcaagggaggagraacgcaaaccccggaagcatgccgatgtataaaaccccaagtcaaaggt
caaaccgcgcacttggtctctcaagtcgcccgcttggccctcttccaagtgtacttcgcttcctttcgtt
cctgctctaaaactttttaataaacttycactcctgctctaaaacttgcctcggtctctttttctgcctt
atgcccctcagtcgaattctttcttctgaggaggcaagaattgaggttgctgcagacctgtacggattcg
ccgctggtaactcagataccttccaccggtaaca
>MER63A   Primate MER63A repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggarngaaaaaaccctgatttgtagcgt
ttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccaacgtgatgtcactgaat
gsggagttgggaaaagatatacacaatcgactctcgtgagccgatacgagccagctccagcacaccactg
g
>MER63B   Primate MER63B repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaaagaaaaaagccctgatttgtagcg
tttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccaacgtgatgtcactgaa
tgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagatacaatagac
gtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatgagttttgagt
atttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttctttgttttt
aatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccgatacgagcc
agctccagcacaccactgg
>MER63C   MER63C repetitive element - a consensus.
cagtggtgtgctggtaaatgtttaacaactggctctctgggggaaaaaatgtatgtatgtatatacatat
ataagtttattataaattttactgatataaaggatgtgtagcacacaatttacaaataataataaaatat
acaatactctttattgtaaattccatatagccagttgattctcacagaatgcttttnttgaattttgccg
aactcctncatctatagccaacctatggttgcaattgacgaacaagtgtagttccaacatgaatgttggt
tgatattttcgtttacattaatgagtaagacgaaagtgaaacaacgaagacgtatgttggaacttcactc
attcgtcaatgatgtgagtgacttctttgctgaatcggataatagttttcaaatactggaagaatatttc
ctcaattttttgtgctattcacaatgtaacggctacagacacgacacacttttaagtttaatctgcatta
ttaacattttctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctgatttgta
gcgtttgccaatttccgtggtgtaaatactcccaccatggccgatttcaagctaccaacgtgacgtcact
gaacgcggagttgggaagagatgcgcagtagcacaccattatatagtatttccaccatacagatacaata
gacgtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatgagttttg
agtatttattacctttgtttttaatataatttatttaattgtaagtttatataatttaatttttaataat
ggctgtgtttaacaaccggctcgcaaaattcctgaaaatttaacaatcggctctcgcgagccggtatgag
ccggctccagcacaccactg
>MER65A   internal sequence MER65I belongs to the MER4I-group; subfamily MER65A.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER65B   internal sequence MER65I belongs to the MER4I-group; subfamily MER65B.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacaaggacatttgcctgacaactgt
ctcacraacctagctactgcaagagcctactgtaactctaagattacaaatcctacctagcaactgccga
cactcgccaatcagagctcgccagctcttstaagacgctgctagcgccaatgaactttctttcaaaacaa
yttgtgtaaccttctctttccttaataaaaccctaacatttttctttgttctctggacataccgaaggcc
acctggtctgtgtgtatgccccaaattgcaattctgttcttcacatgttattcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER66A   internal sequence belongs to the MER4I-group; subfamily MER66A.
tgagataggaggtgggactcgactccggaggcggggcttgaactccagaccagattgaagactagctgaa
acagggccagggcaaaagcacctctccataagacacacccaccggtgccawgtgagtttaccattgccat
ggtaacagccagaagttactgcccctttccatggcaatgacccggaagttaccaccccttttctagaaat
ttctgaataacctgctccttaatttgcatgtagttaaaagtgggtataaatatgactgcagaactgcctc
tgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctctgctgctg
ctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctttcctgggc
gaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER66B   internal sequence belongs to the MER4I-group; subfamily MER66B.
tgaggtaggaggtgggactcgactccggaggcggggcttgaacaccagaccaaattgaagactagctgaa
acagggccagggcaaaagcagctttccataagacccacccaccggtgccawgtgagtttaccattgccat
ggcaacagccagaagttactgcccctttccatggcaatgacccgatgacccaaaagttaccacccctttt
ctagaaatttctgcataaaccgccccttaatttgcatgtagttaaaagtgggtataaatatgactgcaga
actgcctctgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctc
tgctgctgctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctt
tcctgggcgaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER67A   internal sequence belongs to the MER4I-group; subfamily MER67A.
tgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcctcaa
cctcggcctataaagacttgaacaaacactaacatagtttctaatagctcaaggccacatccctaggatg
accctagcccccccttaaagtgcctgcctgagaaaactcaaggctgccaaaataatttactgtttgttcc
agccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaacttcgataag
cgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcacttccc
tgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcacc
tctgcacaaatcgaagctgagctcagttcacgctggactcttttccctactgcaatagtatattactgat
taaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67B   internal sequence belongs to the MER4I-group; subfamily MER67B.
tgagaactgcagaactctcggcacagaacaactccatccaaacccctgcactaagagacttgaccaaact
ctagcatggcttctagcagcataaggccgcgtccctaggatgaccccagcccccccttaaagtgcctgcc
tgagaaagctcaacgctgccaggagaatttactgtttgttctagccaacacctgatgataggcccctgat
ctccctttcttagagcatttactaaaaagggcttacaattgtgaatccttcctctgtccctttgagatat
gtatgtatctcctacaactcaggagtgtctttctcaaggacctgagagccattcctttgaaatgtaatca
tcgagaaggatagggcctctgtctcccagtctctgtgggaggatagaatcctaactttgataancgccag
ctagcagacacagctggcctaatcacattgacactgaccagccctttgtaatttttcacttccctgactc
tgctgagcccccacgtnccctctccccnctccctcattctccctttaaaacgcccagtcacctctgcaca
aattggaatggarctcagctctttcccctactgccagtagttactgaataaaatccgttttcaccgcttt
aactagtgtccggctttgtttatctttgaca
>MER67C   internal sequence belongs to the MER4I-group; subfamily MER67C.
tgtaagggcaaatacaaattaaaaataagaggcttnaattctccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgaa
atgtatgtaaatctttttaaaagctaaataagcctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaawcatcaaggaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaacttcagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
atgagaagtttatttttcctttggataaagccaattagctaacacagatggccaccccaattaccaggtg
aatttaggatgaactatgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtstt
tgcaatctcttagcagattgcctgtgatgcgcatcacattctggtttaatgcttattcaataataaaacg
tgttttctttctcttctacctttgtggagaggttttctgggttgggagragattttgtttttaattatat
ttccccaaca
>MER68A   MER68 LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcatctgggaacttggatttcgggagggttcccaccattcccwkaactgataagagtggct
cactgtgcctaaactgtttgtgcaaacaatatggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacgtgctaggcagagggtgcctacgtgaccagcccccartaaaaaccctgggcactgagt
ctctaatgagcttccctggtagacaacatttcacatgtgttgtcacaactcgttgctgggggaattaagc
gtgtcctgtgtgactccactgggagaggactcttggaagcttgcgcctggtttcctccggacttcgcccc
atgcgccttttccctttgctgattttgctttgtatcctttcgctgtaataaatcatagccgtgagtatga
ctatatgctgagtcctgtgagtcctcctagcgaatcaccgaacctgggggtggtcttgggaacccctaac
aca
>MER68B   Primate MER68B LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcgtctgggaacttggcttttgagagggtccccaccgttcccttaactgataagagtggct
cactgtgcctagactgtttgtgcaaacaatgtggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacatgctaggcagagkgtgcctacgtgaccagcccccaataaaaaccttgggcgctgagt
ctctaatgggcttccctggcagaaacattgcacacacgttgctgcattttattgctgagggaagtaagtg
ygttctgtgtgacycctctgggagaggacmywkggaagcctgcgcatggattcctccagactccgcctga
tgtgtcttttccctttgctgatcttgccgtgtatccttacnrtgtcgctgtaataaatcttagccatgag
tataactgtatgctgagtcccgtgagtccttctagcgaatcaccgaacgtgggggtggtcttgggaaccc
ctaacaca
>MER69A   MER69A repetitive element - a consensus.
cagaggcggatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgta
taagcttcaggccccacaaaacctggatctgcccctg
>MER69B   Non-autonomous hAT-like DNA transposon - a consensus.
cagaggcggatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccgcaatcggttaagaccgctgtctctttccactccgacttcccctccgtcacacttcccc
tcgtgtcgggtggcgttggagtggccgtgggcatttttgggatccggctaaggggaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtgtaggaatggcttccaggaatactcctactgcccactgtgccgactcacccggc
gtcgtgacacgaaggtgcagggccagaggtcgtatcgcgatatgaacgtgtcctacggcacccggcaccg
gaagtatgtgggtagtggaggagaaacaaggtttgaaatgtatggagccagaagctagtctgtggaaaat
tcttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgatgcctagtcaaaacgg
aagttctctcctgtcaggaatatactcgataatgcagcgtatacaattataaatgcaccatacatttttt
tttcatttttgatgggaatcgcgcgaaatagaatttatcagaattcctgtgtttgtagggcacaaacctg
tagcagtactacaaacagcgagtacgtctgtgtgtgaagtcgcatgttttatgcatcccaactatcaata
ataaaaaacaaattttgatcaaccatgctagaggaaagactgaattatctttctattctctctatagaaa
atgatattacaaaatcattgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaaa
agtattatagaggtgtgtcaggcagttaattaataaaaatattatgttatttttctggattttgtgatgt
ttgtggtatttgtcagctttttaaaatttgtaatttgttgtgatttnttttctcattctaaataaatatt
cacttttgtacctaattttgtatttgtaattttgtattctttttcttaaagagggccccccaaattgtat
aagcttcaggccccacaaaacctggatctgcccctg
>MER70A   Primate MER70A putative LTR - a consensus.
tgcaggacagttctccgggtggccttggaccgacccagttctccccnctttctcgcttgtagttctcaag
aataactgtagaatgtgctgggaatgcaacatcctgagatagggaggaactggccggaacagcccgggct
ctgttccagtccctcctagaaacaggatgtccttcaacgctttagcccagcgagtcatgtngcccctgag
gtataaaacccagggcgggctgctttccggggtccctcagctgcggtgcaagtggggcacgcgcagncga
gactccatccgccctgggcagctttcctgagccttgggggaccggctcgcnatgaatcctaggcttctgt
tgtcccttgctgcctatctgtaagtaataaacccgcttcatgtaacttgttgcgtgtgtgngtgttctgt
ctcaccggactcagacaagttggtaaccagtgcacagtgaacctgcttcaca
>MER70B   Primate MER70B repetitive element - a consensus.
tgcaggacagttctccgggtggccttggaccgacccagttctccccnctttctcgcttgtagttctcaag
aataactgtagaatgtgctgggaatgcaacatcctgagatagggaggaactggccggaacagcccgggct
ctgttccagtccctcctagaaacaggatgtccttcaacgctttagcccagcgagtcatgtngcccctgag
gtataaaacccagggcgggctgctttccggggtccctcagctgcggtgcaagtggggcacgcgcagncga
gactccatccgccctgggcagctttcctgagccttgggggaccggctcgcnatgaatcctaggcttctgt
tgtcccttgctgcctatctgtaagtaataaacccgcttcatgtaacttgttggtgtgtgngtgttctgtc
tcaccggactcagacaagtagtaaaantgcagcccaagatgcagtgggctgaagtgtttcngacccctat
tcctggtggttggcatagtgatgatctttgctattctccacgcagtgggagtcctcccttgggattggta
attagtgaacctgcttca
>MER72   MER4I-group.
tgagaaataaaaataaaatcctaagccccccaactgactgaacagaccmcctcttggccaaggggacccc
agagaaaccttgaaagctgagttcctggccatgatgggatgggagggtcagacatgcctcgttatacccc
ccccttactaaccaccattaggctttcttccctaagggctaaacagaaaccagccctttcaaaagactcc
accactgatatcaaccaaccacctgatgctgcccctcccttttgcggtttcaacacaacaactgaccagc
aatgcattncnttcctgataagagaccaccgaccacggagtggttctggccagtctacagaggatgtaca
gtgagggttttcgtgtcctctgcttcaccttttgacatcagagggccaaaaactccaccctyggatcatg
ctaatgctgccagtttttttgwacatgggacccatgaagrggcatgaagctcaattgcacatgtgcatgt
ttctcctttcataaatattcatgactcctcctatagcttattgaatatgtatatttggccaccctgctca
gcataaattyctgttccctttttccctccctcgaagtgcctgtttctggcttctggccagaggctaygct
tcccagcctgtcagaatggccaccctgcaggctgcaaccctttatgagaaataaagctctcctttccaaa
tttatgaacctygtcattcttcagttgaca
>MER73   Long terminal repeat of retrovirus-like element - a consensus.
tgttgtgatttttattgttatggtttctttctaatttggtcttgaggtctctctcttgagagtggccata
agccaagatagccactctctaggagagccctgactggggggaaagttaggttcaggtgtgtgtgtcaggt
gagacacaatgaggaggtgaaaccaaaatgcatgaaacagaagaaatttattactcacaggtcccagaga
ggttaggggtgccgacgggaggccgacgggaagtctggaggcggcagggagctcaaccagtgggtgggga
gcaagagagaggggagagagcctgtgggactatgcctttattaaggtccatgggcattatcccttaggct
ttcccacgggggttgtggattggctagtttaaagaaaacacgcgcgaaggggggaacttatttacatgac
tctggtgttgaccattaggttttatcgtggtcagcagctgtgggatgtgttgggttttgggtcagtgaga
tgaggaacaagcgggctatatcgcaaacaaccacacggggaggggaagttttaactaggccaaaggtgac
ggggtacgactgggtttcaaacaacttatgtcaggcctaaaaatggatgccgaggcagcaactatattaa
acaaatttatgaca
>MER74   Putative long terminal repeat of endogenous retrovirus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER75   Primate MER75 repetitive element - a consensus.
cccttttcccgtttgccccgagaatactcgccggcggcgcttgcggctgcagcgtttaccccgagataac
tttgccatgaaatatnttgcttttattattattttcgcatcgttctagtatatcgactttggaaacaaaa
gacatcgttctatttatagcattctgtttttagtagtggtatttccatttacaaaatatagtaattctcg
attgctgaaaatgtcaaatcctagaaaacgtagcattcctacacgtgatgttaacatcgttctcgaacag
ttgttggccgaagattcatttgatgaatccgatttttccgaaatagacgattctggtgattcagatgatt
ctgatgttagttctgtttagaaataactccaagaacagtttttatattttattttcacattgaaaatcag
tcagatttgcttcagcctcaaagagcgtgtttatgtaaaattaaatgagcgctggcagcgagctgcactt
ttttttttctaaacgggaaaaggg
>MER76   Primate MER76 repetitive element - a consensus.
tgaggagtccagctcctggcyaaaaacctacgtgtgatttttcaggcctgaccataggcaattacaaagg
ctttacctggcaggcctcatgggggaaagctgccctccccacaccagacttggtgcacagccagtgcatt
gcagtctctgaagggagttgcagtcaaggactcaggcccccctggccggccacgctcttacacatatctg
cattcctagcccaggcgcctccgttcggaggcctctttattcggggccttctgcagaggtcttcctcagg
cgcctctgccgagacctctttatgaggggtggaagcgggagccttgaagacatttntctccactctgact
cagtactcagtgcttttccactcctatcccttccctntcctcncctccatgacccacgggtccataaaac
tgcaggagccttttgttcagggctccctcaacagtgagatgacccccatgtctgtgccgatccacctgac
ccttgaccggtgccatttccatgnggaaaaatggaacatggggagtcggtactttctctggttttagcct
cttgcttatactatcgaagkaagtgattaaagatttgactgttactttcattttggcttgttgccttaat
cggctnctctgacacccggcagctcagctctctctccagctcagctgagctcctgaca
>MER77   Long terminal repeat of retrovirus-like element - a consensus.
tgtgcagtaaagggttaactcagcaggcctgggttgtccaaaccctgcacattccaaagaaaganctggc
ccttgaccggctcctgggagataacctctaagcccttggaatatcctgcctgataagagtgtctttgtnt
acctggrgccttgggccacgcnagatagtttatgctaacaatgtgatttatggtgggggccttgggccac
gctgtatcagtttgacctctggaggggctggagactgagtagctaaggtcagccacgcgggcgctccatg
cctacatgaccgacccccaataaaaaccctggacaccaaggctcgggtgagcttccctggttggcaatac
tctntgcatgttgtcacacatcgttgctgggagaattaagcgctgtctgtangactccactgggagagga
caactggaagcttgtgcctggtctctcctggactccgccctatgcgccttttccctttgctgattttaat
ctgtatcctttcactgtaataaaccataaccgtgagtataacagcttttctgagttctgtgagtccttct
agcgaatcactgaacctgagggtggtcttggggacccccgacaca
>MER80   MER80 repetitive element - a consensus.
caggggttcttaacctggagtctatggatagaattcagggggtccgtgaacttggatggggaaaaaantt
acatctttattttcactaacctctaactgaaatttagcatttccttcaattatgaatgtaggcaacaaac
cacagtagtattagcagtacctgtgactttgtcaccaatagaaatcacagatattttcatatcacattac
agttgttgcagatatctcaaaatatcatttatgctcatcactacttcgaaattacggtagttattagacc
cgccgctagatcttgttatttaatgcattaataaagaagcacatatattactatatcacaaatttggttt
tttaatattttgataactgtatttcaatataattggtttcctttgtaatcctatgtattttattttatgc
atttaaaaacattattctgagaaggggtccataggcttcaccagactgccaaaggggcccatggcacaaa
aaaggttaagaacccctg
>MER81   MER81 ia a non-autonomous DNA transposon - a consensus.
tagggtgaccaactcgtcctggtttgcccgggactttcccggttttagcactgaaagtcccacgtcctgg
gaaacccctcagtcccgggcaaaccgggacggttggtcacccta
>MER82   MER82 repetitive element - a consensus.
cagttgatcctcattatccacagtagttatgttctataaagtcaccgcgagcactgaattagcgaatact
gaaccatcgctcctagaggaaatacagagttaggttcctgcaagcctctggtcacaacattttcatcaac
cgatcaatatataacyttgttttatgtgtgtttctgtttaaagacnncttatttaatatatattgttgat
ttattaacactgaactcacagccaacagcactataactcatgcctgaatgaagcttatctaacacacata
ttttctccataaggtacatcacagccttcttgtgcttaggaacaccagacagcacttcagcactatgctc
ggggccattttaaacggcgaaatcaccaacaaaaagcacaaaaatgtgaaaaacgtggcactaaatagac
ctcgaaaaggacgcttgtttacggtatgagagctgaaacaagaaggcagagcgtcgccttgttcgacctc
agctgggaacgtgcacgtcgggcgactcgaatttttcgctgctctgcgcatgtntgcaaatgaccgngaa
agtgctncaagtattgattttggggttacaaataaattttagcgagtaggcgaattcgcaaatacggaat
ccgtggataatgaggattgactg
>MLT1G   (MLT1g subfamily) - a consensus.
tgtggcggattttaaaaatggccacaaattctttgacactcttcccatcgaggagtggggtccgtntcct
ctccccttgaatctgggtgggctctgtgactgcttcgaccaatagaatrcggtggaagtgatgctrtgtg
acttctgagsccaggtyataaaarrcattgcagcttcctgcttgctggaackctcacacttggagtcctg
agccaccacgtaagaagttcarctrccccgaggccaccatgctgtgaggaagcccaagctastccacana
gagaaaccgagccatcttgraagcggatcctccagccccagtyaagycttcagatgactgcagcyccggc
tggcgtcttgactgcgccgataccacgtgggacagagawgaactrcccagctaagcccagcccaaattgc
tgacctatagtattgrgaacgaataaatgrttattgttttaagccactaagttttggggtggtttgttac
gcagcartagataactgaaaca
>PABL_A   Long terminal repeat of endogenous retrovirus; subfamily PABL_A.
tgtggcaggccaggtctcactaacacaggcctccataacaactgtttcagcactgactgagtggttaagt
taaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagcccaccaagag
ttttgcctaggcctttcctgggccttgaagcatgacaaaataacgaaggaattcttaacaggacccgttt
aggattaaacaagttttactgggggtctgaagaaactccccaggcctccacaaacaagtttattgggggt
ctgaaggaactccccaaacctccgtgatttagcaggagacaagataagggtaatcaccccagcacctgga
cccatttagattaagtaaatttactgaggctccagaggaaggtcttcaggactcagaccttagttataga
ttagaagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagcttagaaggt
atataagctctggaaaactttgtaattttgagttggtctggtgataatttccaggccttctccctgtaac
cggttacagaaataaaaactctcttcctccccagttcatctgcatctcgttattgggccacgagaaatag
cagcccgaccctcagtttggtccgggaaca
>PABL_B   Long terminal repeat of endogenous retrovirus; subfamily PABL_B.
tgtggcaggccaggtctcactaacagctgaacaggcaggcctccatgacaactgtttcagcactgactga
gtggttaagttaaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagc
ccaccaagagttttgcctaggcctttcctgggccttgaagcatgacaagataacgaaggaattcttaaca
ggacccgtttaggattaaacaagttttattgggggtctgaagaaactccccagacctccacaaacaagtt
ttattgggggtctaaaggaactccccaaacctccatgatttagcaggagacaagataagggtaatcaccc
cggcacctggacccatttagattaagtaaatttactgaggctccagaggaaggtcttacaggactcagac
cttagttatagattagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagc
ttagaaggtatataagctctggaaaactttgtaattttgagttggtctggtgatattttcccggccttct
ccctgtaaccggttacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacga
gaataagcagcccgaccctcggtttggtccgggaaca
>MER57I   MER4I, MER41I and MER65I retroelements.
[encoded data, 7597 characters]
ttttggtcaatctctcaaaattgagaaaatgaccaaaaggggggaat
>MER65I   MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>MER41I   Primate MER41I retroelement; its LTRs are MER41 sequences.
tctttctggcaaccacagaagggactacagtgcagaaaccctcaacccaaaggctaactttgagtaagtg
atagggtcctgtaacatctttctggcaaacccaaaaggacaatactgaagaaacctcccaatgcaaagga
aatagactacatcattgataggccgaccttgggcaagtggtggggtacccaggtaaaagatgggattggg
ttagaggcccaatttagggaagtttgggtctctgctaagacagactgggttaaaggcccctcttaataaa
tggcaaggatgcttgaccaaacttggtttagagggccaacttaggagggttagagtccttcctaagattt
aaggggttagaggcccctctcagtaaagtccctcatggttaagaacgggtttggcactaagggatgttaa
ctgccattctctttggattaatctgtgttgcactctttgctgatggctatgggtgacaggattaggcatg
tgatcctgtgatcacgggacatgaggagctttttcttccctaaaaggggaaacttcagagctgctgggcc
tgctggaaaagatcccttctcaactgacaagtgaccgcctgaacttttgattcagtgtctgctgcaatgg
gcaggtctttctctggtctccctgagcgccttgccttccccaccctgccataagcagtgcttttctccct
tccctttccyctctctstctgtgcaaaccggttaaacraacgataaaaatcactgtttatctcctctgta
aagttttrattaatrgaaaaaaggatttttgaggctagtcttaagctgtagcgaatctggtgtrctttgt
gtgtctttctgtatngttctgtcataaaraggggtaccttaggatagaacgcwggctkaggacmcycgta
agctcactgttcaacccagcccagcaaactggtcagttataaattttgctgcaggtccctgaaacaacaa
caaaaaantggatgaggtttccctcccatcttgttttatgtccttggragcttgaccttgtaaccatgtg
gcgrtrctttcgcttggyctctgccatcacaatggcgtcccgggttcaggrttcwattcctgnctcagrr
gatgagtttctttatattcttctgtctatgtatttatatgtgttgtgtgtrtgtgatgtttatatatraa
agagctntrattaattggcttaaaraataagaagagcttaaatcaaatattttgtcagaaaartaraarg
tstartgccttttagttcacgtgactttagtaatctttgrkaaataaagacagtttaaagattattgrta
aaataaaaatgtcttcaaaayttaatktaracatttggtctraattagrcaggtcagatactatstctac
tagatgytttaaggtcataaactgcttctatgacttttgataatttttyaacttgcytgctttanagcca
ttngattctaggtaaggcctggggacatgtggagttagccacgtcccctagctatgctggagagtcagac
tttatctgcgcttctgcctggtgtgtccaaggctaggctccacacctagtacataattaaaatcacttac
taaccaggtttttcaccaaaagtaaaagttcttaagagttaacattgtaacatgtaattaagactactaa
agaaacagttccacaagtaagtcctataaggaaagtgaaatgtgtttttggttaaaaaaaaattataaga
agtcacgggagtxatgagttttctttactttgcctaaagggttagaggattattttaagttagatagaat
aaagctgaaggtttaagcaagttgtggaaggtttatttaaaaaattaattgtaagagattttgtgtgtga
atatattggctaaagttgaaaaggcattattcagtttttccataaattaaacattggaataaaagcaaaa
caggtttttgttagagcaaaaacctgcttatgacctgctttttaacaaacatttgtaaaggattataaaa
ggtttatgagaatgttaccttatggtcaaacattaaaattgggtagatatgtctataaggttttattaag
aattgggtttgacatcaataatacactaatgcaacagtgacatttggctgatttagtataaaagtcatag
aggaagcatcatcaaatatgaaatggtgtttggctttctttgggctgtatttgtataaatgtgtcattgg
tacatgttccaaaattattttaaaaaaaacttctttaaccctgatatgacttagtgtatgctattaataa
ttgttatgnnnnnntaaattattgcgtgccacagaggtaacaaattttccttgtcaattgtgtctttaac
tgtggctgtcctaagactttttgtcatccatagacaattgttgtcttgttttggtcctctttagaaggtg
gtttataatcagctgtagaactctaacaggtgctcttaaatgcaggtttctgataactttggagattgtg
acattagaacggaggaaaaacattcaggactcatgaagagctgaaatrttcatgaatatcaagcagaaca
gggagttaactgcatggactgaactaanagaagtctaacgtgtaaaacgttgctgatcctttgttttgtt
tttcagagtcaaggaaactttttcttttgagctatttacagcttttagcaattgagtaaagtatactyct
gtgaacaaaatttggagcatrtttgtttctctctacctgatttctccagaatttggaaactattcgtgag
tattctcaatttatggcaatatagttatttgcataagtgcaataagaatctgttytctttagtaacagga
cacaattggagaaattggttattttaccaaggctttgactggaatggcatacttccctttaaggaatcaa
anttgacttrycgagccgataaaagccccttggggaatctgrcctcataccttnttcayacgcagtccct
gtacagggttcctgacctgtggtaagtaaagaatgtcactttctracaggcccagrarccccaagttaty
ttgrgacctcaagaggagaggaatttacycaactcataggtatttgakggtacaaanccatggctgggct
cagctttaaaaaagtcttatccgagattccttctatgaaacaaagttccatcaaagccaattttaaaagc
ctatgtgaaaaataattattcttgctgcactktatacaaataatyaggccaagtataataaarcaaaycg
gtcctaccatgatttgtctttaryaaaaatggraaactggagagagaaaaattatgtttcaaaacctata
gtacacytgttgttarattctartcttrcctaatgtttttcagttkttnttatnttctrcantttagact
aactctacttattcctgtgaaccaaccagtgatctctggctgcwgctcagaagaaacaagrartgatggg
taatataaaaatccggatnntattctaattctgggcacgtattggaatcggctaacaaccccatatcagc
ttggttccaatagttgcccagttcatggaaagccttctaatttagtttacttgggataattttgcttatt
ttgctttactnttgtggaatatattgctgttgtactctttgtgtaggaatgcaggataagcttactraat
gttttcttaaaycgaacccttattcctcttccagggtaccatcttttgttgggaactcagttacaaataa
ccctcaccataccagtactttctggaatgagctcctcttctaccctggagggcaagagaccataatagtc
aggcagaaatatcattgcccctattcagcctgaagaagttacagaagatgaatctttgtccttctacaac
cttaggattaagggttcttttata
>PTR5   Human PTR5 mRNA for repetitive sequence; part of LTR.
tgagaggtggcagtgtgctggcagccctcgcagccctcgctcactcttggctcctcctcggccttggcgc
ccactctggccatgcttaaggagcccttcagcctgccactgcactgtgggaacactggccaaggccagag
ccagctcactcagcttgtggggaagtgtggagggagaggcgcaggcgggaactggggctcgatgcggcgc
ttgcgggccagcgtgagttccggtggttggtggcttggcgggccccagactcggagcggctggcctgccc
tgctggccccaggcagtgaggggcttagcacccaggccagcagctgtggatggtgcgctgagtctcccag
cagtgctggcccaccccaccagcactgcactcgatttctcgccaggccttagctgcctccccgcaggcag
gccttgggacctgcagcccaccatgcctgagtctcccctgctgccgccgtgggctcctgcgtggcccaag
cctccccgacgagcactgccccctgctccccggtgcctggtcccatcgaccccaagggctgaggagtgca
ggtgcatgctgcgggactggcaggcagctccacctgcggccccatgcaggaagccagctgggctcctgag

>L1M2_5   Primate L1M2_5 LINE1 repetitive element - a consensus.
[encoded data, 4251 characters]
>LTR10A   LTR from endogenous retrovirus-like sequence (HERV-I).
tgttaagtacggtgagttctgagatcctctccaaagaaccagtatgtcagtatgttcagctcncctgttc
tttgttctccattttaaagtttaacttcagtatgttcagctcncctgttctttgttctccattttaaagt
ttaactcaacagttctaatcagtagttaacgcctgttcccctggtcacctgctccatcctgactcatccc
gggtcacctgctttgacctgagtcacccttagtcacctgctctgtaaccatccttcccgccaaactactc
accccgccactctggctcatacccctgctctctttaaaatagccaatcggaattagcttagactgtgcgg
tccaaccctagccaataggggaacgacacagcagtaggggctacctgcatcaggaataagaaccccttcc
cctcccttgtccaggtgtgctctcgccattgctccatctgcgagacgcacccttctatagaagtaaaatt
gccttgctgagaaaattaaatttatgtttgagtgctatttcttttgcggcaccgaaacgaaaattaaatt
tatgtttgagtgctatttcttttgcggcaccgaaactttatttataaca
>LTR10B   LTR from endogenous retrovirus HERV-I.
tgttaaatacagtaagaaattcttcttcaaaagtttagcctgcttaagtttccttgtcctttgtttcctg
ctttcaaggccagacttccttactctctgtgtttcccctaccctggtaaacaaccttcctgccagtcctt
acccatacagcccacattccacatctgctacccactctgtgatttacctctcccgtcgcaatagcctctc
ccaccaaaactgatcttcccgccttcccaccagtgcaaccacattcctgcactttgcaagttagccaacc
gggttcggattgtgcagtccaactccagccaatggagtcaggacacagtagcagggacaagctgcgttag
acataaaaacctctgctttcctttgtttagggtgctctcgtggcaaccagacttaccaggagctctattc
tgcaaaagtaaatttgccttgctgagagaccctttgtcctttggctcagtgttggttcttctttgcagca
ccgagcatttgtttccaaca
>LTR10C   Putative LTR from endogenous retrovirus.
tgtaaaaagtaaagtagaggttcctcttcaaagactttcctccccatctaattaggaataaatagtaact
tctcttaaaagcaaaatttattcaaagacctgtgctaacattcttaaatatctgctagccataataaaga
aatcaatgtactttatattcttagctcccacaatttagcctaaatatttgccctggcatgcttatactag
tccaagcaagcattaggtcatagcctgttcctcttccttatttgaaggtgtttttacctttctcagcatt
ccacaagttacttcctccttcctttgttctcctctgcctttgcctcttttaaaaagttctaagttgctag
ccaatcaggacaaatacagaatgtgaggtcctgttccagccaatagaaactggacacagcagtagggtgg
acgcgtcaggttataaatgaccctgtctcctttgttcagtgtactctcatggcaaaactgctggtgagtg
taccctttctgcagaaagtataaawatggccttgctgagaaaattaaatttatgttcaagtgctatttct
ttacagcaccacaagcatttcaaaca
>LTR16A   LTR16A repetitive element - a consensus.
tgtgacggacatgraggtgcgctgcccagatcccccttcaagaacggaartyttattncccyagctgctg
ggagwgctgtcggcagacagccctcagctgtcagccccttcaggaattgcctcngctgaagagagccgcc
tcgcccaaggtcacgccccctccccggggcagcccacatccaatgactgrtcaatrtggaggtataaagg
cccggccctctcgccccaactcgggacaactctgaagggccatyccagctccagagctccccgtggggtc
ggctgaggcctttgttgcgactgcattgcagcccaacttctccctctgcccaatcctgcttccttccctt
cccttccacaggcgttgatcccaagggcgctccctaataaacctcctgcacgctaatctccatctcagag
tctgcttcccggggaacccaacctgcaaca
>LTR17   Long terminal repeat of endogenous retrovirus HERV17 - a consensus.
tgagagacaggactagctggatttcctaggccgactaagaatccctaagcctagctgggaaggtgaccgc
ttccacctttaaacacggggcttgcaacttagctcacacccgaccaatcaggtagtaaagagagctcact
aaaatgctaattaggcaaaaacaggaggtaaagaaatagccaatcatctatcgcctgagagcacagcggg
agggacaatgatcgggatataaacccaggcattcgagccggcaacggctaccctctttgggtcccctccc
tttgtatgggagctctgttttcactctattaaatcttgcaactgcactcttctggtccgtgtttgttacg
gctcgagctgagctttcgctcaccgtccaccactgctgtttgccgccgtcgcagacccgccgctgacttc
catccctccggatccggcagggtgtccgctgtgctcctgatccagcgaggcgcccattgccgctcccgat
cgggctaaaggcttgccattgttcctgcacggctaagtgcctgggttcgtcctaatcgagctgaacacta
gtcactgggttccacggttctcttccgtgacccacggcttctaatagagctataacactcaccgcatggc
ccaagattccattccttggaatccgtgaggccaagaaccccaggtcagagaacacgaggcttgccaccat
cttggaagtggcccgccgccattttggaagcggcccgccaccatcttgggagctctgggagcaaggaacc
cccggtaaca
>MER41D   internal sequence belongs to the MER4I group; subfamily MER41D.
tgttagggaagcaggagcctaggagagccagagtgacaccattttaaaatcaactccatcttaaaactag
caaggcacattccttgccagtcacgacccatggtcctaagatgtttacagttgaggaagcagcttgawaa
tacctacaaggacacactcctacaacaacagaaagtccagatgtcccaatacccataacaatatatgctt
tcaagataattatagtcatgctttgatgtacttacgcactaaaatgtcaaagatagttttctttaaatca
atatamtaataaattttgtcatgctgtcagcccacccgcacgtaggcacagcttagtttagtctttacat
agacaagactcctatataagaaaagtttaagacagagatggcgcgttcctccgcctnctttccggggacg
ccctactctgtaatggagtagtttttaataaacttgctcttctcactgtactccgcaactcgccttgaat
tccttcctgtgcgagatccaagaaccctctcttagggtctggatcgggacccctttttctggtaaca
>MER51A   Long terminal repeat of retrovirus-like element - a consensus.
tgaggcaggagaatagggtctggaggcagggaacctaaggccgattcacgctgacttcctagaactaaat
cgaaaggaaaaccccaactttccacgcccaagtaacaaaaggaccagaggctactccctttgcaaccccc
caccttttctgcgtggcagatgggaaattgaaagtacctctgattggtcccctcccgcaaccaatcagac
tggtcgcgggccaagtcttcatttgcataggagtgtaactttgtaacttcacttcagcctctgattggtc
gctttccgcaaccaatcagacgtttgcataggagtgtaactttgtaacttcacttcagcctctgattggt
cgctttccgcaaccaatcagactgattgcgggccactacttcatttacatagggtgtacaccaagtaacc
aatgggaaacctctagagggtatttaaaccccagaaaattctgtaaccgggcccttgagccgcttgctcg
ggcccgctcccaccctgtggagtgtactttcgttttcaataaatctctgcttttgttgcttcattctttc
cttgctttgtttgtgcgttttgtccaattctttgttcaaaacgccaagaacctggacaccctccaccggt
aaca
>MER51B   Putative LTR of retrovirus-like element - a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacacttcagctatgacaggaaat
atcctctccatagggcataggccgagtaaatgactttgtaactttacttcgtcctcttcatttacatagg
gcgtaccccaagtaaccaatggaatcctctagagggtatttaaactcccaaaaattctgtaatggggctc
ttgagcccctatgctcgggcccgctcccaccctgtggagtgtactttcgttttcaataaatctctgcttt
tgttgcttcattctttccttgctttgtttgtgcgttttgtccaattctttgttcaagacgccaagaacct
ggacaccctccaccggtaaca
>MER57A   MER4I group, MER57A subfamily.
tgttaaattaagtttagcctaaagctgcctccttacatattttaagttcggcctaaaggtttctctgtac
atagtgaactataacctaactggaggtgtaaacagaccgtagcctactcttgtgccaatcactgagtttc
ggccaatcacaggcagccaactgttcaaaccatgttcaaataaggcaaatgccgagctgtaaccaatcca
gctgtttctgtacctcacttccattttctgtacgtcactttcctttttctgtccataaatcttctaccac
atggctgcactggagtctctgaacctactctggttctgggggctgcccgattcgcgaatcgttctttgct
caattaaactcttttaaatttaatttggctgaagtttttcttttaaca
>MER57B   MER4I-group; MER57B subfamily.
tgttaaagcaagctaaatatagcctgagaaggactccgtacttctatatttgagtccttgtggatgaact
gtaacctagcttaataggcagacaaggttgaaaacctaacttaggagtatgcgcctgtaacaatagctga
gtcttggccaatcccagcggccatacttcaaccactcanagactgctaagtgttcaaaccgtgttcaaat
aaggcaaacgccgacctgtaaccaatccagctgtttctgtacctcacttccgatttctgtacttcatttt
cctttttttttatctataaatttgttccgaccacgaggcatccctggagtctctctgaatctgctgtgat
tctgggggctgcccgattcgcgaatcgttcattgctcaattaaactcctttaaatttaattcggctgaag
tttttcttttaaca
>MER65C   internal sequence MER65I belongs to the MER4I-group; subfamily MER65C.
tgtgaaagttgatcatacgaattgggtcattcttgtcatacccaactaaaaccagggccgaggggcccag
ggggaaaaggcactcggggcgcatagcattgctccaaaatataattctctgcaaccctggctgctgaaac
tgcctgttgtaacctgaaaccagttttatctaacagctactgaaacaacctactgtgactctaagactag
ttttacccaccaccgtcactcaccaatcagagcttgccagctccccaaaactttactagtgccaatgaac
tttctttcaaaacaatatgtaacatttctcttttttataaaacctccaaccttctctttgttctttggac
ataccgaagaccacctggtctgtgtgtatgccccaaattgcaattctttcttcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER83   Putative long terminal repeat of endogenous retrovirus.
tgtggagtcctaattagggaaaaggagtcaggctggcgggaccaggggaaagcaaagggagaaagcaaat
aagctataagtctgcctttcttcatggtccaggacacatagccctcctgcgcaaataactcacaatcttc
ctgcgcccaactattatcaaacacctcagctgacagaaaaatgcaagttagctcmctgcaaccttggcat
tatcagtactgcacgcagcmctctgcagcccaagaaccatcctataaaatctccagcaagcctttgtctc
cttgcagtcagctcctctcttgctggtctgcctgttgcttccttgcaacatattttcatactttctctaa
taaatctgcctttctttacctacaactgtcttggtaaattatttttacctcccgcgccaccggccccaga
tagtcgccgctccccacgrca
>MER84   Putative long terminal repeat of endogenous retrovirus.
tgaggagagcaaagaccacctggtgaccatcaaacaggccatccggaggcaaaactccttatctggggaa
tttagaagtaattagacttccctattatctaaagcaggcatctggttccaggcctctttcccnnaaaaac
ttataagtaactagaatttctatacgtctccggaatgcatgcatgctgaaactcactgtgcaacccttgc
tgacatcaaggcaccaaaatgtctacaaatgtaatcatttaccatgacctacgtggctaatatggtccaa
attacccttaagctcccgctttaaggtccataaatgctcctaaggaaaaatccaccgcggcgcgctcagt
cctctcttgctgaggcgccccgctgcactctkctgcagcgttctttctgtctaataaaactttccttttt
caaacctatactgttgtcggtaaattctttttaccaacccacgagtcgaccacttcccgatgccggggct
ctgacacctcgcctggca
>HERV16   Internal sequence of endogenous retrovirus HERV16.
[encoded data, 5041 characters]
tagatctgtcgagtacaaaggtggac
>HERV17   Internal sequence of endogenous retrovirus HERV17.
[encoded data, 8733 characters]
tgttgagaggggggac
>PMER1   Putative non-autonomous DNA transposon - a consensus.
tagagcagtggttctcaaccttcctaatgccgcggccctttaatacagttcctgtgggtcgcgacccaca
ggttgagaaccgctgctata
>MER54   Primate MER54 repetitive element - a consensus.
tgtagtgaattcttataattttatgttgcctcggcatccattttgaatataagtttaactttctcatacc
agaagcagggctyagtcacccttgacacggtttccagttctccacctcctcccagttcctcaatgtggtc
gacccagatatctgccttatacmaccgcctcctggkgaccacctccctatggaacagctggatacaacct
acttgacttgccccactgacccccacaccccacatggactgtgcaggtatgccacagtgaccacctctca
gtcacagcgtgaccccacggaactcgtgcctgcttgctctaaacccaccaattagaactccccgcgggaa
acctgcttgggtaacgccctggaccccaataaaggctttggtcccacaggtctctctctctctctctcgt
tctccccacccgttggttgagcatgcgtgtcccggacagcttcccccttcccattggccctgcgaggcat
gctgccctcttctctctgggatctgtaagtaataaactgcttctgttatttcatgtgttttgttgtgctg
cctcctctgtgtctcacctgaccgacacacccaaacctaactctcttcctggtcagggctctcctagaga
gtggctatcttggcaggaataaactggacacaggtcagacaagagccacaagggcgtctgccagtgtaaa
caagtttcctgtgagagggacacctggtcacgggtcggacacctaggcattaggccgtccgccaggataa
agaagtatcccgtgaaagatacactgtaaacacccacaaccamcttccctggagccccatcagggcaggg
ctagagtttatagccactctccagagagagacctcaagaccaaattagaggaaaatacaaca
>LTR18A   Long terminal repeat of endogenous retrovirus HERV18 - a consensus.
tgtaaggaaaatggmtgcgctktagtcaggagtaggccgaggcagmcwtccggtncagcatgactcagcg
ggtttggagcgcaggcgcacaaccccgcacattatgtaaccacgccacgtgaggcgcattaggtgatcac
ccacgtgagctcgtgcttggctcggagccactattgtctgtaaaaggtataattaccctgctaacgctgt
acatacggcttgcgcccaggctcactcgcgcccagagagagagtaaagccatgtcgaaactgtctacgat
tcctcgagtgtttttccagctacccgccactcgcccaccgactcccctcggacctcagtttgggctagaa
cctgaca
>LTR18B   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgtaaggtacatggatgtgctttggtcaaggaataggccgaggcggacatccaggcctgcatgactcagc
gagtttggngcgcaggcgcacacctccacttgttatataacctgtttgtgtaagttcatacttggctctg
agccactattgtctgtaaaaggtataactgccctgctgacgctgtgcaggggctcttggggctcagctcg
gctcaacatggcttgacatggtgggcgcgctggcgcccagagaaagagagagagagccagagctgtccgt
cttgcagacggacaggggggagccaggacacagcttggcttgctcgtgcccagagagagaaagagttaag
ctgctgaccctgaaggcaagggagagccggccgcgcagctgtgcgtgggggcggcaggagccgcagagct
ggancaggcagccgagacagaggcggacagtgtgagagagctgctgaagtgtgagaagctgctgatgaga
gagctgctgaataaaaccatatttcacctgcctacggccccccgagtgttctttcagctatctgcccatc
cacccactcccctcggacctcagcatgggctggaacctgaccccgggcctgaca
>LTR19A   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgacagagcaggagcatcgccatcttggacaagcactgccattttaaagttccccttgatcaaaaaccgc
ctaaatccaacccaaagggcatcagcctaatggctaakgtcagcatgaccataaaccacaaatgacatct
ccgaccagaaacattccaaccctaagataaacccctcccyraccagagacatgccagccccgagataacc
tcccctccggccagagagatgtcagccccaasataacctccccttcaaccagagacattccaaccccaca
ataaacttctcccccacacagaaacattccaagcctgtgataaagctctctcaccctaaaacccttaaat
actcttagtctgtaagagagagtgctcctgactgaaatcggccagaagcccctctcaggtttattctcca
aaataaacctgtctttgactgttgagccgcttttcrtgtttctttcctctttctttaactcttaca
>LTR19B   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgacagagcaggagcaccatcatctcggacaaacactgccattttaagttccagctccttttccagccty
atgcatttcaaggaaatcactttycttctaactacaagcagccagaaagagcagacagtaaaatacagat
aagacagctcgggcacagagggaggtggkrggaaagtctcttgggtaactgccaaacttyaccctcatac
aatgggccccagtaaaayagkgggccttaataagcacattcctttyccttcgggtwcactaagatargga
agctaaaagcagactcagggaggcggcggggggtatgcctgcagctgcakraagatrtatgggarcagac
ayacaaytstccctcccagataagcacaacaaagagacacagaagcagtccaagcctctrataaactctc
tcaccctgaatccttaaaaactcttagtctgtaagagagtgtgcctctgacctaactcggccagaagccc
ctctcaggttcgttttctctaaaataaacctgtctttgttgactgkwgagccgcttttcgtgtttctttc
ctctttctttaattcttaca
>LTR20   Long terminal repeat of retrovirus-like element - a consensus.
tggtawtgaaaggagttagccagcttgctttaggcagacagtaagggaaagggtccccagagaacctccg
acccgccccacaagtgtttacaccagatgttttgtgcagataagggaacttgcacagggggcttgcctar
acatkcccacagtgaaaaattttwttcyttaacacatgckcagtaagaaaaataaatcaatatggagtag
ctcagactragggccyacatgcgcactggaaggatggggtggagccaccaggaattcgcaccttatgcaa
atrrggaaccagcctcatcagcttytstataraagcyctkgtattcaactgtgaagtggcaaccwgmaac
ctgctttcaggacccctctcttttgctgagagcttttctcttcctttcgcttaataaattctgctcyacc
tcacccttcaatgtgtctgcatgcctaattcttcctggtcatgagacaagaacctggatytagctgagct
aaggagcaaaaaccctgcatca
>LTR16C   Primate LTR16C repetitive element - a consensus.
tgtagcagacgctgtcggtgtcctggctcatcaccccctcagccctcaacatttcnatgtacactggccc
gacttccaactgccagcacctgcanctctctgcctgagggctttctctggccgcgggagcccgctctgcc
cgcgcgcagggcaggccggaagtgccggggaattaatgcccctnggaagcagccctcaaccaatgacnga
tgggagttggtgtataaataccccagctccctcgcccctcgggtgggataactctgaggcatgtgttcta
cactgtctcccagagttccccagcgggattgagctccagttgcccacagtggtaactngcttgataacgc
accctttattggcttccttcccttccctgtctcacttccccactcccctaccagtgtttcctgggatcac
ctcccaaataaactacttgcactcgaatccttgtctcagggtctgcttctgggggaacccaaactaagac
a
>LTR21A   Long terminal repeat of endogenous retrovirus - a consensus.
tgttagggacaaactgcccccaagaaagcttcttggtgctgcccacccctccccgcaaacctctccgcgc
tgcccacccttcccccaagcctytttacatttctaagcccttatctaggcaccacggtgaagccagcctg
atagaagacttyacytatcagrccttgctgcaataaagcaaaccccaattacaaaccatccggaccgcac
agggggaggtcgtgggaarcataaacaaactttacctacaccctccngtaccgtaaacgtcacaaggtga
tatgtggcaraattaaccagcaaacaaccccgggatgcrgccataccaaagractccctcaaactccctk
ccccaatrtaaacccctcattctgtaagcttggggctgcttyccttgactgtkawgggggcagccgrcag
gttaataaargcttgcctgaacttggggctctctctctytggtcctttctctcggctraccttacattct
cactctctaagttca
>LTR21B   Long terminal repeat of endogenous retrovirus HERVH22 - a consensus.
tgttagggtcrcccyraycagacyrytcccttcccctcccacaggmcttacaatayrgtccyttgyrctc
tccgcacagctaccccagggcaaaaracaaaycccccttcactgayccytccagtaactgtscrgacagt
tacaggatgcggtyaacatrtctgttcacctcgcataacaaagctggcaaaaaaacatctccaggatgcr
gacaagwcacytgcacccyygactcactcagctccccsacccyracccagttctcctgcacccccaactc
agctcccgcaccccgacctrgttctggccctataaaarcctgctatwgtctgtaagyrggkctgcctcct
yyaactgtggtrgagcagccaagcagctcaataaagcttgcttgcctgactttgggtctcytcatccttt
ctctcggctgaccttaca
>MER85   MER85 repetitive element - a consensus; MITE.
cccatttatgcctgaggttgcaattttttgaatttttgcatgagtgaaaaatcagaccttggcgatgacc
ttgagcagtaggatataaataactcccacatgcttagcgttccaataatggaacactaggcataaatggg

>LTR22   Long terminal repeat of endogenous retrovirus - a consensus.
tgtdgggrttcastcaggvtggtggsagaaatattaaagggaaatattagggaaagttataggaaatagh
cacaaaccttcttggaaggcctgaragtttgcawaacttcrgtaatagathtggctgaaggcagccartt
cccttaccttwragcattarakcatagggtaaatacwaaggaawatagaggcttccccagttaagtctgt
ttaycctacytccattaactagcttgttkastcakgtggtcctmttggggmaggtcgaccagggatattg
ccccstaatggtatttacttyagaccwgggtgcctragctttaatcattactwgggstactctcttaacm
atgtyaattacccwcwagtgtgttgactcaaagcctttgtyawtwaatctatactraataaatgcctgsa
gtgcyagctgnttagggccagcwgcwgtkacaaacctyycttggwgtstgtaagcggcctggacactcag
ctggactggcaaagcagaatatctgtgtgtcagtgtacrttttattcatccgtcatttgggtcagggtct
gcgggtgacagacccccaca
>LTR23   Long terminal repeat of endogenous retrovirus - a consensus.
tgagaaaagaaaaaatagctyagagcagtctgagctatgtgaggtatgcaaaatttatcaggcccagaga
gacatgagtatgggacttcagtcatgtccctactccccctcrccatgcccgggggcaattgtttgaaggc
attttgttcctgactagctgcctcatccattatcttcatgttcctggaatttgtgatacaaagaacaatg
tatagccaatcaatagcywatgttattttaatgtaaattyytggtaaacaacttaaggaactscctcttc
tttttttcctttaaaaaccacttgtaactgctgctaattggagtgtatattcagggcaacttgaatctat
gctcccaggttgcagtcctcaagcttggcccaaataaactctctacttatattaattttgcctcagcttt
ttccttttaggttgaca
>LTR24   Long terminal repeat of endogenous retrovirus - a consensus.
tgtraaattaaataattcaaacttaaagctgttggaacttkaaattattctgagccttgagaggaatgtg
gctatgcggcctgagtcatgtagcatgcagctgcaacttctgcttytctgatttagattancttttttcc
ttattcctgtactgtaaatrattaggaagaccaaatggcgccagagataagaccccctcagatcactacc
ccttctcacagaatgataaagyaatcttccttggaatgtagcaakctgtaaccaatcaaatcgctgtaac
atatgcactggycttgtatggaaaatgttgtaatcctgctaaaatttctctgtctctgcctatataagtg
aaaccttaacttctccactttggaacgctgaccccattcctttggagtctgtgtttcctgggtggccatc
ctcaagctttgcgctcgaataaactctatacttaatcatattttctgaatctcattatttaaggttgaca

>HERV23   Primate HERV23 endogenous retrovirus.
[encoded data, 4899 characters]
gaaaaggggggaa
>HERV18   Endogenous retrovirus HERV18, internal part - a consensus.
[encoded data, 6106 characters]
cactaggaggactccctcggcctagggggtgga
>MER87   Long terminal repeat.
tgtaacagtggagggagacctagcatgactgactccatcttgcctctgacccccwgsggtawcatccttt
aggctaaaagcttctgcttaktcctgcacgtaggccaagctaactatgggaggaatttagtttatagttc
aactttaaaaaagatggtaacagtccctttcccaaactaacccccgaggagataaggaaagtatacacac
aaataacaatgttatgttaaagatttataggaacattgtgacctgacctaggacaaagaagttttgmcaa
ctcctcggactcttgctggcgcccagatgtctgtggtcatcggtcacctcctaaccccaataccccnctt
sttccccttcccctagcataaaaagaagcctaagattyatgctnatttgagatggttctttaggacgcta
gtctgccatcttctcggtttgctggctctccgaataaagtcactttccttgccacaacacctcgtctctt
gacttactggctgtcgwgcggtgagcagtaccagctttggattcagttaca
>MER74A   MER74 repetitive element - a consensus.
tgtattaaccatgttttttattttctgtattcttgatgctttgacatctggggccttgctgaccctggag
ggactgcccctcccagggctagccaattcctagagatagcaaacgactcgcctgggagcgcgcctttcat
atgcaaaccaaccaatccagagcccacacccccaaccacctcctttatcgggctctcacactctgggcca
ctatccccctgccctaatcaccccagggccaggtaccagacaactagggacagcccctataccccagagc
ccgctgaaattattcaaactagccaatcctaagcctgcttaccctgccttgcccattccttcccatggaa
accacaataaaggctcttgcccacgttttcccgtcgctccctctgcctcctgaccgaccctggtgcttcc
ccgtgtggccccccgtggcgtggcgtgcccccttctcttgggawctgtgagtaacaaactatcttttcaa
tggcagtcgtctcctgatctgttggccttaccatacctgaataataataaaacctacattttaaaaca
>MER74B   Primate MER74 repetitive element - a consensus.
tgttttcttagattctgtattcgtctatttggcatccgttcatcacagagncanttatattaaccatgtt
ttttattttctgtattcttgatgctttgacatcttggggccttgctgaccccggagagactgcccctccc
agggctagccaattcctagagatagcaaaggactcgcctgggagcgcgcctttcatatgcaaaccaacca
atccaaagcccatacccccaaccacctcctttatcgggctctcacactccaggccaatattccccctgcc
ctaaatcaccccagggccaggtaccaggcaactagagaccacccctgtaccccagagcccgccagaatta
ttcaaactagccaatcctaagcctgcttaccctgccttgcccgttccttcccgtggaaaccmcaataaag
gctctggcccacgttttcccgtcgctccttctgcctcctgaccgaccctggtgcttccccgtggggctct
gcgtggcgtggcgtgcccccttctcttgggaactgtgagaataacaaactatcttttcaatggcagtcgt
ctcctgatctgttggccttaccatacctsaataaaataaaatcccaggtacattttaaaaca
>MER88   Primate MER88  repetitive element - a consensus
tgtgttgtaaatgggggagtaagtcccccttgtggggtctttaaggatcactccaacatggccgtggaaa
ttatactcggagaggcacatgaaattaaaggatttattatactcacaggtcctagagagggaggcacggc
acgccacgcagggggccacatgggaggagcncccagggagcgggctcaaccaagcaggtggggggccgag
agagagagaacccncgggcaagtgcctttactgggggtcagggtggagnacacaagcaaaaggcgtgagg
ggatttcactggtgcgtttgaatgtcactaggtcacagtcaggggaaggcaagaaggggaacttgtggca
gggaccagccttatcacactggtgcacctggtcacctgggcggggtgctcacagcctgtttgtggggatg
ttgaggcatcaggaaaatatgaagttttaaaaatttacaataca
>MER54B   Primate MER54 repeat subfamily - a consensus.
tgttttgagagcccccagctaaattggggttccagtaccagagcggctagcaaccctgccctaacgggaa
atgaaggggagctggacgtgggtgtttacagtgtgcctttcacgggatacttcttttacctggcggacgg
cctaatgcctagttgtccgacccgtgaccagggggtccctcacacgggaaacttgtttatactggcagat
gcccttgtggctcttgtctgacccgtgtccagtttatgcctgcctgaccatcgctctggcgctgggagcc
cgaccttgtgttctccccggcgtcccggggaaaacccggcctggggcagcccctggttcttcagatggaa
ggcgcaaattcaatacaccaccacaataggaaacaagttcaaagatttttacttacagatcctgggcagg
gagggcgcaatgagtcgggagggcagtcctccgtccccgggtcacgcgaggcaggaatgaagagtcaggc
agagagaggacatggcaactagcagtatatataagggaatagggtgtgggtcactttaagttcgcgggca
aatgcctgaatggtccntttaaaggaagcggcgggaaagcggggagcccagtctgctaggcgggagagat
gcctctaagttcttatctctggccaccggcttgagccatttgggtgtggtgtagaactggaaactgtgtc
aagggtgactgagccctgcttctggtatgagaaagttaaacctgtattcaaaatggatgccgaggcaaca
taaaattataagaattcactaca
>MER31A   a consensus.
tgacaaagattctctgcttgaccaaactttagtcaggctcctgaaccttctcctaggcccatctgtgcac
ttccttgtaaaatccagttttagcaaagaaccctgctaagtcagtttagcmagaaccccccacccttgat
atctgatcaccctcaatatctgatcgggttcctcatcctccaccatcccccaggtgatgtctgatcaccc
tggcctgtcttcagcaagaatcctgttaggtcggtttagccagaatccccctacccctgatgtttcctct
tagtaattttccatccactgacccctcaccctgctccttggctataaattcccacttgcccatgctgtat
tcggagttgagcccaatctctctcccccactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtcttccttaccatgctttaacaagtatcattgaataattttttctttaaca
>MER31B   a consensus.
tgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaggcctcgn
ccttgggccctgtccttggcctgcwtagcccagttttagcaagaatcctgctaagtcagtttagcgagaa
tcccccacccttgatatctgatcaaattcctcatcctccaccatcccccaggtgatgtctgatcaccttg
gcctgccttcagcaagaatcctgttaggtcggtttagcaagaatccccctacccttgatgtctcctctta
gtaattttccatccactgacccctcactctgctccttggctataaatccccacttgtccttgctgtattc
ggagttgagcccaatctctctcccctattgcagtggtctttncacctattgcaatagtcctgaataaagt
ctgccttaccattttaacwagtgtctgaataattttttctttaaca
>MER67D   Primate MER67D repetitive element - a consensus.
tgaccaagacagccttaacgttcccctcagcttgactraactttagacaggtttcttcctgactataggc
ccctgacctcccttttcttagagcatttactttagaaaacttgcaattgtaaattctttctctgcccctt
tgagatgtaaatcttctacaacccaggaatgtctttctcaaggacctgggagccatccctttgaaatata
atcawggaaggacatagggtccctgtctcccagtctctgtggaagggtaggagcctaactttgataagna
gcaattwgcaaacacagatggcctaatcacattgaccaacctccccaccaacgtcctccagtacttttcc
actagctcaccccagcgcttaaaaatccacctgccttttgtttcagnggagttgagttcaanctctaacc
cctattncaatagtctctgtcctttattgcaatagtcttgaatgaagtcttccttgcctgtttaacannt
ttccggtgcaatttttcttttaca
>MER31I   MER31I repetitive element - a consensus.
[encoded data, 4970 characters]
raacaagaggagggactgacaaagattctctgcttg
>CHARLIE1   Autonomous DNA transposon.
cagcggttctcaaagtgtggtccgnggacccctgggggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgacatcatcgctctgatggctaatggaatgtgtgctt
gtgtattcttgtgttttctaaaattttctaaggtagtaggtttagggtataaatacgtgcgttttcagag
attaactcagtttnttctcagtacttctaccgtgctcttactagctatcttcggttatacctgctataat
ctctgtaacctcattatcgtccaataaatcgttattttgaaatcctgaagttttccttgtgcctatgtgg
aaacacaagaagtaagtacactttgttgtcttgttttgcaataatattttaaanattttccaaatgttta
aattttatctaaaactactattttagaatttaataatatttattctaaaataaaattttatttataatgt
ttttcttatatttaaggatggatngttggctttaaaaagggagattagaagactcgctttctcaacccac
agctgcancgtctacgtctaaagatgctgaaatgnacgaaactgacatatcagcaagttctctggctcat
ggaagggaggaatctactccaaagaaactgggcaaaactgtaaataaaaaacaaaaatatgatgaaagct
atcttttcctcagctttatagatgttaataatttaccttattgtgtcttatgcaacagaacgttttcgaa
tagtattatggtgccagttaagttgcggcatcattttgagaccaatcattcagagtttaaagaaaaagga
attaaatattttaaacgtagatgtnatgagctctttaaaagccaaaaattgtttsttncagcttttcaaa
ctagaaatgaaaaagccactgaagcatcttacaggataagttgccgcattgcactggctggagaagcmca
cacagtaactgagagackaataaagccttgwacagttgacattgctgaatgcctgctggatgaaaagtca
gtaaaagaaatcatggcantgccgctttccaatgatacaanaactcgtcaaattaaagatttagctgcaa
acatgaagaccgagttaatatctcatctgcagaattgtacttttgccttacaaatggacaaatctacaga
tgtggctgganttgctgttttgcttncattcgtccggtatcagcaccaactgatcatcaaagaanatctt
ttatgtgaatgcttggcagcaaacacaagtggtgctgaaatattcaaagtgttgaatggcttttttgaat
cccatggtttatcctggaacaactgtgttgacatttgcactgatggtgcaaaagcaatggtgggtaaaac
tgctggcgccttagcacgaatcaaggcagtggcaccaaactgtactagtagtcattgtattcttcaccgc
cacgcactcgcagtnaaaaaaaagccagtttcacttaagaatgtccttgatgaagcagtaaaaattatta
attttattaaatctcgacccttgagtacacgtctttttaatattctgtgtgacgaaatgggaagtacgca
taaagcacttctgctgcataccgaagtacgatggttgtctcgaggaaaagcacttgtgcgattgtttgag
ttgcgagctgaactagccgcttttttcatggaacaccatttttacttgaaagaacgactgacagacaaac
tatggttattcagacttgggtatttggcagacattttctcgaaaatgaacgaagtgagcctgtcacttca
aggaaaacaactgacagtatttgttgccaatgataaaattcgagctttcaagcgaaaattagaattttgg
aaaacttgtatccgccaccgtgagcttgacagcttcccaatacttaaagacttttctgatgagatcggtg
gtgatattaacgaatgtgattttttgatattgtataatgaaatgtgtcaacatttggaagatctgcataa
ctcagtgaaccaatattttccaaatgaccaatgcatgatgttacaaaatcatgcatgggtaaaagatcca
ttcaaagtgcaagatagaccaatggattttaatgtaacagagtatgaaaagttcattgatatggtttcag
attccacattgcaactaacctttaagaaactaccacttgtcgagttttggtgtagtatcaaagaagaata
tccacaattatctgaaaaggctattaaaatactcctcccttttccaactacatatctgtgtgaggccgga
ttttcttcatatacttcaaccaaaacaacatatcgcaacagattgaatgcagaagcagatatgagaatcc
agctgtcttctattaagccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcacta
aatttttttgttttggaaaatatagttatttttcataaaaatatgttatttatgttaacatgtaatgggt
ttattattatttttaaatgaattaataaatattttaaaaatttctcagttttaatttctaatacggtaaa
tatcgatagatataacccacataaacaaaagctctttggggtcctcaataatttttaagagtgtaaaggg
gtcctgagaccaaaaagtttgagaaccgctg
>CHARLIE1A   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactgtgttgacatttgcactgatgg
tgcaaaagcaatggtgggtaaaactgctggcgccttagcacggatcaaggcagtggcaccaaactgtact
agtagtcattgtattcttcaccgccacgcgctcgcagtnaaaaaaatgccagtttcacttaagaatgtcc
ttgatgaagcagtaaaaatkattaattttattaaatctcgacccttgagyacacgtctttttaatattct
gtgtgacaaaatgggaagtacgcataaagcacttctgctgcataccgaagtacgatggytgtctcgagga
aaagcacttgtgcgattgtttgagttgcgagctgaactagctacttttttcatggaacaccatttttact
tgaaagaacgactgacagacaaactrtggttattcagacttgggtatttggcagacattttctcaaaaat
gaacgaagtgagcctgtcacttcaaggaaaacaactgacggtatttgttgccaatgataaaattcgagct
ttcaagcgaaaattagaattttggaaaacttgtatctgccaccgtgagcttgacagcttcccaatactta
aagacttttctgatgagatcggtggtgatattaacgaatgtgattttttgatattgtataatgaaatgtg
tcaacatttggaagatctgcataactcagtgaaccartattttccaaatgaccaatgcatgatgttacaa
aatcatgcatgggtaaaagatccattcaaagcgcaagatagaccaatggattttaatgtaacagagtacg
aaaagttcattgatacggtttcagattccacaccgcaactaacctttaagaaactaccacttgttgagtt
ttggtgtagtatcaaagaagaatatccacaattatctgaaaaggctattaaaatactcctctcttttcca
actacatatctgtgtgaggccagattttcttcatatacttcaaccaaaacaacatatcgcaacagattga
atgcagaagcagatatgagaatccagctgtcttctattaagccagacattaaagagatttgcaaaaatgt
aaaacaatgccactcttctcactaaatttttttgttttggaaaatacggttatttttcataaaaatgtta
tttatgttaacatgtaatgggtttattattttwaaatgaatwaataaatattttaaaaatttctcagttt
taatttctaatacggtaaatatcaatagatataacccacataaacaaaagctctttggggtcctcaataa
tttttaagagtataaaggggtcctgagaccaaaaagtttgagaaccgctg
>CHARLIE1B   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgtcgcaacagattgaatgcagaagcagatatgagaat
ccagctgtcttctattaagccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcac
taaatttttttgttttggaaaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggt
ttattattttwaaatgaatwaataaatattttaaaaatttctcagttttaatttctaatacggtaaatat
cgatagatataacccacataaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtc
ctgagaccaaaaagtttgagaaccgctg
>CHARLIE2   DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacatgaagactttccaaggggtatgcgggca
cggatagttttaagggaatcaatttccagatcctcarcttccatatgtactctttcctaaaactgatctg
cctgagaacgcgcctgtggcgagggcctgccgnctttcccacttcccctttcacgatcgcccttctccca
ctttacaaaagaaaggcatacctctcacccatcccgaatcttactatggtgcattgccctggggtgtaaa
aacctccggggcaccaaacaaagggacaattcgaaatactggtgttggtgaagcctcctttaatcaaggc
accataarcccgnngtacagttttatgtcttccctggctttayaaatatttctgttaagggtaaagcatg
atgttggaacaaggtactttggcycatgttggggtgttctgaattcagatatatcntagagtggggtggt
gggagtgatgacgatttttncttgacgatgttgcttcttccatcnctattnacaaagaatacattgctcc
tgaggaagagtcctgagagcaaagcaaagagaacattgntaagaaatggcgaagatggcagtgcnttatt
tcatccaggtgacaaactcatggcgaggtctatctatctgakagttggaatattcaagatwtgkaaaagg
cattctgggaaataccaatcngctacgaagcatgcctcctctgcactttcaccattctcagtantgagaa
agagcttggtgagtactctcattcacctgcgtcttagtctgkgtctcagttgcatattttgcatgatttc
aaggmggtggaggcgaaaagctctgcaattacttctaacagatcaacattacattttcaagtaaaaggaa
catatattggaggtaagttmrtgtatkctattttcttgaacatttattcagattmataggagaaacattt
tcattaacttttgccaaagatttctagatagtgtaaatatatttttctatttaggcamaagtctcctgct
cactgtcactcatgaacmacttctctgttcatttattnattcctaccatatacttactagagttagatta
anttaacaggaatatgttgcagattctactgtaantaatgcacwtaatagcagtcagtaatataactttt
gtaaacccatanttattaatgatccaatancttctctctcnttttgctgwcgatttccacaaagtagatt
aaactgtactcttaaaagcagaacattcacttatgtacgagtgcaggacagaatgttccaaaatgcaats
tagaatgcgatgcccwgaacttcagaaaaccagcttcacttaattaggattaatttctcccgctcggang
ctaatatactgttttanttctgtcaaatgnatnattataagtaataatttttnacaataacgaaattant
antatatacatgaatannctcaagtgtccgtccctctgtcatatttttaaaatgcatttngagacgttct
taaaaaatgaaatwtggtattgtntataggtctctgttcgtagtcgakgagamaagtccccaaatncaca
atttacaatttttcgwtttttccaactccttccatgtatattgaggtccataagcaaggtgcctctaagt
gaaagagtagcaggnataattaatagtcatttgataagtcttggtgaagccttttgggtatacttcctag
aaactgagaaagtgaatgactctaatgactgggtaacaaatccttttgcaagtcaggtggtttccaattc
tttgctttcaacaaaattgaaggaggacctaatcgagttgtcagctgacagatcattaaaaataattttt
gatgatagatcaytatgtgatttttggcatataactcggaaggagttcaaagaattgagtgacattgcta
taacaaaactccttccattcccatctacttatttatgtgaacaagrtttctcagcgcttacatctataaa
aatgaaaaataggaatagaattgatgctgaactctgtctcattctagcaataagtaatattcatccacgg
atacatgaactaattggggaaacaaggccccatccatctcattaagagatgcatttccaataaaatttta
ctttttatgtttawtatttatcaaaatttgtaatatgtttatgttgttttgatcaattgtatattaataa
taattgtaatgataactcaatccagaagaaaawttttaacacttagagccttatggtcanarkaaatata
aaaaattaaatttcaatttatatacatatttttgttgcagagaagtatgatagggtgatcaataaaagac
tttcaagcataaaaatatattacattaggataaaattctgtgggggaagtggaatggaaatacgagttca
aggagaaaaagagaacaatgtaaaatttccgactgttaaagaagagcttgctcatgtattttttaaatgg
atgatggtgggtatcaaatcgctatggtatttagattccattggatacatttaaaagagtgatgtaacag
ttttattttaaaatgtcaatatttacaatatgccagaaattacatcctttgcaactatttaaacttatga
tgaaaaattttagatgtcaacttaaaaatgtgcgagggrgtacatagtttttcaaaattcttttagggga
tacgcaagcaaaaawgtttgaagaccactg
>MER30B   DNA transposon.
cacgggtgtccaatcttttggcttccctgggccacattggaagaagaattgtcttgggccacacataaaa
tacactaacactaacgatagctgatgagctaaaaaaaaaaggtctgtgcataattttcgtgatatccacc
accacagataagcaaaaaagtccttgcattcaaagggttggacaccgctg
>MER45B   Nonautonomous hAT-like DNA transposon.
cagggccggcttcatgggcgtgcgacctgtgcagtcgcacagggccccgcgctcagaagggccccgcgct
tggtttaatgctctgctgtcgccgtcttgaaattcttaataattttatctttgaacttgtgttttgtaag
tgaagtccgatgggacaatggagcatgcgcgtgagcagaggagatacgcgcaatatgcgtgtccgccgtt
ccttgccgccccatttgcatatagcgttcgcgatgccccatgagcacagaattccggtggacccacgatg
cgtgggagttcagcgagactcaaagcgagtacaaggtaagcgtgttacgtctacgactgagtaagcgggg
gcgctgacagccccgagaggccacgctttccgttcgaaccagaacttgcttcgaacgcagaaagaaggca
atggcattctaagaaacacgaacgaccaaggaaccctatcatatcctttcttactcgtgttacttccctg
tattagccaaccacttacgctgaaaatgatgacatagaaggaaagggaaagatagggcaacccatagttc
cttttcctttcagtccttccttactcatcagtaagccgaaggtagagagtgttggtagaatgtgcgcgta
tcaagaagtgaaataaaaacagttgagttagttttgtgcagcgtttccactgttctggtaagaacgaaat
acatatgcatgtacgagctacgaaatacgaattgtgtaatttcggtgattccgcatacgagttaaatgct
cttatatttgcatttaaaactggcattgcacaatataaagatgaatggtaaaattcatgctaataattta
aaattttaatttttctttacttagaatgacattaaatagcaaatataaaaacaccatgacaagtcgagag
agagaccgcggaagaaaggaaaaagctttatattttagtacctttaatggcacttttttcctgctttttg
aacaaggggccccacattttcattttgcactgggccccgcaaattatgtagccggccctg
>MER45C   Nonautonomous hAT-like DNA transposon.
cagggccggcttcatgggcgtgcgaccagtgcagtcacacagggccccgcgctcagaagggccccgcgct
tggggtttaatgctctgcggtcgccgtcttgaaattcttaataattttatctttgaatttgtgttttgta
agtgaagtccgatgggacaatggagcatgtgccgggggcttggagcctcggctcacgcgcggtcccgcct
cccgctgcctccccgcctccccgggatgggttctcggccgcccgctcccctgccccctggtgccccgggc
cccacctgccttctccctccncgcccctgcccagcgaccactgccgccctctgcccccagcaggggcctg
ggcacgggtgcggggagggtcagggttgggtgcacgcgccctgtggcatctcggggcggggcatggcggc
ggctgtccccgccctgggctggcagcgccacggcgcattcggcgggcgactcggcgggggcgagcctctc
gcccacccctgatccaggtaccgagcgcgtcctggcacggaggttgcaatacccttgggggtcgcccgtc
tgccgtgggttggggcagcgggcccgtgggaaggggagatgcctggctcgacttccccgcccctggccgg
ggcacggtgcgtcggcccagcggctggcgggagggggaacctggcagctggtgggcccatgngtgcgcac
ccccaagtcgcagggtgggnccccgggtacctgtgagggtctgcactcgccccgcgagtatccccgtgcc
cgagggagcgtgacattaaatagcaaataaaaaacaccatgacaggtcgagagagagaccgtggaagaaa
ggaaaaagctttatattttagtacctttaatggcacttttttcctgctttttgaacaaggggccccgcat
tttcattttgcactgggccccgcaaattatgtagccggccctg
>LTR25   Long terminal repeat of endogenous retrovirus - a consensus.
tgagaggagttaactaacttgccttaggtagacagcaagggaagggtccctggagagcccctgacccacg
ggtcagtgcctcatccccacataacataaaaaagcagcctgggaaaaaaaatcaagctgcaggcaccaat
aagggaactagcacagggggttgtgcctggagacatgcccacggctgcacagataggagaacctccagcc
cattcagataaaaacttacacaaacctccggctcactcagataaagaaacaaggcctgacataraaatgc
ctttgtcctttgtataatcagcgggctcccaggaaaaagtttcttctccttttgtgggcatgaacacagt
gggctctggtgggttccggtggacactttcctttcctttttttggactgtaagcctggcctctatgaatc
atcacttcagctcctgattgrtcccgggccaaggtcctgggccaaactgagtagccnctgtgaatcatca
cttcaactyctgattggtcccaggccaaggtcccgggccaagctgagtcacacgttctccaagacagccc
acagactaaacacattccttccccttcccagtccataaaaaccccagaccccagcctcatagkggrcaac
ccattcgggtccccctctccgctgrcagagagctttcttctttcacttattaaactttcactccaacctc
acctttgtgtccacgctccttaattttcttggaggtrrgacaaagaactctgggtaytatctcagacaat
gagagactgctacatnttggtgca
>LTR26   LTR from human endogenous retrovirus-like sequence.
tgaaaccgtccctataaactttataaaattaatcagggaagaagrgagggggagaaatgaaaataaacca
agcttgcagcacattcagcattaatcatkaggtcagcttgctctctgacctgcttcctcatagttgtttg
gtgcctattgcctyagaatcacgtagaccctgttacaagattatagttccccttaactgctctatagata
acaacttgaacattatgaaacgttaagttttccctttgagatattccttcgggtcctgcataccgatgaa
actactgacaactgacgycagctggtctgaaggaccccacgaggagctgactcaccaaagaatgcagttt
ccacatcctgatgatttcatcccccttaccccgaccaatcaacaaccccaattttccagcccctcgccct
ccatgatccccttaaaaaccccagcccagaactcctcggggagatggatttgagggtctcctcccatctc
ctcgctcagtgccctgcgatcattaaactctttctctgctgcaaaccctgctgtctcagtgtaattggtc
tgttactgcgcagtgggcatatgaacctgttggtcctataaca
>HERVK9I   HERVK-related endogenous retrovirus. It is flanked by MER9 LTRs.
[encoded data, 5964 characters]
tcaccgtgacaaagccgcccttgcttttatctctttgcaaatcaaagaagggagaca
>HERVH48I   HERVH-related endogenous retrovirus flanked by MER48 LTRs.
[encoded data, 6603 characters]
attgagaaagtcgtcccttttcccttttctataaccaaatagacaggaa
>MER11C   LTR from HERVK-related endogenous retrovirus HERVK11.
tgttgcgggaagtcagggaccccaaacggagggaccggctgaagccatgrcagaagaacgtggattgtga
agattttatggacatttattagttccccaaattaatacttttgtaatttcttatgcctgtctttactgca
atctctaaacataaattgtaaagatttcatggacacttatcacttccccaatcaatacccttgtgatttc
ctatgcctgtctttactttaatctcttaatcctgtcagctgaggaggatgtatatcgcctcaggaccctg
taataattgcattaactgcacaaattgtacagcatgtgtgtttgagcaatatgaaatgtgggcaccttga
aaaaagaacaggataacagcaattgttcagggaataagagagataaccttaaactctgactgccggtgag
ccaggcagaacagagccatatttctcttctttcaaaagcaaatgggagaaatatcgctgaattctttttc
tcagcatggaacatccctgagaaagagaatgcgcacctrggggtaggtctctgaactggcccccctgggc
gtngcctgtctcttatggtcgagactgcagrggtgaaatagactccagtctcccatagcgctcccaggct
tattaggaagaggaaattcccgcctaataaattttggtcagaccggttgatctcaaaaccctgtctcctg
ataagatgttatcaatgacaatggtgcccgaaacttcattagcaattttaatttcgcctcggtcctgtgg
tcctgtgatctcgccctgcctccacttgccttgtgatattctattaccytgttaagtacttgatgtctgt
cacccacacctattcgcacactccctccccttttgaaaatccctaataaaaacttgctggtttttgtggc
ttgtggggcatcacggatcctaccaacgtgtgatgtctcccccggatgcccagctttaaaatttctctct
tttgtactctgtccctttatttctcaagccagccgacgcttagggaaaatagaaaagaacctacgtgatt
atcggggcaggtcccccgata
>MER11D   LTR from HERVK-related endogenous retrovirus.
tgtagggagaccccctgaaactattgctacggaataaaagatgaaatgctcctgattattgtaaatacaa
aattgcatgcaggattgtgtaaagacaatgccaggttggactgccagaacgagccaacagcgcgtgatgt
gcttccccctgcagagagcctatgaatggacgtgcagtcagggaggtttcacatcaccaagattcctatc
ccagaaaagcagatgttcatagctctgggaatggaatgcgacccttgtggagagcctataaacggacgca
tggggggcgcctgtccatatggataagatagggctataaacgccctcatcttgccacggctcttctaggc
ctctttagggttaaggcatactcccttctgagaatttctggtctaaccggttgtctagcttcacgtcctg
tttccatggattgtttgtaaccagcttttgttgcaattgttactgctgattaatatcttgctaatcatag
gttatggaaagaytgtgtttctgttttaaggctctgttagaaattactgacgcacacactatattgtaaa
ttcttatctctgtatactgtacttctacatacaaatgtactgtacttctacatacaaatgttatgttaaa
gaattacttcatccccatgtgaccatctcacctcataatcaaatgaccctaaatccctcactaacctacc
cccgccctcactaaacttaataataaatgctggtatatccagtgcattgttggcaccgtgggaccagaag
gcggtgacccccctggacccagctttcactatcttgtgtgtgtctattatttctcaacctgccgatccgc
ctaggagcaaagagagagccccgttgcattgcgggctgctggccagatcccgcaata
>LTR10D   LTR from endogenous retrovirus.
tgtgggatatgatgaggtttctcttcaaataacctgatcaatcttttattctttaattcatagtaccccc
ctccctycttttttcytttttctccttttttcctttttgcctttgttagatgcccaggcacgccacagta
ccaggcgttatcaataccagctcacattcctttccttatttggaaaaaagactaactttctagctcatta
cagacaccccttcccctttcctctccgctttcttttacgtgcccaccttatctaaaaaaaaatcaaatgt
ttagccaaccgggattagtttagattgtatgacccaaccccagccaatggggaaagggtacaagggcagg
acttgcatcaraaataaaggctctcgtgcccctttgttcaggtgtgctctcatggcgactggccaaggag
aagcacccctctgcgcagaagtaaaattgctttgctaagaatcctttgttcgagtgttcaatttccttag
gattttgagcgttattcctaaca
>LTR14A   LTR of human endogenous retrovirus.
tgggagaaaagctgagtgttgggagagaagctgaggcagggcttgcatgtctgctagacttgctggctcc
ttgcttctagcactcccattatctcaagcagccatatgtttctcattcacttgatacactgtttcctttc
aacccccacatcctcaccacctgtttctttgtttgagcaccaataaatagcgtgggctcccagagctcag
ggccttcgcagcctccacactcgcgatggccccctggtcccactttctctctcaaactgtctttttctca
ttcctttgactccgccggactttgtcgcccccacgacctggtgttgggtctgatcaccccaaca
>LTR14B   LTR of human endogenous retrovirus.
tgggagaaaagctgagtgttgggaaaagctgaggcagggcttgcatgtctgacataatgtaaaagagtct
tggaacatgtccggggtccagggtctaaaacccctcgtggcctttggaacaccaagctctgtgctaaagg
gtggaaggctaccctgacgcaccataatctaagcccagggcataaaacccctcgtggcttggatagaatc
cagggctcgtggcctctggaatgtgtctagacttgctggctccttgctccttgctctcccaggatcgatt
gtatcttgagttaaaagaacctgctctccattatctcaagtagcagaacatgttccatatgcctcaaagg
aaatgctaaaccatcacagctgtagatcatgcgcttaatgcaacttgccctttcgacccccacattctca
ccacctgtttctttgtttgatcaccaataaatagtctgggcttccagagctcggggcctttgcagcctcc
atacttagcgttggccccctggacccactttctctctcaaactgtcttttctcattcctttgactccgcc
ggacttcgtcacccccacgacctggtgttgggtctgatcaccccaaca
>LTR27   Long terminal repeat of endogenous retrovirus - a consensus.
tgtgagagcagcaggaggcagccaatgcctaggtaggcaggggcaggtccctgtgaaacctcacctccag
gccgaagacagcttaaatcctgaaagccaagctaccatttaaatccttggaccagactgagaacttgtct
tcctgtttggtgtgctttcctctgattgatccctacccttcacctattttatgtatacctaccctttcct
aattggttttctgtactgccaggcccacttctgcgtggtgtctttgctttaaccttttttgcatactcac
aaaccaatcagcatgcactccccattctgagtccataaaaggccctggacccagccacatgggggacttt
cctgccttcaggtagggggaccacccctgtgtcccctctgtatttaaagctgtttcatcattcaataaaa
ttcttctctgtcctcctcacacttcaatgttcagtgcatcctcattcttcttggatgtgggacaagaact
tgggaatcagtgcacaagccagacttggcctgggaaggccaactgggcagggcacctcctgcggcagata
gcatgccctgggcaaggcctctggcatcgccagccagaagtccctgactggcaaagggaccgagaaaaat
cctgca
>LTR28   Long terminal repeat of endogenous retrovirus - a consensus.
tgatagcgacaggaggcagmcaaatgcctaggcagataggggcgggtccccggtgaaaccccaccttcaa
gccaaagacagtttaaagcctgaaagccaagctacaagtcccggataaatcctcagaccggaktgagaac
ttstcttcctgtttggcgcgctttcctctgattgatccccacccttcacctattttacatatacccaccc
tttcctaattggytttttacactgtcttgcccaccttcgaatgttgyctttkttttaaccttttttgcat
actcacaaaccaatcagcacgcactmccccccatcctgtgcctataaaaaccccagactcagtcagtaga
ggagangacagcttgacttcatasttggnagaagrattgggagagagacaacctgacttcagggaagacg
acctgcccttcccgtcccctctccagctcccctctccactgagagccgctttcatcactcaataaaattc
tccgccttcaccatccttcaattgtcagcgtracctcattcttcttggacgccggacaagagctcgggac
ccaccgagtgcgggtacccaaaaaggctgtcacactggccctttgccctcgctggcggagggcagccgcc
ccacatgacagaagcagcggcggggctgagccagccchagagccaygggctggagtgaggcaaggggccg
actgagctgttaacacgcatccgtctgcagacggcagaactaaaagagctawttagcayactgtaacacc
ccctctggggcttcggggtcgcgggcayccytacctgggtgctgccgcattcccctccaggtgacatgcc
tggtctggccgcaggccctgcacagagcttgctcctgtgccggtgcccgaagcagccggccagatcccgc
actcgctcgctcgcgtgctccctcccgcaaggggytgagcgbggcgggctgagtagacggggcacccctg
ccatgagtccggtgaaggggycaagaaaaatcctgcatca
>LTR29   Long terminal repeat of retrovirus-like element - a consensus.
tgttggggctcagaaaccgataccccaaaatatggcgttttgacatgctgaactgaagaagcctcaaggt
ctctctgacctccccccataccccccaccgtctctcccaaaacactggataagttgttctctgaagttcc
cttatctgcctaaggtccagacccaccaaggagaacaattgttttttnttcccctccctgttatctcatt
atctattgcaggaaagaagaccaagaatgtaaccacacctgaacagacccttttncaagataatgactgt
ctccaaggatcatttaaattccaaagagaactatttacaagttaatctctgttccccggatccantcatt
ctccctagtaatcatttattgcccctcaatagaattcctcttctcccccttcccataacctgttttgcca
ggatccaagcccccattctttctgtaacctcaagatggtatataagcttctgnacctcattgggaggttg
ggtcttcattctgaaggctcccgtgtatacacgttaaataaatttgtatgccttttctcctattaatcaa
tctgccttntgtcagtgatttttcagcgaaccttcagggggccaagggccttggcccccaca
>LTR30   LTR from human ERV9-related  endogenous retrovirus.
tgagaggaggtkccagctgggcttcctgggtcgagtaggggctcagaaagctgtgaaactcactcatttc
ctgcatcaggacttacttcggtcctggatgaataatattgaagatatatgcttaaaatattcctaacayc
aggatttgtgcatgtgttttcttccccaagaaagctataaacagcaaaaattttgctgtaagcttccctg
tgtccttctctccctctctcccttccccctcccctaaaactaaagtaaaaggaatgttaaaagcccatta
ttttctgtgaccagcagaccttatctatgctcccaattccaattccttgtaaacacactttgtaaartcc
tgtragatcctgtctcctttgccatgccgctgcaaggtyataaagtagataaaacytaagttrcaattcc
ggttttcctcaagatctaagacatgtcmcaaaataatttactgyctttgtttcttgctctggtaacatct
tcccgccgcacgtatttcccgccttaaagagtttaaaaggcgatcaaacaaatctaacactggctacccg
ctcgggaccccttccacgctgtggaagctttgtactgtcactctgctcaataaagcctacagcttttttt
ctctcttggtccgatccgtgtctctcwctcgccgcgggcwgccgccacaccaaatctttggcgtggctaa
ggcaagaacctttggcgttaca
>LTR31   Putative LTR from MER4I-MER41I-MER57I-MER65I group.
tgcttgcttttggtcacttgctttgtgttatcgttnttattkttttcctttttccatgaagctgaaggcc
gcagtagctgaaggccttgccgctgaatgctgaaacttaaccttcactggctactttatagataacattc
ataggtcaccacggtaacggttgcttacagttgtttttcarggaactkgggccagctcctgtccagttca
aaccggttgagaccackaacccttcaactgggcctgcgcaagtgcccaagaggtggccttttgacgtcgg
agggccaaaaactccaccctcagatcacgctaacgccaccattttctgtacatgtgtcctatgaartgcc
atgaagcccgactacgcttgcgcagaatgaacctrttacttcatttttccccactgccaatcacctttcc
ccacaccttagaccaccccgcttctctaacccataaatatccctaagccttatcttcggggaggcggatt
tgagagctgttctcccgcctcctcgcttggcggccttgtgaataaatcttttctcttttgcaaaacccat
cgtcacagtgattgrcttactgcgcgcgggcagaacggacctggacctggccagtaaca
>MER61B   Primate MER61B repetitive element - a consensus.
tgatagagacaggaggcagccaagggtcccccggtgaaaccccaccttcaagcctaaaacagcctgaagg
ctgaaaaaccagactgctggtcccggatgaagcccaccctttcctgactgattctctctgaataatgccc
acctgcgcactgggaggacggggtggagccacgggaagttcgtgccttgtgcagnggggaggagcctggc
ctcttctgttcctgtgtggtggcctggggttcaatctgtgaggtgggagcctgttggcaggactccctct
cgctttgctgagagttgtttttcctttttccttttcgcccaataaattctgctcctcacccttcaatgtg
tccgcgwgcctaatctttcctggtcgtgtgacaagaacccagttttagctgaactaaggagaaagttctg
caaca
>MER61C   Primate MER61C repetitive element - a consensus.
tgatagatgcaggaggcagataagggagggtccccggagaatctccgacccgccccacaagtgtttacat
cagatgcttttgtgcagatgagggaacctgcccagggccttgtctgggcatgcccacaacgaactggggg
gcccacctgcgcactgggagaatggggtggagccaccgggaagttcgcgccttgtgcagcggggaggagc
ctggcctcttcagttcctgtgtggtggcctggtgttcaatctgtgaggtgggagcctgttggcaggactc
cctctcgctttgctgagagttgtttttcctttttccttttcacccaataaattctgctctcctcaccctt
caatgtgtctgcgtgcctaatttttcctggtcgtgkgacaagaacccgggttttagctgaactaaggagc
aaaatyctgcawca
>MER92A   Primate MER92A repetitive element - a consensus
tgaccaagtgttcacagttgttcgcttcttaccctctncttcgccttgacagaactttagtcaggcttct
ctccttcctacaggcccctgaactttgcttgcccctaagcctgagcaagcactmaaatgcagaacgtgcc
ccccttakcagcttgtcctgagaatcggctgaccacagcgggacacatttcctgtcaaaccccaccnatc
atgttgtntgctcgntccccctcgcttgcccactgtcycctttctactggttctgcttaycyctccctat
aaaagaaaagcctttttctgtttgattttgagacgcttgcaagttcctgaggtcggagcgttctccctat
tgcaatagtctttttgaataaagtctctccttatctaagtccggatttgtttttatttgaca
>MER92B   Primate MER92B repetitive element - a consensus.
tgacaatgttgaactttacctgagccctgtgctcctggaaaacagtgawggttaagaaatccccccatcc
ttttgtgttccgggaaacggcttactgcaaagaaccatccttccccatatgacttagataagactcatgg
atgncccccttgtttacctatgacaaggccagacacagaccctccaaattcccattctttgcctcataaa
tgattagctgaactgtttgtccccactgatcaatckggacaaaatacctgytaactcgactngaccaaac
tttagttaagcttctctccttcctccaggmccctgaactttggaccaccctcagcctgagccagcatcan
aatgtagaacagcccctcctgagaataggctgrcctcaaggtaaracattctctgatctactctgatctc
gccaccctttcatcccactcccccacacctggttctttctagccttgtttactcctccctataaaagaaa
agccctttctgcctgaactttgagatgcttgcagatcttatggtcagagcgttctccctattgcaatagt
ccccytccccccmttgcaatagtccttttgaataaagtctctccttagctaagtccggatttgtttttat
ttgaca
>MER92C   MER92C repetitive element - a consensus.
tgacaatgcwgaactttacctgagccctgtgctcccggaaaacagcgatggttaagaaatccccccatcc
ttttgtgttccnagaaacggcttaccgcaaagaactacccttccctatatgacttaaataagactctctg
ncccttctttctcacgacttccataagatcannnatgattccttncctgnnaagaccaaacacagacctt
tccccttttgcctgaacccgctgacaaggccagacacggaccctccaacttcctattctttgtttcataa
atgattagctgagattagaagngtctgtccccctgaaactagctagacacagagataaacatttcctgtt
cagctaaccgagacttcccctgattgcaaaacaaccccccctgtaaatctccccacntgaaacctatcta
ccccttcctataaaagtccaaggcaaaaccaccctgccgagacacttcatagtcttcggatcttggatgc
tctccctattgcaatagcctgaataaaatcatctccttamttgtctagtgcattttgtctttca
>MER93   Primate MER93 repetitive element - a consensus
tgttaaaataattaawtgggaggccattagactgaggtggctctagcgccctgggttcctacgtaagcaa
accgaaacctaactcagncgtttcttanaaataactatnaagaraaaatgaaacttaagctyagccaatc
acaarcsgccaactaacctctgattacataaccagggacttcccacctggacagtccaaatraggngact
gcncaactgtaaccaatcaaatactttatttgctctgcttcctcatncaccytataaaagcctttccttc
aagcccctccggcggagccccaaaccacccgtggtctggggctgcccgattcatgaatcactgtttgctc
aaataaactctttaaaattttaatgtgcctcagtttatcttttaaca
>MLT1H   Mammalian long terminal repeat (MLT1H subfamily) - a consensus.
tgtggtagattgattgcaaaaatggccacaattmtccacccctccctgtatccatgccctttgcaatgtg
actttgcagctcctcccatcaagaggtggagtctatttccccaccccttgaatctgggctggccttgtga
cttgctttggccaatagaatgtggcagaagtgacggtgtgccagttctgagcctaggcctcaagaggcct
tgcacgcttctgctctctctcttggaaccctgccaccgccatgtgaacaagcccgggctagcctgctgga
ggatgagagaccacgtggagcagagccgagccgtcccagctgaggccatcctagacnggccagcccccag
ccaagatcagcagagccgcctactcaaccagcagctgaccacagatgcatgagggagcccagccgagacc
agaagaaccacccagctgagcccagcccaaattgccgacccgcagaatcgtgagctaaaataaatggttg
ttgttttaagccactaagttttggggtggtttgttacgcagcaatagctaactgataca
>L1P_MA2   LINE1 subfamily consensus; L1PMA2 subfamily.
[encoded data, 7739 characters]
tctcatgtaccccataaatatatacayctattatgtacccayaaaaat
>LTR32   LTR from human endogenous retrovirus.
tgtcnataaccaagtgtatggtagacgcacctgacagcaataacttaagcataccctgagaatgaccctg
tatggcagatgcacctgaatgtgtgtttggagttctgagctaaggaatccgggagtggccaacccggaga
ttcattccttatctatgaggaacatctgagcccccggcccgtcccgtggaacgcaggccatacaggggat
cgaggccctttgttttgggttaaatgaaggttgccaggtggaggttgttagggggagggtgctaagtgaa
aatgctatataaactgcatgctttttrcaagcggttgcggttctcctgtccagcccaccaccactggact
gtcttccctgtatgtaagtccccaataaaccctatgtctcatttgctggctctgggtctcttcttcggcc
tcttgaacctggtgccatccctattggagtcaataggggtccggcacaaca
>GOLEM   Autonomous DNA transposon; POGO superfamily.
cagtcatgcgccgcataacgacgtttcggtcaacgacggaccgcatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgtcgtagctgtcgtaacgtcatagcgcaacgcatt
actcacgtgtttgtggtgatgctggtgtaaacaaacctactgcgctgccagtcgtataaaagtatagcac
atacaattatgtacagtacataatacttgataatgataataaatgactatgttactggtttatgtattta
ctatactatactttttatcgttattttagagtgtactccttctacttattaaaaaaaagtttactgtaaa
acagtatgccgtgttacaccggcagcagcctcatacatctcgtgtttaccgcgtctcttgattgcatcat
tttctcttgtgcttgatttaatctcgtgttgttttgttcatcatggcccctaagcgtacaaaatccacgg
ctaatgttgccagtaagaggccacatcgagtgactgacctggaaacgaaattaaaagtgattaaggacta
cgaaggtggaaaatcagtgatggttattgctcgccagtcaggcatgtcccattccaccatagctacgatc
ttgaagaacaagaacaaagtgacagaagctgttaaaggatctgcttcattgaaggcaacgagactaacaa
aaattcgagaagggcctatatcagatatggagaaacttctaatgacctggattgaagaccagacacagaa
gcatatccctctcagcaccatgacgatcacggccaaagcaaaaagtttgtttgcgatgttgaaagaaaag
gctggacccgactacgatgttgaatttactgctagctctgggtggtttaaacgattcaagaatcgttatt
cattacataatgtgaaagtgagtggtgagtctgcgagtgctgatgtgaaggcagctgaagaatttttgga
aactctagataagctgattgtggaggaaaattacttgccagagcaaatcttcaatatggatgaaacctcc
ctattctggaaacggatgcctgaaaggactttcatccataaggaggccaagtcaatgccaggtttcaagg
cttttaaggacaggataacagtcttgcttgggggcaatgttgcaggctacaaattgaaaccctttgtgat
ctggcacagtgagaaccccagggccttcaagcatatcaataagcacacactgccagtgtactacaggagc
aataagaagtcatggatgacccagctcctcttccaagatgccctcctgaattgctatgccagcgaaatgg
agaagtactgtttggagaataacatacctttcaagattttgcttattgttgataatgctcccgcacatcc
tccttttattggtgatcttcatcccaatatcaaagtggtgtttctccctccaaacaccacctctttgatc
caaccaatggatcaaggagttatagcagcttttaaggcctactacctgaggaggacctttgcccaggcta
ttgctgcaactgaggaagacactgagaagacactgatgcaattctggaaggattacaacatctatgactg
catcaagaaccttgcttgggcttggggtgatgtcaccaaggagtgtatgaatggcatctggaagaagaca
ctcaagaggttcgtccgtgacttcaaaggatttgccaaggatgaggaggttgcaaaaatcaacaaggctg
tggttgagatggcaaacaactttaacctgggtgtggatgaggatgacattgaggagctcctagaggtggt
tcctgaggaattgactaatgaggagttgttggaactggaacaggaacgcatagctgaagaagaggcaaga
gaaaaggaaactgcaggagaagaaaaagaagaacccccaagaaaattcacagtgaagggtttagcagaag
cttttgcagacctcaacaagctccttaaaaagtttgaaaacatggaccccaacaccgaaaggttttcatt
aatagagaggaatgttcatggtgcattatctgcttacaagcaaatctatgatgaaaaaaagaaacaaacc
aagcaaaccaccatggacatatttctgaaaagagtgacacctcctcaagaagagcctcaggcaggtcctt
caggaggtattccagaagaaggcattgttatcataggagatgacagctccatgcgtgttattgcccctga
agaccttccagtgggacaagatgtggaggtggaagacagtgatattgatgatcctgaccctgtgtaggcc
taggctaatgtgtgtgtttgtgtcttagtttttaacaaaaaagtttaaaaagtaaaaaaaaaataawttt
aaaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtacagctgtacaatgtg
tttgtgttttaagctaagtgttattacaaaagagtcaaaaagttwaaaaaattaaaaagtttataaagta
aaaaagttacagtaagctaaggttaatttattattgaagaaagaaaaatattttaaataaatttagtgta
gcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcacattcactca
ccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaagtgccctata
caggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagatatgtttaga
tacacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttg
tagcctaggagcaataggctataccatatagcctaggtgtgtagtaggctataccatctaggtttgtgta
agtacactctatgatgttcgcacaacgacgaaatcgcctaacgacgcatttctcagaacgtatccccgtc
gttaagcgacgcatgactg
>ZOMBI   Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>ZOMBI_A   transposon - a consensus.
caggttgagcatcccaaatccgaaaatccgaaatccgaaatgctccaaaatccgaaactttttgagcgcc
gacatgacgctcaaaggaaatgctcattggagcgttttggatttcggattttcagatttgggatgctcaa
ccggtaagtataatgcaaatattccaaaatccaaaaatccgaaatccgaaacacttctggtcccaagcat
tttggataagggatactcaacctg
>ZOMBI_B   transposon - a consensus.
caggttgagcatccctaatctgaaaatccgaaatccaaaatgctccaaaatctgaaactttttgagcacc
aacatgatgccacaagtggaaaattccacacctgacctcatgtgataggtcacagtcaaaayacaatcaa
gactnnncnagcnnctncngttgctnttnctgccagncaacnacagnttgtgcacctngntggcaragan
actgacacatttgctttctkatggttcagtgtacacaaactttgtttcatgcacaaaattatttaaaata
ttgtataaaattaccttcaggctatgtgtataaggtgtatatgaaacataaatgaatttcgtgtttagac
ttgggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaatctgaaatc
caaaacacttctggtcccaagcatttcggataagggatactcaacctg
>LTR33   LTR from endogenous retrovirus-like sequence (HERVL33).
tgtgctggatatcttctgtttgcccctccagatccactctccacccttctccaccctgctctgtgccccg
ggaggctgacctctatggactgcatcamcgggctcccttgccctctggcttctggttgggtttggccaat
gggaggcactggcaggagattggagggtggaaggagagwgagatcggggtatttattccccyggctccct
ccctgctgggctgcggtttggcagtggctgcgttcctctaccgaaggccacagctcctgtcgggcagccc
tctccttgtagctacagctmcagctctctctgggttccggtaacmgctccctccccttgccccttcaggc
ctaggggtggtaacagctycccgctgttgctagccccggggtgcttcaccatcccttgttggtttccctt
aaccctgcccacacctttgtaaatagtcccttcattaaactctcctcaattactccatttgagtgtgcca
tctgtttcctgccgggaccctgactgataca
>L1PA12_5   Primate L1PA12_5 repetitive element - a consensus.
ggaggtggccaagatggccgactagaagcagctagtgtgtgtggctctcacggagaggaacggaaggggc
gagtaaatacagcaccttcaactgaaacatccaggtactcgcattgggactaatcaaggaaacaactcga
cccacggagaatggagaaaagcaaggcaggacgacggcccacccgggagcgacacggagccaggggaacc
tcccctgcccagggaagcggtgagtgaatgtgcgaccccgggaaaccacgcttctcccatggatctttgc
aaccctcgggtcaggagatcccctcgtgaacccactccaccagggccttcagtctgacacacagagctac
gtggagtctcggcagagcagccgctcaggcacgcgcggagacccnggagccttagatacccgggctttct
gggcttcccggcaaaagtagctgcaactccggcaaagtgggaggttagacccccgtacatacccctagga
aagaggctgaatccagggggctgagcagcgacagcctgcaggccccacttccacggcacctcacaggata
agacccactggcttggaattccagccagccaccggtagcagcgttgcacctccctgaganggagctccca
gggggaggggcgggccgccatctttgctgtttgggcgacttagccattccagccttcgggctttggagag
tccaagctgaccgggggcggaagggatcccccagcacagcacagctgctctaccaaaacgtggccagact
gcttctttaagcgggtccccgatcccgttcctcctcactgggcgggacctcccaaccggggcctccagcc
acccccgccggtgttctccggccgacagagatttgaaacctccctgggacggagctcccagagggagggg
cgggccgccatctttgctgtttgggcgacttagccgttccagccttcgggctttggagagtccgagccga
ccgggggcggaagnggtcccccagcacagcacagctgctctacgaaaacgtggccagactgcttttttaa
gcgggtccccgatcccattcctcctcactgggcgggacctcccaaccggggtctccagccacccctgccg
gtgttctccggccgacagagatttswaacctccctgggacggagctcccagagggaggggcgggccgcca
tctttgctgtttgggcgacttagccgttccagccttcgggctttggagngtccgaggcgaccgggggctg
aagcggacccccagcacagcacagctgctctacgaaaacgtggccagactgcttttttaagcgggtcccc
gatcccattcctcctcactgggcgggacctcccaaccggggtctccagccacctcctacaggtgcnttcg
ggccggcaacaggtccgtacctccctgggacggagctcccagagggaggggcaggctgccatctttgctg
tttcgcagccttcactggtgatacctccaggtactggaaaatccgaggcgactagggactggagcgggcc
cccagcataccgcagcagccctacggaaaagtggccagactgttacgtgggtgcccgttcccatatctcc
tcaccgggcaggtcctccaggcctgggcctccagccaccccccgccagagctatcgagccagtagcaact
cggcaactccctggacagagcctccaggggcaactgaaagcctctctgccactgcctctgcagtggaact
gcccttgctaccctcggactaacgaaggagcaaagaccctaagtgccttatccacacctccaacaagctg
cagtcgacccaaggagaggaggccagtccgtctcccacgggtcccacacaccccccactgctcgtcacca
gacagggaacccctggcttgggcccacagcacagaccctccatcctgggctgattgcactgagcgattgc
tgacctgcatctctctggggtggagcccccaggagacaagcaaangacccttggccacaaccactactaa
ggtcccttcctctgctgcctccaagttggggaaggaacataaacactgagatcgccccagagctgcagtg
ggcagcccaggagtgccaagccacgatctacagccagcactcaagggggagaggaacccacactttcaga
gcattgagagggaacacggctgcaactgtgaggaaacataggggagccacacaaccgagcaagagtctac
caactgaccaataagcctaagtgccacctgctggatcacaccccaaagcttcaacaccaaaaatacctca
ctaacatacccccctctgaaaccagagacaagaagtcagcttcaaataaagaccctgcacaaagcctcgg
cccggtgaaaacatccagaaaagaagtctattgactgtactcaatctacactgcagttaaaggaacaccc
acacgcagagatgagaaagaaccaacgcaagaactccggtaactcaaatggccagagtgtcgtatgtcct
ccaaacgaccgcaccagttctccaacaagagttcttaaccaggctgaactggctggaatgacagaaatag
aattcagaatatggataggaacgaagatcattgagattcaggaggatggcaaaacccaatccaaggaaaa
taagaatcacaataaagcgatacaggagctgaaggacgaaatagccggtataaaaaagaacctaacggat
ctgacagagctgaataacacaatacaagaatttcacaatgcaatcacaagtattaacagcagaataaacc
aagctgaggaaagaatctcagaacttgaagactggttctctgaaataagacagtcagacaaaaataaaga
aaaaagaataaaaaggaatgaacaaaacctccgagaagtatgggattatgtaaagaggccaaatctatga
atcactggcatccctgaaagggagggggagaaagcaaacaacttggaaaacatatttcaggatatcgtcc
atgaaaacttccccaaccttgctagagaggccaacagtcaaattcaggaaatacagagaact
>L1PA16_5   Primate L1PA16_5 LINE1 repetitive element - a consensus.
[encoded data, 4118 characters]
caaataagcacaatcagaaatga
>L1PBA_5   Primate L1PBA_5 LINE1 repetitive element - a consensus.
ggaaaatggyggataggaggcaggactaacttgcagctcccacttggatggacagaacagyrtgtggaga
ctcacaycatgaacttttgctccaagaactaccacaggaacataccaggaaaaccaaaagaattcacaga
ccctttgaaagaagtggcttgctrctgcaaactccatgagacagccraaaaactgtgagtgcccaaagtg
tgagagggggaaagggggaaagtctgcctctgaacacacatcctcactggggaacctgaaaatccagatc
acaggagaaggatttaaccttacctrgagctgaaatgaatttagagagccnagtgaaatataaaagtaga
agaagcagtgggaagagccctgtaggcactcccagtccccagctcaagcccagggaagccatttctgact
ttatctcacaggggtccttggggagggctgccagtggaattggggaargaccacagggagaaggaaactt
ccagctgaactttgtaataatttygacygarcaygaattttcctggrcagaatccgggggatgaatggga
agtgctgcagataygagcacagaagccgcagctgatggtgtgggcaggcggggaggggcgangcctgaaa
gccctgcttgctttctcagyggggaggcttgtagcctggggcaagttctcagccctgctcaccggctgcc
tggaaataaacttggtgctgttgggggggcacagtgggagtgagactggccttgctggctgcatgggagc
tgggtgaggcctgtcactgctggctttcccccacttccctggtgacctgtatgacgcagcagcagaggca
gccataatccccctgggaacataactccattggcctgagaaccacacccccatcccccacagcagccaca
gcaagcccygcccaaggagagtctgagctcagacaygcctaaccctgcccccacctgatggtctttctct
accyaccctggtagcygaagacaaargacataatctcttgggagctctatggccctgcccaccacctgag
aaacctgaatacttatccaggtgaccctagggcaagcttgtatcctccctatactaccacagctgatgct
ctcttgaaagngccacctcctggctggaggccaaccaactcaagccattacagcaactcataacagaaca
accctgctccaaggaaggagaaaacaacagctaattccactgcctgcaacatcctggctaaccagaggtc
ctgagtctgtccacgtgacaacttcactgctagcattgatgctctctggaaagcgccacctcctggcagg
aggccaaccagcacaaaaatagagcattaaaccaccaaagctaagaaccctcacggagtccattgcaccc
ccctgccacctccaccagaacaggtgctggtatccatggctgagagacccatagatggttcacatctaca
accaaggaccctcacagagtccacttcactcccctgctacctccaccagagcaggtgctggtatccatgg
ctgagagacctgaagatggatcacatcacaggactctttgcagacactccccagtaccagcccagagcct
agtagctccactgggtggctagacccagaagagcaataacaatcactgcagtttrgctctcaggaagccc
catccctaggggaagggggagagcaccacatcaagggagcaccccatgggacaaaagaatctgaacagca
gcccttgagtcccagatcttccctctgacatagtctacccaaatgagaaggaaccagaaaaacaattctg
gtaatatgacaaaacaaggttctttaacacccccaaaagatcacactagctcaccagcaatggatccaaa
ccaagaagaaatctctgaattgccagaaaaagaattcagaaggttgattattaagctactcaaggaggca
ccagagaaaggtgaaaaccaacttaaagaaattaaaaaaaatgatacaggatatgratggaaaaatctcc
agagaaatagatancataaataaaaaacaaactaatcacaacttctggaaatgaargacacacttagaga
aatgcaaaatgcactggaaagtytcagcaatagaatcgaacaagtagaagaaagaacttcagagctcaaa
gacaaggctttcraattaacccaatccaacaaagacaaagaaaaaagaattttaaaaaaatgaacaaagc
ctccaagaagtttgggattatgttaaatgaccaaacctaagaataattggtgttcctgaggaagaagaga
aatctaaaagtttggaaaacatatttgagggaataatygaggaaaacttccctggccttgctagagatct
agacatccaaatacaagaagctcaaagagctcaaagaacacctgggaaattcatcacaaaaagatcatca
cctaggcacatagtcatcaggttatctaaagtcaagatcaagacraaggaaagaatcttaagagctgtga
ggcaaaagcatcaggtaacctataaaggaaaacctatcagattaacagcagatttctcagcagaaaccct
acaagctagaagggattggggtcctatctttagcctccttaaacaaaacaattatcagccaagaattttg
tatccagcraaactaagccttcataaatgaaggaaagatacagtctttttcagacaaacaaatgctgaga
gaattyrccactaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctc
aaaatacaccaaaatagaacctccttaaagcataaatctcacaggacctataaaacaataacacaatgaa
aaaaaaaaaaacaacaacaaaacaaacacacacacacaacaaacaaaaacaaacaaacaaacaaggtatt
caggcaacaamtagcatgatgaatagaatagtacctcacatctcaatactaacattgaatgtaaatggcc
taaatgctccacttaaaagatacagaatggcagaatggataagaattcaccaaccaagtatctgctgtct
tcaagagactcacctaacacataa
>L1PBB_5   Primate L1PBB_5 LINE1 repetitive element - a consensus.
kggtgggaagtttctttcagcagaggcacagktgcagtgctgggctcagtggggaaagtctgcgcctcta
ccccaacagtcaggcagccctggtgmttgtgaagggtcttggagaagggattccttctccccctcaccca
ccactgcagacacagctggggcttctcccacaggaackcagcatgggtgcacctatagacagcctttctg
gaacaattcagggtgantgcatccccacaggaggagcgccctccaggttcaggcttgcacgagaggcaga
gtcacaattcctctctacttggaacatcaacattcctgcagatgaaaagaggtgcctgtctgatctgaat
agctggaacactgggacaggagtgwggctgkgaggtggatmgctttcctgctggcctggcaggggagctg
aggtggctcccacccttcmccctgaaaaaacctcagcgcatctmactgagagctcccccagccaccyccg
tcaaggctgggacctctgcccaccattgggtattaaatctacccacctgctttagccacarctggtkyyt
acccakggayacctcccttactggcctgaagcctgaaccgtcaacccagtaaataaaatactggggaaaa
attaaataaataaataaataaagtgcacaccactggggaacgagataagcttcaagagacctctgccatt
ccaaccccacaggagacagtgaacycgctcacacaccaagcacattactactacaaccagcatctgagaa
agccakcacacaaagactctctataaccaaggaactcatacagagtcttcacccctgaaagcacccagaa
ccaaattaggctacaataaactatawwcattaaagtcacatcctcaaggggaaaaaaaattaaaaagcac
agtccaatcaaaaataaattcaaaaataattwgaa
>L1M3A_5   L1M3A_5 LINE1 repetitive element - a consensus.
gagtgawgtcagcaagatggcagaatwggaggtctcaggctccagtctccctcacagaaagtccgactag
caactattcacagacaagaacgcctttgtgaaaaatgccagaacttggaaatgagrctgagacanctncg
tggancacagaaacgaataaaaaccacattaaaagggtaagaggaaccgtctcactttaaccacgttgcc
cctmagtcggcacagtrccacacngagagaawttccccgggcctacagtttctacagtgggaaaagagag
cttagaggtagacatccagcttccctagcattctgagacacttcccaggaagcccactcctgtctcacct
cacagggaacacagggggtaatggcatggctagaccacctggggtcaggtagaaacaaagaaaggaggca
gagctcacagtgaccagtgtgtagatcttggtggtagctctgtgttcctgccagcagtggcacccaatca
gagataccagccaactgcatagcccacctgcaaagctgagctggtcactcccagaagcatggtgggaagt
tcaacctggcttgagtccctagatggctagcctccatgcccagcctcagagcctaccccaaggccccacc
caggcagggagatgcccacctcagcatatttcggcaaagcacaggggctagacctgccagacccaggagt
tcaaacagtggcncagctcagcctcaaagcccaccccaagaccctacccaggcagggagatgcccaccac
agcgcatttctgcaaagcatagrnnrgagggctagacctgcctgacccaggagttcaaacagtagctcaa
ctcagcctcaaagcccaccccaaggctccacccaggcagggaggcaagcctcaaactatgcatttctatg
gagcatagcctctggtcctatccatcccaagcagcaactccacctaacctcagagcccagcctgcagccc
tgtccaactgcagawctcaaatagcggtaccacccagccagggaatacaccctgtgaccctgcctgatca
gaggygattgcagtgcccagccagcagctccgcctgattgcaagagcccagccagtggtcttaccagaca
gcagagcccagccagcagccccaccyaacctcagagcaaaggcagtrgcccagccaactagagaacccaa
cagcaagctctgcctgcccagggtyattaccagctggcccatccagaatcacaggctagactaaatagtr
aaggtctatcactaccaaagaacnacacctgcaaaagctagaagaggtggctgtctcctcaaatgtgcag
rgacancaatgyaaagacacaaggattatgaaaactcagggaaatatgacaccaccaaaagaaactaaca
aagctccaayaatggaccctraagaaatgaagatctatgaaatgactgacaaagaattcagaataatcct
cttaaagaagttcagggaactacaagaaaatatagatagaaaattaaatgaaatttggaaaacaatacat
gaacaaaatgagaaatttgacaaagaaatagaaacaattttaaaaaatagaaatcctagaaataaagaat
acaataactgaactgaaaaaaatccatgaaaaattcaatagaaagcttcaacagcagacttgatcaaaca
gaagaaagaatcagtgagcttraagacagaacatttgaaattatccaatcagaggagcaaaaagaaaaaa
gaataaaaaagaatgaagaaggcctatgggaattatgggacaccatcaancaagagaactaacctttaca
taataggaattccagaaggagaagagagaaaaaggcccagaaagcatatttaaagaaataatggctgaaa
atttcccaaatctggagaaagatgacaacatccaggtacaggaagctcagaggtcaccaatcaaattcaa
cccaaatcgaggaattcaccaagacacataaataatcaaattatcaaaaatcaaagacaaagaaaaaata
ctgaaagcagcaagagaaaagaaacatawtcacattcaarggagtcccaatatggctatcagcagatttc
tcagcagaaaccctgcaggccaggagagagtgggatgatatattcaaagtgctgaaggaaaaaaaaacct
gccaaccaagaatactttacccagcaaagctatccttcanaaatgagggagaaataaaaactttcccaga
caaacaaaagctaagggarttcatcaccactagrcctgtcttacaggaattgctaaagggagttctttaa
gctgaaagaaaaggtgctgctaattaataacataaaacatatgaaagtataaaactcaatggtataagta
atacatagtcatattcagaatactctaatactgtaatggtggtatgtaaagcaattttatctctagtatg
aaggttaaaagacaaaactattaaaaacaactataactaaaataaattgttaagagatacaaantayaaa
aagatgtaaattgtgacatcaaaaacataaaatgtgggggggtaaaagtgtagagtttttgtatgcaatc
aaagttaagttgttatcagcttaaaatagcctgttataagtataagatgttttatgtaagcctcatggta
accacaaagcaaaaacctatagtagatrcacaaaaaataaatagaaaggaatcaaaacatactactac
>L1M3B_5   Primate L1M3B_5 LINE1 repetitive element - a consensus.
ggagtgagaacagcaagatggcagaataggaggtcccccactcatattccctcacagcaacaataatttg
gcagtcatccacgaacaaaagtgcctttgtgggagctttgggatccaggtaggaggttgcgaaacccwgg
tggagcccaagaccaaggaggacnatttgagaaggcaggcctgtgaccagatggcaggcttgctgatcat
ggtcttggctacagacccagaaacaktgctgtmcccctgtggactcagctacagcccyaattggccttgg
tcctgccaccmrmamcatmctccaaganacccaggaggagccatacccacccatgcctcgggtaacaggc
ccgccaanctcggtcctggctgtggaycctgaagcggcccatgacccagctccatcccctctcagmtgtg
gtcaggagccagtcctgcncgcccagggacccgcccagtgacctggnaagagcattcccagggantcagc
aggagccacacccacacatatacctggtawcaggtctaccacgtgcagaaccaactgcagatcctgaagc
agccctgtaactcagttccagctctacccaaccaaggttctgaatgtagtcctgcctatccaaagattcg
gcaagaggcatacccatccgtgctactggaggcaggcttgccaacctcagtctsactgtggatcntgaag
yagcagccatgtgacccggctccaaccccaytyaactgcgatcccagtggmaatctcatcagcccaggga
tctracaggagaaggtcttcctcccaaaaccagtctgtaawgactgaaagaggtgtttgytccttcaaat
gcacggacatcaacataaggctacacagatwataaagaatcaggcaaacatrmcaccaccaaaggaaact
aawaaagttccagtaaccaaccccaaagaaacggagatctawaaattacctgacaaagaattcaaaataa
tcatcttaaagaakctcaatgagatgcaagagaacacagatakacaactaaanaaaatcaggaaaacaat
kcatgaacaaaatgagaagtttaacaaagaaatagaaaccataaaaaagaaccaaatagaaatcctggar
ctgaagaatacaatgaaagaaataaaaaattctatagaaagctttaacaggagac
>L1M3C_5   Primate L1M3C_5 LINE1 repetitive element - a consensus.
gagtgatgtcagcaagatggcagaataggaggtctcagccctatccccccacagaaacaccgattttgac
gaatacmcacggatgagagtacctttgwgggagtccgggagtccagtggacaagttccagcacaccgttg
gagwaaaaaatctaagaatagatgcattgaagagggtaagaagaacagtttcactttacccacgtcaccc
ctcccccaaggtggcatagctcagtgccaagagagwctcctttggtccgcgatttctcccgcaggggaaa
gtgagagcatagtgagtgagcgtccggctcccccagccatgcgggacgctgcccaggaggcccacttttt
tctcaccccacccagaacactgaggkgatcggcatggctgagtggttgggagaggctgaaagcagggaag
agangmtggggactcacagcagccagggcatggaactcaacmaaaggccacagatcctactaactgcttc
gcggactccatcaggaagcccgcccacaagcttcwtgggatacgttgcctgcagacccccccagctggcc
cacgggcgcccccaacgctctgtatgcctcacccctggcttcggcatggctcccaagtgcactcctgtgg
acagcgagtgcaagcctctgcagatggcttacgagcacgcgcagacagccggcttgactctgcwgwattg
gaagaagstacacaaacttgagcatttcagggcaccgccctaggaaaaagaaacggaagcctctttgcac
tcggcctggctttgcaggattgagagaaganatacaatcttatctgcacctagcmtggctttgtgggatt
gagagaaggcatacaatcctaagacttacctcctcctcargagggaacaagaggwgtggagtgggyacat
cmatagaaaaggtctgagagagycccagaatccctagccaggctggttggtgaaggtctttctcttctga
agccagtcagtaaagactggaggaggtgactgtttcttcaaatgtgaagacagcaatgcaagactttaag
aaacatgaaaaatcaaggaaacatgacantaccaaaggaacataataattttccagtaaccgaccctaaa
gaaatggagatctacaaattgcctggcaaataattcaaaataatcgttttaaggaagctcagtgagctac
aagaaaacacagatagacaactcaacaaaatcaggaaaacaatacatgaacaaaatgagaagttcgacaa
agatatagaaatcgtaaaaaagaaccaaacagaaattctggagctgaagaatacaatgactgaacaaaaa
aatgcaatagagagcwtcaacagcagactcgatcaagcagaagaaagaatcagcgagctcaaagacaggt
catttgaaattatccagtcagaggatcaaaaaaaaaaaaaatgaaaaagagtgaagaaagcctgtgggat
ttatgggacaccatcaagagaaccaatatacgcatcatggaaatcccagaaggagaagagagagagaaag
gggcagaaagcttatttaaagaaataataactgaaaacttcccaaatctggggagagatatggacatcca
ggtacaagaagcaca
>L1M3D_5   L1M3D_5 LINE1 repetitive element - a consensus.
gagtgacatcagcaagatggcataataggaagccctggacctttcttcccttcacagacacactgattca
gcaacaattcacggaaaattacctttgtgagaaatgcagaaactagttgagaggctcctgcaccctgggc
gagcgcgaaaccagacccacatcaaagccggtagggagattcaggacaccctctcatcgaagtccctccc
cccggcwcagcgcmgtgcgatcggaaggaaaaaacccccaactcccggcttctcccaggggaggaaaaga
gttggttcgcacgtcaagtgccccracttttccgaggggctacccagaggactgtcttctgtcttgccwg
tctcrgagctctgataggcccggcataatctagacacccgggggagaacagagatggtggtttgggctgg
tagatgccatagctnctcacccctgctcagcacagaacaagnagatgaaaacccccagntctcagctttc
ccctgaggaggaaaanagttgaatggactggaaaacagaattgaatggagcatccaacaatccagctttc
tgggagtgcctaaggaaccgattgcatttcaacttgtcgcgctacgctgatangattnancataccctan
atgctcggcgactgcaaagaacaaaaancaggttggactagtacgaaggtttgagaggnccccaaaatct
ctggctaggctgatcggtgaaggtcttctcctgcataaggccagtctgtgaagactgagagaggtggctg
ctttgtataatgcgcagacaccaatacagagagtcaaggaaaataaagaatcagggaaanatgttccaaa
caaaggaacaggataattttccagaaactgaccctaataaattggagttatanaatttacctgacgaaga
attcaaaacaattgttntaaagatgctcatgaataacatgataaagatgctcaccaagatcaggaaaaca
atacatgaacaaagtgagaatttcaacaaagagatagaaaatgttaaaaagtaccaaacaaaaatcatgg
agctgaagaatacaataactgaactgaaaaattcactagagaggttcaacagcagactagatcaagcaga
agaaaggatcagtgaactcaangacaggtcattcgaaattatcgagtcagaggagcaaaaagaaaaaaga
atgaaaaagagtgaagaaagcctaagggatttatgggacaccatcaagngaaccaanatacacatcatgg
aagtcccggaaggagaagagagaganaaaggnccagaaagcntattcgaagaaatagtgactgaaaactt
cccaaatctggggaaagaaatggacatccagatncaagaagccca
>L1MB6_5   L1MB6_5 LINE1 repetitive element - a consensus.
ggtaatgtcagcgaaaatggcggagtaaggamctccgaaaattcactcctccataaaagcaatgaaaaca
ctggcaaaaattgtcagaatcaactttttcagaactctggaaattaaccaaaggcttacagcaatctagg
aagtgtttattcaagaaaaayagctgaatctcwgtaagaacagcgagctttgtggtattttaacttgccc
tantcccatcccccwctctccagctcagcagtagccttgaaaataacagcttatattatggtgaaaacca
gcagccaccggagkgggcagaacgggtttggagcttctcaaaagycncattcccagggaattgtcattat
ttgacctgtctggcggctccctggaagactccattcamagggcttgtctttatttgacctgactcagagc
tcactcagtgcgaamagcattatacctgggggcatttgttgaaaacawttagaggcaawtgtttaacacc
acagctgcctgaggcagtgrataacagttggggcaaacaagaggctgaccaaaaagcttaaaaggaaaag
ctggggaatgagatgtccgnaggggctttgaaaagctccaacatattcctgggaatctagaaggccacgc
gcatgcccagggctgtacacatgctcagaaaagacctaagaaggccctaagctctcacctctggctgacc
ttgagactctgcacaagcaggaagtgaagactaaggcagagttgtaaactgcctggctgagtgttgaagg
tatgccccaacacacacacagaaccccttggcaaagamtgggagacttgttggttcmaggcatttaagga
aatctctgtccaatcattagctgaccactaagctaacngagcagagacttcagtggccacacatgacaaa
gaatacagactttacaaaattagttcagaaaagtcactaaacaaacagcaacaanaacacaaaagagyaa
caacaaaccctggaaaggagggagaatctgatttccagagttgccacattatattatttaaaatgtccag
ttttcaacaaaaaattacgaggcatacaaagaaacaagaaagtatggcccatacacaggaaaaaaagcag
ttaatagaaactatccctgaggaagcccagacgttggacttactagacaaagactttaaatcagctattw
taaatatgttcaaagaactaaaggaaaccatgtntaaagaantaaagaaaaatatragaacgatgtctca
ccaaatagagaatatcaataaagagacaaaaattataaaaaataaancaaatagaaattctggagttgaa
aagtacaataactgaaataaaaagttcactagaggggtacaacagcagatttgagcwggcagaagaaaga
atcagcgaacttaaagataggtcaatcgagattattcagtctgaggaacaaagaaaaaagaatgaagaaa
aatgaasagagcctcagagacctgtgggacaccatcaagcgtaccaatatatgcataatgggaatcccag
aaggagaagagagaaarkggcagaaagaatatttaaagraatagtggccgaaaatttcccaaatttgatg
aaaaacatywayctwcayatccaagaagctcaataamctccaagtaggataaactcaaagagatccacat
ttasatgcatcatagtcaaactgctgaaaaa
>L1MCA_5   Primate L1MCA_5 LINE1 repetitive element - a consensus.
gaaagaaatgaaggaaccattaaaaaaatataataaagacttctggtttccagttcagcatgtaaggagc
ttagaagtcgccactccatcctaacaacaagtaaaaagctgaacaaactgaaaaatcaacaactcttctt
agatccatcagagaagtgaggtcacagggcaaaccactgcccccaaaattggagagacagacaggtgaat
acagagaatcacaacttaccagagcagaaacccacaagcagaaaccttccacaggaaccagtgccagggt
aggaaaacctgaactgtaattgatraattgctggaggctcagtgtggacaagtctgagagtgagttaaaa
actccagggggacccagtcatagggggggccccccacacttttgtgagttttacctccaggagctctacc
aggttctcacagtgaatatcagagaaaaatccccttgtgcttcyngcagggggaggggaaaaggaaccat
tttgaaatatgccagagcattctgttcttcttaacaaggcctgccctcaggagaaactattttaccagag
cctaacctgctggggttttatcagagcctaactgacctgggggaagggaaatacccaactccagctccct
ctagccttccacatgggggaagggaaatacccaactccagcccactctagccatcctgtcccacctaaag
ggggagaaaaaaactgagaagcacttgtgaagttcacagtccagaggcacaggctcactaaaagactgag
acctaatcataggactatagaatgcttcccctccccccmccaacacacagccacacaccttaccaccaca
ttaactaaaggcctatttacagcagttccttttacccagtacatcatgtctagctttcaacaaaaaatta
caaggcatactaaaaggcaaaaanaaaaacaaaaaaaaacaaaaacacagtttgaagagacagagcaagc
atcagaaccagactcagatatggcagngatgttggaattatcagactaggaatttaaaacaactatgatt
aatatgctaagggctctaatggaaaaagtagacaacatgcaagaacagatgggtaatgtaagcagagaga
tggaaattctaagaaagaatcaaaaaaaatgcagagagatggaaattctaagaatcaaaaagaaatgcta
garatcaaaaacacttgtaacagaaatgaagaatgcctttgatgggctcattagtagactggacatggct
gaggaaagaatctctgagcttgaggatatgtcaatagaaacttccaaaactgaaaagcaaagagaaaaaa
gactgaaaaaaaaaagaacagaaatatccaagaactgtgggacaactacaaaaggtgtaacatatatnta
atgggaataccagaaggagaagaagaaagagagaaaggaacagaagaaatatttgaagcaataatgactg
agaatttccccaaattaatgtcagacaccaaaccacagatccaggaagctcagagaacaccaagcaggat
aaataccaaaaaaaaaaaacaaacaaaaactacacctaggcatatcatattcaaactacagaaaaamaaa
raaaaaattcaaagataaagaaaaaaatcttgaaagaagccagaggaaaaaacaccttacctatagagga
gcaaagataagaattacatctgacttctcctcagaaaccatgcaagcaagaagagagtggagtggagtga
aatatttaaagtgttgagagaaaaaaacnaaccaacctagaattctgtaccctgtaaaattatccttcaa
aagtgaaggagaaataaagactttctcagacaaaaattaaaaaaaaccccaccaacctagaattctgtac
cctgtgaaattatccttcaaaagtgaaggagaaataaagactttctcaaacaaaaattgagggaatttgt
tgccagtagacctgccttgcaagaaatgttaaaagaagttcttcagagagaaggaaaatgatataggtca
gaaacttagatctacataaagaaaggaagagcattagagaaggaataagtgaaggtaaaataaaaacttt
tatttttcttattcttaattgatctaacagataacagtttgttcaaaataataatagcaacaatgtattt
aattatgtatgcttatgtatatatgtgtgatatatatatatgcttatatatgcttatgtataagtgaaat
gaatgacagcaatgatacaagggataggagggaggaattaggattattttgttattataaggtacttgca
ctacctrtgaagtggtatagtgttatttgaaagtggacttggattagttgtaaatgtatattgcaaactc
tagggcaaccactaaaaaaagttaaaaaaaaaaaaagaagtataactgatatgctaagaaaggagagaaa
atggaatcatataaaatgctcaattaaaaccacaaaaggcagaaaaagagtggaagacaaaaataggaac
aaagaacaagggcaacaaatagaaaacagtaacaaatatggtagatattaatccaactatatcaataatc
actttaaatatcaatggtctaaatanaccaattaaaagacagagattgtcagagtgg
>L1MCB_5   Primate L1MCB_5 LINE1 repetitive element - a consensus.
tgacatgtaangagcttggaagttggcactcccttcaacaacaacaaaaagntgaacaaacagaaaaatc
aatgacttttcttagatccataagagaagtgaggtcacagggcaaactgtcancctgaaatctggagaga
caggcgcatgcagagaatcacagcagagctctgctttcctgaagcagaagcctctgggagcacaagctgg
taggaaaacttaaatggtaattttggcaaattgctagaggctgagtgtggactagtttgagagtaagaaa
ttctcggnggcccagtctaggggaacctccacactttcgtgggctttacctccaggagtcccactagttt
ctcacagtgaagatccgagaaanttcgcttcacggctctggcagggggaggggaaaagcaatcattktga
aatacgcccagagtattctccgtaacaaactcttgccctacaggagaaaatactttgccagagccttatc
ctagctttagggaagggtaatcacccaactccagccccctctagccttcctgtctcacctaaagggagaa
aaaaagctaagaaacacttgtgaaggtcacagcccagggactcaggcccactaaaagactgagatttaat
cataggattatagaacgtttcccttccccmataccttaccaccacatcaacagggctccagtataataac
aatggattacagctgaaagaactgcaaaacmcagactctatttaagaaggagctnctagggaaacccaaa
gacaggagaggagacaaaaacaaggacaccggagtraagtttagcctctgacacctacagctacagcaaa
cagtaaacacagtctaactcttagccagataaacataaaacctcacattaaaggcctatttacttcagtt
ccttttacccagtacatcatgtccggctttcaacaaaaaattacaaggcatactaaaaggcaaaaaaaaa
aaacacagtttgaagagacagagcaagcatcagaaccagactcagatatgacagggatgttggaattatc
agactgggaatttaaaataactatgattaatacgctaagggctctaatggaaaaagtggacaacatgcaa
gaacagatgagtaatgtaagcagagagatggaaactctaagagaagaatcaaaagaaaacgctagaaatc
aaaacat
>L1MEA_5   Primate L1MEA_5 LINE1 repetitive element - a consensus.
cagacttccgattccggtaatggtggagtaagcccctaccggaccaaccctcccgcagaaaacaactata
aaacctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaacaaaagcaggcagaaactg
gaggggagtcgacacttggaagaagggagcwgcacggagtgagttcccatttctgtggcttttagcctga
gagcaggccgcagttggtgcggcgtacagatggctaaaacwtcagtagaaaacccgcggtctttctggcc
tggagaaccagagaantgaatctagggcaaccacagccactggaaagagtggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactcaaagcagcccagctaaagacaaaagatctgaactgagactggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagataactgcctactaaaacaaaagaaacaacac
tcattagagaaaaataacagaatccagaatctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmacataagaagaaacagraaaaatggaatncatccttaagagaaaagaaaatcaaatccg
accctgagatraaccagatgttggaattaacagacaaggattttaaagcarctattataactatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtaagtgaacttaaagatagatcaatagaagttatacaa
tgtgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgttcgacaatatca
aatggtcnaacatanatgtaattggaatcmcagaaggag
>L1MEC_5   L1MEC_5 LINE1 repetitive element - a consensus.
aatgtnttaaaaaattcacttaaaatataataggagacttctgcttctggccaagatggagtaacaggga
ccggatttaccctcctacctgaaacaactaaaaaacagacaaaatatatgaaacaatagttttcaagaca
ctggacatcaggcaacgaaggacagtgatccctgagagatgggaaacaaatgaggtgagccctatgattg
ccccagcttactgccttgagagagtttccaggctgcagtgcagrgagggggaacccaggcagagcccagc
agactccctgagttgaggagacagagctgagagtccagggagaccaaggntagctagagttcataggaca
gagtaccagagaggagagagctgcacagagagagaactctagagattctgcagagggtcccccttgagta
ttcagcagagtactgatcagcacatgcatgtgaggaaactacctgaggccagggaaagaaccacccaaaa
ggamaaaaaggattagagggaacagtgcctggtactcacacagggctaggaatagtgcctgttcccacca
gccagactggaaaacctcataattcacagggcattgggtagagtactcagaagggtcttgcctcagtagt
ggggaataattagccctagactaaacactgctctggtcccacctaacaaatcttaaaagcaagacctgaa
agaatcaaactgtttccaagtaacttaactgtatcccagaacaaagctcaagaatatttataggaataca
aaaatatccagcacccaacaaggtaaaattcacaatgtctggcatccaataaaaaattaccaggcatgca
aagaagcaggaaaatattataacccataatgaggagaaaaatcaatcaattgaaactgacccagaactga
cacagaattgttagaattagaattagcagacaagganacattaaaacagttattataactgtattttata
tgttcaaaaagttaagtagagacatggaagatataaaaaagacccaaatcaaacttctagagagatgaaa
actacaatgtctgagatgaaaaatacactggatgggattaatagcagattaganancattgcagaagaaa
agattagtgaacttgaagacatagcaatagaaactatccaaaatgaaacacagagagaaaaaaaaattta
aaaaattaaaaagaaaagagcatcagtgagctgtgggacaacttcaagtagcctaatatatatgtaattg
gagtccccaaaggagaggagaaaagagaaagagagaaaaaatatttgaagaaataatggctaaaaatttt
ccaaattttgatgaaaactataaacccacagatccaagaagctcaacaaaccccaagcacaagaaacatg
aagaaaactacaccaaggcacatcataatcaaattgctcaaaaccagtgataaagagaaaaatcttaaaa
gcagccagagaaaaaaagacacattacatacagaggaacaaagataaggatgacagcagatttcttatya
gaaacaatgcaagcgagaagacagtggagcaacatctttaaagtactgaaagaaaaaaaaactntttatc
ttttgtcattacctagaattctataacnaagaaaaaaactgtcaacctagaattctatacccagcaaaaa
tatctttcaaaaataaaggtgaaataaagactttttcagatatacaaaagctgaaagaatttatcaccag
cagatctgcannactacaaaaaatgttaaaggaagtccttcaggcagaaggaaaatgataccagatggaa
atatggatctacacaaaggaatgaagagcaccagaaatggtaactacatgggtaaatatataaaattttt
tttttttattatttaaaatctctttaaaagataattgactgtttaaancaaaaataataacaatgtattg
tggggtttataacatatgtaaawaaaatgtatgacaacaatngcacaaaggctaggaggggagaaatgga
agtatactgttgtaaggttcttatactatatgtgaagtggtataatatcacttgaaggtagactgtgata
anttaaagatgtatactataaaccctaaagcaaccactaaaataacaaaacaaagagttataactaataa
gccaacaaaggagataanatagaatcataaaaaatattcaattaatccaaaanaaggcagaaaaaaaaaa
aagraaaaaagaacagataggacaaatagaaaacaaatagcaagangatagatttaaacccaaccatatc
aataatcacattaaatataaatggtctaaacaycccaattaaaaggcagagattgtcagattggataaaa
aancaagactcaactatatgctgcctacnagaaatacactttaaatataaagacacaaataggttaaaag
taaaaggatggaaaaagatatatcatncgaaagaataccgccaagagncaaaaaaggtcattttataatg
ataaagg
>L1ME_ORF2   Primate L1ME LINE1 repetitive element - a consensus.
atggcagacntaaancctaacatatcaatrmttacattaaatgtaaatggattaaacactccaatcaaaa
gatacagattgtcagagtggataaaaaaacaacacccaacaatatacwgcctatmagagacacaccttaa
atataaagacacasataggttgaaartaaaagaatggaaaaagatataccatgcaaatwgtaaccaagag
aaagccggagtggctatattaatatcagacaaagtagactttaaaccaagaaatattactagagataaag
agggacatttcataatgataaaagggtcaatctatcagaaagacataacaatcctaaatatatatgcacc
caanatcagagcaccaaaatacataaagcaaatactaatagaactgaaaagagaaatagacaaatccaca
ataatagttggagacttcaataccccactgtcagtaattgatagatcaactagacagaaaatcaataagg
atatagaagacttgaacaacactatcaaccaactggacctaattgacatattatagaacactccacccaa
caacagcagaatacacattcttytcaagtgcacatggaacattcaccaagatagaccatatgctrggcca
taaaacaagtctcaataaatttaaaaaaattgaaatyatacaaagtatgttctctgaccacaatggaata
aaawtagaaatcaataacaaaaagatactctggaaaatncacaaatacttggaaattaaacaacatactt
ctaaataactcatgggtcaaagaagaaatcaaaagagaaattaaaaaatattttgaaataaatgaaaatg
aaaayacaacatatcaaaaatttatgggatgcagctaaagcagtgcttagagggaaatttatagcattaa
atgcctatattaaaaaagaagaaagatctcaaatcaataacctaagtttccaccttaagaaactagaaaa
agaagagcaaattaaacccaaagtaagcagaagaaaggaaataataaagattagagcagaaataaatgaa
atagaaaacagaaaaacaatagaaaaaatcaataaaaccaaaagttggttctttgaaaagataaaattga
caaacctttagctagactaaaaaaaagagagaagacacaaattactaatanatcagaaatgaaagaggag
ayattactacagatyctacagaaataaaaaggataataagagaatactatgaacaactttatgccaataa
atttgataacctagatgaaatggacaaattccttgaaacacacaaactaccaaaactgactcaagaagaa
atagaaaatctgaatagacctataactattaaagaaattgaatcagtaattaaaaaccttccaacaaaga
aaagtccaggaccagatggcttcactggtgaattctaccaaacatttaaagaattaataccaatcctact
caaactcttccaaaaaatagaagaggagggaatacttcctaactcattctatgaggccagcattaccctg
ataccaaaaccagacaaagacattacaagaaaagaaaactacagaccaatatccctgatgaacatagatg
caaaaatcctcaacaaaatactagcaaancaaatccaacagcacatgaaaaggattatacaccatgacca
agtgggatttatcccagggatgcaaggctggtttaacatayaaaaatcaaycaatgtgatwcactacaty
aacagrntaaaggagaaaaatcatatgatcatctcaatagatgcagaaaaagcatttgacaaaattcaac
atccattcatgataaaaactctcaataaactaggaatagaaaggaacttcctcaanataataaaggnmat
atatgacaaacctacagctaacatcatacttaatggtgaaaaactgaaagcwtttcccctaagatcagga
anaagacaaggatgtctactctcaccatttctattcaacattgtactggaagtcctagccagtgcaataa
ggcaagagaaagaaataaaaggcatacagattggaaaggaagaagtaaaactgtctttattkgcagatga
catgattttntatatagaaaatyctaaagaatccacaaaaaaacwactagaactaataaataaatttagc
aagntcncaggatacaaggtcaatatacaaaaatcaattgtatttctatatactagcaacgaacaatntg
aaaatgaaattaagaaaacaatwccatttacaatagcatcaaaaaaataaaatacttaggaataaattta
acaaaatayatrcaagacttgtacgctgaaaactacaaaacattgatgaaagaaattwaagaagacctaa
ataaatggagagatataccatgttcatggattggaagactcaatattgttaagatgkcaatactccccaa
attgatctatagattcaatacaatcccaatcaaaatcccaatggttttttttgtagaaattgacaarctg
attctaaaatttatatggaaatgcaaaggatccagaatagccaaaacaattttgagaaagaagaacaaag
ttggaggactcacattacctgatttcaaaacttactayaaagctacagtaatcaagacagtgtggtattg
gtataaggatagacatatagatcaatggaacagaatagagaacccagaaatagacccacacatatatggt
caaytaatttttgacaaaggtgccaaggcaattcaatggggaaagaatagtcttttcaacaaatggtgct
ggaacaactggatatccatatgcaaaaaaatgaasttmgacccctacctcacaccatatacaaaaattaa
ctcaaaatggatyatagacctaaatgtaaaanctaaaactataaaactyttagaagaaaacataggagaa
aatcttcgtgaccttgggytaggcaawgatttcttagatatgacacmaaaagcacaagcaacaaaaggaa
aaattgataaattggacttcatcaaaattaaaaacttctgctcttcaaaagacacyatcaagaaaatgaa
aagacaagccacagactgggagaaaatatttgcaaawcatatatctgacaaaggacttgtatccagaata
tataaagaactcttacaactcaataataaaaagacaaataacccaattaaaaaatgggcaaaggayttga
acagacatttcwccagagaagatatacaaatggccaataagcacatgaaaagatgctcaacatca
>MER89   Long terminal repeat from endogenous retrovirus.
tgagagactgaatatacaaacggacaatggccagaccatatatgaaaatagaactctgacccacaacctc
tgcagcaacctgcccaggaaaccaatccccttatctacaattacaacaaasaaggcagcctgctgtaagt
cagacttgcasaaagtcagattgctctctctagtaancagyccaggaagccaaacaacaacctctgcaac
aattggcccmaaatggccaggacttgatcaataactgmcagcttccctaatttttgtccctgcttccaac
ttaggaccaaccagagaaagcyaaatatgcwccccwaaccaatcacataggatgccctgcttctagttag
cccgcctmcagcttccccatgccaacaacctccaatcagggcatacctgaagtcttcccttttttccact
ataaagctttcccactcctctgcctgcctttgagtctctgccaaacgcaagtgatggtggctgactccct
tgctatagcaagctctgaataaatagcctttgcttgttctcatttggktggtcttcatttatttccaca
>MER90   Long terminal repeat from endogenous retrovirus.
tgagaaagagaaaagcagcccctgacatctgagagctggcctggtaccnwcagctaggccttggtgttgc
tgggagctggcctggcactcacagctaggccttggtgttctcctgttgaacataaacaatttcacagaat
atcaacatcagacaaggccactctgtgaccatgatggatcgagacaaaaacaagaccactccgtaatcat
gtctgaacacagacaaaaacatgaacattgtccaagccacaaaaatgaccaagcatccccctctcccggc
taatatgagtgactgctgcttctttaccaattacagctttagcctcgctctagtcttccctccttctaga
taagatttattaagatacccaatcacagaattactcccgcttcctgacagcatccaatccagagcaaagc
ttcgcttccttaaaccctcccccaaatcacctaacacaagcccaaatcctataataagtcctttctaaca
tcctcttactgagacgccccgtggttccccatggtgtgcgttctccctcgctgcarcgagcaataaaccc
aacttgttcaaccacaggtgtgttcctggtggtctttggctggagggcactgaca
>CHARLIE3   Primate CHARLIE3 repetitive element - a consensus.
caggggtccccaacccccgggccacggaccggtaccggtccgtggcctgttaggaaccgggctgcacagc
aggaggtgagcggcgggcgagtgagcgaagcttcatctgtakttacagccgctccccatcactcgcatta
ccgcctgagctccacctcctgtcagatcagcggtggcactagattctcataggagcgcgaaccctattgt
gaactgcgcatgcgagggatctaggttgcgcgctccttatgagaatctaatgcctgatgatctgaggtgg
agctgaggcggtgatgctagcgctggggagcggctgcaaatacagattaacattagcagagaggtttgac
tgcacagagaccataataaatcaattgcttgcagactcatatcaaaaccctatcagtgagtggcaagtga
caattaagctgcatctggtggcaggctttatagtggcaagtgagttgatgtacttcaattgtacagctgc
atctggtggcaggctttaagtcagaatccgacacttattttagtccgcgcgtggcctgctcattatttta
tttaccacttccatccgcgcctctttcccgcactgcgcacttgtctcagtcacagttttggtaagcccac
aagctaaccctagccaaaatgagtaaaaaacaaacgtcactggagagcttctttgaaaagggggaaagac
ccaatgatgagacagcagaagactctaagactgccaamaaaaanaangctgcatttaaaagaaaatacca
agagtcctacttaaattacgggttcattgcaacaggtgattcacattctccaagcccgctttgtataata
tgtggtgaccagctatccaacgaagccatgaaaccttcaaaactgcttcgccacatggagaccaagcacc
ctgcattagaagacaagcctttggagtttttcaaaagaaaaaantgtgaacacgaagaacagaagcaatt
attgaaggccaccacttcatcaaatgtgtctgcactgagagcatcattcttagtggctaaccacattgct
aaagctaagaagccctttactgttggtgaagagkktgatcctgcctgctgccaagssacatttgtcatga
actctwaggagasgmtgcmsttcaaawggtggcatgtgttcmtctttcakctttcagccaccacaacmag
acgaactggtgaaacagcagaggatattgaggcacagttgttagagaggatkaatgagtcaccgtggtat
gcaatccaggttgamaagtctaccagtgttaacaacaakgmaacaakgcttgcttttgtgkgatatattt
ttcaggaggatgcgcawgaggatatgttatgtgcacttttgttgccaaccaacaccacagctgcagaatt
attcaagtctttgaatgattacatatcaggaaaactgaattggtcattttgtgtcggtatatgcacagac
agagtggctgccatgactggatggctttctggtttcactactcgggtcaaagaggtcgcttctaaatgtg
agtctacacactgcgtcatccatagagaaatgctggctagctggaaaatgtcacctgaacttagcmacgt
tttgcaggatgtsmttaaaattatcaaccacattwaagtacatgcccttaactcacatctgttcgcgcag
ctctgtgaggagatggacgcagngcacacacgtcttctcttatacacagaagtgagatggctttctaaag
gtagatcactggccagagtttttgagttacgagagccgctccagagatttcttttagaaaaacagtcacc
actggcagcacatttcagtgacatagaatgggtcgcaaaacttgcttacttgtgtgacatattcaacctg
ctcaacgaactcaatctgtcacttcaggggagaatgacaactgtgttcaagtcggcagataaagtggctg
cattcaaagccaaactggaattatgggggcgacgagtgaacattgggatttctgacatgtttcaaacatt
agcagagattttgaaagagactgagccagggccttctttctcccagctggtgcatgatcacctatctcag
ctttcaaaagagtttgagcattacttcccaaccacaaaggaccccagaactgggaaggaatggatccgcg
acccatttgtgaataagccagstgaatcgactttgtccgtgctagaagaggatcaactgcttgagactgc
aaatgacggtggccttaaaagtatgtttgagacaacttcaaatctccatacattctggattaaagtcaaa
gcggaatatcctgagattgccacgaaagcactgaaaagcctgcttccatttccagcatcctatctttgtg
aagcagggttttctgcagtgacagcaaccaaaacgagattacggagtagactggacataagcaacacact
tcgggtgtcgctgtctcccatcacccccagatgggaccgtctagttgcaggaaaacaagctcagggctcc
cactgattctacattatggtgagttgtrtaattatttcattatatattacaatgtaataataatagaaat
aaagtgcacaataaatgtaatgcacttgaatcatcccgaaaccatcccccccccctggtccgtggaaaaa
ttgtcttccacgaaaccggtccctggtgccaaaaaggttggggaccactg
>MER91A   Primate MER91A repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaagggcgcctggccgagggagcgagtgggg
gctgaaatccagcccgtgctccgctcgccaagccgtgmgtcctggtgtggggctgcgtctacctagagga
aggggcgcctttttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>MER91B   MER91B repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
catcacagatttgtataatgacaattttccaacagatggcagtaaagtgtcttgaggaaggggcgccttt
ttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>MER91C   Primate MER91C repetitive element - a consensus.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
tctatgatgtgaatggcgccccctagagttgtgcagtgcacaacctgcacaactgtacatggcagccctg

>HARLEQUIN   MER57I, MER41I - a consensus.
[encoded data, 6958 characters]
ctcccactaatgagtgagattctcaaagggggggaa
>CHESHIRE   Autonomous DNA transposon; hAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtactgcccgtaaact
aagaatggtttttacatttttaaatggttggaagaaaaatcaaaagaagartattttgtgacatgtgaaa
attatatgaaattcaaatttcagtgtccataaataaagttttattggaacacagccacgcccattcgttt
atatattgtctatggctgcttttgcgctacaacggcagagttgagtagttgcgacagagaccgtatggca
ytctcattgcctttgcactsctgtttctraactataaccagtgttttgagtgccatgcatattactgtac
tgtaacattttwttytattattaatgnatacycatcatgtcaaaacaagaaaagaagagaaaagtrgact
ttgaatgttrcacttttaaggcacaatggagtatggattattttgttatggcaaagcattttattatgca
atgacactatagctgtgctaaatacaatatacattgacattaccagactaagcactcatcacartattcc
caaatcacaggaaagcaatngtcagaaaaattagaaaatttaaaacagaatatctcatcacagcagaatt
tcttcacaaaawtaaaaaatnaaaatgaggctgnaaccaaagtaagtttctgagtggctcatttgttagc
caaggaaggaagtcatttaccaatngtnaattaattaaatcatgttgattgcagcaggcatagaaatgtg
tctagagaaaataaacttaaaactattagccttttgataagaagagttgcttaaagagttgaggacatca
ataatcaattaaaaaggcaaatgrttttgagtggttttccttggctcttgatgagttgacaggtgttact
gatactgctcagttgtttatttgaggagtcaatgctgagtttgaagtgctgaatagccttaatgaatagt
ctgtgtggaataattgcagacaagaatatttcaaaaagttgagaaaacactaattyagtacaacctgaag
gaagtggaatctgctaagatgtgttaaaactgatggtggtaaaantatgtgtggagcagaaaaaagctta
gttggacaaataaagctgtgaaaatgtaagntgtttaaagyctatggttatttattttattcatcagcaa
gtactttgtagaaaatatttgaatctatcatgtgatattgaaccagtagtgtcaacatttgctcttgtgg
acttaaccattgtcagttctntaaatttttgtcagaaatagaagctgaatatcctgacttgccctgctat
acagyagtttgatggcttagnagtgctaaagctttattgntattttttgagctynggactgagattgaaa
tttttctgaatgagaagaactrctctcaaactrtttatcaaacactgagtggctttggaaattagctttt
gctgcagatttgataatatttcttaataaattcaacctaaaattacaaggcaaaacagcacttatattga
aacttatactgttgtaaagtcatttcaatgrcaacaactattgtttgaatcacaagtaatgtcaagctgc
tttatatacttcccatgctatcaaaagttaaaacaaagaagtaagatctccattcccacacaatttgtag
cagatatattttccaaactcaaactacagttccagcagcattttttggaccttgatgcaagtgcaaagga
aatwtccatttaactgtgcaattgagaagcttcctacctaaccttcaattggaatgattaatctgcaagt
aatgacatgcaaatatcaagagaaaattctataaatgccttccaagcaatgaatatgctcaattnaaatc
atatgctcgtgattgatatcantatttggcaatacctatcctgcgttgaaaataaaacattttcaaacat
gaaatrtgttgcattacagattagcatttnaacagatgaacatttgcaatcrattttgatgatagggaac
actaactttgaaccccaattaagcaaaatgttatcccwaaaaagaattccattcttctcattagtagacc
tgtattacaaaaaattgtactcaattattattwttattatattttgaatttcatcaataaaaattgtgga
attttttctcttgttatataagtacctacataatatccttgattttgcctcttggcccgcaaagcctaaa
atatttactatctggccctttacagaaaaagtttgccgacccctg
>GOLEM_A   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataataccgtatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattg
cctacagtattcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatag
cctaggtgtgtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaat
tgcctaatgacgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>GOLEM_B   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagnctc
aggcaggtccttcaggagatattccagaagaargcatcgttatcataggagatgacagctccatgcatgt
tattgcccctgaagaccttccagtgggacaaaatgtggaggcggaagacagtgatattratgatcctgac
cctgtgtaggcctaggctaatgtgtgtgtttgtgtcttagtttttaacaaaaatnttttaaaaaataaaa
aaatwaaaaatttwwaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtaca
gctgtacaatgtgtttgtgttttaagctaagtgttattacaaaagagtcaaaagttaaaaatgcaaaagt
ttataaagtaaaaaagttacagtaagctatggttaatttattgctgaaaaarwwwwwwwwwwwwwataaa
wttagtatagcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcac
attcactcaccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaag
tgcyctatacaggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagat
acacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttgt
agcctaggagcaataggctataccayatagcctaggtgtgtagtaggctataccatctaggtttgtgtaa
gtacactctatgatgttcgcacaacgaaattgcctaatgacgcatttctcagaacgtatccccgtcgtta
agcgacgcatgactg
>LTR34   MER4I-group; a consensus sequence.
tgtaaagaaaaataaaaaatctcaggacccccnnncyccntaaactccttatgcccggaggccgagtcat
tgcaacaccctcttccaaatgaatagctgttactagcatcatgcatcagccagatccccaaggaaaggta
aaaggcctcaggcatctgcaaaagactgcccccacagatcattcataagtaaattctttgctggcctccc
ataaacaaggacatgccaattgtaactttaggtctgcaacctaagtctagctcctaaaactaaagtctgt
tcgattccacactgataatgtcaattacaagcttatcttcccaggtgcagaacaaagacaaggtgagatc
agtcatttcctccacctacccagagacgtctgcataattgactcttcctttactccctttttctcttcaa
acattcaccttatcttatgtaaaatatagatttactgggcactaactaaagtctcacaggaatgtaarcc
atttgccttaccgcctacctgcccctcttcctacatgccttcccycactttaaggaaatgtataaatact
aaacctcctgaaaacctcttcagaaaaagcagccacagatgtgtctgtggctcgcgtttttcccggacat
gccctaaagctggcttaataaacctcgattgattgagacwtwtgcctcagtcactcattttggttgtca
>LTR35   MER4I-group; a consensus sequence.
tgagacagagtagggatggggcttggyttcagctcacccccactrgagcattctttcatgcattcccact
gatcacaaaacccacaccactacctcactganactatayccgctawymkksrkrywywrrwmatasmmak
wmwatawwswtyytttkkksmyyycwnanntttaaccatgccttttacttaaagaattccaggaactggc
cttaggagatcyaaacatcgaaccaaggttgcagagtgtcccacctcgggaaggaatgctgaacaattga
tttacagccttgttgccgctggccagaccaccaggtggcccattactcaagataaccatcgcaaccagat
aatgctgacctgcataccctaccytcacgtgctttgcccagcccagcctgcataccctacccctgatgtc
aattcccgcgctttgcctaataaaaaaatccctaccggctcttttcggggaatcagctcarggaattctc
kctctctcttctgctgtctcccttgtgcycragcataagctccaatraagccttgtctgggaaaactgct
tggycccgtgttaatttcyattacatggrgagcccaggaacctgtggtcnntaaca
>LTR36   Putative long terminal repeat of LTR-retrotransposon; MER4I-group.
tgtaaccaagtacccccatttttctaagaaaaagagaatgagttttattatttttttttctyttttctcc
tttttcccctgttccccacttcctacttagccctttagaaatgcaattataaccttttacctccccttca
ccagacactccctacagggcaagttcatctaactatgtgcttagaagctccagagcggaactctctccca
ccaggagattgcctcgagagataacagtcratttacaacccaaagtatgcccgctacgaaactctctccc
acctggagagttttggccacytttacaacctagttctgcccacgaaggcgccagcagtcaccagctcaac
cgcctggtagataaggcaccgaagcaagtcacgtagacccccacctgctgcttcctcccctgcatgccat
tcatgccaagcccccttttaaaagyscctgctttctgctccaaaagcgaagcggtacccttaaggcagga
agcctgtacttcttccccctaagctagctttggaataaaaagtcactttctttataccagacctcgctct
tgttaattggactctgcaagcggtgagcaactgaacctgcgtttcagttaca
>MLT2A2   Interspersed repeat MLT2A2 - a consensus.
tgtgatggttaatattgagtgtcaacttgattggattgaaggatgcaaagtattgttcctgggtgtgtct
gtgagggtgttgccaaaggagattaacatttgagtcagtggactgggagaggcagacccaccctcaatct
gggtgggcaccatctaatcagctgccagcacggctagaataaagcaggcagaagaatgtggaaggagcag
actkgctgagtcttctggccttcatctttctcccgtgctggatgcttcctgccctcgaacatcagactcc
aagttcttcagcttttggactcttggacttacaccagtggtttgccaggggctctcaggcctttggccac
agactgaaggctgcactgtyggcttccctacttttgaggttttgggactcagactggcttccttgctcct
cagcttgcagacggcctattgtgggacttcaccttgtgatcgtgtgagtcaatactccttaataaactcc
cyttcatatatacatctatcctattagttctgtccctctagagaaccctgactaataca
>HAL1   HAL1 repetitive element - a consensus sequence.
gacttccggttaaagatggcggattgaacacacgcatctanttttgctccctcccgaaaccccactaaaa
tnacagtaaaggaattttttaanaaaggcataaacccacaaggacaaagagaacaggagaggagacaaca
gcaacaaaattttggaagctggaaagcagatggacaagtggtaactgacttagcagacccgagaaagctg
aatcctaagccagcagtggggaaagccgagaancaacccaatttacaccgcagaatccccaaaaggctca
ggaattggcggcaccaggtacctctggaagtgggggtgaaggtgaggctaaaaacagggaggattggttg
aaagtctgtttaagaagcagttagacccccagattccctcccccactctatngcagccaggcgactgctc
ctcccccaccctagcagaagactggaggtttattctctggagagggtaaaacagagggtctctggactgg
gggacaccaggcacagttgagggcagaggggtaccgtactgaaaacagggggattaagtgaaagtttaca
tactgaatgncgagagacccccagccctcttcccccactcggctcccagaacgctggcagccaggcctat
accctccaggcaggagattggaagagtcttctctggggaatctgaccagcccaagaggaaagacctaaag
atactgacattaggggttccccaagcaaaacagcccagccagatcaccctacagtgaagcccacagtcga
caagccccacccacgcgcncagagcttccaatcagctttttagtgcctcactcttaaatatgagcagaca
gccaaggatcaccagacatttgaggaaagcctctaacatgaaagacagagaccaaaacaaacagaaaaan
gcaacttggaggaaacagaagantatgcagagaggagaagaaaacttcaaaaaaactatcattaatatcc
tcagagagataagagaagatattgcatccatgaaacaagaacaggatgctataaaaaaggaacattcaga
gaacaaaaagaagctcttggaaattaaaaatatgatagcagaaatgaaaaactcaatagaagggttggaa
gataaagttgaggaaatntcccagaaagtagaacaaaaagacaaagagatggaaaataggagagaaaaga
taaaaaaattagaggaccagtccaggaggtccaatatccgantaataggagttccagaaagagagaacag
agaaaangatggaagagaaattatcaaagaaataatncaagaaaatttcccagaactgaaggacatgagt
ttccagattgaaagggcccaccgagtgcccagcacaatgaatgaaaaaaatagacccacaccaaggcaca
tcattgtgaaatttcagaacactggggataaagagaagatcctaaaagcttccagagagaaaaaacaggt
cacatacaaaggatcaggaatcagaatggcatcggacttctcaacagcaacactggaagctagaagacaa
tggagcaatgccttcaaaattctgagggaaaatgatttccaacctagaattctatacccagccaaactat
caatcaagtgtgagggtagaataaagacattttcagacatgcaaggtctcaaaaaatttacctcccatgc
accctttctcaggaagctactggaggatgtgctccaccaaaacgagggagtaaaccaagaaagaggaaga
catgggatccaggaaacaggggatccaacacaggagagaggtgaagggaattcccaggatgatggtgaag
ggaagtcccaggatgacagctgtgcancaggcctagagagcaaccagtccagattggagcaggaggacag
aaggctccaggagagatntctccaagaaaatgaaactgatagantacctgatgtgtttgaacatattgag
aggagatttatacaattggcggagagtttggggatgaattagtgataagtacatagaaaactaagcaaat
gaaaagcgagacaattattaactccagggaaaacaaaaagttgtacaagaaaggaaangtaatcatagta
cactacatggctcagctgtgaataatatttacatagtcataataatgtaaacactgaatattgatttaac
caaaattatgatataactatattgggaggatggggggatgggaagtgtgtgtgtgntgagggggaggtgt
gaaagaagagctaaatcctcatcttccatagtaggaagtcaacagataatgcctaaaattgaaaaatcaa
gaaatagcaatataagcatgttatttagaaatatggaggtaaataccagaagaaacagctaaaagagttg
aaagtggttgcctctggggagggagtgaagatggaagagggnagggatggggactgcttttcgtnataag
ccttgtagnactatttgactttttaaactatgtgcatgtatnactttgataaaaataaaa
>MER66I   Primate MER66I repetitive element - a consensus.
[encoded data, 6745 characters]
ggagtatctaatctctgaggggggaa
>LTR37A   Primate LTR37A repetitive element - a consensus.
tgtagggaaaaattgtgcttcaatggaaaactatgcattgtctagagcacacccttccgggttatctgat
tctagctctgtcattgtctttgagctattttacaactctgtaarttgtagataactgatagcaatgcaaa
ataattcttgtctataganatgcaaataaattntgtccggtrgaggttcaattgacttccttcccccact
gtggaaaaagccagttttgcntcyatttgcaaattcatttcaatattcctgattncctataaatgtgtst
gttctttgaattctcctttgaaccggttrtaacatcttactggttccctcattaattaatgagttaaata
aaatctttaacacgtgttcattttatatytgtatgagagtcatgattttaccttttttgaaaattatcct
ttaaca
>LTR37B   Primate LTR37B repetitive element - a consensus.
tgttaaagaaaaattatccmaaacttggaaataaggcaaaaagatgacwgcatgtcctttcaatgtcata
ctggagcattgtctaataggctcactcaaggattatttaattatctaggggaatgtacctntgttgactt
tgctatttactatttgattagggcccagatactatgaagttacatgttaacttgtagatttctgtccagt
agaaaagataaccycaaaggttatagttttattgccctgtaggatattaaccagttttgtatctaactta
gcaatcttattccarcattcttctttactgaatgcctataaatacctagtttctcaaatgctctttgaac
cagttttaccatcttactggttccctcattaatgagttaaataaaatctttgacacgtgttcattctata
tttgtatgagagtcatgtttttaactttttgaaaattatactttgaca
>CHARLIE5   Primate CHARLIE5 repetitive element - a consensus.
ctgcgctgtccaatacggtagccactagccacatgtggctattgagcacttgaaatgtggctagtgcgac
tgaggaactgaattttnaattttatttaattttaaatttaaattttaaaatggaagcagtataaaatatt
tttccattaaacacaactttattgttttggtaggactacatttcactttaaccattgcatcgcataatat
agatattgctgtattgtagtgcacgtgtcgggcgcgtgcgttgtttctagtattacacgtaaacacatca
ctgatctagtcggtgtcgacggattgattcagtttaaatgatttttttctatgcancgatgtaacattgt
aatgtgtttatttgaatattttatgcagacagcacgagttacagtgatacctatgtaaatcataattggt
aattaaattgaaatacttattattttaattataatataattaaattatttttctagttaaaaataagtat
ggacaaattttnaaatttaaaatgaaggcatactactgatacagaattgagtggagatgcagaagctagt
actatgaccggaacagtaaagaaaaaaaaagagactggaagaaggtatgttacaaatttcacgatgaatg
gcaattgcaatttgctgcggcagagcaaaacgaaaaagctgtttgttgtgtaaaaaatnttaaagataat
aaagtgganaatattaagagacattttcagcaaatacatagtgaatttgataagaagttttctctcaaca
gtcaaaaaagaatcaatgaaattagtcgcctgaaatcagaattaaatgtccaacaaaaatttttaaataa
tttttaacaggatctgagcttgtaactttggccagctataaaatggcttggattcttgcacaaaaaagaa
aaccatttttagatggagagatggtaaaagaaattatttcagttatggaaattttgttagaaaattatga
ggaaaagactaaaaatgatattttacaaaaagtgaaagatcttcaattaagccaccaaacaattgcccgt
agaatacaagacctttctaacaatatcaaagatcaattgattcaaaatttgaaaaactgcaagtactttt
ctttagctttagatgagtcgtgtgatatgagagacactgcccaattaatactttgggtacattttgtctc
aaaggacttccaaatttacaaagaaatgttgtcaattcgtggcctaaaaaatcgaactcatggcatagat
tttttaaactcttttacatctgtcaaagaagaatttcagttagatatgaaaaaattagtttctatcacga
cggatggtgctccagctatgttaggtcaaaaatctggatttattggaattttaaaacaagagactgatgt
ttcccttattgcttcgttccactgtatgatacatactgaaaatatttgtgctcagttttctgaagcagac
tctatgaaaagcgtcatggatacagttgttaaaatcgttcagtatatacatgcaaatgctgtgaatcacc
gccagtttatggaactgttgaaagaaatagaagacaatgaatttaatgatcttgtgttctttgccaatgc
tcattggttgagtcgtggaagagttttacaaagatttactgtactgttaactccaattcaagattttctt
gaaacaaaaggaatgcttgccaaatattcaataatcaaagacaaaaaatggcaatgtgatttacgttttc
tcaccgatatcacactgcatatgaacaagctaaatttgaagctccaaggaaaggaaaagcttatttgtga
cctagctagacaggtacaagaatttatgttgaaattgaaacttttcataatacaaatcaataataatgat
tttacacatttttctaacatgaatcaatatgcagaagattttaattgtaatcgacagcattatgtaaatt
ggctgcaaaaactacaagaaaaatttgaagaacgctttgttgatattgataaatttagagttgcttttca
atttatgcaatacccttttgaattcaatgttaataatactgagttgacacaagagttagtgaatttactt
aacttggacagacgtagttttgaaactgatatgcttttgcttcaaagtcaaatcaattcttctaaaaaag
atgaaccagttttgtcaatgtggatacgaatattaaaggaaaatgattttttgatactcgattcagttat
tggaaaacttttaagtatgtttggaacaacttgggtatgtgaatctactttttcaactgtaaattttatg
aaatctaaatacagatcaagtatttccgatgaaaatttagcgtccgaattgagatgtgctgtaagtgtaa
aatacacaccggatttcgaagacttagtacgaaaaaaagaatgtaaaatatctcattaataatttttata
ttgattacatgttgaaatgataatattttggatatattgggttaaataaaatatattattaaaattaatt
tcacctgtttctttttactttttttaatgtggctactagaaaatttaaaattacatatgtggctcgcatt
atatttctattggacagcgctg
>TIGGER5   Primate TIGGER5 repetitive element.
cagatggttcccaacttacgatttttcaactttacgatggtgcgaaagcgatacgcattcagtagaaacc
gtacttcgaatttctgatcttttcccaggctrgcgatatgcggtacaatactctgtcgcgatgctgggca
gcgrcagtgarccgcagytcccagtcagccgcgcgatcacgagggtaaacaaccrrtaytctacagtgta
ytrtrtgactggcgtttcttggacattgtgtttcgcgcttttgcatcctgtcatgtctacagtatgctca
tctatgcctcctgcttctggtgagaagaagaggaaggcaattactcttgagatgaaactcaagataatcg
ccctgcatgaagacggcaagggattaatggccattgcacaagagttgggactttcacgatccatgatcct
caaccatcttaaagaataagaagtgaatcagtgaggcagtgaaatcgtcagcattagttaaatccactgt
cacgaagaaaagagcttggctgattgataatatcgaaaaattacttgtcatgtggatgtaagaccagata
tcgaagggcatactacttactgatgatgccagctagggcaagaagtgtttttgattacactaaaagagtg
aatgaatgtgtcgatgatcctattatacacaagtgtttatggcaagtcataggtgattccagtgcttcaa
aaggcatcataattttcttaatgtgaaggtcagcagagagtcagcaagcgctgatattgaatgtgtcaaa
gcttttaggaagagctgtacacgataattgtggataataaatatttcccaggacaaatattttatgtaaa
taaaatagggttgctctggaagcaacctgtcaagaacttaaggcattcagactgtgtattgctgcttttg
ggtggaaatgttgcagggttcaaattaaagcttttcctaatttacaactcagggaacccaagaacactca
agaatgtgagcaagcattcgcttcttatttattatcaccataacaagacaccctggaggacctcagcatt
gttcgaagactggcttttgaactgttttcttccacaggcaagagaatattgtaagcaaaaaacgacttca
ttcaagattcttctgatcttagacagtgctccagggcacccacagcatataggtgacatgcattcttatg
gaaagttatgagtttgctgccaaacacaaccacactcaactcatggaccaaggcacaatagctgcattca
aagcacactatgccaggcatttgctccggctgttgaagtgaatgaatctggctgaatgctcctagagttc
tggaaaagttttaacattctaaatgctatccagaatatcactggagcatggaaagaagtcacacagcaat
gcatgaatggcatttggaaaaaagttttgaagacatgtgaacacattcaaaggccttagcaaggttctgc
tgttgatgaaacagtaacaagatactagtgcttggagaatagctagaattgatgaagaggatatttatta
acttcttggcattgaatctgaagagctttccaatgaggagataatcaaactggaggaagaaagaagttga
gaaagaggaagaagttatacctgaggcaccaagaaagttaacggcaaagaaactggcagagatatttgcc
actatcagcagtgccattcagaagttagaagaaagggatgtcattattcacaggagctgacacacagtac
aggatgctcttgcttgctacagagaaatatataatgaaaaggagaacaaactgtatagtccaaacctgat
gtcttcctgaagaacactatgcctgctaaaccattaacaagtatcgatgccccagtgccttctcccagct
actctcaggcctcatcagaagagaaattaatgaccctgttgcagtagcatccccatcatccagcaattaa
ttttagttcaatgcttcaaacattcttcaggcccagtatgcattcacctgtgtatgttacttaattgtga
gtacccatacaaccatactgtttytyactttcagtacagtattcartaaattacatgagatattcaacac
tttattataaaataggctttgtgttagatgattttgcccaactgtaggctaatgtaagtgttctgagcat
gtttaaggtaggctaggctaagctatgatgttcggtaggttaggtgtattaaatgcattttcgacttaca
atattttcaacttacgatgggtttatcgggatgtaaccccatcgtaagtcgaggagcatctg
>TIGGER5_A   transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttaytgaatactgtactgaaagtraraaacagtatggttgtatgggtacttgaagta
cggtttctactgaatgtgtatcgctttcgcaccatcgtaaagttgaaaaatcgtaagttggggaccatct
g
>TIGGER5_B   Non-autonomous DNA transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttactgaayayartacactgtagartayyggttgtttaccctcgtgatcgcgcggct
gactgggarctgcggytcactgycgctgcccagcatcgcgacagagtattgtaccgcatatcgcyagcct
gggaaaagatcagaaattcgaagtacggtttctactgaatgcgtatcgctttcgcaccatcgtaaagttg
aaaaatcgtaagttgggaaccatctg
>LTR38   MER4I-group; a consensus sequence.
tgtaaccgagtatcccagcctcaaaatgcattttaaaacttttttctttttcttttttgctttcagcctt
gaaacatactttgaaactctttgtttctccctttcccaccaggcacttccgtgaacagtgctcgcttatc
taattatgtgcttgcttagaaattccaggggccaattttgaaacaaaccaggcagagagacccagctgca
gaatcctcccgcttagggggagttatgaacagttagcccaccactaccgggctgaagtcaggatgatgca
aaccagacctccagacgggcgattactcaagatagccatcggaacaagacatgcagacctccaccctcct
gcaccactcccacatatttcccacaccttttccttcttaaaccccttcactcagcccaaaagtctgaaat
gtcttctttgaggcatgagcctggccatctcccatctgctagcatttgattaataaagctgctttccttt
caccacacctcgcttctcatgttttgagcttctgagcagcgagcagctggacttgagccagttaca
>LOOPER   Molecular fossils of autonomous DNA transposon - a consensus sequence.
ccttyagaayaycatcaggtcttgnannnnnttttatttttgagtttttahttgtaactatttdtaagga
tattttatgncntttattctttcaaagaacwrargaaanatgnctgaataaanctcantnnagctngtan
ttaannatagnntgaganatcttnatgancctattttttccattttgctatttyatcttnctaggaatta
tttcatcattactaatcaattatttctaactgtgctnwtataaaaagactaaaataataagaaaatggaa
gaatgataaaacctcctgggatgaaataaataaatcatcactatgacatcatccttcagttttcttactg
tgttgcccaaagtattgcattatctttcaagaaggtataaaagaagtctggagacaccatctttgtagtc
tttttttagctttcattgaacacagtcgagaattcagaatttttcattttctacccataatggcaaagag
aaaaaaattgacagaggaagacatttcacaattattagatgaatcagaagatgaatgcaaagagacagat
agcagcactctagactctaatgatgatggtgaaattgatcatataagtgaaatctcagactatgagtctt
cagatgacgatatcctagatgaattttctcaaactcaagaatcgacgagtgaacaatatatttctaagga
caaaaaggaaatatggtattctcatccagttagtcattcaacaggaaggacttcatcacgcaatattttg
cgacaagaacctggaccatcccattttgctaaaaggacatgtgacagtattctttcatcttttatgatgt
ttgtgcaccaaatttacttgatacagtttgtaagtggacaaatgctaaaggcaggtatgtttacaaaagg
taactggaaggaaatagatgaagagaaaaaaaaaatcattgaattgatcattctaattggtgtttataaa
tctaaaaatgaaaatgttttgcagttatggagcaaagaagatgtctctcttcaacaaaattatgagccct
caaaattttcaaaagtattacgttttgacgatgtaagtatggaagaaaagaccagaaataataataagct
agaacctattagagatgtatttgaaatctggaatcagtatttacaagatagatatgttccaggttcatgc
atgacagttgatgagcagttagttgcattcaaaggatattgcccatttcggatatatataccttcaaaac
caggaaaatacggaataaagaatggaattacaattttgggttataattcaaattaaaatttttaatgaag
tttttttacaattccttaattcttcttctgtaaattattcgtaaaatgacttaaaaataaaaaaataaaa
agagttcattggacccagatggtaaatggtgatgactgtttttccttggtgtaccgaggg
>HERVK22I   sequence of internal part.
[encoded data, 6887 characters]
actcttcaatcaacaaaacctgatgcaaaaaacagaaaagggggaga
>MER51I   a consensus sequence.
[encoded data, 7881 characters]
ctgcctcccataaagatttatggggatcacatctcwtyggggggaa
>MLT1I   Mammalian long terminal repeat (MLT1I subfamily) - a consensus.
tgtggtagtcattagtgctgttcaccaaatatttctagctctctnccttccgggcacatggtaggattgt
acttcctggcccccttgaagttaggtgtggccatgtgacttgctttggccaatgaaatgtgagcagaagt
gacgtgtgtcacttccgggcagaagctttaagagccagtgtgtgattcnccangttctctttccctctgc
cacggngaccagcaatgttccagatggnggctgctccgtcagcctgggtcccggagtgaggatgacatgg
agcagagccccagccgacccgcgatggacatgtagcatgagcaagaaataaacctttgttgttttaagcc
actgagatttgggggttgtttgttactgcagcataacctagcctatcctgactgataca
>LTR41   LTR from human endogenous retrovirus-like sequence.
tgtgccagttatcaatttattgcctctcagctccaaattcacccttattgcctgctctgtgaaaatggat
ctggaccctttaaatatttttcctttgccagctggcatgatgttaagctttgtcagtagagggcactgga
gagacattgcaggaggaaggggcttttcttcctggttcctgtgtgctgntgtgctwggcatgctcacttg
gcaggttcctgtagctcaggcytacagcttctccagtgcccagttcctgcagcgcacacagcttctctag
cacccggttcctgcagcatgtgcmccttctcaagcatgcagctctggcagtntaatcagcagtgtccagc
agcttcccccagcacccatcactcaggnggtttcacagtggggtgcctntggtgagatacctccctgtga
acagctttccctgacaccctagaggntggatttccnagaagttccacagggtrgatttccagcaagttct
gttagtgcagtaccacagtaacttctctgccatccagtaagccatagctgtgcctttgtccaacaagatc
tggatctcagccctggggggaaggttctctcctgggtgctctrtctcagccctaggggtagtggctgctc
cttatatctgctattcctatattctttagagttctctttacctcttastagttaattccctgttatagtt
aatatttatattaaacttttcctgttcaaattactgtgtggtttctstctcctgattggacccagacata
tag
>MER52A   Long terminal repeat from MER4I-group retroelement.
tgatggcagcggcggcccgtctggagtggccgctgccatgatgccggctgcagcgggggaggcgcggccg
gggctgcgcgctccatggagccagcgggagccgggaacaggcgggagccccgcccccttccgagttgggg
cgggagctccccgggtgcagctgcagccgcccaaacgcagacccaggcctccctgtgctcttgggggccg
ggagcaggcaggagccccaccctcccgggcacagctgcagccgcccagccgcggctscggacccaggcat
cyctgcgctctcgggggcctgggaaggcccccctgcccccacaggcttggaagtgcctgctcccactgca
gctggcctctccccgctcccggcgcccgctccgcaggctcagaagtgcctgctcccgctgcctggcctct
ccctgctccyggcgcccgctccgatttcggagcaaagttgyggccgagcccgggcgctgtcgcaacccgg
ccgggtgtgtgcacgctcggggcagcgctgacacgccagccccctgccgcctcggccccctccggacttt
gggcgccgacgagcatgggagggaggccgagggggggctgagggcagctcggcgckggcctgcaggcgcc
cctcggcacgaacagcctgggtgccatgaacggcagcaggaggcagacaggctcctgggcagaaaggggc
gggtccccggtgaaaccccaccttcaagccagggacggcctgaagcctgggggccgggctgccagttccg
ggtggagtccgcggmccggagtgagaacttrtggtgctttttctgggcccacccatggccgcccatggac
caatcagcacgcacttcctcccctctgargcccataaaaaccccggactcagccagactyagrcagaygw
ygggacgaccagctgcagagaggagctacccactccggggtctcctctctgctgagagctgcasagwcgw
cgggatgacctgcctgcagagaggagctacccactccagggtctcctctctgctgagagctgaacactcg
tcgggacgmcctgsctgcggaraggagctacccactgcgggtctcctgagagctgttctgtcgctcaata
aagctcctcttcgccttgctcaccctccacttgtccgcgtacctcattcttcctggacgtgggacaagaa
ctcgggacccaccgaatggcggggctgaaagagctgtaacacaaacagggctgaaacacgccccctgctc
accacgttgtgggcgacgagaaggagagaagagctgtggcccttcggggagcccagacctaggagctccc
cgagccagggctgtgacaccctctttggggctctgcggttcctggcgtctccaagcttctgggcgccacc
gcgttccccggtgccmrcwgtggaagctgcttgcggtacgcctggtccagccgcagccttgcacggagcc
ggcacctgtgccggcgcctggagctgcctgccccgccgcagccrgcgtgcctggctgtgcgcagtggccg
gaccccacgctcgcttgctcacacacccctcaccgctccgcgcctggctcgcccttggcaggcatgggat
ccaggccrgtagcgcgagcygagcgcagcctgccaggccgagtgggcggaatgagcccagcgggcccaag
caaaactcgggcaaaggcgccaccggccacagaggtttccggctggvraagcgacaccccaaggatcccg
tgaca
>MER52B   Long terminal repeat from MER4I-group retroelement.
tgatggcagcggcggcccgtctggagtggccgctgccatcatgccggctgcagcagggaggcgcggccgg
ggctgcacgctccatggagccagcgggagccggggacaagcgggagccccgccccttccgagttggggcg
ggagctccccgggtgcagctgcagccgcccaaaccgcagctgcagacccgggcctccctgtgctcttggg
ggccgggagcaggcaggagccccaccctcctgggtgcagctgcagccgcccaagccgcggctgcggaccc
aggcatcyctgcgctctkgggggsccaggaaggcccccctgcccccacaggcttggagccgcccgctccc
actgcagctggcctctccccgctcccggggcccgctccgcaggctcagaagtgcctgctcccactgcctg
gcttctccctgctgccggcacccgctccgatctcggagcaaagttggggccgagcccgggcgctgtcgca
gcccggccgggtgtgcacacgctcggggcagcgctgacacgccagccccctgccgcctcggccccctcca
gactttgggcgccgacgagcatgggagggaagccragggggggctgagggcagctcggcgctggcctgca
ggcgccccttggcacsaacagcctgggcgccatgaatggcagcaggaggcagacaggytcctgggcagaa
aggggcgggtccccggtgaggccccaccttcaggccagggagggcctgaaggctgggggccgggctgcca
gtcccgcggaccrgagtgggaacttgtggtgccttttctgggcccacccatggccgcccatggaccaatc
ggcacgcacttcctcccctctgaggcccataaaagccctgggctcagccagagcwgagcagacgacggga
cgaccagctgcagagaggagctacccactccggggtctcctctctgctgagagctgcasagwcgwcggga
tgacctgcctgcagagaggagctacccactccagggtctcctctctgctgagagctgaacactcgtcggg
acgmcctgsctgcggaraggagctacccactgcgggtctcctctgagctgttctatcgctcaataaagct
cctcttcatcttgctcaccctccacttgtctgtgtacctcattcttcctggacgcaggacaagaactcgg
gacccaccgaatggcggggctaaaagagctgtaacacaaacagggctgaaacatgccccttgctcgccac
gttgtgggcaaagagaaggagagaagagctgtggcccttcggggagcccagacctgggagctccccgagc
cagggctgtgactccctctttggggccctgcggttcctggcatctccaagcttccgggcgccaccgcgtt
ccccrgtgccagctgtggaagctgcttgcggtgcgcctggtccagccgcagccttgcagagagccggcac
ctgtgccggcgcctggagctgcccgccccgcwgcagccrgcgcacctgactgtgcacagtggccggaccc
cacgctcgctcacacacccctcaccgctccgcgcctgactcgcccttggcaggcatgggatccaggccgg
tagcgtgagcygagcgcagcctgccaggccgagtgggcggaacgagcccagcgggcccaagcaaaactcg
ggcaaaggcgccaccggccacagaggtttccggccagaaaagcgacaccccaaggatcccatgaca
>MER52C   sequence.
tgatggcagtggctgctgccatcacgctggctgcagcagggaggcgcggctggggctgcacactccatgg
agccggtgggagccccgccccttctgagttgggacgggagctccccgtgccactgcagccgcctaaaccg
cagctgcagacccaggcctcctgctccacggagcaggcaggagccccgccctcctgggcggggctacagc
cacccaaactgcggctgtggatccgagcctccctgtgctcttgggggagccgggagcaggcaggatctgc
cytcccgggtgcagctgcagctgccscacccgcggctgcagacctgggcctcycactccaggragcaggc
aggagccagggacaagcgggagccccgccccttccgagttggcagggcgggagctcccgggtgcagctgc
ggcctaccctcccaggcgcaggacctgggcgtctctgcagcctgcacccttggggggcccaggaaggacc
cwccccatccctgcaggctcaggggtgtctgctcccactgcctggcctctctctgctcctggcgcctgct
ctgatctcggagcggggttggggccaagcccyggggccatgaatggcagcgggaggcagacagattcctg
ggcggaagggggcgggtccccagtaaggccccaccttcaggccagggagggcctgaaggctgggggccgg
gctgccagtcccgcagaccagagtggggactcgtggtgcctcttccgggcccacccatggccgcccatgg
accaatcggcacacacttcctcccctctgaggtccataaaagccctgggctcagccagagcagggcagag
gatggccagaggacaaagrgggcagagagacaatgggacwggatgaccagctgcagagaggagctaccct
ctctgctgatagctggagaygatggracgaccagctgcagagatgaccagctgcagagaggagctaccct
ctctgctgagagcttcagagacctgcagagatgacttgcctgcagagaggagccaccctctccagggcct
cctctctgctgagagctgaacactcgatgggacgacctgcctacagagaggagctacccactcctctgag
ctgttctaacactaaataaagctcttcttcgtcttcttcacccttcacttgtctgcgtacctcattcttc
ctggacgcaggacaagaactcgggcaaaggcgccgcggccacagaggtttcccgccagaaaaatcgacac
cccaragatcccgtaaca
>MER94   MER94 is a non-autonomous DNA transposon - a consensus.
tagggtgaccatatgtcccggtttgcctgggacagtcctggtttatrcctgttgtcctggcgtaattatt
aatagcgccccctttcactctcaaaagtgtcccggtttggacgataaattatatggtcacccta
>CHARLIE6   Primate CHARLIE6 repetitive element is a hAT-like DNA transposon.
caaagtttctcaatttgggtttctacggaacctagagttccgcgagatgtcgctagggctccacgagaaa
ttgtgattgaaaaaaacncagtttttgaacttcgcataccgcgtgatgctggtgctcgcagtgatgggca
gtgaccgagcagccccgttagcaatttcattaggggtctttcagccctgtatggcagtgtgcagtaggac
tgtgctcatttggttgagtccattctcagtttttgatgcaagataggggaggctactgataantggtgag
cgctgtattgcacagaggggaggacggtaggctgatgacgtcagcttctcccctccaattacctccccca
acctccccttatacgccaccgactgacttangggagcgaacaagctctaccggtgtaatagaaaatcgga
gggaanttttcattctaaagaaggnatttttacgtgccacgactcagctgcccccctgccgctttgctgt
tgttataaacgttgcaaaacgtggattatgtaggttagaagtgaattgtattgtgaagtttttgtatttt
tgtgattttcttatttattatgcccttctgttttatattttattagcgtttgtgttttataaacatgtct
ganagtccagtgtggcgatttttgaagatgaggtgtgagatggaagaggagnattctaggcctaggccta
tggacaattctgataaggttagtgatgaagaattacaatcttctgagtcatttcactgcactagtgcaac
aagggacacaaanaaagtctatctttacaatgaaagctacttatcaatgggttttacatgggctggtaat
ccaagctgtcctattccattgtgcatcgtctgtgncaaacaacttanaaatgcagcaatagctccagcaa
aattgaaaagacacttaactacaaatcacagccatttgacaagtaaaggtgctgattattttaaacggct
attggaatctcaaaacaaacgaagtaaagcttttgttnaaaaagtcacattcagtgaaaaggctcaggaa
gcaagttatttagtagcagaacttattgcccagaaaaggaaaagtcacacagttggtgagaacctaataa
tgccagcatgtaaaattatagtgagtaaaatgctaggacaagatgcagtacgagaaattgaaaaggttcc
actctcaaacagtataataagtcgacgtattgatgacatgtcacatgatgctgaagaggttttgtgtaat
aaactgaaaaacnacagcttctctatccaggttgatgagtcaacagatttcaccaatanatgtcatgctg
tagcatttgtaagatttgtaaataatggtgaaattcaagaaaacnttttctgctgcaaagagctgcccaa
aacaagcaaaggccaagatatatttaatgttttgtcttcatatctggaaacaaaaggtctgtcttggagg
aactgtgttggcatctgcactgatggtgccccatcaatagttggctccatgagagattttacctcttntn
naaaaaaagaaaatcctgatgttgtcatcacaacacactgctttcttcacagagaggtgctggtgtcaaa
aactcttggagatgaaatgaaagttctgaatgatgctacaaaaatggttaactttattaaacaaagacca
gttcactcgagaatgtttnaaaaantgnatgaaaacctggacaaacagcacataaatctcctgctacata
cagaaatccggtggcttagcagaggaagagttctcaacagggtgtttgagctgaaaggtgaattgnagga
gtactttcaagaaaatagtaggccagattttgctgagtgctttgaagatgaagaatggctgcagaaacta
gcctacttagcagacatttttcatcacatgaaccagttgaacaagtctctgcaaggccctggagaaaatg
ttttgacttcaagtgacaagattcttggatttaaaaggaaactgaatctttggaaaaatcatgttgcaaa
aggaaatcttgaaatgtttccacngctgcttgggcttgagagtgaggaaggatatcagcaagtctcaagt
cttattgaaaaccacctggaagaactgcagaacaaaactgaacggtattttccctccctttcaacacaag
tgtatgactgggtgagggatcctttctctgaatcttctgctcagcctgagaacttgactttgagagaaga
ggaagaactttgtgagctgcagtctgatcatacactcaagatgagatttactgntctgcccctagacaag
ttctggatttctgtgaaagaagagtatcctgccattcataggaaaacagtgaacattttgctgcggtttt
caacttcttacatgtgtgagcaacagttttcttatttaacaagcatcaagagcaaggacagaaatngtct
catctcagttgaaaatgaaatcnntgtgtgcttatctcaagtttgacccagaattgagtatctgtgcagc
aaaaaaactaagcacaggtttcacgtgaagaantaacatatttttatttttagnttcaaaaatagcattt
taatgcatatataggcctataaaaaagatcangaaaccaacgcatgtgtataatanttttgtaactgcta
ggcctatatttgagcctgatcatgtcactcagwaagaaaatgttttttcaaagtcttgtataaaattttg
tcttaggctatatttttattcacattgctttggcttacggttttagtagctttactattcaacattgtca
ataaattttcatgttgtaataacattaattaaaatcaatttacaacctttatttaaattaaatctactga
gcntanctttaaaaaattaaatcccattttggcttaagccagttatttaacagaaatttattatgtttgc
cttatgagtttttaaaatttatgaaaagaaagaaattaatttcaagaaaggtaagctaagcttantacct
tacttttttcaagaaaggttggctaaaaagtcatttttagttttaaanaaggaaaaagntactcttgcac
acaccatgtaccacataccatacctcattagcatcttgtatagtagaaatttgtgataagactttnaggc
ctacttggataaagttttaaaaatcaagtaggaaatttattaaaaaaaaaaaactgaagtttcctttacc
tacactactgacttgcattagagttgatatcctttgtggggaggggnaaccacacaaaaagagnaggcta
ataagttggccaaaataagcagatccacagaaaaaaatcattctctactcaaaanagcattgacaattat
tattggattattatatctacaacttactgntcacgctaatataccatgagctgtagatataacatnttta
tgcaggggttccctgagacctgaaaattatttcaagggttcctccagggtaaaaagattgagaaaggctg

>LTR39   Primate LTR39 repetitive element - a consensus.
tgagacggagcagggaccccctcttaggggcctgcngggcactccccccccaagcatggaaataaaggaa
aatcttgagttccttcaagggaaattccaggcacctagctagccctgagaagtaaatgagcaacttgata
agcaagaaggtaatagtagcttaaaacaatagccaaggaagttagagtcacgrgatgtttggttccccta
tagaaactaaagataacatcttaacatatgtccctgagttgtttttcagaaacccggacccccaccaaat
ggaaaatgccatccgctggcacgtagacctcagataagggggaactgaggactgaactctgaccaccgtt
ctttgttctaaatttcttcctgaggggcctggaggaagtcacgcccacgagccagagctaacattctttt
ctgctgaccccaaatttttagacaaagcttcgcttccttaaccaatcgcaaatcagaaaatctttgaatc
yacctatgacctgtaagcccccgcttcaagatatcccgccyttttaggccaaaaccaatgtrtaacctcc
atgtattgatttacgattttgcctgtaacttctgctttcctgaaatttacccctgcctttaaaaaccctt
acctgtaagccatcggggaggtcgggtcttaagcgtkagctgcccgattctccttgcttggcgccctgca
aataaacgccttmctttctcccgctgcaaaatctcggtgtsgatgtttggttttactgcgccgggcgagc
ggaccccagttcggttcggtaaca
>LTR40A   Primate LTR40a repetitive element - a consensus.
tgttgggagacaattctccatgggtctctcgcatttctgcacgtcttgtgagcagaggcactgactgcct
ttgttctggactatcttttcaaggatgtttgtatagcgaacagccttggaagatagagatagtgtctccc
tctggagcaaagggcaggtttgcttactagccttgnaarataaagataatgtctccctccggggcaaagg
gcaggcatgcttactgcccattataaaagattngggtttcctaagctcggggttcctcwsctgtracgca
aacccactgcgtgtgcagnantcatctggsccccttcgcatcgccctcgtgggacttgggggncaagggg
aactgacgcaaacatgatgctcatgctgcctgctgtgctgtgartaataaagtcctttgtctctgaccca
ggagtctcgtgtcttctgccagcatccatgaaactgtggcaggctaacttgttagcttgcaagtagggta
aaatctcagacccttcacagttcttgaca
>LTR40B   Primate LTR40B repetitive element - a consensus.
tgttgggagacaattctccatgggtctctcgcgtttctgcacgtcttgcgagcagagcactgactgcctt
tttttctggactatcttttcaaggatgtttgtatagcgaacaaccttggaagatagagataatgtctccc
tctggagcaaagggcaggcttgcttactgcccattataaaagattcgggttccctaagctcagggttcct
ctcctgtaacgcaacccactgcgtgcgcagcatccayctgggcctctycgcgtcgcccctgtgggamttg
gggggcaaggggaactgacgcaaatgctgatgctcwtgctgcctgctgtgctgtgagtaataaagtcctt
tgtctctgacccaggagtctcatgtcttctgccagcatccatgaaactgtggcaggctaacttgttagct
tgcaagtagggtaaaatctcagacccttcacagttcttgaca
>HERVL_40   Primate HERVL_40 repetitive element - a consensus.
[encoded data, 5609 characters]

>LTR9B   Primate LTR9B repetitive element - a consensus.
tgttgtaggagttattaagaaattattttaggcagatagagaggaaaaggggtccttgggaagttttcgt
ttcttttnaaagcagctccagaaacatttcttgtctagcagaaaagccccggctcttagagccaggccgg
caanctttgatatgcaaatgcaggccattagaaactgggtccacccaacatggcgattcccaccgtcgtc
ttcttgcccttgccccacatgtgcctggcaacatggccgcccccacatatccccacgtgtgtagaacatc
atggcgccctgcatttgcatattaaaaggctagggtgggagggccagttttttcgcgggctacgtgaatg
acatgcctggtcaaaccaatcccctgagccctatgcaaatcagacaccgcctcctccagcctcctcatat
aactggctgntwtccgccgcacncggggtttcctctctcggctttggagcccccctccctctgtctctgt
acaggggagcttcttccttctttcttctcccttctttcttgcctattaaactctccgctccttaaaacca
ctccacgtgtgtccgtgtcgttttatctaaatcggcgcgaggaccaaggaccctggtgttcctccastca
tcggagccgtatca
>HUERS-P3   Primate HUERS-P3 repetitive element - a consensus.
[encoded data, 9017 characters]
gttagggttaccactccwgagggggggaa
>HUERS-P3B   Primate HUERS-P3B repetitive element - a consensus.
[encoded data, 7524 characters]
>HUERS-P2   Primate HUERS-P2 repetitive element - a consensus.
actgggggctcgtctggaatcagcagcagggtgatktacagatgwggaactgtcggatgtgcctcttttc
taagaccctgccacctctctttcttntgggtaaaaggctntgtttcccttcacagaggtctcgctgkcac
gcgggactggagcagagwcctggggcwactgaaggcatcwtttgctggaaggccccgasactgaactctg
tcggccaggacccccagacttcgcttggtgtnttttctctctctcacagtttamaaatggctcttatctc
ctttataatgttaagngttttgctacaggctgcggcaatgttactaagtanaatgagcatttggctcagc
catcaaaggtgcaaatcagaacaatgtggtttccattttttcttagaggtgccatscttgcccccaccct
ganagccacaggcgcgcacggcgcagggcacctcccctccttaccccctcccctcccggctcaggcgcct
gggcgtgcccacggcatgcaaaagccgcgcccaacagccacgaagggtgggagaaaaccgaggctgccgc
tgggaccccacggggctggctggccggtgcctcctctcagccgcgccaanggaacctttcctnccctggc
caaggaatncaaactagtctgaaccggggaaaggatacaataattaaagggacncatttgcactgagcaa
ggggttcttccccccgactmccccctttttgncctttaaactgtttttcttttttccttttctaagtgag
agggttccctncccakcactctgcttctgatagggaagttaacagaggassagcgacccctgctggcgga
tagctgcaaattcggcagggcncatttgagacaatctaaacagatagatncagcccctnaaatatctttt
tagtcccaaacttgattccaagcttcaggttgaggccctagaaagaaaaancagatctgagggatccaaa
gccaggcaacaggcacaatgtaaatgggcaggaccaattcctgctgactaaacccccgccccatggaagg
aggccatgctccttggcataaacgaggcccagggaactcaaaggttgtcgacagcagggaganagggagg
cataggcgagggcggatcattcctwntctccgggccttccctgcttcatggatgaatgccacattngcac
ccatgggtggcacctgccaaggtcaccgggactcggggataaaaagtggaaanngaaaggannatgctcg
ctttctctccccatcacaccctgagttttcactgaaagaaggaagggaaatgagggacgcctctattccc
tgtctttcagaacgggcaaccagctctcttcaccacccccagcttatactcctctggagtgtatcctgaa
ccattgggactgctttgaccctcggaatctgnaggaaaaacgcctcatagccctctgcacaaaggtttgg
ccaaattatgacttacaasaaggactagcttggccttaggaaggaaccgttcattttgataccatncggc
tgttggaccttttctgnaaacgtgaggacagatggtctgaggccccatatgtgcaggctttctatacctt
gcagggcaatccagacctttgccgacagtgtaggattgatccagccctcctgtttgccatctcaggagag
gctgcaaggggcaatcccagggaactaaagawacgagtcccagaggcacccccagcagagaagccagctc
cctcnagccctgctcctccgggtccaccctgacctccctatccagcttcagcctctcacttgccccctcc
tagaaattctcaccctagacaagccccggtctcactcttgctcctccaacagatgcctggtgaatttggc
cccagtaaggtccaggtccccttctctctacaggacttaaagcaaattaagggggatcttggcaagtttt
cagatgaccctganagatatatagaggctttccagaatttcanccaaatatttgaactctcctggagaga
nagttatgttacttttgaatcagaccctgatggacactgagaagcangccgctctgcaagcagcagagag
atttggggatgagctttgtatnacatatagcatcaggaaagggggcgaatnttatccaactggaagagaa
gcagtaccagtgaatgaccctggatgggatcccaatgatgagatgggagactggangaggagacactttc
aggtgtgcataaggagggcttacgtaggactaggaccaaacmcctsaactataccmmgttatccatgatn
gaccaggaatttgatgaaaatctcattgccttcttggaaaggctaagagaggccttggtaaagcacacct
ctctatctcctgattcagtcgagggacaactaatcctaaaggataaatttattactcaggcagcccctga
tatcaggaggaagttgcagaaacgggccctgggaccagatagtactttagaggacctcctgaaagtggcc
acctcggtcttttacaatagagacagaggnccaggaccttgagttcagtagacacaggnaagagacctgg
gaagcttnagtagccaccgtgtaagcccacaaaccccagaantnccaaggtgnacctgttaactgctaaa
gatatggcaagaatagttanctccttctaaagtttatntgctctcgtacaagstttaatttcttncacca
gggstgacccaamasctcagggtacaatnttgctgttagtatatttcacttcttatttctgtaatctttg
gcactanattctttccttgtataatacacgtttaacccatgcatacttaaccttatagaackkgtttttt
ttttttctcacgcctagaggccatcaaactccaaatggncaggcaactgaagcctcggacaatgactccc
ctttgccaggaacccttagatagacctctgggagaaatttgactgccgttttccccaaaacaacgccccc
tgtcggcaggaagtagctaagaccggtcatcgtccatattctaatggcagttagatgtgcctcttcagag
aggggaaa
>ORSL   Putative non-autonomous, hAT-like DNA transposon - a consensus.
cagggctgcattatgactttcgtgggccctaggcacttttgccttcgtgggccccttcctccataaaaaa
atattaaaaattatattttatgactgcattggtataaagatgaatatagaatatattaatattatatatt
aaaacattttctttgacctaaaagttcattttttcttctgattttaaaagaaattaaaacattttcgtgg
gcccctaaaagtatcgtgggccctaggcactgtgcctactgtgcctaatggataagtcggccctg
>LTR20B   Long terminal repeat of retrovirus-like element - a consensus.
tgagagaggagaaaggaagaaactggtcaggcaggcagttagggtgggtcctcggttgaattctttcaaa
caaaagaacagcctgcaggcacagataagggaacttgcacaggggggcttgcctaagacatgcccacagc
cgcacagataagaaaggctacacaggagacttgcccagacatgcccgcaatggaaaattccgtcccctga
cacatgtgcagtaaggggaacaaagcaatatggagtaactcaagctaagggcccgcatgcgcactaggag
gatggggtggagctaccagaaattcgtgccttatgcaaatgagacacccagccctcatcggtttcttata
aaagcctttgcattcaactgtaaaaatggcaaccctcttccgggccccctctccgcggcggagagctttc
ttctttcgcttattaaactttcgctccaacctcaccctttgtgtccatgctccttaattttcttggtcgt
gagacaaagaactccgggtgatacctcacaaggagagactgagagactgctacattgtggtgcattggcg
agactaaca
>HERVG25   HERVG25 LTR-retroelement - a consensus.
[encoded data, 7096 characters]
>LTR42   LTR from human endogenous retrovirus-like sequence.
tgtagggtcccccagnctttcccctcctttctttctctgtcctgaccgaaaaacagantgccttgaccac
tctgtgacccagccagctgcaggtttttccctgcaggcttgaacccaagccagggccttgaacattccca
ggcactgataaaggtatttaggttgttgcccaaaacactgaaagaaactagccccggccctgagccaaat
tccttaaaccctcatataaactccataccctgaccccctcgctgcagacatacctaggtagaacatccct
tttctctcactgtccatcttgaggactgctgcagcccactctgtaggtaagttcccctaataaatgcttt
ggactgatcaccctggcatttagtgcttctttctttggaatcccaactggccccatctcagganggtttg
gggyactcccttgtgggaactcccctgccactgcttttggggcgactccagccacaggttcagcgggatr
aaaca
>LTR43   Putative long terminal repeat from endogenous retrovirus - a consensus.
tgaggcaggataggtagtcaaggaagtaaccatgtccttgggacgcagcaaccgtggtgaccatacagtc
aacacaataagccccagcattcgcattgtagtcgagctcattcaagcaaagctatcttcagtagggamtt
tcccctgtagagagcatgcgcattttgattttacctgtcctcaaactgaccctttgctcattataatagt
aaaaaacacaacccctgggtggagatttaagatgctaatgagacatgcgatgtatgaacaagcatgtaca
gctactgcgcatgtgcacccagaggaccacccagaacatgcttactagtaacacctctttcccacctcct
tatgaataatcatgtaagactcccataaagggagtctcccyagcgccartcwwtgctgtctcatccttat
gagcagcccgccctgaattctctctctcagggtgtactgtctattctgcacctaactttcaaaatattct
ttttcytttgcaataaattrctctatgctgcatctcctttgctgtgtgtctcttgtttaaattcttttaa
actaagaagacaagaaccgaggtmtcacaacagccatcaaca
>LTR44   Long terminal repeat of LTR-retroelement - a consensus.
tgataacctacargtcacatttggcaggcttccaaattaacccacctcagggaggtcttgtgattcatgg
ccacatcctgtccctgagtaaagaatcttgtgagttcctcaaattttatcgtgagttcctcaaattgttg
acgtactgattaatatgtaacctactgacattgaaaaggacactgatttgtttctgaatcataaagtttt
gctgatttatttntgaatcataaagttttactgattgttttacatatagacattttagcctgtatgttgc
aatctgtagccaatgattataacctctgtattgtaccctccaatraaaaaagacaactccgatatgagga
gttcccctcccttctcctaaactttcttataaaagccttccaacttgtaamagacttcggaacacwccca
actttgttggtgtgtcttcccaggtcaatcctcacatttggcttccaataaacctttatcaaattatttc
tgcctcaacagccttaatttcggtcgaca
>MER95   MER95 repetitive element - a consensus.
tgtttaagaaaataaaaatggaggccacagtttagatataccccaaggccaaccgcccatagccacgtaa
ccaaaatttaagtcatcctgatttccccaaaacgctagctctaatcataaacataacacaaaacgtaagc
tttacatccttgtcagcgtgattcagtgaaattaaaccaatcagctatagacaaatcagcttaaacagct
ctacttgccctaaaaagaatgttaatgtataacagccaatcacgaaaaaggtcaaaatacttcctccttt
atgctttataaactgtgctatgactgccgtragnngagcttcttaccactttcrgyttgargtctcccgg
ttcgcgarctgtwctttctctyattgtatgcacaataaactttaaaatttttcctaacttgatctgattt
tawttttgaca
>L1MC5   3'-end of L1 repeat (subfamily L1MC5) - a consensus.
ttaaagranaaarakctctwtggrcttstngcaaaaagaacatgtgacttataagagaaaaaaaaaatta
gattatcatcagacttttcaacagcaatnttttatgccagaagaaaatggagtaacatatttaagatact
caatgaaagaaaatgtaagccaaggattttatatccaagcaaaantgactttcaagtataaannacagac
aaactgttatcaacatgcaagaactcagggaatattgttcccatgancccttcctaaggmatctactaaa
gaatragcttcagacaaccaaaaattagagcaacatcaacataaggatgntgatgagcattaaatatnta
naactaagangantaaatgagggttaaaanggagagagtatagtatataatgactatgntctgataataa
tagatatrgtanaattataaaataatgggggaaaatganaaaaaaatatgtaaaaaaatattttaattat
ttttagtaatcataaattattagtggtggtntagtattagtattgttattctgagactgttgtgtgtnna
ntgtgtaatgtggaataaagcaaatgagtaattatgggatattctaattcctatcatttcctgtgtcctt
gagaaccaggattctcagtgtggaagaaaggagatacagatgtaatatagaagangttaagtaaaaaacc
ctgtagtcctgaatttgaattgnnaanttggaaatatcagtatraactcatgaggtattttatctttaaa
natatatatatacatataaaatatatntatacatatagaaaaatctatatataaaaaaaaaaayacattt
ctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatgagtaccctyaggacccag
attgtggtctctaaataccatttcccactaaaaggaaccagggctccttggagaaatggctaattccagg
tctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagatagcaaggaagctataaaa
ctactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgggacaatttgagcatcaa
taataactgcaatttaacacatcaaatatrtttaaatccatgagtttataataaaaaaatctaattggtc
acctttggagtgatgctagggaaccaactcattattttgaaaactggtaaataaagggaaagaatcaagc
atttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwgatgagggaaatttctctt
tatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcaccattttgcaacccctaa
tgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaactarasatytgcctcctg
atggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatcaaacctgaatctgatcaa
gcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatgttaaatgacaccatrgg
gatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaacttttcttcaacaaataa
attatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaaagacatatcaaccaatt
acaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaaatatatrtgtatacaat
tggaaatttgaacactgactagatatttgatgatattaaggaattattgttatttttaggtgtgataatg
gtattatagttattttataaaatagtccttatcttttagagatacatactgaaatatttatagataaaat
katatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtggagctatagatgaaaca
aaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagttcattatactattctct
ctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgttggacattaatttgttg
gcaa
>MLT1J   Long terminal repeat (MLT1J subfamily) - a consensus.
tgtggcagagactgctagttgtcccccaatatccattctccccttcttccttagtaatagaamccccaat
ttttagctgggcacatggccacccagaaataaagactacatttcccagcctcccttgcagctaggtgtgg
ccatgtgactttctaagttctggccaatgagatggtaagcagaagtgatgtgtgcaacttctaggaaatg
tccttaaagagaggggcaygcccttcttttccccttcctccttcctgctgcctggaatgtagatgtgatg
gctggagctctagcagccatcttggaccatgaggtgaaagccacatgctaaggatggcagagcagcaaga
tagaaggagcctgggtccctgagactatggagcagagctgccataccagccctggactgcctacctctag
acttctatatgagagagaaataaattctatcttgtttaagccactgttattttgggttttctgttacttg
cagctaaacctaatcctaacayacca
>HERVFH21   HERVFH21I endogenous retrovirus flanked by LTR21s.
[encoded data, 6603 characters]
acctattaaaaggctggaa
>ZOMBI_C   transposon - a consensus.
caggtccacaatcccttatctacaattctaaaatccaaaaagctctgaaaactaaaagtttttttataat
ttgaaactcatttggcagcaaaacctgacctgaactgatatgaggctatttatagtctttatttatccca
cttagtgtgaatattcatatatttcactgcagaaatattaatgtgtttgattatagggtgctgccccaga
ccccactgggggtgttatataatatatagtatatgcactatattacctttctaaaatctaaaaaattctg
aattctgaaacacatctggccccaaggatttcagataagggattgtggacctg
>MER96   Primate MER96 repetitive element - a consensus.
cagggccgggactagggtgaggcaagtgaggcgcctagggcgcaaaatttaaggaggcactcactctcag
ggtcgtgcaagtgcagggtcggcatttgcacgaccctgagagtgagtgcctccttaaattttgcgcccta
ggcgcctcacttgcctcaccctagtcctggccctg
>LTR45   Putative LTR from retroposon related to the MER4I-group.
tgtaaccgcgggaccagcccaaactgggcctactctgttgataacaaaatgtcaagttaccttgtaggta
taacagagcccaaaactgcaagtcatgtagcccgggcatgtgcaatagaaaaagctttgacctctaacaa
cacccagaaccaatgattcctcccctcggaaccaagaagaccgggacatgaccggaacctgaatgccgga
actctttcagaagcaaaggggtccgttggcccggaagatctggggctaaaatctgcctcaacatacctta
ccgtaaatggtcaaatttgaagccctccaatcagaccctgccaagccaacattcctaaatcctttccctt
gccctctgatcccttaaaacttgccccagaccccaaatcggggagacagatttgagcccacctcctgtct
ccttgctggccggttttgcaataaagcctttcttttctcaaaagctggtgccatagttattggcttctgt
gtgcatcaggcagcaagcccatttgctcgataaca
>LTR46   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgttagtccaaactgcaccattttgtaagctccctgctattttgcagaccttggtcaaagtgaaacattc
catgggggttcrggccgtgagaaacatcctgcctaaccacctgacnacaaggcggacaaaggcccactga
agaaacatccctatcatatcntgctgggcaaagatccaaggaacaccacgatcacatyctnctggaanaa
gggccagaactgcctcatcataggaacatcttatcaatatcctgccgggcagcaagccatactgcccaga
cccctcccacccagacctataaattgccccagcctgtaagcagtggtgggctctggcattaagctggtcc
cccacytyyrcaggttttntgctggatataaaacctgcatttgctgtagagctgccctctctctctctct
gtgtctttctttaaccctcaccttcccttcaaaacctaaca
>MER99   MER99 repetitive element - a consensus.
cagtgtttccaaactcctgacagatnttaatcttcgggatttaggaacgagaaatcagaattcctgggaa
ttctcaggaatttccnaaatcataagttattcttaaantacttccaacattcttcanactncttactcat
tatcatggatatctaaaatttgtttcnttaaaaagaaatattnagtttagtagtatttacaaagaactgt
agcctatagtaaatattcaaacactggaaaatgccagcgaacattattgggtagtattcgaataacgtaa
cattcggatctcctagcaaggttaacggcactacacagaatcacatgtcgaaattgccaatttaaggact
tattttgcttccaaaacttgttatttcttggaacaccactcataggatttgtataaagtatactatgcat
ataaacntattaatatttattttatttgcaagaatgactcaccgttagcagcagacagggccatgaacac
acacttataacatggcaacagctacaagcaaggctgactgattagatcgtgaccacttctctcctatgtg
ctcctgtcccggttcctagaaatgtcgaccttaaccttcgactccacgtgtcagcgtttcctgctcttgc
tttcaacttgatgtcagtggattccttcgaatcagtaatgtctctatgttgattgttaagctttaattct
cgcaggagaattataacattttttcccattttcccgatttctcgactgatttttcttgggattcgggatt
tagaaaaacatacatttcccgagaaatgctgggaaggaattcccgcatggaaacactg
>RICKSHA   RICKSHA repetitive element - a consensus.
gggtttggatcataatcccgaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatcctaaagtctaaatccctaaagtctaaaatccctaatgtctaaaatcccgaaaatcacaatca
cgaaagattaaaatctcaaatattgaaatcctgaaagccgaattctggggaagggattagtgcgttttcg
gttgtacgcaggatagttgcatcatgttagttgcatcatgttaggtggcagaactattaccttgttattg
tctttatttggaaattaagtatggtttaaggagacacgtatgggtgccaagttgacaaggagtggacttg
tggacttaattttaggtgtcaacttgactggattaaggaatacctagaaacctggtaaagcattattttg
ggtgtgtctgtgagggtgtttccagaggagattagtgtgtgagtctgagcggactaggcggggaagatct
gccctcaatgttggcgagcaccatccaatcggccgggggcccggagagaacaaatacagaaggcgaactg
gtctctctctgagagctgggacagatttttcttctgctgccttggacatcagaactctgggcttgctggc
tttggactccaggacttacaccagtcctnnnaaccgggtcctgaggctttcggacctcagactgagagtt
acaccattggcttccctggttctgaggcttttggacttggactgagccatactgccggcatcccagggtc
tccagcttgcagacggcctgtcgtgggacttctcagccaccataatcgcgttagccaattcttctaataa
attccctctcatrtatatatatatcatattggttctgtctctctggagaaccctgattaatacagatttg
gtattggggaagccgaatatcattccttcttactgtattccttacaacataatagaagagatctgtgaaa
ttgttccctcacaaaaaggctgtgataaaataagtggacgaggctactcaattgtgaaagataaaattta
aaagctaattattattggtgctgcaaaagcagaaaatcacttaattacaatggccgagcaataaccagct
tttaaatggacagcatatacttacaaaatttgtagaccacaaccactctgcaaatacacatgcagcaagt
gtcttgaagatggcaamartgaaaattcagtttaaaaatacawsaattscctgccaaattattcaatctg
tatgacttctacttctttacacaaaatttatgctatgtatttcatcttcgcatcatttccaatactggag
gtataaattgtgtagagacttttagagagttctaatttgttttatgcattttttgcaaatttgactccac
gaaagtgcattatcacaatgttgactttgtgtgtaagcattgtgcatgtatgtaaaaacgttgaaacttc
ctcaataaatgaagagatgtcctttttgtacatctgcatttgtgaaagataaaatttctcaagatcttgg
ctctttgggcgactgcatatgcggtggtgacccatcgcggtttttgatcgatctcgtcaaaagacttagg
ttgttcgtcacggtatttcagatgaccgcagttataaagctgggtgcacacaattaccaaccatagtgat
atgcgtttatacatttccctttttgacctatttctttatgaatacggttcgtctgctcataactgttata
cccgtgcgactgtcattagtatacctgagtgtttatgcttgcaaaaatatgtatgttattattgcctatt
ttattgtgtaaagtggcctatgaagtgttctgtcatgtttttatatgtttctcaaataaatcccctttta
aaaatgtaaataaattatcttttaaagaatttttaaattttttttcagaattatattttcgggattttga
tctttcgggatttcaacattcgggattatggcgtttgggattgtgtctttcgggattatgatccaaaccc

>MER96B   Primate MER96B repetitive element - a consensus.
aggancagggtgagrcaagtgaggcactcgccttgggtacaaaatttaagggggtgccaaaaaactcagt
aatcaagataaataatattttaatgcaatattttttttaaaatcaaaattaatgaaaaaatccatgacaa
aatgtcaaaatkttaaataaagatatkatcagtatgactgatntttcattttgcctcaggctccagtatg
agtngacactgcacagttrctgatcctgtatttaaaattttgatattttgttcatcatggatttttttgc
attnattttgatttttnaaantattacattaaatactatgtanctwtwtwatryattcagatattattta
tcttgattnctgartgttttggtacctycttaaattttgcgccygaggnragtgcctcnctcgcctcacc
ctagttctggntct
>MLT1K   Mammalian long terminal repeat (MLT1K subfamily) - a consensus.
tgtggncagctgttgtttctgcctgcccagcgtccattcccccttcttctggtaacagcaccccaacntc
ccttagggaaccacccttcccccactctcagtccatgtggttcgggtggggctgaccccncccctagctc
caggggtgggcacgtgacccaggcctggccaatcagagcattccatccccctggccacagtgattggttc
agggatgggcacgtgacccaagctgggccaatgagagtcagccctgggacttttgctggaactatnggga
aagagangttctctttctgctggggttgctaagctggnaggatgtaagcctggagctgctggnggccatc
ttgccaccacgnggagagagcctgcctgagaatgaagccaacacagaggaaagcagagccaagagatgga
gagagacagattcctgatgacatcgtttgagcacctggatccagccatgcctgaagccagctacccctgg
acttttcagttacgtgaaccaataaattcccttttttgcttaagccagtttgagttgggtttctgtcact
tgcaaccaaaagagtcctgactaataca
>HERVK3I   sequence of the internal part.
[encoded data, 7313 characters]
tttcaattaattcataaacagaaagggggata
>LTR22A   Long terminal repeat of endogenous retrovirus HERVK22 - a consensus.
tgtgggagatcggtcagagtggtgggaaaaactatagggaaaggacgcaaaccttctgaaaggtcagaag
gttctgcagagccccgggggagaatagctgaaggcagctgttctataaccctgaggcagagggcaaggag
taggtacaagggagtgtaggggaatttatcttaaacaggcttgtttacttatgttgaccaggaactgacc
tttgatcatccgcgcgcgtgacgttccctgaaaggggaacaataaatgttaattacccgcaggttgtgtt
tgctccaggttttcggcattgtgcctgcactgaataaaagcaagcagctccagcttctcggggctgctct
ctggccactagagccaggcagtcacctagctgctcttacgctgcatacctgtgtctgagtactcatttca
tccatcggtcggccagggtctgcgggacagacccggca
>LTR47A   LTR from human endogenous retrovirus.
tgtggaggctaaagcaactccatcttggatgctaatccaccatgttgacttctgattaaccccagttccg
ggaatgcctctaagatttccagtttatctattgttccttgtgtaagagcaggtacttactgtaaatcctg
cccttaggtcaaaacaaccttgatgttatcatacttaccataaatcctgcccttagcaattgtcctacac
attccttctgaagcacgtataccctttccctgtggtatataagccctgggtctggggggtaacggcgcgg
ggatccaccatcttgtctcgccgccgcccaagacacagacgtggcttctgtttgtaagtccctattaaat
gtttctttctgagaaactggatttgtcagcctctttcttcggcctctcagcttccttggacttttggggg
taggtttgcatagacctgctcaccgcggaaca
>LTR47B   LTR from human endogenous retrovirus.
tgtggaggctaaagtaactccatcttggaagctaatccgccatgttgacttctgattaaccccggttcca
ggaatgcctctaagatttccactttatctattgttccttgtgtaagaacatgtacttaccgtaaatcctg
cctttagatcaaatcaaccttgataatctcatacttaccgtaaaccctgcccttagcaaatgtcctacac
attctctctggagcatgtataccctttccctatggtatataatccctgggtctggggggtaacggtgtgg
agatctacctgtcttgcggccacccaagaccacgcttctgtccgtaagttccccaataaatcacccttta
ctgacaaactggatttgtctgcctcgttctttggtttctcggctccttctgcgtttgggggtcattttgc
atatacggccctttcacgaaaca
>MER101   Putative long terminal repeat.
tgtgaacaaatgtgaacctgaaagagccaatccttcaagatggatcccgagtggctaactgggcctaaat
ttaaaatagagccaagcggccatttgctgactagaggtcacacacgtactctgagttccccgaaaaccca
cacctctgtttaactttgggactttcagagctcacctgaaccaaccaatcagagctcacctgcmtcaacc
aatcagggctcagctgtatcaaccaatcagaactcagctgtgtcaaccaatcagaactaagcaagtttga
atccttcatttgcataaacggacctgattgggaacctgggcaggaacttttgctataaaacccaaaccct
ccctttgttctctggaaccgcaccttcgttttacaccgaaggctgcatctccccggtttgcaaactgttc
actggaataaagtctctttcctccaaattccttttcagagaacttttgttcaca
>LTR48   Long terminal repeat of endogenous retrovirus - a consensus.
tgttggggctcagaaaataccccaaagtatggtgctttggcatgctgagtactttgaactaaaggaaatt
ggaaggccttagaagcagccntcagaaccaaggtctntctctgaccttctcttgcctccctgtctctctg
cccctctttctttccccaagcacagggagggnctctctctgaaatttccttatctgactaaggaaacttc
tttccaaaagaaatgcaattgtcttgaatccccntccctaggaatctcatcaaataaccaggaaagatta
accacatgagaagagaagagactaaaagtcatcaaacccasaacaccacacccagacagacttttcatca
tctattcttctgagggcagctctaagagattacctgagagactttttatctgcataataagacaaccttt
gttcacagtgcagttctgcccctcaccttcctataatttgttctccaccacctccnccagagcccagaga
aactttgtcccaggccattggtctgttctttgggcccattcatttcccctaaaaatcatttactacccct
ctaaaattgcctacatcccccccatttccctctcccctatgaagagggtatttaagcttcaaccatctgg
cccttctttgagtctcatatanattttgtatgactcccatgttcatatgcatgttaataaatttgtatgc
cttttctcctgttaatctgtctattgtcagttcatttcagcaaaccttcagaggggacagaggggaagct
ttcctttcncccctaca
>LTR48B   Long terminal repeat of endogenous retrovirus - a consensus.
tggggctcagaaaataataccccaaaatatggcactttgacatgctgaactgaagaagcagcctcaaggt
ctctctgacctcccccccccctcccnnctcccgtctctcaatcctctgtctctcccaaagcacaggatga
agctgttctctgaagttcccttatctacctagaaactggacctgccaaagaagaacacaattgccttcaa
tcccttccctgaaatttcattaactagagaagattaaaactcatatcacaganaaaaaaagactgaaaat
taaacaccacacctagagcccagacaaactttgtcacaaaccattgtctgttctctggtcccattcaatt
tccaaagagaattatttacaagcyattgtctgttctctgggcccattcatttcccccctaaaaatcattt
actacccctcaaaaaattggcctacaawtttgcctacatttcccccatctccccttcccctatgaagaag
ggtatataagcatctgtaccccattgggttattgggtaatcattctcctctgtgattcccccatgctatg
cacgttaaaataaatttgtatgcccttttctcctattaatctgccttttgtcagttgattttcagtgaac
cttcagagggcaaaggggaagttttcccttggcccctacaagggca
>LTR49   Long terminal repeat of endogenous retroelement - a consensus. 
tgaaggaaatcaaaatatttyaccccaaaatatayttctttgacatattttgagatggctrttcagaggg
cctgcaaacagaagtagccctgcaaagctgtcttttgtgggggagatttgcatctgtagagaaaatctgc
attgatgcagccaggctttctctgaggccctcccttgtctggatctaggaaagattaactgagagtctga
cacctttaaaggtctgaaagaaacatttaccatctattctctctgagggctgctacctgtgaggtttcat
ctacataacaagaccacctttgctagccaggcctcctcttctctccctcccataacctgtcttgccacta
taacctgatttaccaccataacctgttttgggccatgctccgagcccccattctttctgtaacctcaaga
tggtatataagcttctgtaccccattggggggagttttgggtattcactstgattctcccgtgtrtrcac
gttaataaatttgtatgccttttctcctattaatctgccttttgtcagttgatttttcagcgaaccttca
gagggcgaaggggaagttttcccttggcccctaca
>LTR8A   related to the MER4I-group.
tgaaactgcctttgcaaaaattataacagtgagaaaattatgacagtgaaagagatctgatctaaccaac
ccccatcttgcctttaacctccaaactgcccttaatyattcctgggcttgggccaagctaactttgggag
acatttagtttatagtttaaatgataatagcccttccccaaaactmaaccgcctttgtaaagctaatgaa
agaccaccaggytaggaggatgagaggagcctgaattctgctaaggtgtagacataaacgattaccagcc
attattccagaggtcacaagatttgcaacttccccaattactcctgcagataacatcactattgtagaac
ctaagattggccttttgagatatcttttcaggtttttttgcatttctgacaccaatggctccacctggac
ccgccaaccactcctgtggccccacccagaagtgactcagcacgcacgaggaccattttccacaccccta
tgattgcatccccaaccaatcagcagcaagcacccattgcctagccacccccaccccctgccyaccaaac
tatctttgaaaaaccctagcctctaaattttcagggagattgatttgagtaataattctgtctcccacat
ggcgtggccagccttacgtcaattaaactctttctttattgcaatgccatggtctttgtctgtgcagcgg
gcaggaagaacccatcgggcggttaca
>MER41E   internal sequence belongs to the MER4I group; subfamily MER41E.
tgaaatagctgcataagctatgggccgataagaccctgaaaaaccagggtgtggaccaagctggctaaga
ctgactggacccaacatggtgctggatttgacctaggtttcacctaggacctcattatatgctcattaac
atactaaatcacacacccaccagcaccatgacagttccgggaacacccatatttggtgtaaaaatgggtg
gcaccacagttctgagaaatcttcacctttttccaggaatcttcatgaatattccaccccttggttaaag
aaacccataaaggtagaagccccaaacccymttggcgcaactcwctctcttgagtatgcccgcactcccc
tttcttgagtgtgtacttttcgctttgcaataaatctccgtactttcactattttctgactcatccttga
attccttctcgcgatggtgtcaagagcctggacaccggctggggtcgasgtcccaccggcgtttggggac
ctcccccagcccaccggtatca
>MLT2E   Interspersed repeat MLT2E - a consensus.
tgctggattgttctgttgtcaacttngttaagctnggaactatgtttcccagaatccccttccctgtatg
gttctgggttagagttggccaaagatgaaattgtggaagatttggaaggcagaagtgaagcagcagccat
tacactctgaaggtcatcattggttasaggcagtgagagatggccagatgcagaggtgcccaggaggttc
cagcttgtcctcactctcccctgctcyatatccagctcttcttcctgaccactggccctgctgaccaaca
gcarccccaggcccaccaccagatgcttggctgcaaactcacagaggtagtngccacacagagncaacaa
ctttccatagagttctccaccagctccccttcatggtcncacttyagcggctggatatgcttagcttcaa
atttccccacaagctccagnctcattcaactncgccagagctggttagtgaccctttttctgatccttca
actcccccctccagaccttcacttccccagctcctcccacaattgtataaggtctaattcctataataaa
tcccttattccatanatactacatagtggctctgcttccctgactganacctgactaataca
>LTR50   Putative long terminal repeat of an endogenous virus - a consensus.
tgtgccagttattaagctattgtctctcagctccaaacccacccttctatactctgctctgtgatgctgg
ggctgggactcgactctgcaaaccacatttctgctttgccagctggctctccctgttaggctctgccaat
agggggcgctagagggagactgcaaggggctggaggggaggaagaagggacttgctccttcctgtctgct
gctgtttcctgtctgcttcctgttcctgtcagcatcaccccagcaatgcttcttcaccctggcagcagtt
gcttccagttgattccagcagcagcagttgattccagtttgcrsagttccagtttccaacantttytccc
aacactcccagaaccagcctcattgtaccccctcctcctcctcagagacaccagcaccagctgggcagtg
ccccctcctcagaggtctgagtcccagctccatggggcccctcctctgagctcagagacaccagcaccag
ctaggcagtgccccctcctcagaggtctgagktcccagctccatggggcccctcctctaagcttctaagt
tttaataattccaacctcttcccttttgttcccccagccctagggggtggtggtagctgcttcctgcagt
tactacctctgtgataccttagtgttctctttttgccttttcagttctctaatamacaactttataccta
gttaacctaagttaacaattctttatattaaattctctctgttaaaataactggtgtggtttctgtcttc
tcctgactggaccctgactgataca
>LTR51   Putative long terminal repeat of an endogenous virus - a consensus.
tgtgatctgagagaccaaaatagangcccctttatcaactaagacgggccctaaggttaaggaaacaaaa
gttacctacgggtcaagggttcagggcctggctggcatggcaaatttctaaattcctacaagaaaaacca
cactcttgctaaactccctaacacaataggagctatcaggcaaattatcananccctcctaactctgatt
tacaacccagaccactacaactctgattggacagaggactggccttacaaacattcttttctgataagaa
actgcagaccataagccagttttggccagtttanagaggctgcacacaaactgtctttgtgtcctatagt
tcaccttttgacgtaaagagccaaattntacttcattttaatgctaaaactccaccccaaagtgaacatg
ggatgtatgttacatatatgtttacccattgcacatgtgctcggctcccctcataaatatttatagcttt
tcccccaaacctgctgaatatgtatgtctccattgtgtaataccaaccctgtgaggcataaaacccaacc
tgccctttccctctttgaagagagagcgcctttggtctatgccagagactatctcttcccagtttgcaaa
ctgatattrccaataaagctctcctttctactatttagcca
>MER103   MER103 repetitive element - a consensus.
agttccatggtcaaataagtttgggaaatgctgggttaaacaaagttaaacaggtttctttactgcagga
cttctcagagcctttaatatgctaatgtgcattgtgaatctccaagaggggaaatatagtatgcagtrtt
tcccaaatttatttgaccatggaact
>MER104   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatgtcatagtttaattggcagcattttttctttcttagtggtacataaaataatggtgc
atcttacaatcgatggcatcttagattcgatgaaatatgg
>CHESHIRE_A   Nonautonomous DNA transposon, HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtaaataaagttttat
tggaacacagccacgcccattcgtttatatattgtctatggctgcttttgcgctacaacggcagagttga
gtagttgcgacagagaccgtatggcccgcaaagcctaaaatatttactatctggccctttacagaaaaag
tttgccgacccctg
>CHESHIRE_B   Nonautonomous DNA transposon, HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtactgcccgtaaact
aagaatggtttttacatttttaaatggttggaagaaaaatcaaaagaagartattttgtgacatgtgaaa
attatatgaaattcaaatttcagtgtccataaataaagttttattggaacacagccacgcccattcgttt
atatattgtctatggctgcttttgcgctacaacggcagagttgagtagttgcgacagagaccgtatggcc
cgcaaagcctaaaatatttactatctggccctttacagaaaaagtttgccgacccctg
>HUERS-P1   Primate HUERS-P1 repetitive element - a consensus.
aatttgggggctcgtccgggattgcccttgtggctacctgcccgtggtttggtagcccccctctggcgat
ggatccagaggccagcccaagtggccgcctagttctcttggactgggggctgactctggtactatctctc
taccggtggggcgctgccgacccaatgtgcatggatttaattgcaatrgagaaatagtcctggggagaca
tcccataactgtagccctatcacagggtgtctgtctgtagccccattgcagggtgtctgtctgtagcccc
attgcggggtgtctgggttggtgagtattctaggcgctgccaacgnccccttccttctcctgactkgttc
tgtagccccctggtggggtgtctgttggtagccycacggggtgtctgtctgtagccccatcatggggtgt
ctgtctcagtttagctcctatggggtctcwgttggctctccctaactagtaggaagagtctgtggttrgg
gagacttctcctcaatcaggaagatttcagggagatttctcagacggagaataggagaatagtttggaag
ggatactcttggatttgagacttggtctgggatctgtgttttgaaggccttctgttcgtcttatctttgt
gtgtgtttgtatatgtggaggggatctctgaaggaattgctgatggaagtccagcaggcctaactcagag
aaccctccttatttgtctggtcacatttggtgagccctaaagaaagctcaacaggcctgtctyggggtga
ctatctgctcttcgccttgcccagagaccccactgtgaattaccatttggaggtcatccctccccacctg
ga
>LTR45B   Putative LTR from retroposon related to the MER4I-group.
tgtgtaaccacaccagaccaatctggttcaacttttatgtaacaaagttgtgagttgtttttcagttgcc
atggacccccaggttgaaggtcatgtaacctgagcatgcccagatgaaccaagygtgcaaccacaggggg
aacctaagtgctcagaccgaggagtggggactgaattaagaagtggacaccacatggcaggatccaggat
ccaatcagattgagccctggcatcaccccatggcaggatccaatcagatcatgcctcccagcatcaccct
cattgcaagatccaatcagatcacacctcattaccctatgcctataaaacctgccccagaccccagctca
gggagacagatttgagcatttcctcctgtctccttgctagtcgacnnacttgcaataaagcttttctttt
ctcaaaagctggtgccatagtattggcttcgcatcaggcagcagnnagcccattgattgcttrgtaaca
>LTR52   Long terminal repeat - a consensus. 
tgtaataaagagtctgactccattttttgatgtttgactgctgacagcttttaagcctcacccctccctc
ttccctttgccccacatctgggcaagctgataagaaagcccaggtgctccctcctttggtactagcagga
aattcaaaccatacaagcccctgcctgcgggaaccctcaccccagccccacccccctaaccacaataaaa
accccaagccagtctcctttccctgctctctcaagacatttttggacctgcttgggaggcctgccctgct
ctccccagaaagcctcaattatgtaagtaataaaccttttcataccctcttggtgtgtgtgtggcatcat
cagtcttaacatccaaaccaaattttgggtgggggagtccatcctgcctctgcagagtgaccayaacaac
a
>MER105   Non-autonomous DNA transposon - a consensus.
cagcctttctcaactagggttctatgagagaattaagccctaatgccctaaggcatccattgtatgtaat
gaattaacttctctcctatgcatcctagaatggtactagttatataccatccttgggagaattgagaaaa
tagtcactcaaatcattttctgtgttctgtggttcagatgaggaaccctggttgagaaaggctg
>LTR53   Long terminal repeat - a consensus. 
tgtggtgtaaggcctaaaattaaggcccaatattatgtgctgccttgacatctggtgaaatcaggagggc
ctcaaatggcctaactacaagttcccctccccactctgctcccatggataaggtcccctagccaaacaac
cctccttatcaaggggaccaggcacagttcctgcttatccctgntgagtagygggtttcagttccctgcc
agcccgtggaattattcaaayaagccaatcacatcctcctgcgggaaccaggggtcacctcaccctcttg
atactacaaagcctgcctcccacagcccctggttgttcactctgttcctgagtgcaacccccatgtggcc
ctgtgtggnatgtggtgtcctcctcccccaggctgtgagtatatgtgattaataaactgctgtcaatctc
atctgtccagtgttgggtgtcatgtgtttarccatccccataaccctagggtgggaatccctccctcacc
aatggggtgaagaggaggcaatwaaaaca
>LTR54   Long terminal repeat - a consensus. 
tgttaaataaaatttataggaggccattgttttggactaagctcctgcactaggccccaacagaacagac
caaaccaaaatggagtcactcatgctaaagttccatgtcaccaagctgaaactaagttgtttatctgacc
ttccaagaaatcaggagagagagagagataacagccaaatccccaaacaggccagttttagccagcatga
taaggaagtcccctctgctttaacctttaacctaatgttaagcaatcagttacttntctattgttctgtn
tccctgtnttaaccttacaaggaaagtaactttgaaatgaccaatctgctttttgttctctgtttctgct
ttcttcagcccttttctgtctataaagccaacctcctctgctcagctcatyggaacactcattctatttt
atagaatgaggtrttgcccaattctagaatcacaaataaaagccaattgagatctttaaactaaatttgt
tgtaattttgtcttttgaca
>MER106   MER106 is a hAT-like DNA transposon - a consensus.
catgcattctcaacgggggcgatatcgcccccaagggggtgaaaattggttcttggggggagaaaaaatc
ttagatattacaatggtttgtggccctccaaagggccacagtacataaacagatatacagtatatctgtg
gtattaaaatttcatggngggggggggtgattaggaaaaaaatgtctaaaaaggctccttaggggggcga
taatgaaaaaaggttgagaaacactg
>MER107   Non-autonomous DNA transposon - a consensus.
caggggtgtccaagggagagaatacagtcatgggttcttagtttctgtttctggttgggccagtaaagcc
ccttcctcatccctcttttctacttatcactagagacagaaactaaaaaccatggcttcaggctgctaaa
agcctaaaacaaaacaaaacagaacaacaacaaaataaggcgggttggacaagcttg
>MER44B   Nonautonomous DNA transposon.
cagtagtccccccttatccgcggtttcgctttccgcggtttcagttacccgcggtcaaccgcggtccgaa
aatataaatggaaaattccagaaataaacaattcataagttttaaattgcgcgccgttctgagtagcgtg
atgaaatctcacgccgtcctgctccgtcccacccgggacgtgaatcatccctttgtccagcgtatccacg
ctgtatacgctacccgcccgttagtcacttagtagccgtctcggttatcagatcgactgtcgcggtatcg
cagtgcttgtgttcaagtaacccttattttacttaataatggccccaaagcgcaagagtagtgatgctgg
catattgttataattgttctattttattattagttattgttgttaatctcttactgtgcctaatttataa
attaaactttatcataggtatgtatgtataggaaaaaacatagtatatatagggttcggtactatccgcg
gtttcaggcatccactgggggtcttggaacgtatcccccgcggataaggggggactactg
>MER61I   Primate LTR retroviral-like element MER61I - a consensus.
[encoded data, 5254 characters]
ctaatggcagttagatgtacttctttagaggggggaa
>HERVL68   HERVL68 repetitive element - a consensus.
gcactrtntgggannnttnntggaanggaagaagagggaagatggatgacaaaattatgcctgggtvgct
atggagttattcatggtatraaayagcagctragctgctgtctgttatgagaggtaaaagttacctgtgr
aatttgaaaatgatagatccaatcacagagagttggcnysctggatcccytggctgcttttggccwtkct
ggctaaagtnaggaaraarcacancycarrtgatgtctttggtttttgttctytcctccarktgggagga
gaaagggcccaaacattccnaaangtgagcttnntwtgsaswaaagwyawwaacaktwnnttgnagttnt
cttctccaggtggnaggngnaangrtcngaaaantnctnnaggcnngnwttgagtgrrccaaraatgtta
aaagtttgcattgctctctcctccaagtggaagraaaaargttaaatcagttcccagggctggagyaang
ctttagataaaccagaggaggagaaaaagtaaaaaaaaagcccnccaaacaagwaaaccactctagccnt
ttctacagcttagctgctgcyacagcaactcaacnccctcctttcmctacaaccttcanctccagcanct
gtaatgttaaccytgtaaadtgctnaatttactgctaggggtttgantaaacatghaatgagtaaaaaga
aggaaatnattatwgaatsrctttgtattttgtggctattgcatctggatgtatgataaaaattratgta
aaatgttatatgcttgtaatttcataaatgctagaggaatcatcctaatmgggaaagctgcaaagaaaaa
aaagttagtggnawcacaactcccttgctttytgctgcyggtgggtggattggaatttaaactctttgag
tattggaaasagaacaagtctccataactgatgatttttgcctattggarcctctgnaaaaagggagaca
acatnaaaagagaggcaatctccagatggagatacacttttggagttttaaaaanyagtttttagtttgc
taatgwgctcttgytgaaatgagatgtctgacccttagaggctgatgattttcagcctgatgtgcatgat
ttttgagggggtcaatttggactctaaractgacaagataaaaaggmctyttagaaaagccttgcttgtc
acttggacttggaatacagctgtctggntcttcagtntctcagctttgctgctgctgaagaaaagccact
ggcttttttggaatcctgaattcacagatcctaattgcctgtacctgactctaagctgaaacctcatact
gtctgctgtgrgctgtttcagcctcgngntgagctgtgctgaactgaaatnngntgaaatggctcgactc
aatgaacagaactcagactctgggactgttgcagatttaggaccaccctctgtggggccataaactatga
aaacatcacggatgctggctggactgtctgggtcacatacagatgcccacaggaaagggcttgttctctg
atgggaccatctaaaattgagctgctgattggctctatatttctgatacagagactaattgcattcttaa
cttgtgatttctgtcgaaagctgcaagttgggggagggcacattacaagaagtgtgacccctccacccac
tcctgacagattggacttgaccccctctcggggatgtctcactgctattgacttgttgtgttcggctttc
tggattagttgcagtttgcaacaatggactgacagcctgagtctacttccctcacctttctcctggtaca
cacatcttagtgagacagtttgattattaaatgcagctgtccccagaaagggattgatcttttttttcct
aggctgctcaccggataaatgatcaggacgaaaagggtgggaaggttatgtaaactcattttgaaaaatt
ttgaaaattcagaattcatcctgaccaatttctgaacatgatgtgtctttccggttaagttgtataaaaa
tgtttttctataaaaatgtttttgtccctcttgcatacaacccttccagacaaaaggtctgggtgagagt
aagagatgattggagaaatatgaagttaagattgtaagttatgaatattgctgaatgggacacactgatt
ttgtaacaacggagaaaaaagaaaaacctatggaggcacggggtgtgagagagggcattaatgatctttg
tttttcagaactgctcctggaagctttcccctcttcctgaagaaaaattccccatgctgcctttccaagc
tgctgcgagcgctttgaattcaaactgactgctgagcctaagatcacacctgacagcgctgactatgaga
cagcagggggtggccccagctcctgcactttccacgaagaacacctccagatgtcatccacacacatgag
acggatgaactggtgtcatggacaagcaaaactgtttggaactgactgcctttaggcagtccctctgaaa
ccaaggactaaactgaattaattggactagactctttgggagtagtccccgtggtaagaggccacactgg
ggaccctgttaacctgtactgcctgactaatgtatgtcctgcttggggtaccctaacaattgtaaactct
ttgtttccaggggtaccacgtgtgccctctgggattgtacttttatgtgtaccctgactatcatgacact
gcctcagccctggaaggctttcaggtcagcttcaacttactggccagagttgtgctgtgcctgaattgat
gcctcaggccaraaaaaaaaaggttaatacagaaacttaaggaggaagccacctggctttctaagataga
cctttatggttaatgggatttgttttaactggctaaattcaggacccctaaagggcataaactgagatca
atactgcaggttggtctcaccctgctgcgtggggtcctactgataataattttgctgtaaagatgccttg
gccaagggggtggactgtgcagaagag
>MER83B   Long terminal repeat of endogenous retrovirus.
tgtggagtcctgataagtaagcaacaatgaggaaggggccccaggtgggggagggccccaggtggggaag
aacaatgaacaattgttctgagagacggctaatcacaaacaacccgcgggcacaacgacctcgttccgca
tgtagccccagcagcatgacctcattctgcacgtagccccctccagcacgaccctataaaacttccctcc
agcccctgcctctttgcagacagccccttctctgctgtgctgcccgttgcaaccttgcaacgtattttca
tactttctctaataaatctgcctttctttacctacaactgtcttggtaaattcctttaccgcctgcgaca
ctggccccagatagttgcacccgtgaca
>MER83C   Long terminal repeat of endogenous retrovirus.
tgtggagtcctgataagataagtaagcaacaatgaggaaggggccccaggtgggggagaacaattgttct
gagagacggctaatcacagacaacccgctggcacaacatcctgttcccaaatacctcgctccgcatgtag
ccccagcagcacgacctcattctgcacgtagccccctccagtacaaccctataaaacttccctccagccc
ctgcctctttgcagacagccccttctctgctgtgctgcccattgcacccttgcaacgtatctttgtactt
tctctaataaatctgcctttctttacctatgactgtcttggtaaattcttttactgtccgcgatgccggc
cccagccagtcgcacccgcgaca
>MLT1L   Mammalian long terminal repeat (MLT1L subfamily) - a consensus.
tgtggcagacacngttggttgcctacccaatagccattctcccttcttccttgctaacagaaccctgatt
ttgttcaggtatcaggcagccatgtgctttaggggaggctggccctctcctcagccccagagggtgaatc
ttgattggtctaagccaatcatggtaatcccattccccttgccagtgattggtttaggaatgggcatgtg
acacaattctggccaatgagacatgaggggaagtctgctgggagggcttctgggaaaggttttcttctct
nattaaaaaacntaaagagaaaacatgtcctcttttcttgctcctgctttggacgttgttgtgtgaggat
gtgatgcttggagctgcggcagccatcttgcaaccatgaggggacmagcctgagangaaaagccaacacg
ctgaggatggcagagcggaaagatggaaagaacctgggtccttgatgatatcgttgagccgctgaattaa
ccaaccctggaaccgccctacctccggacttcttgttatgtgagataataaattttccttattgtttaag
ccacttttagttgggttttctgttwcttgcagccaaaagcatcctaactgacaca
>MLT2F   Long terminal repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttggctaggctggaactacatttcccagaattcccttccctgtat
rkttccaggttagggtgggccacaagagacattctgtgtgagatttggaaggcggaagtgaagcagcagc
cattttgttttctgtgctcggagaggtcagagtcagcaggcgctgttgcagctcacacacgttgtcgctk
atctgctggctcacctcgttggcgtggggcagcagccgggcccgcagctgctccascttcccctggatcc
tccttcagcttctccgactcctgggccaggtgtgtgtktagctccgtgacgaagggcgccagcttctcct
gcaggacacccacatcatcgaggtcggaggcagtgagagactgacatgggttccagtttgtcctcgtggg
ttccagctcatgcttgtgggttccagcttgtccttgctctcccccactttatatccatcttcccttcctg
actgcctgccctgtggacttcaagctccagcatcagacgcaragacaacagccttacagagactgcttaa
ccagctcccacaattgcgtaaggtcaaatccctataataaatctcttattatatatatctcctagtggtt
ctgcttctctgattgaaccctgactgataca
>LTR55   Putative long terminal repeat - a consensus. 
tgttatataaatgagccaaagatggcctctgtgtattggcccctaggttgtttatttcttcactgcaggc
tgagacctgttagctcaaaagcccaccggcaccaaactcaaatttttacacatccawattgttttaaaaa
tagcccaaacaagcagatttttagccatttagagcctgcctgctttgcataccccgcgaaacytcaccca
acatctgctagccattgcacttataagrccccaargcgctgctgcyctttggagctctctgacccagaga
ctcccyaaccgtgctgctgagaaacatcacttagacacataagccccctctccgattcccctctcccccg
ggagttcccttgccctcctccccttctggatggtggtcccastccctaaacctctrgacagtctcwtgct
gtgaggagcttccccttcatgcaaccctgtccaagtgccacccaataaagtttgttgtgtggtactgccc
ctgcgtggtcatatctttttccttgatcagcccccaaatcccttraacccccttcaca
>LTR56   Long terminal repeat of endogenous retrovirus - a consensus.
tgagaattaagaaaagaacttttatctgaggaatgcaagtcttttaaattatcaggcccagagagacatt
aaaatgagaccgcaatcacgtcctactccccactttgagctatgtatttcatctcttgaaactgcttgct
attgccacaagtagctataaattaacctaataatgccacaccrgacactataacccacaccctatagctt
aacaatgtatatggccaatcactaatcaatgttatttctgtaaaccaatgagaattyctgacaaacaact
ttgtatcagcccactccctgtccccctcttttttgcctttaaaaatccacttgtaactgctgctaattgg
agtgtatattcagggcaacttgaatctatgctcctgggttgcaatcctcaagctttggctcaaataaact
ctctacttatattaattttgcctca
>LTR57   LTR from human endogenous retrovirus - a consensus.
tgtagtgtgacaggtcccccaaccaggttacttaagggtgtatgtccgctgcctgaaccctgaaggccag
gtggtgagccaaggccatggtgcccagctgaggagcaggtgtccctgagaacccaaacatcccrgagagt
atctgagaacctaccaaggaaaacagtcccattacacacacacagtaggcaaagagccagaaaattagct
taaaagcagcttagagatgggaggtggcacggatctctagagctgtcctgctgccatccaggagtgccct
gtatgtaagtcctaataaactcatctacttatcaagctggacttgtccgagtcattctttggtctctcrg
ctccttcccagtttggggggaggtatttttttatatacagtcccaggtttttcttgtaaca
>LTR58   MER4I-group; a consensus sequence.
tgagacagtatagggaagagactcagtcctggcagacaagagacatggtaaccaagatcccaatgggcct
cacatgtccaggcatattccctcccctaccttcttgcctcccttaacaagctgacccaagtcacgtagca
gaaagggggncctctcctaacttagctgaccaggctgaattcctaaccataaaaggaagaacctaaccat
ttatctccttgagtnatgtcttccaaggttgctgaagcaggactctggcattcctgataagaacctgacc
agatgcagccggctgaagacaagatggactccagcgctgacctttcaccaagtttttcttcattataatc
tcattgtaatactaaaatctccgcccarggtgggrnttatctgccahtttctrgacatgcgatgcatgtt
agagcatgacgtctcactgcgcaggcgctaaaaagaccccgcctaaacatgcttgcctacacgtcgctcc
tttttcctgcctcaacttccttaaaatgacaagagccgagcccttttgggagctagcatcaggatccctt
tcctgtacgctgctcccttgcgctgctcgagccgcaagcctattaaaccttgcctgagaaaatcggtttg
gcctggtgttaatttctacttacatgagagccaaggaacttggggtcca
>LTR59   MER4I-group; a consensus sequence.
tgagaaataaaaataaaattctaagcccccaactgactgaacagaccccctcttggccgagggaacccca
gagaaaccttggaagctgarttcacggccataacaggatgggagatcagacacgcctcattataycccct
ccctcgctaactaccattaggttttcttccctaagggctaaacagaaaccagccctttcaaaagtctcca
cactgataatgtccattactagcttatcttcccaggtacagaacaaagacaagatgagattaatcattcc
ttcacccctccccgagacatctgcttantttnttcctctattcccttttycttcaaatgttcaccttatc
ttatgtaaaatgtagatttactgggcactaactaaagtctcacaagtatgtaatcattcgtctcactgcc
acccccttttttaaggaaaatgtgtaaatactaaacctcctgagaacctctttggaaaaaacagccacag
atgcttctgtgacttacatttttcctrgrtgtgccctcaagctggctcagtaaacctcgatgntttgaga
cttatacctcaatcactcattttggttatcacyctca
>MER4BI   MER4BI LTR-retrotransposon - a consensus.
[encoded data, 6816 characters]
atgttgcctctggcaaatcttggccagaagggggagaa
>MER50I   Primate MER50I repetitive element - a consensus.
[encoded data, 7308 characters]
>LOR1I   Primate LOR1I repetitive element - a consensus.
[encoded data, 8236 characters]

>LTR26E   LTR from human endogenous retrovirus-like sequence.
tgaaaccatcctcacagggctaacaagaattacatgccgggttctgggcagaaatatagttataattaag
cattaatcaggctgcactttggcccacttccttgtaactaaaagtcatgtagcactagatactgaccatt
tgcatccccattgttcctatagataggatttctgaccttagaatcataggtttttgtttaagaattgatt
tgcatccccattgttcctatagacaggatctctgaccttagaatcataaggcttttgtttaagaattgct
taagatgtttttcagatcctgaattccagcggaacagctgatgccaaccagtttgaagacccccacagag
gaaccgaatcagcatgagaacgcagtttcttcatctccctgtcccatgacttcaccctgcactcttcgac
caatcaacgatccccacacctcggcccactccaaaccccttaaaatccctagccccaaactcctcgggga
ggcggatttgaggtttcctcctgtctcctcattcggctgccctacgattattaaactctttctctgctgc
aaccctggtgtctcggtgtattgacttgccgcgcatcgggcaacaaacctattacggtcaca
>LTR16A1   Primate LTR16A1 repetitive element - a consensus.
tgtagtagatgctgttggtgccctgcccaggtcccytttmtcgggctagtgcatccattccccagctgct
gtgagtgttggctgctaatggctcacagctgcccccttctctggagaattgccctcagctaataggagtt
gcctcacctgggaggttaccccccaccgggcagcccacagccaatagactgactgatacaggggtacaaa
agcctagcycccttgcctcaaggtgggacaactcactctgtggtgcaattcatgctccagagctccccat
gggatcaggctgaggctagacttcagctgaaaccacatccttgcttagcttcttcccctgccctatcctg
cttccctcactcccttacaagtttctcctgagagcactccctcaataaatcacttgcacaagaatccctg
tctcaggctctgcttctagggaacccaacctaagaca
>LTR24B   Long terminal repeat of endogenous retrovirus - a consensus.
tgtaaantaaaataaaatttcaggaccctctaaatttattatgccaagggggaagttaagccctggagac
tgagtcagtagcatgtttgcaattctgtttcttagattatagattaactctcttcctcattgttcttgtt
ctgtaaatgactaggagagaccagagaccagacctcccnccagctyccnttccaatcactgatctttgtt
atagattaactgcctcctttattgtcctgtacctaactcagaccagatggtgcaaaagaccccatgactg
ttacatcttcagtgtggaatgttaaatatacctttcccgaaagaaaaagaccaccttaactaatcagatt
gttgtaactatgcattaagccttatatagaaagatgttgaaattctgttaagcttccctaaactttgtct
atataaatgatcccaaacttctacacttcggaacactgacttccattctttggaatctgtgyttccnggg
tggnccatcntcaaactttgcacttgaataaactctctttaaactagattctgacccttttgattatttt
aggttgacagtgcyta
>LTR16D   Primate LTR16D repetitive element - a consensus.
tgtggtggccatgaaaatgtgcctctcagatctcctgctgcagggagcatagttgactgacggccccagc
tgctgtccyttggratccaccactgcgtttgcaccaaggccacgcttccctcaggctactcccagccagt
gactgagcacggcaggggtgctaatgcaggcccgttcctgsnagatgcgggactcctccgacgggcaact
ttggctcgaggactcctcatcagcctggttgaaactttcttagaactgcactgcagtctgaggctcttcc
tacccaatccttcttccttccccctctcctttcacaggtgtcagacctgcatcatggtccgaagtctctc
ctngcccgctcctgctccctccccttttatctttcacaggntttcccctaataaatctcttgcacattta
accctgtcttggcgtctgcttctcagaggacctgaactaacaca
>LTR60   LTR from human endogenous retroviral-like element - a consensus.
tgttagagtaggcagatagccagacatgagcaggagnggaagcccctgrgaaaaggaaggtctggaaaat
ctcacacccsagagaccacccaaaanatacataytagatatgagcagagangaggggaaatacctatgca
gaaaaaaatgccccttaagatgcccagtaatcattcactctgcagttaaactgtcagaatgttgctagct
acatgctgataagggaagagggcaaaggagaaattcctaagagataygcaggtgcagtaagtacagattt
gaccactatacaaccttcctggggtggcagtaatgagcaatgcmgccattaggtagrattcatatccaac
accgggtccgtgcatgcgcatcaaccaacagtaagggaggvtcccacaagcctgggtaggaactaggtgg
ggaaargcagggacttaaggcagaagcaggaaaactagasaaagaaaaaggtggagacttaagacagagg
tgggaacttcaaraaaaatcygacatcataaaaaccccgtgcagactctcagggctgctgctggctcact
ctctttcagcagcccrctctgcctca
>MLT1E1   LTR from retrotransposable MaLR element - a consensus.
tgtggtaggcagaattctaagatggcccccaagattcccaccccctggtgtacatgccctgtataatccc
ctccccttgagtgtgggcgggacctgtgaatatgatgggatwtcactcctgtgattaggttacattatat
ggcaaaggtgaagggattttgcagatgtaattaaggtccctaatcagttgactttgagttaatcaaaagg
gagattatcctgggtgggcctgacctaatcaggtgagccctttaaaagagggtctggaggtctttctgaa
gaagtcagagagattcgaagcagcagagatgctctcctgctggccttgaagaagcaagctgccatgttgt
ggagagggccatgtggcagggaatngcgggcggcctctaggagctgagggcctcagtcctacaaccacaa
ggaantgaattctgccaacaacctgagtgagcttggaagaggaccctgagcctccagatgagancgcagc
cccggccgacaccttgatttcagccttgtgagaccctgagcagaggacccagctaagccgtgcccggact
cctgacccacggaaactgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgtt
acgcagcaatagaaaactaataca
>MLT1J1   Mammalian long terminal repeat MLT1J1.
tgtggcagagactggctagctgttcaccaaatctgtttccttttcttcctgggcacacagctggactaca
tttcccagcctcccttgcagttaggtgtggccatgtgactgagttctagccaacggaatgtaagcagaag
tgatgtgcgccacttccaggcctggcccataaaaacctcccatgccatcttcctctctattctctcttct
ctgcatctgctggctggatgtngacgcccagggcgaccttggaagccacgtgttgaagatggcagagcct
ccatcagcctgggtccctgaatgactgcgtggagcagagctccactcccaccccnccaccatcaattgga
cttcacatgagcaagaaataaacttctattgtgttaagccactgtacattttggggtttatttgttacag
cagctagcgttaccttaactaataca
>MLT1J2   Mammalian long terminal repeat MLT1J2.
tgtggcagagactggctaggtgttcaccaaaacccgtttccttttcctcctgggcacacagctagactac
atttcccagcctcccttgcagttaggtgtggccatgtgactgagttctggccaatggaatgtgggcagaa
gtgatgtatgccacttccaggcctggcccataaaaacctcccacgtgatcctccatgctctctctctttc
cccgtctgctggctggatgcagaggatctagnggagaactccgaggncctaggaggatggcggagccaca
agatggaaggagcctgggtccctgagtcactacntggaggagagccacccacacccgaccagaacccnca
ctggactgtgacatgagtgagaaataaacttttattgtgttaagccactgagatttgggggttgtttgtt
acagcagctggcattaccctgactaataca
>LTR1B   LTR from human endogenous retrovirus-like sequence - a consensus.
tgatatggacaggagacagggaaatactgggtagaagagggtggttccccagcaaaggccccaccctcaa
gcctggagacctgcggccctaaatgggaacaggcattcctgttttcacgcccaaaaagttgccttttggc
ccaccacaccccctatcctgtacccatataaaccccaaaccccaggctccagaagcagannagcagacaa
ggagaggagcagangaggagacgagcagaagagcngcagaatagtgcggcagagaagagaaggaacgtct
gaacgccgagaggagttcrgctrgggrcrgtcagagargagntcagccgctggayngccaaactccaggg
gaagatcatcttcccactccatcccctttccagctccccatccatcccactgagagccacctccaccact
caataaaaccccygcattcaccatccttcaagtccatgtgtgacccgattcttctgggatgctagacaag
agcttgggatacagaaagctgtcacactggccctctgcccttgcaaaaaggcagagggtccactgagctg
gttaacacttaagccatctgtggacggcaaagctaaaagagyacactgtaacacatgccnnncccacttg
ggcttcrggagtcacaggcacccacccctagatgctgccatggggccagagcccaaaagcactcacccca
gctcctgcwcctgcccgtctgcatgctccccctcctgtaaggggtttgagcgtgtggcgaccnaacagrn
gagccacacccctgtcrcatgtcctgcragggggrtcagggaactctcccatttca
>MER109   Interspersed repeat - a consensus.
aaagactagatntttcanatyagaacttaannttgtccactatatacacagcantgttaaataaaatngc
acacacataacaatggttanaatctgaaatatcttctaaatatgaacattttggcctagaacctttcttt
tctcacttccttctctctgccttcaantcagtggacaagtatangcatgtgtaatgctctagagatggtt
taacaaatttatatccaaaagtcatttccagaagacaanccttnctatraantttaacaaaaagtktaca
aaaggtgctaattctactangtnctttgtcatacactggcagcctctttaacatctagagactagatgtt
gcaaaattaggactcatttgtccattatatacacnatatacaaagcaaaacaaaatgcacaanacataca
gaacaagagttcctgaaaatgtgcaattatnaacacactggcacadaaccnttcgcacttccttctctcc
canctcctctaaaccactgaataagcacagacantaatatacngctcaaagagatggtttaacaattcca
ttyccmaaagacagtntttcctrtgaattttanntaaaagtnacttaaagngtgttattttactacctct
acatttaacatacattangcacttcnraacatctagaaagactagatrtttcaaanaagnacttaatttg
tccactatatgtacagtagcattgaataaattgcacacatataacaatggttataatttgaaagtgtctt
ctaaatatgamcattctggcctaaaacccttcccatctccatcaacycagtggacaataatgctcaagtt
ttcagaagacantctttnctatganttttaangcaaaatgtacaaaattattagtttactaactctactt
ttgtcatacactggcaacctctttaacatctagaaagactagatgttgtaaaattaggacttgtttgtcc
tttatatacactatatacacagataagtaaaataaaatgcacagacataagagacaatggttaatcttgc
ctcactgtaaacacantgntggcataganctctttgcacttccttctcctgcctcctcccctgaaccagt
gcacaaacacaatgtgtaytactcaagaggtggtttggccattcccccaaagacaacatttcatatgaat
tttaacaaaaagatatttacaaaatgtattattttactacntctactttnaacatatatcaggcacttca
gaacatctagaaagactagatatttcaaaaaaatacttagcattgtcaacgatatatacagtagtgagga
ataaaatgcacacaaaacaatggttataatatgaaaatgtcttctaartatgaccagtctggnaaagaac
cttcttctcttcattctcacgccttctgctccatgkcctctaacccactgaatgaacgtggtsgtgtntg
ttgctcctggtgtcacttctagagctcgtctaacaatttcgtttcnaaaagtcatttccagaagacattt
rttttctankattttttaaaanaaaaaagggcatttacaagacgtgnnattttctaacttyttwacatat
agaagggctagatatagcaaanattttctwttaaaargttggggggnaagttgagagcagctttttcata
ttatatacncgggccttctataaacggtggccagtaaatcttcccaaagggtggtgggcatytccaatgc
gccaaatgtggcntgttattcyaccatttctctcttccmacatcaaggtctggtagaasgaaggccaacc
gcccgatggccngctaaccdttctacccgtcstygtccgggactcygctcaccttctaggccgtttaagg
cctttgtccrtcattnctggcatngtcaggactaggtamggtctcgdccaactgggacagagcggtcagc
ccgggncccgsrtytgygcrrctccrwggcmtaa
>MLT1E2   LTR from retrotransposable MaLR element - a consensus.
tgtggtaggcagaatggccccccaaagatgtccatgccctaatccctggaacctgtgaatatgttacgtt
acatggcaaaagggattttgcagatgtaattaaggttacggaccttaaaatagggagattatcctggatt
atctgggtgggcccaatctaatcacatgagcccttaaaagcagagagttttctccggctggwakcagaga
aatgagcagaaggggaagtcagagagattcgaagcatgagaaggattcgacgcgccattgctggctttga
agatggagggggccacgtgacaaggaatgcaggcagcctctaggagctgagagcggctcccggctgacag
ccagcaaggaaacggggacctcagtcctacaaccacaaggaactgaattctgccaacaacctgaatgagc
ttggaagcggattcttccccagagcctccagataagagcccagnccngccgacaccttgatttcggcctt
gtgagaccctgagcagagaacccagccgagcccacccggacttctgacctacagaactgtgagataataa
atntgtgttgttttaagccgctaagtttgtggtaatttgttacagcagcaatagaaaactaataca
>LTR22B   Long terminal repeat of endogenous retrovirus - a consensus.
tgtaggggttcagtcaggctggtgggaaaaatattagagatagttatagaaatagacacaaaccttcttg
gaaggccgggaagtttgcataacttcggtaatagatctggctgaaggcagcctaatccctttacctttag
ttaaataaattagagtagaaacaaaggaatgtagaggagtttatctagmtagcttgtttactcatgtggt
cytaagactaacctttgatctacngcaggtgcttaattgctttctacttgggaagtccacaatgtcaatt
accctctagtggtgttgactcaagcntttgtcaattaatctttactgaataaatgcgagtctcactggct
ggtcggcaactgtttacagcactctcctgggagtctgtaagcggcctggacmctcagctggactggcaaa
gcagaatatctgtgtgtcagtgtactttattcatccgtcactgggtcagggtctgtgggacagactccca
ca
>MLT1G1   Mammalian long terminal repeat (MLT1G1 subfamily) - a consensus.
tgtggcagattgtattttccaaagatggccgcaacaatatctcccatcccacatgctcttcttacaatgt
gaccttgncactcctcccatcgagnggtggggtctatgtcccctccccttgaacctgggcggacctttgt
gactgccttgaccaatagagtatggcagaagtgatgctgtgtgacttccgaggctaggtcataaaaatgc
catgcacttccgccttgctctcttgggacgctcgctcttggaacccagccaccatgctgtgaggaagccc
aagcagcccatggagaggcccacatggagaggaaccgaggctcccggccaacagccccagctgagntccc
agccgacagccagcatcaactgccagncatgtgagtgagccagcctnnagatgactccagcccccagcca
ttgagtcacccccanccgtcgagccatcccagctgacgccgcgtggagcagagacgagccgtccccgccg
agccctgcccaaattgcagattcgtgagcaaaataaatgattgttgttgttttaagccactaagttttgg
ggtggtttgttacgcagcaatagataactggaaca
>L1MCC_5   Primate L1MCC_5 LINE1 repetitive element - a consensus.
aggaacttccactttcagttctacttccacttaggatgtagaaagccacaaragaatattgctcccatcc
taacaatragaaaaaaagccagataatctacaaaatyatacttttcttgagcccatcagagagctgaggt
cacaaggcaaccaagtaaactgaattccaaagagtgacaagcccctccaaggagaracaggacacaygaa
ctgtttcacctttggcagagcataggaggaagaggtggccaccataaaagcaggtaagaagaaatcagct
aaaattttaataaattcttaaaggccaagtgtgggctagtgtgwcagtttagaaagctgggagccccaga
cacaagggaagtttgcactcacttgcaagctcttttccatgggcctccaccaggtgctcatgagaaagac
tgggggcagggcaggagactgaagaaagccctcctcagkggcacaggcatgcaggaggtgatcggctgcn
gctgggggacaggaacgaagccnncctcatnttcncagaactttcttyccyaaagcaaaagccttnngct
rctgggntgasaggnagcaaacccnnttnctcccagggcckwrgcaaaracactmtwsyttytysrgaag
mggtargagcyaaaccwtctgattctgggggaagaacagaagcaaaagccttctscycnygngraagggc
agrraacwntntyaggyncaggatnntgcantgatacaaancagaggtcwgctactactgggagaggnac
aggtcccatcccaaccacagatacaaggagagtttgactgccatggagagaggggcaggaacactgagaa
agccccactcctgaggcccaggcgcacagggcctgcctaagactgaggctggaccaggacaacagagaac
atccctnctcccaccacaagcctaacaagcaccaagtaacamagcaacagcagtctaccactgggggagg
gnnannannatggagagagactccctctgtggcacaggtatgcagggactactgaaagctgagggtggag
caggaacactgagaaaaaccctctagcaaaccagcccccacactaagcacaaggtaacagcagcccacca
ctagaggaatttgaagcctgtggtgcactgarggtaaccatagcaacaacaaaacccaaacccagctcaa
ctcctgactagattgactcaacccccacactaaaagcctagcagaagaaaaggcatgcccatttccaggc
ataaatactatttacctcagtctctactgttcttctacacataatgtctrgcattcaataaaaaattaca
agacananaaaaaaagnaaaaaaaaacaacccattgtcaagagacaaagcaatcaacagaaccagactca
gatatgacacagatgttggaattatcagacaaagaatttaaaataactatgattaatatgttaaaggatc
taatggaaaaanggtagacaacatgcaagaacagatgggtaatttcagcagagagatggaaactat
>MER110   Putative long terminal repeat from endogenous retrovirus.
tgaaaactgaaaccaacataatttcctgtccctgdgttaaacaatactgggaccaggcatacttttctgt
tcctatgttaaacaatactgagaccaagcaaaaataacttagctacttgctccaggaaatacytgctcct
ggaagataagactgtgaaccaactaaaatagcttacttatcaagactaacagcttactcatcaaaactcg
tttcaagaccctcgcctcactgtgcccaccaatccaaagctattatgtcataaactctgcccaatcccaa
ccagttccccgccttgcaagacccaccttaaaatcacccagcccaggccctaaaaccctataaataatcc
tnccctaatttttccattttgagacactactaagactctgtatctatgtcaaggtgatgttcttccttac
tgcagtaagtctaataaaaactcagctttgcttgatcaacaggttttnttttctggtggtctttttgggg
agycgacagt
>HERVK11I   It is flanked by MER11 LTRs.
[encoded data, 8023 characters]
ccttcatcgccatggcacatttatataaaaagaaagggagaga
>HERVK14I   flanked by LTR14A and LTR14B - a consensus sequence. 
[encoded data, 6030 characters]
>HERVK13I   Human endogenous retrovirus HERVK13, an internal portion.
[encoded data, 8232 characters]
>HERVK14CI   flanked by LTR14C - a consensus sequence. 
[encoded data, 7523 characters]
>LTR14C   LTR of human endogenous retrovirus HERVK14C - a consensus sequence.
tgtgggaaagagagtttctggggtgccagttgagttggtctcccctgtgtgagacacccatgggaagcca
tgggcggcctctgaggagaaaagtctccttattgccttcatgtctttatgccccgagagcataaccgctc
agcggcattccacaggttgctcagggagataacactcccttgaagcagtggagtataatcaaacatcttg
gctcctcctgaaacccactcccacccgtttcagtcccgataagttaaagatcttaagtagtttagacaca
cgcctttgctcaaggaaattcacagaaaccgccactgctacacatcttatcgaatgactcacgagttctc
cttcactgattaatccttttcctcatcccttcctccccctcccatctgccctaagaacaaagagcttgta
aaccaataaattgggtggagcccaagagctctgggccgtgagcaagcctccgatgctctggtcccctgga
cccgccttttaaacgcttattctgtctctttctaactcctttgtctccgccggactcggggtacccactg
ggtggtgtggggctggtttccccaaca
>LTR61   LTR from human endogenous retrovirus - a consensus.
tgaggcagaaatttaaaaataataataagtactgcattcattcactccaagaaaagtaaaagccaaggcc
cagaatgtggcaaggcaagggttaaaaagaaaaaaaaaargaacaagttttcctctgcctagccaagctc
acttcaaggacagttataagataacgctgtycgaraagccaaggccaaaggaatgggctccagacacccc
cccacctccagagcaaggttgaaggaaaaaaagagaaagacaaattcctttactgttactcctttccctg
gcntcttaagcatgactatgttttacaaatgtctgtatttagccagttcttgtttttctttygacgcagc
tacaaggccaccagctatgcaaggccacaagttatgttatgctatagattatgtgacctgtcactgtatg
attaactgcctttgttttgcttttgtaagcctgcttataaaaaccccrctctgtctttgttcaaggctca
gctttttggatgtgaatccactgagctggtgcgtaccttaaaataaataacaatcctcctgtattcaccc
atattggtctctctagtcctcagtttcccrcaaca
>HERV49I   Internal sequence of primate retrovirus-like HERV49I - a consensus.
[encoded data, 6390 characters]
gtgaaactttttaaagtttcaaagtggggac
>HERV15I   a consensus sequence.
[encoded data, 8804 characters]
aatagtggtgctttctattaacatctttgttttaaaaagcaccaaaggggggaaa
>LTR62   Putative LTR from human endogenous retrovirus - a consensus.
tgtatagagcacccttgacataagtaactccatcttagaaaaagactccatcttacatttcaaaaggcat
cttgccaacagggaccagatgttttgcctaatcaataaagactgcayccaaccagataaggacataaaca
agcacactcttccactatcagtcctcaccagaggactctgtggccataaaaagagcaggacttcaccagc
tcaaaatggccatcttaacagacaccgtcttgctgtcacttgtgataagcacccagcatctgccaccaaa
ggctctgcccacatcaaagactcttccttgcaagacantgaggctgacggactgcctggatcaggccagg
acactctttttgtctacgtcactctccctggactggttcgttaaccctttttcctatcccttttctcttg
atgttaaatgttactttgtttgttgtggaatgtttaatctataacatttatatattgattaagtatacta
ttatgtatggtttgcaatattgactgacttgtggagtggcttgagcctgtgtgcccatggctctgactac
cgagtgaaygggaagtactaaggagaattgcctccttgggaactccatgtagctcgtggcttttgtgatt
gaaatagcatcaataaaagtctgacattgtggaaagacacaaanatgtgtggacctggttatctctgacc
ttgcrctgctcacgacaca
>LTR64   Putative LTR from human endogenous retrovirus - a consensus.
gtgagacaaagtaacaaatgtaagaagccatgtctgctcatttctgcttgccaacataatttcacaaagc
ccctgactctgtgatgacatgcagctctcnagaaagatgctttgaagacaaarcaggatrgagcacacag
ccccccayrtctcttgcctgagtcactayattccttaaaagataaatgaccctagtccttgccttttcct
acacagaagataatgtctgacagggttagtgattatgcctctgtaatctataaccagatgtactcttaca
cccaaactttgatgtgattctgctctaatgtaacttctgagcaagtttgatgtgattanttctngcaagt
ttgatgtgattttgcacgtactgaacctctaccacctgtatataagctgtgggctgaaacactgttttgg
agcagtctgacagaacctctctgaaagactgctcccaggctataggcntycctcagtctacagtcctcag
taagacttctgaataaaactaactttaattctttaaaagcttgatttttttntttctttagttaaca
>MER112   Interspersed repetitive element MER112.
tccagaccagtggctttcaaactttttttgactatgacccacagtaagaaatacattttacatnatgacc
cagtacacacatacatatatataactgaaacaaaagtttcataaaacaatacttacccttactatatgta
atgcactctgatattttctattctattctattctattttattttttttaaaaaaaaatgctggttataac
ccactaaattgatttcataacccactaatttttgggtcacracctgcagtttgaaaaacactgctctaga
a
>MER113   Interspersed repetitive element MER113.
tttcccaaacttcagtcattttcataccaccttcatgatttttgccatatctatataccacctgtactat
ttatttacttaatttttctttaaattgactcactttttttatttaaataaatttattttaaaaggaaact
ttatatcactaccataaatggaaaaccagtatcacttgccataaatagaaggtaaccataaaaataaatt
acaatgaaaacaaaacaatgttattaaattctagctagatactgttgcctgcctactgcaaggctctgag
cctgaggcctgctctctctttgttaaaaagagagattagcaagtgttagagaggtgttaaagacatacta
agcaccaaactgagactttctccttgatgtaatcagaaggattgaaagagaattgaaaagggaataactt
tctcactatgtgattcaatgttatttaatgccatatccatgtnctacctaaaatcatctttaaataccac
cagtggtacatatcccacactttgggaaa
>MER110A   Putative long terminal repeat from endogenous retrovirus.
tgagaactgaaaccatctaccacccacacagcttactgactgtctacattaacatgactttactattcca
ctgtcttcatcaacataactttactattccaggaaactcttgcccaggaagataaaagttgcaaataact
ttattgttcatttcaggaacttcctaaaaaacccatcaactcttcaatagaaagcatcaaacgacagttt
atccccaagactctttgaaacccttgcctcaaaaccctcaccttgctgtgtctgtgtccaccaatcctaa
actattatatcatgatccttacccaatcctaatcaagcccctacattgaaagacctgccttaaatcagac
tccaaaatctcaataaatatcctgactttgccctccctcctctgagacactactaagactctgtaaggtg
gtgctcycccttaccacagtaagcaataaactcagctttgtcttatca
>LTR33A   LTR from endogenous retrovirus-like sequence (HERVL33).
tgcctatttgctctcagatccatccctgcccttytcctgctctgctctntatcacaggaactgcatttcc
caggctcctttgccacctggcttctaggtaggtttggccaatnggaggcactggcngnaggagattagag
ggcaggaggaagggagaagccagggtatttctccccctccctctctgccttgggcagtantctctctagc
agcagttgcatgcatctcctctgtggttccagctcctaccagacagccccnccctctgtggttccagctt
ctaccaggtggccctggctcctgggctctggtaattccacctcctccctccctttgtccctccagcccta
ggggtggtagtagcttcttgctgttgctaatctctgggttgcctcaccattgnttccctgtttggcttct
cagctctttcatcacctgtgtaaccaattccctgtattaaattccctctgtttgaaatacctagagtggt
ttctgttttcctgattggaccctgactgataca
>MLT1F1   MALR long terminal repeat (MLT1F1 subfamily) - a consensus.
tgtggtggttttaaaatatgtccacaaattctttgatactccttccttcaagaggtggagcctaattccc
ctccccttgagtgtgggctggacttagtgactcgcttctaatgaatagaatatggcggaagtgatggtgt
gtgacttccgagactaggtcataaaaggcattgtggcttcctccttgctctctctcttggatcactcgct
ctgggggaagccagctgccatgtcgtgaggacactcaagcagccctatggagaggcccacgtggcgagga
actgaggcctcctgccaacagccagcaaggaactgaggcctcctgccaacagccatgtgagtgagccatc
ttggaagcggatcctccagccccagtcaagccttcagatgactgcagccccggccgacatcttgactgca
acctcatgagagaccctgagccagaaccacccagctaagctgctcccgaattcctgacccacagaaactg
tgagataataaatgtttgttgttttaagccgctaagttttggggtaatttgttacgcagcaatagataac
taataca
>SATR1   Primate satellite-like sequence - consensus.
agggagaggatgatattactcccaatatcacagggggtgtacaccccccctgtgatattgttcctaatat
ccagggggggagaggatgatattactcccaatatcacagggggtgtacaccccccccccccccccsyaca
ccccccctgtgatattgttcgtaatatccagggggggagaggagaggatgatattactcccaatatcaca
gggggtgtacaccccccctgtgatattgttcgtaatatccagggggggagaggatgatattactcccaat
atcacagggggtgtacaccccccctgtgatattgttcgtaatatccagggggggagaggatgatattact
cccaatatcacagggggtgtacaccccccccstacvcccacmccccctgtgatattgttcgtaatatcca
gggggggagaggatgatattactcccaatatcacagggggtgtacacccc
>MER115   Non-autonomous hAT-like DNA transposon - a consensus.
cagtaccgcccttagacctgggcaagaggggcccctgccctgggccctgcgctttagagggctccgctct
ggccctcctccggcgcggcccttccccacggggcgaggagtccgcggggccaaggggacgtgcccacccg
gagcccatgcccccccttctagaccacgctccgggtacccgggaccccggaattccctgcccaaatggcc
ccgagcccgcttccagggcctgcgcgggcctcttccctgggtccgtcctcccaagggcggaccgcgccgc
cggtgtgtgcacccctaggcccgaggggtggccaaggggcggctgtttgcggggggtgtggacggagctt
ggacgtgcgggctggggtgtccacatgcgtgcacgcgaggcccctcgcggtgcaggacggagccgggggt
gggaagagaaggggagtaggccacgggccaggggctggctctccccaggccgccacgttctggcatggaa
ctccgaggagtccgagaattctaaattcgaacctggccttccaggtcgttatgaaggtatatttgtcaag
gtaggaggatagaacatattttatttaacagtttgttagcttgatttataacttttaaatatttagacat
atggtatgtgggcctccatttgtactcttgccccgggccccgcaaatgttaggggcgggcctg
>MER116   Non-autonomous DNA transposon - a consensus.
tattaggttgaaccatatgaaattgctaatattcgaccatttttgacctacaaaaatggcaatttcatat
ggttcaacctaata
>MER117   Putative non-autonomous DNA transposon.
cagggatggcaaataggtttcatctcatgtgycaactctgatcgattggtagtggctgcctggagtgctg
tgttgagaaggattctgaggctgyatctgggctcagtgggaaagagtgctgtgattgattagtgatgtct
gccatgggcacaggagggggaagtagcagcanatatgctatgtatttgccatccctg
>MER20B   Non-autonomous DNA transposon - a consensus.
cagtggttctcaactaggattgtattaccccctaggggacatttggcaatgtctggagacattttttggt
tgtcacaatgattgggggggrtgctactggcatttagtgggtagaggccagggatgctaaacatcctaca
agcantgcacaggacagtcccccacaacaaagaattgtcctgcatcccacatgactttcaaatgtcccac
tagacattcatgtaggtgaaaaaacctgtttataattatctgagcctagaacctaactctgttttacata
taaacacaaagtattttttgcatagttttaatatacactgaattttctaggaatgcaactacvattgtat
gtaaattgagggaagattgtactttgttttgtttagaactttaccaaagagttgttcaccattttggaaa
atcatatcactaatggncaatactcgctcatggtatttgagttgccaatacaacacacctgtatcagtct
gcatttgtagctgtcacattcacggtgattctatngtataggtgcaagcatctgactacttcattatgtc
ttctagtgtagtcatgcctgagcatttacatattgaaatacatattattttattataaattactttcctt
ttttctcttttatattacagttagagcattatattgattttttttaaaattaatgtgtataggtaggtta
tattatctatgaatttcatttcaggataaataaaagaggcattacaaaatatttgttataaaaaggggta
ttgggtctgatagggttgagaaccactg
>LTR65   Long terminal repeat - a consensus.
tgagaaagtaaaaatctgccctgccattcatcaggctgggataacagacacagataaagccagctgcaaa
gtataacaggaaacaatatttctcccaaggacatactgcagctgtaaagtgtcataacaancctccttct
ttgagtgactactgctttcttactcactgagaaaccttgttctctaaaatcatagactatcagaaacttt
gctgtttgaaattatatcagtaagaatgaaacatcccactcttgcctggaggatctaagtcactttgaca
cagagaagcagcctcaatttccaacccaggtgcagagcttcagataaggggtttctggacacaacattcc
acatttatcttaactttgtagtttccaaggaaacaggaccctgggtccactttgcagtccaggacctgat
gttgacccctttacacacagccctgctttgctttgagcctatcannntcaaaacactgcttcatttaaat
ttcacctaaactccacccttcccccaaatcctataataactctatcttttcctttgtttggtgagatgct
ccatggttcctctggtgtgcagtctccctcattgcaataagtcaataaacctgactttgttggactacag
gtttgtccctggtggtcttaggctgattgggctaggaca
>LTR38B   Long terminal repeat - a consensus.
tgtaaccaggcagcttarcttcaaaatgcattttaaaacttttttttccctttctcttgagtttcaagat
ataaccttgaagcaaactgcagaagccttttctcttatccttaaaatagactccanatccctccctttct
caccgtatatactcccttcacatttatctaactgtatgctagtatctaattatgtgcttacttagaagtt
ccaggggctaatcttgagacagacagaccaagcctggagacccagctgcaaaattccagagattacytca
aggcagctagtcaacaaccyrgccattgttgagatgaygccagcccacastccaggtggactgggaccca
agatagccaccggaaaaagacacacagacnttgtactcagcacaattcttgcmagcacantkngnaatgc
ctyccwtatcaagttttccctttttaaacccttgccttcyccctaaaarttgaagyggttgctttggata
ggaatcyggccrcttccccattactagttttggttaataaagtcactttctttctacyagacctcactct
tgtcaattggactctgyaagcagyragcagccdgacccatgtcakttaca
>CR1_HS   A CR1-like fragment from the human genome - consensus.
gaggttcaacaaggccaagtgcaaagtgytgcacttgggttggggcaatcccaggtatrtatacaaactg
gggaactatgagcttggcagcagccctgtggagaaggatctgggggttctagtggatgawaagtttaata
tgagccagcagtgtgctgttgctgccaaaaaagccaacagtatcctgggctgcattaanaagaggattga
cagcagatcamgggaagtgattatacccctttacaatgccttggtgaggccacatttggaatactgcatc
cagttttggtcaccccaatrcaaaaaggatgttgagactttagagagagtacagagaagagcaacaaaga
tgatcagagggctggaggacctaacctatraggaaaggytgatggaattgggcttgtttagtttgragaa
gagaaggatgaggggagacatgatagcagcctt
>L1ME4   3'-end of L1 repeat (subfamily L1ME4) - a consensus.
tttggcaatatctatcaaaatcacacatacatttaccctttgacycagcaatcccacttctaggaattta
tcctacagacatacttgcaacatgtacaaaatgacatatatacaaagttantttattgcagcattatttg
taatagcaaaaaaytggaaacaacctaaatgtccatcaataggaaaatggttaaataaattatggtatat
ccatacaatggaatactatgcagctataaaaaagaatgaagaagatctctatgtactgatatggaatgat
ctccaggatatattgtttaagtgaaaaaagcaaggtgcaagaatagtgtatatagtatgctaccttttgt
gtaaaaaagaaggaaaaataaaaatatatatatatatttgcttatatatgtataaaataactctggaaaa
ataaacaagaaactnataacagtggttgcctcttntggggggaggggaactgggnngntgggtggctggg
ggacatgtgggatggacagggatgggagggactgacttttcactgtatacctttttgtactttgtacttt
ttgaaattttgaaccatgtgaatgtattacctattc
>MLT1H1   Mammalian long terminal repeat (MLT1H1 subfamily) - a consensus.
tgtggtagattaaagatggccgcaaattwtttgccactcttcccattgagaggtggggtctatgtcccct
ccccttgaatctgggctggccttwgtgactgctttgaccaatagaatgcggcggaagtgacgctgtgnga
cttccgaggctaggccataagaagncttgcagcttccacctnggtctcttggaacactcgctctgggagc
cctgagccaccatgtaagaagtccgactaccctgaggccaccatgctggagaggccacgtgtaggcgctc
cagtcgacagtcccagctgagcccagccttccagccatccccaccaaggcgccagacatgtgagtgaagc
catcttggaccctccagaccagcccatctgccagctgaataccactgagtgacctcagtcaatgccacat
ggagcagaagaatcacccagctgagccctgcccgaattcctgacccacaaaatcgtgagatataataaaa
tggttgttgttttaagccactaagttttggggtagtttgttacgcagcaatagataaccggaaca
>LTR2B   related to HARLEQUIN - a consensus.
tgagggaagagagagaccctctcatattgttttatattgttttatactcagtacctgttttaagaaaaaa
agaaaaaacaacaaggaagtaaaaccaaagacaggcagcccggcgccaggcccgaaaccaggcctgggcc
tgcctggcctaaacccagtagttaaaaatcaactcatgacttagaaaccgatgttattcatagattccag
acattgtatagaagaacattgtgaaactccctgccctgttctgtttctctctgaccaccggtgcatgcag
cccctgtcacgtaccccctgcttgctcaaatcaatcacgaccctttcatgtgaaatctttagtgttgtga
gcccttaaaagggacagaaattgtgcactcggggagctcggattttaaggcagtagcttgccgatgctcc
cagctgaataaagcccttccttctacaactcggtgtctgagaggttttgtctgcggctcgtcctgctaca

>MER101B   A subfamily of MER101, putative LTR - a consensus.
tgttaaagtatgcccctagctgacagacaaaatggactccctgtggctaamtgaggtgctcaaagttaaa
acagaaccaggcagccatggctgggtgagggagcagtcacatattctgtgttctcagaaagatgtaaaag
tntcacaggacctccctttctacaatcaagccaaaccagttcctattgtyagtgccaagataaactgcng
ccagaaaccacctccccacaagcccactagaaacaaacatctgacagagacttctgatttggggcttgga
aaccaaccaatcagagctcacctaccccagccaatcagggctcagctgtatcgaycaatcagaactyagc
tgnnccaaccaatcagaactaagcaagtttcaatccttcatttgcataaatgracctgattgggaacctg
ggcaggaagttttgctataaaacccaaancttcctttgttctccggaaagcaccttcattttacactraa
ggctgtgtctccctggtttgcaaactgttcactggaataaactctcctccaaattccttttnagagaact
tttgttcaca
>MER45R   Nonautonomous hAT-like DNA transposon - a consensus.
cagggccggcttcatgggcgtgcgacctgtgcagtcgcacagggccccgcgctcagaagggccccgcgct
tggtttaatgctctgctgtcgccgtcttgaaattcttaataattttatctttgaacttgtgttttgtaag
tgaagtccgatgggacaatggagcatgcgcgtgagcagaggagatacgccgggcagcagcgcccacggcc
tgtgggggctggcaggcagtgtgcatgccaccaagcagttggccgggccgcctggtgtgcacgacacgcc
ggggcagtccggggcacckcggggccccgagggggcaggccaggaccagtgnctacantggcggcggcag
caaaagcagcagcagaggtggcagcggctgcagccctgggagagangagggcctccatgcagggacagtg
angagacccgtcgtgggaggccagcttgtcctgtcaccggccatctgcgcaaatatcaactcnccggcct
gagtgctgggacaggaactgccggcgctcaggcagtaaactttgtcagtaaattattacaaaataaaagc
atacacatggacattgcaataaagcatatcagggagttgttagaattcttcaaagagtttagaatctccg
gttttgaaaactgctgcaacattgcaaagcaaatatccacaggcttagaaatagaaattaaatttaaaga
tcgtcgcattcgacggaaaagaacactattttcatgtgaagcttcggatgaaccaattattaatgaggaa
gacaattttaaaattaatttttccttataattgaagatacagcgatagaatgcataaacagacattttga
attatatacaaatcatgaagccactttcagtttcttgtacgacctccacaagttacaggaaatgtcagag
gaaacattaaaatgccattgtataaatttacatttaaaattaaattcagacttacacaaaactgatttgt
atgaagagttaaatctttttagaaaaattgttccacaagaatcatcagctctagatgtactaaaatttat
attttgaaataatttatcanaaatntatcctaatgttgtcatagccnataaaatactcttaacagctcca
gnaacagttgcatcagcagaaagatccttctcaaaattaaaaattataaaaaattatttgtgatcttgca
tttgccaagagcgantgacgtcgctttcaattatatcaattgaaaatgaagttgctaaaagtataaattt
tgatgacctaataaatgaatttncagaaaagngagccagaaaaatcttatgatcaatcaagatatcacat
taataaagtattattacttattgtattatataaaattatgacaccaaaatattattttttgcaatttgta
agtttatgttgttattcatgtatcactattacccctattacgttttataagtaataaaatattttagaag
gaaaagctttatattttagtacctttaatggcacttttttcctgctttttgaacaaggggccccgcattt
tcattttgcactgggccccgcaaattatgtagccggccctg
>MLT1G2   Mammalian long terminal repeat, MLT1G2 subfamily - a consensus.
tgtggcgatttttaaaacatggccgcaaattctttgacactcctctcattgagangtggggtctatgtcc
cctcccctttgaatctgggcgggcttgtgactgctttaaccaatagagtacggcggaagtgacgctgtgt
gacttctgaggctaggtcataaaaggcgatgcagcttctgccttgttcgctggaacacttgctcttggag
ccctgagccgccatgtaagaagtctgactaccctgaggccgccatgctgtgaggaagcccaagccacatg
gagaggccacgtgtaggcgctctggtcgacagtcccagctgagcccagncttcaagtcatcccagcccag
gcgccagacatgtgagtgaagaagcctccagatgattccagcccccagccgtcgagtcacccccagcctt
cgagtcttcccagctgaggccccagacatcgtggagcagagacaagccatccctgctgtgccctgtccga
attcctgacccacagaatccgtgagcataataaaatggttgttgttttatgccactaagttttggggtgg
tttgttatgcagcaatagataactggaaca
>MSTA1   Long terminal repeat - MSTa1 subfamily - a consensus.
tgctatagtttggatatttgtcccctccaaatctcatgttgaaatttgatccccaatttggcartgttgg
aggtggggcctagtgggaggtgtttgggtcatgggggcagatccctcatgaatagattaatgccctcctt
tgnggtgggaatgagtgagttctcactctattgtgggaatctattagttcccataagagctggttgttaa
aaagagcctggcacctncctcctctctctctcttgcttgcttcctctctcaccatgtgatctctgcacac
gctggctccccttccccttcaccttcygccatgagtggaagcagcctgaggccctcaccagatgcagatg
ctcgcaccatgctttttgtccagccagcagaaytatgagccaaataaacctcttttctttataaattacc
cagcctcaggtattcctttatagcaacacaaaatggactaagaca
>LTR6A   LTR from retroviral-like sequence S71.
tgtgataccctaccttgttttaacntgaatngactctcccttagctgagaaagccggacggactccattt
ggctccttcatttgcaagacatcaagggctccttacccacccccttcctcaaggacttaacttgtgcaag
ctgactctcagcacatcaaagagtgcaattaactgataaggtactgtggcaagcnatgtccgcagttccc
aggaattcgcccgggtgatagtaccctaaagcccccgcgtttgtgtccggcagatagcacccagagcccc
cgcacctatcaccttgtgatgaatttaaagcccctgcacctggaactgtttgttttcctgtaaccatttg
tctttttaacttttttgcctgttttacttctgtaagattgctncagctaggctccccctcccctttctaa
accaaagtataaaagaaaatctagccccttcttcggggccgagagaatttcgagcgttagccgtctctcg
gtcgccggctaataaaggactcctgaattcgtctcaaagtgtggcgtttctctataactcgctcggttac
aaca
>L3   Human LINE3 element, 3' end - a consensus.
aaaatgggcgaggagacttaagaaancctgatacgttcaagtcngcaggnccngacggctcgcatcctag
ggtactnaaagaatttgcagatgtcatcgcagagccgctagntattatctttgaganatcacggaggagt
gaagaggtgcctgaggagtgcaaaagggcanacgnggtgccttcttttaaaaagggaaaaaagacgaatc
ctggaaactacagaccggtaagcttaacnttgatccctggnaagatnctagaacaaatcattaaacagat
ggtttgcgagcacctagaaggggagcagaaatcactaggtagcaaccagcatgggttcattaagagcaag
tcatgccaaactaanttnatttccttttntgatagggttactaagagggtagatcaggggaatgccatag
atanaatgtatctggatttcagcaaggcatttgacaaagtctctnatgatatccttgtggacaagatggn
gaaatatgggctggatgntagnncaattaggtggattcatagctggttgaacaactatacccaagaggtg
ttgattaatggatcgatgtcaacctggagggagatctctagtggagtgccacagggctctgtccttggcc
ctgtcctgttcaacatttttatcaatgacttggatgaagacatagaaggcatgcttatcaaatttgcaga
tgacacaaagctgggagggatagctaatacgntggatgacagaatcaagattcaaaatgatcttgacagg
ctggaacgntgggccgaaaccaacaagatgaaatttaacagggataaatgtaaagtcctgcatttaggtt
caaaaaatcaactgcacaagtacaggatggagaggatctggcttagcagcagttcacgtgaaaaagacct
aggggttttagttgaccacaagctcaatatgagccaacagtgtgatgtggctgccaaaaaagctaatgca
atcttaggctgcattaatagaagtatagtgtccagawcaagggaggtaatagtcccgctgtactctgcgc
tggtcagaccacatctggagtattgcgttcagttctgggcaccacattttaagagggacattgacaaact
ggagcgcgtccagagaagagtgaccaggatggtgaagggtctggaaaccatgtcatatgaggaacggttg
aaggaactggggatgtttagcctggagaagagaagacttagaggagacatgatagctgtcttcaaatatt
tgaagggctgtcatgtggaagagggattagacttattctgtgtggctccagagggcagaactaggatcag
tgggtggaagttacagggaggcagatttcagctcaatataaggaagaactttctaacaatcagagctgtc
caaaaatggaatgggctgccttgggaggtagtgagctccctgtcactggaggtattcaagcagaggctgg
atgaccacttgtcagggatgttgtagaagggattcctgcattggatgggagnttggactagatgacctct
aaggtcccttccaactctgagattctgtgattctatc
>LTR66   Long terminal repeat from endogenous retrovirus HERVL66 - a consensus.
tgtggaggaaaagttaaatattaaatttgaactcaattgaacatggacacaaacaatggtcaccaagtcc
tggaacaggttgtgtgagccccttgaggcattcatccagcgctgtttcggagaaatctctatttcaatct
attcctatacattagttattgaaaaacaatagacaatcacaaaaacaagttgacctttttgtgttccttg
agcccagtcgtgaagggccctcgtgactgggcctcatgccaaacaactcgttacaaaaagagctagggtc
ccagactgcrccraagcttcatgagacctctcctcgtctgtgcacggatgagtggccgactctggagccc
aggctgttgcttcccagtctggtggtgaatcctccatagtctggtgagtgtaaatatatatatatatata
tatatacatatatatatatcttttcccttctccccttcccattgcaatttgcttattatatcaatttgct
tattatatcatttgcttattatatctgcattgccatttacgtgggataaagcttgtttacccttaaaggt
attgtgtgtgtgtcttttcttctcccctcacgcgtttcccgcacagaaca
>PRIMA41   a consensus.
[encoded data, 7810 characters]
cgtccctctgcaacccttaggattaagggtcttcttgtaaagggaggggggagata
>MARNA   Human non-autonomous mariner-like element.
tgggcacgtatacgaggtgtgactataaagtaatgaggctgatttttaaacaaacacaccagaacttata
cgtccaaatgagtgttgtccttcaaagtagtcaccctgggaggctgtacactcgttccaacgatgctgcc
antgctcaaaacatttctggaactnctcttttggaattgccttcagagccagtttatgagccacataaga
aaatcagtctcattactttatagtcacacctcatttttgaccnaaaatagtattacccagcttgatcacc
caccttattcaccagacttggctctgaatgacttttggctgtttccaaaaatcaaatccaccctcaaagg
atgaagatttgccaccattgaggatattcaaaagaatgtgccgcaggctctgaaggcaattccaaagaga
agttccagaaatgttttgagcaatggcaacatcgttggaataagtgtatngcctcccaaggtgactactt
tgaaggggacaacactcatttggatgtataagttctggtatgtttgttwaaaaatcagtcncattacttt
atagtcacacctcgtntacgngccca
>MER119   Non-autonomous DNA transposon.
ccgcggttcccaaactgtgcgccgaggcgccccggggcgccgcagcgaactcacaggggcgccgcgggat
attttaaattttcgagggaaacacagcgatactcgacatctgtcggacaccgcgcgaactactagctcga
ggtagttcacagtttcaacattagatcgcgctacattcctttcgatgacgtcatatctttgcgaagctgg
gttttcggcggttgctgtgataaaaagcaagtaccgcgcgaaaatcaatgtggaacaggaaatgagggtg
gcagtgtccaatctgattccaaggtttgagaagttgtgcagtgcccaacaggcgcacacatcccattagt
aagtaattgtggttatttaagaatgaaataaaatattattttttctttcaatttatgtgtattatttttt
caaatggctactaagttgttaggacataaatacttattaagttgtttggacctaactacttaataaacgg
aactgttaggtatttcttttggcctaggggcgccgtgaaaaaattactgagacactaagggcgccgtgaa
ccgagaaagtttgggaacctctg
>LTR67   Long terminal repeat - a consensus.
tgtggacatttgtcattctttttggccactcagcatctgaacacccttcctatgtttggggaattccccg
cnttatgaatcccacctccccaaggtagaagccagaaactcactttcccagcctcccttgcagctagggc
gcnggcacgtgacctaggctccgccaatcagatgcgcccacncgagacttcgaatcagaagctagtgacg
caaggaagcaggnaccgcgtggaatccattctctggcgagagtggcagcagctggcatcnagtttccaga
ggcagcagtggcagagntcctagcggtggcgtccagcgctcatgtgtggtgcaagctgcggtatctgtgc
ccagcggtggcagcagtggtgtcctcactggaccagttctgcagtgtgatttgggcattgttcctggctg
cgtagcctccgagcctggttctccagccctcccggagattctgtgagctacccaatatcctttaataaat
tccttttctgcttaaatcagccagagttggtttctgttgcttgcaactaagaaccctgactgataca
>L1M3DE_5   L1M3DE_5 LINE1 repetitive element - a consensus.
cttggcncttaattcaccanctctgggagcagaggggattggacatatgagtctctctggaccacaggaa
aaaggnagtgttttatgcaagcaggcaagcacttccagaggcttcatcccccaggagcagtgcagagaag
gggctaaaaaatgcagctccctgtttctccctggaaggggtttatgacacactcttccagcggctacttg
gcggccnggcttctaactaacttgcatcggggagttaaagaggcaggtaantantaacctnccgncagcc
tgaaaagnaggtgggcactccccangccttcttccccggctcgctccagcgataantccaggcctatnaa
ttcctcctggaaggagtttgtccacacattgagcgccccaacttttacagcttccacccgagggactgna
tcctaaatctcctagctctgggagcagaggggactaggcatatgcgagtctccctagaccacagagaaaa
gtggcggttttanacgggcacgcgagcacttccaggggcttcatcccccnggagcagtgcagagaagggg
ctnaaaaaatgcagctcccngtttctccctggaaggggtttgtgccacgcatcgagcgccccaactttta
cagctnccacccgagggnctggctcctaaatcacctagctctgggagcaaagggactaggcatncncgag
tctccctagatcacagaacaaagaggtggttttaaacgggcgtgcgagcacttccagnggctacancccc
tnggatcagtgcagaaaagggcnagaacgcccagctcccantttctccccggaaggggtttgccgcacac
tcttccagcngctacctgagggcctggcttctaactagcctgcatctgggagctaacggggcagataaac
aagtagccctccggcagcctgagcgagagcttggcacttcctgngccttcccccccggctcgctccagng
ataaatccaggtctacagattctccctggaaggagtttgtccatgcaccgagcgccccaacttttacagc
tcccacccaagggactgnctcctnaatcacctagctctgggagttgacggggctctgcattcctgagtnn
ccctagaccacagagaacaaagaggtggntntacaacgggcncacttccagcagctatctccccaggatc
agagngtgcagcctgaacangagtacaggcatttgccacagatcctctccccggcttagtgcagagngag
tgggagataaacncccgcnctcagcttcnccntgagganagaaggaactggaacacacatccaacacccc
aacctttccagctgcatctnaagagnctggcttctatctcaccngtctcagggcactgacaggacntggc
acatcctaatctccngggggccaccaagaacaaagacagcagtctggacaagcacaaagatttgagaggc
accttagaatctctggccgggcngattggtgagatccntctcctacacgaggccagtctgacaagactgg
gagaggtggttgtcttatctaatgcgcagaaaccaacacagagagtcaaggaaaatgaagaaacagggaa
atatgttccaaataaaagaacaagataaatctccagaaaccgacccnagtgaagtggagatatgtgattt
acccgacagagaattcaaaataatggtcataaagatgctcaccgaggtcaggagagcaatgcaagaacaa
actgagaatttcaacaaagagatagaaaatattaaaaagtaccaaacagaaatcataganctgaagaata
ctataactgaactgaaaaattcaatagagggattcaacagcagactanatcaagcagaagaaaggatcag
cgaactcgaagacaggtcactggaaatcatccaatctgaggagcaaaaagaaaaaaaaatgaaaaagagt
gaagatagcttaagggacttntgggacaccatcaagcggaacaacntatgcattatcagcgtgccagaag
gagaagagaaaaaggagaaaaggnccagaaagcntattcgaagaaatagtgactgaaaacttcccaaatc
tggggaaagaaatggacatccagatncaagaagccca
>RICKSHA_0   RICKSHA_0 repetitive element - a consensus.
gggtttggatcataatcccaaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatccctaaagtctaaaatccctaaagtctaaaatcccaaaaattcacacaggatggttgcatcat
gttaggcagaactgttattttcttattgtctttatgcagaaaaaatggattttaattgaatccccaaacc
ataatgacagatttggaattaggtgcgatcaaggcttctaaaagtgaatttcaaggtgttaccaataaag
tttgtttttttccattcagcccaatgcatttggtggaaaattcagatgagtggattggccatgcgatacg
gcaacgacgaaaacttcagtttaaaaatgcgtcatttgcctgcattggcattccttccagctgatgacat
tccgggagcttttaatgaattaaagccgcatttgcctgaagaagtcagcgaagttactgactggttcgaa
aataattatgtgcacggtaggataagaagacacttacacaacggtgttgccgttcgattaccagtattgt
ttctaccaaatttgtggtctgtatatgagtgcatgcagaatggatttctatatacccaaaacaacataga
agcatggcacagaagatgggaaaatttaatagggaatgctcatgtcggtgtatatcgaatcagaagattc
aaaaagagcagcgccacgtagaaaatgaatgtgaacatattctccgaggagagccatgtcctaaaagaaa
aaaaaaagcagctattcatcgcgatgcaagacttcaaaatatagttaatgatcgtgaaagtcggccagct
cttatggactatctccgtgcaattgcccataatctatccctgtaatatactttttcatatgtcgaatttt
ctttttagttttttttcactattttaaattgtcagcattattttttacaattcgctatgctatgtatttc
atcttcgcatcatttccaatactggaggtataaattgtgtaaagacttttagagagttctaattcgtttt
atgcattttttgcaaatttgactccacgaaagtgcattatcacaacgttgactttgtgtgtaagcattgt
gcgtgtacgtaaaaacgttgaaacttcctcaataaatgaagagatgtcctttttgtacatctgcatttgt
gaaagataaaatttctcgagatctcggctctttgggcgactgcatatgcagtggtgacccatcgcggttt
ttgatcgatctcgtcaaaagacttaggttgttcgtcacggtatttcagatgaccgcagttataaagctgg
gtgcacacaattaccaaccatagtgatatgcgtttatacatttccctttttgacctatttctttatgaat
acggttcgtctgctcataactgttatacccgtgcgactgtcattagtatacctgagtgtttatgcttgca
aaaatatgtatgttattattgcctattttattgtgtaaagtggcctatgaagtgttctgtcatgttttta
tatgtttctcaaataaatccccttttaaaaatgtaaataaatatcttttaaaaaatttttaaattatttt
ttccagaattatatttttgggattttgatctttcgggatttcaacattcgggattatggcgttcgggatt
gtgtctttcgggattatgatcggctccc
>MER4E   Long terminal repeat of retrovirus-like element - a consensus.
tgaggactaagctctgatttttttatcttgcccaaattcctatctaaggggtctggggagtcatgcccta
caaaccataaattctcatcagatgggttttatttaaccctgtatatcgtgacttactttccaatctgact
ctggcataacattagagacaaggaagaaaatcaaaatattttaccccaaaatatatttccttgccatacc
ttgaaattgccctgcaaagtctcttgtgggaaaaatccacattctatagagaatcccctttcccctttgt
ttttctttccttccttcccagatccaggagataatcaactaagagccaggcacccttttaggtccgataa
gaaacattttacaacctgctctctctgaagtctgctatctgagagcttcctctgcacaataaaacttggt
ctccacaatcctttatcttaacctgaacatttcctttctattgatcccaggtcttcagataaactcaacc
aattgtcaaccagaaaatgtttaaatttacctatagcctggaagcccccgctttgagttgtcccgccttt
ctgaaccaaaccaatgtatttcttaaatgtatttgattgatgtctcatgcctccctaaaatatataaaac
caagctgtaccccgaccaccttgggcacatgttctcaggacctcctgagggctgtgtcacgggccatggt
cactcatatttggctcagaataaatctcttcaaatattttacagagtttgactcttttcgtcaaca
>MER104A   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcgttattcctagcggcatgactgggcatgcaacctttcgcgtttcagttaacaaacc
atttaaggaccatttgaggaaggaatatgagtcctggttgttgtctgaaaaccttctgttganaccttct
ggtaagatcaagaaagcgccagcatcaaaacttgcagaatgggtgtcagcggcttggaagaaaatccaga
caatagtggagcactcttttaagaaatgctgcatcaccaacgctcttgangcacagaggacgatattgtg
tggaaaaacacggacatcgatgactctgagtcgaaaagtgattcagaagagttggactctgaatgtgaag
aagttttaggaataccttaaccaatttatttcgcttatattttcctttttatgtatgcacaagagtgata
tatgataaaaatctgtgtctaaataagtctaaaagagctctttcaataagtataaaataaaaattctaat
gataaggaaagcattgtgtcatagtttaattggcagcgttttttctttcttagtggtacataaaataatg
gtgcgtcttacaatcgatggcatcttagattcgatgaaatacgg
>LTR40C   Primate LTR40B repetitive element - a consensus.
tgttgggagacaatcctccatgggtcccttgcactcctacatgtcttgctgggtataccaagaatgcaag
accctgactgctctttacctcgggccatttctcagggttgtgtttgcagcaagcaaccttgagggatgag
gtaatgtctccctctgggacaaagagcaggcttgcttactgcttcctataaaagcagcagattctccaag
ctcagtgttcctcngctgtgacacaaacccactgtgtgagcagcatccatctgggccctttgtgtcaccc
ctrtgggacttgaggggccatggggaactggtgcaaacatgctgatgctcatgctgcttgctgtgycatg
agtaataaagtcctttgtctctgacccaggagtcttatgtcttctactagcattcatgaaacaataacag
gctaacttattaacttttaagtagggtaaaatcncagacctgaca
>LTR54B   Long terminal repeat - a consensus.
tgttaaataaaatttatgggaggccattgttttggactgagctcctgcactaggccccaacagaccagac
caaaccaaaatggagtcactcatgctaagggtgccacgtaatcaaactgaactttgaaacaggccagttt
tccaaaatcaacagacttttgatagctaaaaacaaaaaacaggagattcacagcaaccaatcaaaagggg
cccagtcaacctgagccaacatgataaggaagtcccctctgctttaaccctatacaaggaaagtaacctg
aagtaaccctgatgttaaccaatccactttttgtactatgtttctgtttccttgttcctgctcaagctac
tttacaaaagccaaactgctctgccatgcccagcggagcactctttcttattttatagaatgggatgctg
cccaattcatgaatcacaaataaaagccaattagaatctttaaactaaatttgttgataaattttgtctt
ttgacaca
>MIR3   MIR3 SINE element associated with L3.
ttctggaagcagtatggtatagtggaaagaacaactggactaggagtcaggagacctgggttctagtcct
agctctgccactaactagctgtgtgaccttgggcaagtcacttcacctctctgggcctcagttttcctca
tctgtaaaatgagngggttggactagatgatctctaaggtcccttccagctctaacattctatgattcta
tgattctaaaaaaa
>MLT1G3   MLT1G3 subfamily - a consensus.
tgmcactcctccatcaagkggtagagtctatttccyctccccttgaatntgggytggnctttntgattgc
ctngaccaatagaatgcagtagaagtgatactgtctgacttcnaaggctawggtcataaaaaggccatgc
acttctaccttgctctcttgggangcttgctcttggaacccagccaccatgctgtgaggaagcccaagcc
acatggagaggccacatgtaggtgttctggccgacagtcccagctgaggtcccagccaacagccagcatc
aaccaccagacatgtgantgagtgaagaagcctccagatgattccagcccccagctgtcaagtcatcccc
agcctctnncagycmtccccagccttcaagtcttcccagctgaggccccagacatcatggagcagagaca
agccatccccactgtccmytgtgccctgtctgaattcctgacccacagaatccatgagcataataaaatg
gttgtttaagccactaagttttggggtggtttgttacaca
>MSTA2   Long terminal repeat - MSTA2 subfamily - a consensus.
tgctatggtttggatatggtttgtttgtccccaccaaaactcatgttgaaatttgatccccaatgtggca
gtgttgggaggtggggcctagtgggaggtgtttgggtcatgggggcagatccctcatgaatggcttggtg
ctgttctcatggtagtgagtgagtgagttctcactctcanragactggattagttctcgtaggaatggat
tagttcccatgagagtgggttgttataaagccaggatgcccctcaggttttgcctctttgcacgtgtcca
cttcccctttgaccttctctgccatgttatgatgcagcatgaaagccctcaccagaagccagggccatgc
ccttgaacttcccagcctgcagaaccatgagctaaataaacctcttttctttataaattacccagtctca
ggtattctgttatagcaacacaaaatggactaagaca
>L1MD1_5   L1MD1 LINE1 repetitive element 5' end - a consensus.
ttacattaaaantaataaaataaaataggttccagttccaggtaagatggagtaagcacactccaccctg
tctctcccactgaatgcagctataaaacctggacagaatgcatggagcagctatttgaggactctgaaaa
gtaaatagtagcaggcagattggggaagaagaccagaattcaaagtaccaccaaactagcagtgagttta
ccattttttctccgnntrgcagtgttttttncctctagtatcccacctatccccccaggctgrancctag
cctggactcaatgcagcctaaaacccagaagtgggcactggtgcagacagagagagctccaggagaagcc
ctctagttctggctcaaggagcaggaaaggggactcctaatgctcttcagagagagtgggggaaaagaaa
tcccctattttttttttttttttnttttctccattctcttataccccagcccccaggcaatcctgtggca
gtggcagcagcagcagcagcagcrgcagcagggnnggggcctgcaggagcctaaaactctgagagagggg
aaccttcctctctgatcagaggagctgtggtcccaagagggtggggcaaacccccattgcttttttttct
ctgtcctcctaccgcttggccctagatgtaggcacagtcataggaagtgtatagcagagcagggtaaata
aagccccagctttctggccagaggaccaaaaagaggagccccagggaaccagaaagtactagggagatca
cagagagggaggagctcaggaaagcaaccccataaagttgtttatgaactcctgggctcacccccaagct
gtacatgtatggatctgatcctaaacagcataccaaagactttgagaactgaactaaaggatagaccact
acccaggtcccagactggccactgggtggcacacacatgggacagatctgaatagcactgcaaaggcttt
gaaaactgaactgacattgaaaccacaacc
>LTR10E   LTR from a human endogenous retrovirus (LTR10E subfamily).
tgtagaaagtaaaaggtttcctcttcaaagtttcccttcttgttaaagaataaatcataagtgttagaaa
taatagtttcttttaaagactaacttccttcaagcctccttgctttgtgctaataactctttgttaagcc
ctatcctatgtagctgttagacataagggaataagtacattctatgtccttgtactttaaccaagatatt
tgtgctggacgtgctcacaggcatgtcccagctcgcagcctatgccccttccttatttggraatattatt
acttttctaagtcctttcgtaagcaacttcctcttttcctttgttctccattgcctttacctatttagaa
aagttttaaattattagccartcgggttttagtttagattgtgaggtctggctccagccaatggagacag
gacacagtagcagggacaaactgcgtaagggataaaaattgcttccctcctttgttcaggtgtgctcttg
ccattgttccatctgcgaggagcaccctttctgcagaaagtaaaattgccttgctgagaaaattaaattt
ttgtctgartgctaatttttctttgcagcaccgaggaacaagcattctgtttctaaataaacattttacw
tataaca
>LTR24C   Long terminal repeat from a human endogenous retrovirus - a consensus.
tgtgaaaataagtaattcaaaatctaagctgttggaactttaaattattttgagccttaaaggaatgtga
ttatgggrcctgagtcatatgacaggcagctgtaacctaggcagctgtaacctttgtttctctgattata
gattaagccttcttccttacctacattgttttgtaaaatgttgtaaatgactaaagggcrccagggaaga
ccccttccctcttcactgttgatcttcattatagattaacttccctcttacctntctcacacaaagactt
catgactatcacattgtcttaagatggaatgttaaatayactcttttaaattggaaaggaaatgaaaaca
agctgtaaggaaaagaaaacaagctgtatggaaaagaaaanaaaacaaactgtaactaactaattaaatt
gttgtaactcataaaccagccttgtatagaaaatgttataatcctattaaatttctttgttttctgccta
tataagcaagaccttaacttttaactttggagcactgaccccatttctctggagtctgtgtttcctgaat
ggccattcccagcttttnacttgaataaactctttaaaactggattctgatcctttcaattatttcaggt
tgaca
>MLT1C1   (MLT1c subfamily) - a consensus.
tgtagtgggttgaatggtggcccccamaaagatatgtccatgtcctaatccctggaacctgtgaatgtta
ccttatttggaaaaagggtctttgcagatgtaattaagttaagagatcttgagatggggagatcatcctg
gattatccaggtgggccctaaatccaatcacaagtgtccttataagagagaggcagaaggagatttgaga
cagagacnnagaagagaaggccatgtgaagacagaggcagagattggagtgatgcagccataagccaagg
aatgccagcagccaagccaccagaagctggaagaggcaaggaagaaaacggattctcccctagagcctcc
agagggagcatggccctgctgacaccttkgatttcagcccagtgaaactgatttcagacttctggcctcc
agaactgtgagagaataaatttctgttgttttaagccaccaagtttgtggtaatttgttacagcagccat
aggaaactaataca
>MSTD   Primate MSTD repetitive element - a consensus
tgctatggtttgaatgtgtcccccaaagttcatgtgttggaaacttaatccccaatgcaacagtgttggg
aggtggggcctaataagaggtgattaggtcatgagggctctgccctcatgaatggattaatgtcattatc
gcgggagtgggttagttatcgcgggagtgggtttgttataaaagnaagttcggcccccttttgctctctc
nctctcactctcttgcccttccgccttccgccatgggatgacgcagcaagaaggccctcaccagatgccg
gcnccwtgatcttggacttcccagcctccagaaccgtgagccaaataaatttctgttctttataaattac
ccagtctgtggtattctgttatagcagcacaaaacggactaagaca
>LTR68   internal sequence belongs to the MER4I-group - a consensus.
tgatatgtaaataaaatttttccaggagccagatagccmcatgtgtctcagattttatgacctaragatg
tctccaaggtctgaggcttcattattctttgaaatgtaaataccyagagagatagctactccagtcttcc
tggcaccttgggaacttaacctagggacctagtccgggctgtaaccatttggccctctaggggagataag
aaagttttattatccttttggatcagagcaattaactagacaaatggctacagatctaattctcatggta
tgtgaagagtaaaatgcttctaggggaagtgaaagcaaacattccctatctttacgtcatatacatttcc
atgtctcaggaggctagggctttttacagaagcactgagaaatccagggaaattttatttccccaca
>L1MED_5   L1MED_5 LINE1 repetitive element - a consensus.
cggacttccgtttccggcaatatggtagactagataacctgaaaaccctcccactacaaaacacctagaa
atgctggataaaatataacaaacatccttttaaatgcatagctgagctcgcaagaaagtaagggaaatcc
ccaggggccaaaaacgaagagagaactgaaaaccagagcggtaagtacgtgagctgangctgtgggctgc
cctgagggcaatttgccggtctcggtaaccaaggggcttgggttttaacgnccatgcggggataggagac
aaggccttgggcctacgcaaggcggagagttggaactgagatccctgcataaagccgggacccttgaagg
gctacaccctcagtgaaagggtagactagaaaaataatctgcccaccggcacagggagatgaaaagaaac
tgtctctnngcctgggctctgggtggagaanaaaagtctcccctgagaatttataaccacaggcctgccc
tcacgtgggtttggggttcaaatttacactacctgcgtggtccaggaanccccaagccgagaaattaaca
taaagtggtcccaggttggtagtgnccctggggcacctggcagaagcaaacgcaaatcctctctggaggg
acgcaccctcaacccaggcctcacaggattcccacagataaagctcngctaaacatgagctcacaatcca
aaattacaaaacacacgaggaaacagtctaccatgagcgagagtcagcagacacaacaaatagcaggatt
agactcccaaggaacttcagatattggaattatcagatacagaatataaaataagtatgtttaaaatgtt
agtgaaataataggaatatgaaataaaaacatgagaaagnaataaggtactatcaaaanaaccaaatana
acttttggaaatgaaaaatatatagtcattaaaattaaaaacccagtggataggtnaaacagcagattag
anacagctgaagagagaattagtgaactggaagatagatctgaagaaattacccagaanatgcacagaga
gataaagagatggaaaatatgaaagagaggttaagagacatggaggatagaatgaaaagatccaatanac
gtctaatagganttccagaaggagagaatatgatggggaaaggcaatattnaaagagataatggctgaga
attttccagaattgatgaaganatgaaccntcagattcagaaagcacaatgaatcccaagcagaataaat
acaaaaaaatttacatctagacacataataatcaaactgtcaaaagtcaaagataaaaaaaagatcttaa
aagcagccagagagaaaagatagattacctaaaaaggagcaacaataagactaacagcagacttctcanc
agaaaccatacaagccagaagacagtggaatgaaatctttaaagtgctgaaagaaaataaaaaantatcc
tnctatcaatctagaattgtatatccagtgaaactaaccttcaaaaatgaaggagaaataaaaacttttt
cagacaagcaaaaanaanagctgagggaatttattaccaccagacctgcaagaaatnctaaaggaagtac
ttcag
>L1ME5   3'-end of L1 repeat (subfamily L1ME5) - a consensus.
ctaaggaaagaattaaaaaaagtacaaaaatatatattcaagaattttcatttcaatattggntttaaaa
caataaaatatttggaaacaatctaaatgtctaataatgggagaataaataaattatagtatatctataa
aataaaatattatatagctattaaaawtatatttttaaaaaatatttaatgatataaaaaaatntttata
atataatattaaataaaaaaaataaattataaaattatatatataatataattttatatnttaaatatat
aatatatatataaatatatatatatatatatnaaataaaaaaaaaagactgaaaggaaatatacaccaaa
atgttaacagtggttatctctgggtggtgggattataggtgatttttatttttttttttttttttatatt
ttctgtattttctaaattttttntaaattttctacaataaatatgtattacttttataatcagaaaaaaa
ataaaaataataaaaat
>TIGGER6A   TIGGER6A repetitive element - a consensus.
caggcagtcctcgctttgcacggttccgatatgcatgaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccacggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactacataaataacagatgcgcatcatgatcagtga
ccaatcacatcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattcgaatcaaacgtaaatggagttatagaagaaatagctgaccgtgggaatgttgacac
tgccgccatttgagagactctagatatgcagccagaggaacttagtgaaggcgaacttatcgacataaat
gaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaagtgacgccagcaaaaaacttcacat
taaaggaactcttggagatatttcacgacattgaaagcgcaaaggataaaatgttggaagctgatccaaa
cttagaaaggagtatgacaatttgccaaggcatagaaaagatgcttactccgtatcgtaagttatataaa
gaagaagaaggcaagcactgttcaaactactcttgataagttttttttggtttgttttgataagtttttt
tacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattatagtgtactaaataaatat
tagttttattatttttttcattccctatacatttataaccgacggtaagagagtttttaatgtttttgac
aaaaatttttaaaggtcacggaacaattataattttcccattgattattaagatcgctttgcatggtttc
agcttgcatggtcatttttacggtcccgtactaccgtgcaaagcgaggactgcctg
>MER51C   Putative LTR of retrovirus-like element - a consensus.
tggaggcagggaacttaaggccaatttgtgctgacttcctaaaagagaaaacaccarggctgggggcagg
gaatctaaggccaattygtgctgacttcccaaagctggatcaaaaggaaaacacctgggtctgggggcag
ggaacctaaggccaattaacgcaaacttcctaaagctaaaccaaaaggaaaaaaccccatctccccatgc
cmgagtaacaaaggatcaaaggctactctccctacaaccctcccccttccaccacatctcagatggaaag
ggagagtgccttggattggccgcgggccaagcagggaccatcccttcatctgcatagggcgccaattcac
ctcagcctttaattagccacagaccaaatccttcatccagataaggggtagccaataggaacctcaaaag
gagtacttaaaacccagaaaactttgtaactgggcccttgagctrcttgcttgggcccactcccaccctg
tggagtgctttctcgctttaataaattcctgctttcgctgcttcgttcctgtgtttcattcctttgttac
tttgtgcgttttgttcaattctttgttcaaaaygccaaggacctggacaactcayastcaagrccctcct
tcyggtaaca
>LTR6B   LTR from retroviral-like sequence S71.
tgtaatgcccaaccttgtttttactaaccctgtttttagactctccctttcctttaatcacctagccttg
tttccacctgaattgactctcccttagctaagagagccagacagactccatcttggctctttcactggca
gccccttcctcaaggacttaacttgtgcaagctgactcccagcacatccaagaatgcaattaactgataa
gatactgtggcgagctatatccgcagttcccaggaattcgtccgattgataacgcccaaagccccgcgtc
tatcaccttgtaatagtcttaaagcccctgcacctggaactgtttactttcctgtaaccatttatccttt
taacttttttgcctactttacttctgtaaaattgttttaactagaccccccctcccctttctaaaccaaa
gtataaaagaaaatctagccccttcttcggggccgagagaactttgagcgttagccgtctcttggccgcc
ggctaaataaacggactcttaattcgtctcaaagtgtggcgttttctctaactcgctcgggtacaaca
>MER21A   Long terminal repeat of retrovirus-like element - a consensus.
tgtggtgttatgatatatatatgggttttcatccacagttcctggctcataactcccatagcccttgtta
cagtcttttgttataatgttggggtgcgttaggcctcaggggcagcctcagaaacagaatctctgacctt
ctcctgccctcctttcacctgccccaaggcaggactctaatcttctcccacctttctgattgtgggtcnt
aagaccctcattccagagggggtcccgccccataccctggaggaaggaatgctgcacagagagnccagga
agaatctgaacggacaggccttgctgggnttagatcanaccctttttgnccaatcacatttcnacagtcg
tccatgcttcagtcatggacagccaatgaagcctccataaaaanccaagaggacngggttcggggagctt
ccggatagctgaacacgtggaggctnccggaaggtgaacccggagggtggcgccccagnggcatggaagc
tcctgcgccccttcccccatacctcgccctatgcatctcttcatctgtatcctttgnaatatcctttata
ataaaccggtaaatgtaagtgtttccctgagttctgtgagccgctccagcaaattaatngaacccaaaga
gggggtcgtgggaaccccaacttgaagccagtcggtcagaagttccggaggcccggacttgcgactggtg
tctgggggtgggggcagtcttggggactgagccctcaacctgtgggatctgacgctatctccaggtagat
agtgtcggaactgaattggaggacacccagctggtgtccgctgcttggtgtgtggggaaaaacccccaca
catttggtcacagaagtcttctgtgttgatgattgttgtngtggtgtgagagcagaggaaaaacacggtt
tgagagagttttcccgaaaca
>MER34B   Long terminal repeat of retrovirus-like element - a consensus.
tgtgggagaccagaatatgccaccccaaaatatgcctctttggcataaggaytgttgagctgaaggcaat
taagaagaagcagatgcaggaaagctctctgccctccctctatttgcctaaaagcaggacatagatttac
aaagacaaaaggtatcctgcccccaccccttctaccagggagaacaaaggttaaccactgaagacaactt
tagacccttattggcctggagatggtaccagaggaatctacattaacaagccttactaactagcctttat
ctgccagttatttgccttcccacaagttgctgcccctagagactcaaagtccttttcctttgtcttgtca
cttctctaaaaatttnttttactgttctttgttgaagatgctatataagctggaattcaaagccacctct
ttgagaactactcattctctgggtgtctcccatgtatatatgaaatatacatgttnaaaaataaanttaa
taaacttctgtctgtttttctcttgttaatctgtcttttgttacaggggtctattccaactaagaactta
tgagggttgaggagaaaaaattatttttcttcccctaca
>LTR3B   LTR from human DNA related to mouse mammary tumor virus (MMTV) 3' LTR.
tgttgcaggccgaaagagtgagggtcgtgatcaactcagtataccactggaggctatatgagtaaacagc
aaactgttctcatgaatgcaggatgttggcaaactgacaaactgcgtctgccgcccagaaggaatgctga
gggcagtcacgncccaggcgcaagtgtttcttgtgattaggcacatctgaagcctgttagcaataatgtg
aacctgtgatcaatcaagcagctgaccaatcgttacctcctcctccctgctctttctacccaataaatac
gaagggctgtagaagctcagggcggctgcctttgctcactagaagcagggagccctcttcttcttccctg
gaccccttctttaaaacagtttcttttgtcttaagttttcatttctgcgttcgtcccccttcgttcagtc
ccgtagtgacggtctcaagtagtaacagtagtaactgtcgtagtgacggtctcaagtagtaaccgtggca
gtctgccaca
>MER54A   Primate MER54 repetitive element - a consensus.
tgttgtattttcctctaatttggtcttgaggtctctctctggagagtggctataaactctagccctgccc
tgatggggctccaggggakgtggtcgtggatgtttacagtgtgcctttcacgggatacttctttatcctg
gcggacggcctaatgcctaagtgtccgacccgtgaccaggtgtccctctcacaggaaacttgtttatact
ggcagacgcccttgtggctcttgtctgacctgtgtccagtttattcctaccaagatagccactctctagg
agagccctgaccgggaggagagttaggttcgggtgtgtcggtcaggtgagacacagaggaggcaacacaa
caaaacacatgaaataacagaagcagtktattacttacagatcccagagagaagagggcagcacgcctcg
cagggccaacgggaaggggggagccgtccgggacacgcgtgctcaaccagcgggtggggagcgagagaga
gagagagagggacctgcgggccgaagcctttattggggtccagggcattacccaagcaggtttcccgcgg
ggagttctaattggtgggtttagagcaagcaggcacgagttccgtggggtcacgctgtgactgagaggtg
gtcactgcggcatatctgcgcagtccatgtggggtgtgggggtcagtggggcgagtcaagtaggttgtat
ctagctgtcccatagggaggtggtcaccaggaggcggttgtataaggcagatatctggatcgaccacatt
gaggaactgggaggaggcggagaactggaaactgtgtcaagggtgactaagccctgcttctggtatgaga
aagtcnaacctatattcaaaatggatgccgaggcaacataaaattataagaattcactaca
>MER74C   Primate MER74C repetitive element - a consensus
tgttttttaaaatgctgtcttgacccagttttgaggccctggctagaggccggtcagttccccttcttga
gcagctgattaagtccacaccccaaccacttcccttatcgggctctcacactccgggaccactatgcacc
cgccctaattgccccagggccaggtaccagacaactagggacagcccctatgccccggagcccgcgaaat
tattcaaattagccaatccacagggagcccgngaaacctagctaaccccaccccacttgccatacataag
ctgccccctacagctccagcttgctgttaccctgtccctgggtgcaactccctgtgtggccctgcctggc
agccttctctcgtttggagctgtaagtaacaaagagttctgcctttcatctatccgagtgtcantgtgtt
gtgtcccgccatcaaaagaatctttaaatcttataaaaca
>ERVL   Internal part of endogenous retroviral element HERV-L; a consensus
[encoded data, 5822 characters]
ttgacaaggggtggacttgtgatg
>HERVL74   Endogenous retrovirus HERVL74 - a consensus
[encoded data, 5751 characters]
aaatatattggtttt
>MER83AI   Primate MER83AI repetitive element - a consensus.
[encoded data, 4331 characters]
gggatgtggaatcct
>MER83BI   Primate MER83BI repetitive element - a consensus.
[encoded data, 4899 characters]
atgccaaagatttgtcattgttgttctgtcaggggggaatgtggaatcct
>MER84I   Internal sequence of endogenous retrovirus MER84I.
[encoded data, 4970 characters]
atgggggaatataaagggtcaaagatttgaccaagatatttgtcagggggaaaa
>LTR75   Primate LTR75 repetitive element - a consensus
tgtaggggaacggctccgccatggcgccctggcgaccttgcacgtatccacataggccacgcaggcaaag
gcttgaaccgcagctaatctgagtcttggcagaacgccttgtgatcctcccggaacacgagaggatggga
ggcttgtgaggagctgctncaaggccatctcccactcgcctccctatctcccctgggaggctgtcatgag
acagtttctcatcgcctcccgggttctgatgaggtatggggctttctgcctcgcccccctcaggatagag
ctgcagantataaaaccgcttagctgcagtctagaattggctcctcagcaacggggtatcccacaactcg
cgttgcagtcatccggccccttttgtttcggtgtcgtcctttttggtgtgtgggacaaggaccgcgggga
gctggcacctttggctactcttcctttcnctgtctatgtaagtaataaactgtctgaatctaaaagtggc
tcgttgtatctttaccagccgaatcagtcgggccttggccttggccttgccttgcctcgtgtgtgcttga
ca
>L1PA7_5   L1PA7_5 - a consensus.
ggtggctggcaagatggccgaataggaacagctctggtctgcagctcccagcgagatcaacgcagaaggc
aggtgatttctbcatttccaactgaggtacccggctcatctcattgggactggttagacagtgggtgcag
cccacggagggcgagcagaagcagggtggggcgtcgcctcacccgggaagcgcaaggggtcagggaactc
cctcccctagccaagggaagccgtgagggactgtgccacgaggaacgrtgcattccggcccagatactat
gcttttcccatggtcttcgcaacccacagaccaggagattccctcgggtgcctacaccaccagggccctg
ggtttcaagcacaaaactgggcagccgtttgggcagacaccgagctagctgcaggagtttttttttttcg
taccccagtggcgcctggaacgccagtgagacagaactgttcactcccctggaaagggggctgaagccag
ggagccaagtggtctagctcagtggatcccacccccacggagcccagcaagctaagatccactggcttga
aattctcgctgccagcacagcagtctgaagtcgacctgggatgctcgagcttggtggggggaggggcatc
cgccattactgaggcttgagtaggcggttttcccctcacagtgtaaacaaagccaccaggaagttcgaac
tgggcggagcccaccacagctccgcaaancggctgtagccagactgcctctctagattcctcctctctgg
gcagggcatctctgaaagaaaggcagcagccccagtcaggggcttatagataaaactcccatctccctgg
gacagagcacctgggggaaggggcggctgtgggcgcagcttcagcagacttaaacgttcctgcctgccag
ctctgaagagagcagcggatctcccagcacagtgctcgagctctgctaagggacagactgcctcctcaag
tgggtccctgacccctgtgcctcctgactgggagacacctcccagcaggrgtcgacagacacctcataca
ggagagctccggctggcatctggtgggtgcccctctgggacgaagcttccagaggaaggaacaggcagca
atctttgctgttctgcagcctccgctggtgatayccaggcaaacagggtctggagtggacctccagcaaa
ctccagcagacctgcagcagaggggcctgactgttagaaggaaaactaacaaacggaaagcaatagcatc
aacatcaacaaaaaggacgtccacacagaaaccccatccgaaggtcaccaacatcaaagaccaaaggtag
ataaatccacgaagatgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaaccagaacgcctcttc
tcctccaaagaatcacaactcctcgccagcaagggaacaaaactggacggagaatgagtttgacgaattg
acagaagtaggcttcagaaggtgggtaataacaaactcctccgagctaaaggagcatgttctaacccaat
gcaaggaagctaagaaccttgaaaaaaggttagaggaattgctaactagaataaccagtttagagaagaa
cataaatgacctgatggagctgaaaaacacagcatgagaacttcgtgaagcatacacaagtatcaatagc
cgaatcgatcaagcagaagaaaggatatcagagattgaagatcaact
>L1PA13_5   Primate L1PA13_5 repetitive element - a consensus.
caagatggccgactagacgcagccaggnggaacanctgccaccgagggaccgggacatcgggaagactgg
cgcactcctagcagatcttcagagggaaggcactgagagtggacggagggaagacacagangctgggctg
aagggggaggaagctgggaaccctgcacggggctaccgcgcaccgggactcgttcctggcccccaacgac
tccnggggaangggtgagttgaacnggcaaggagcaacccgctctcgccatgggcctctggaatcccggc
aggaggagacccctcgaccaccacggacacttgagttggcagggagagctgcttagagaagtggtagggg
cagnactccagccggtgcggagcccagagggtttggtgcgggagcgtctgtagtggagcacggccaggga
cgcccatccccctaggctcgacttgctcccataggagactttagccctaggggaactgtcggacctgaac
tctgcagggcggtcttgcccatgagacggggccagtccgacctgagcaccccttggtctgctggcctctc
ccggggccccagcctggccgcgcctgcttgcagtgcagcctcaggtgccctgggggcccgcatcatagct
cctgcgctggcggaccgcgcctgaccggcagagagctccagcagggtggcccccacggacacgcaccagc
ccgcccgcnccctccccncactgcagcctccccatgccgctttgcctgcacgcactcgcccacggcmacc
ccccacatcgctttgccggcacgtgtgtgcacgggcgggccttgccttccctkccccgccagcgcgcgtg
tgcgcgtgcaccctgccntgccactgctgccggcgtgagtgcaccccgcccccccntcccccgccgcact
gccattgcmgtcggagcmttggcgggcacagagcccgccagccccacccccgccagcgccccgycccctg
cgccgacactgccgcnggagtgaaactaggcacggagaacagcggaccctcccccgccctgagcggccac
cnccgcccgcgtgaacgcgcacagagggtgcacacagncctgcgcccaccagcgccccgccccgtgctaa
caccaccaccagcgcgancgcacgcacagtcgccggcgggggcccctcgccnccccgagccatgctgccn
ccgccgctgctgcgaacgcccgcacggaggccggcaccccggcacccgctagcaccctgctgcagccgat
gagtgtgcaccccgccgtgctgccgctgccactgctgctggcacgtgcgaacgaggacggatcccgctgc
caccgccctacaaagcgctttggctggcaccacccatcggagtgttgtgaccagcggtccgggagcacct
cggcccctccagcgcagcgggttcctaaccttgaggagccagagaacaaagccggggcccgatacnagtc
ccccagagttagagcacgcagtccaggagtcctgagctgagccttggccccctaaaatcttccagaaatg
aagccagtcgactgaacccaccttataccacaatcaaacccccaaggtcatcaaataggataaaagaaaa
aaaaaccatccaaaggncagcaacttcaaagattgaaggaacatcagcccacaaagatgagaaagaacca
gcgcaagaactctgacaactcaaaaagccagagtgccttctttcctccaaacgaccgcactanctctcca
gcaagggttctnaaccgggctgagatggctgaaatgacagaaatagaattcagaatatggataggaacga
agatcatcgagatncaggagnacgttgaaacccaatccaaggaagctaagaatcacaataaaacgataca
ggagctgacagacaaaatagccagtatagaaaagaacgtaactgacctgatagagctgaaaaacacacta
caagaatttcataatgcaatcacaagtattaatagcagaatagaccaagctgaggaaagaatctcagagc
ttgaagactggctttctgaaataagacagtcagacaagaatagagaaaaaagaatgaaaaggaacgaaca
aaacctccgagaaatatgggattatgtaaagagaccaaatctatgactcattggcgtccctgaaagagat
ggggagaatggaagcaacttggaaaacatatttcaggatatcatccatgagaacttccccaacctagcta
gagaggccaacattcaaattcaggaaatgcagagaacc
>L1M1_5   L1M1 LINE1 repetitive element 5' end - a consensus.
aagtggtgattagagggaggcggagcaagatggccgaatagaagcctccaccgatcgtccatcctccccg
caggaacaccaaattgaacaactatccacacaaaaaagcaccttcataagaaccaaaaatcaggtgagcg
atcacagtacctggttttaacttcatatcactgaaagaggcactgaagagggtaggaaagacagtcttga
atcgccgacgccacccctcccccatcccccggcagcggccgtgtggcgcggagagagaatctgtgcactt
gggggagggagagcgcagcgattgtgggactttgcattggaactcagtgctgccctgtcacagcggaaag
caacaccgggcagaactcagccggcgcccacggagggagcatttagaccagccctagccagaggggaatc
acccatcccagcggtcggaacctgagttccggcaagcctcgccaccgcgggctaaagtgctctggggtcc
taaataaacttgaaaggcagtctaggccacaaggactgcaattcctgggcaagtcctggtgctgtgctgg
gctcagagccagtggacttggggggcacgcgacctagtgagacaccagccggggcggccaagggagtgct
tgcgccacccctcccccaaccccaggcagcacagctcgcagctccgggagagactccttccttccgcttg
aggagaggagagggaagagtaaagaggactttgtcttgcaacttggataccagctcagccacagtaggat
agggcaccgggcagagtcctgaggcccccattccaggccctagctcccagacgacatttctagacacacc
ctgggccagaagggaacccgctgccttgaagggaaggacccagtcctggcaggattcatcacctgctgac
taaagagcccttgggccctgaataatcagcagcggtacccaggcagtactcgccgtgggccttgggtgag
actcagagacgtgctggcttcaggtgtgacccagcacattcccagctgtggtggctatggggagagactc
cttctgcttgagaaaaggagagggaagagtaaaggggactttgtcttgcagcttaggtaccagctcagcc
acagtggggtagagcaccaagcgggctcttggggtccccgattccaggccttggctcttggacggcattt
ctggacctgccctgggccagaggggagcccactgccctgaagggngagtcccaggcctggcagcattcac
cacaagctgactgaagagcccttgggccttgagtgaacatcggcggtagccnggcagtactcgccgtggg
cctggggtggtggtggccatggggagagactcctctgcctgtggaaaggggagggaagagtgggaaggac
tttgtcttgtggcttgggtgccagctcagccgcagtagaatagagcaccaggtagattcctaaggtttct
gactccaggccctggctcctggatggcatctctggacccgcctggggccngggggaactcgccaccctga
agggaaggacacaagcctggctggctttgccacctgctgattgtagagccctagggccttgagcaaacat
aggcggtagccaggcagtggttacngcgggccttgggcgagacccagtgctgtgctggcttcaggtctga
cccagcgcagtcccagtggtggtggccacaggggtgcttgtgtcacccctcccccagctccaggcagctc
agcacagagagagagactccgtttgtttgggagaaagtaagggaagagaacaagagtctctgcctggtaa
tccagagaattcttccggatcttatccaagaccaccaaggcggtacctctacgagtctgcaagagccaca
gcgttactgggcttggggtgccccctaatgcagatacggctgcagtgaccaaaaacttagatcacaacac
ccaagtcccttcgaatacctggaaagccttcccaagaaggacgggtacaaacaagcccagactgtgaaga
ctacaataaatacctaactcttcaatgcccagacaccgacgaacatccacaagcatcaagaccatccagg
aaaacatgacctcaccaaatgaactaaataaggcaccagggaccaatcccggagagacagagatatgtga
cctttcagacagagaattcaaaatagctgttttgaggaaactcaangaaattcaagataacacagagaag
gaattcagaatcctatcagataaatttaacaaagagattgaaataattaaaaagaatcaagcagaaattc
tggagttgaaaaatgcaattgacatactgaagaatgcatcagagtctcttaacagcagaattgatcaagc
agaagaaagaattagtgagcttgaagacaggctatttgaaaatacacagtcagaggagacaaaagaaaaa
agaataaaaaagaatgaagcacgcctacaagatctagaaaatagcctcaaaagggcaaatctaagagtta
ttggccttaaagaggaggtagagagagagataggggtagaaagtttattcaaagggataataacagagaa
cttcccaaacctagagaaagatatcaatattcaagtacaagaaggttatagaacaccaagcagatttaac
ccaaagaagactacctcaaggcatttaataatcaaactcccaaaggtcaaggataaagaaaggatcctaa
aagcagcaagagaaaagaaacaaataacatacaatggagctccaatacgtctggcagcagacttttcagt
ggaaaccttacaggccaggagagagtggcatgacatatttaaagtgctgaaggaaaaaaacttttaccct
agaatagtatatccagtgaaaatatccttcaaacatgaaggagaaataaagactttcccagacaaacaaa
agctgagggatttcatcaacaccagacctgtcctacaagaaatgctaaagggagttcttcaatctgaaag
aaaaggacattaatgagcaataagaaatcatctgaaggtacaaaactcactggtaatagtaagtacacag
aaaaacacagaatattataacactgtaattgtggtgtgtaaactactcatatcttaagtagaaagactaa
aagatgaaccaatcaaaaataataactacaacaacttttcaagacatagacagtacaataagatataaat
agaaacaacaaaaagttaaaaagcggggggacgaagttaaagtgtagagtttttattagttttctctttg
cttgtttgtttgtgcaatcagtgttaagttgtcatcagtttaaaataatgggttataagatattatttgc
aagcctcatggtaacctcaaatcaaaaaacatacaacagatacacaaaaaataaaaagcaagaaattaaa
acataccaccagagaaaatcaccttcactaaaaggaagacaggaaggaaggaaagaaggaagagaagacc
acaaaacaaccagaaaacaaataacaaaatggcaggagtaagtccttacttatcaataataacattgaat
gtaaatggactaaactctccaatcaaaagacatagagtggctgaatggataaaaaaacaagacccaacga
tctgttgcctacaagaaacacacttcacctataaagacacakatagactgaaaataaagggatgaaaaaa
gatatttcatgcnaatggaaaccaaaaaagagnaggagtagctatacttayatcaganaaaatatatttc
aagacgaaaactataagaagagacaaagaaggtcactatataatgataaaggag
>L1M2A_5   Primate L1M2A_5 repetitive family - a consensus.
gagagtgacgtcagcaagatggccgactagaagcccctagcgctcgtccccctcacaaagacagccaaaa
caacgaataaacaactacattttaacgaaaataactaaaggagagcgccggagtacatcaaaggagtaac
agaaaccctggtgagcacagaaactcaggatggccacatagagaacggaaggaaacaccnggcctccacc
accccatcccccagccgggatcagctgggaaccaggaggaacttctccctacggngagaaggtaagcaag
aggatcccagcaacccccatcaacaccttggacacctacagtcctcaccactggggtcccctgcagtcct
cacaggcactaagcccagctgagggagctgcctggagtccacacagctgtgctccccccagagaaggagc
cgacactgtgccccgccccctgtggcccacacggctactgcgctacgccatcttggaactggaactactg
ctggagtgtgtcttgctctgggggcgagtagccatngcaccccttcatccctgaggctaagccgccactg
aaccaccccngcccggtggcccaacatccccaagccgagctgcaagcagctgttacacccttccccgtgg
ggccaagcagcggtggagccgctccacctacccctcccagtgctgctgcaccctgccccctcaggccaga
gctgaagcagtaccctgcctcctggggaaacagtgccttggccacccagagcagtcacgcctccctggtg
cctaagctgaagcagcgccctgcntcccaggaaacggtgccttggccacccagagcagtcacacccccca
ggcctgagctgaagcggcacactgccccccggggaatcggtgccctggccgagctgagcagctgcacatc
ccagggctgagctgatgtagtaccccgcgtcccagggaaacagagcagtggctgagctgagacaccccgc
cctacaggccaaacaactctagtaccctgcttccctggagctggactagccccctagagtctgagctgct
gagacacccccctccctggggagtggagtcatcgctgcgctgctccctgccccccgcagggcccaagcga
cagctgtgctccgccattctggggtccttgctgctgctgcacctggcctcacagagtctgggatactgcc
gagccccaccatcccagggtccagagtcaccactacgcggtgcctcatcccctgggacccgagttgccac
tgagccctattggctcaggttcccgaattgcagccgtaccctgctccccgggcccaaacctccagagcac
cccttcttccccggagtcaggccagtgctgtgccctgccccccagggntagaatcacagctacaacccag
ccccctgggcccgagctgctagggggtgcctcagagtcacagatcctggctctgtgggcaacctacatcc
aaccctgccacagagagtaaacctgcaccccaagacccaggtgccacaataggttcgcgagaccctgagc
ctaggaccccggccccacagccgctccgagcacctgcacctggaacccagcgccgctgcagctgcttgta
ggccatgtcagacccgacaccaagagggatcccctcggctaagtctccccattgtggggaaaatgagaat
aggaggaccccaaaagcccttgacaccaaggacattaacaacctacgctgccaccgccgctgccacaaac
ttctacagcctaggccactgaggcacccacagttattgctgacgttgaacgcagctgaagaagctgcacg
gagactataccactgcacctacctggaaacagagtcaccacacccttcccaaccggcacactaagaccca
actgcaggtgaaagtctttctctatgaaagccactctagaaagtttggaagaggcgattgttccaccaga
tgcacagacatcaatgcagggacacaagaaacatgaaaaagcaaggaaatatgacaccaccaaaggaaca
taataactctctagtaacagaccccaannaaaaggaaatcnatgaattgccagaaaaggaattcaaaata
atgatcttaaggaaactcagtgagatacaagagaatacagatagacaattcaatgaaatcaggaaaacaa
ttcacgatatgaatgagaaattcaacaaagagatagatatcataaaaaagaaccaaacagaaa
>L1M1B_5   LINE1 repetitive element 5' end - a consensus.
gagacttccggttccaaaatggcggcgtagaagcaagctggcttcactccccccccccacagaaaaccaa
aaacaaatatacagcaccgagattatcaccagcaatatcccagaactcaaatatgaggatgagacagttc
ccggggccacagagaagtgaaaaaactctgagcagacggtaagagaatcggacttccatatccgcgatgc
ccctccccccaatctgcccggcaccaagcgcgcagaaaattttcccccgactcacggtttctacactgga
aaaagtgagatcgaggtggacaaccagcttccccaccatcttgggttccctggcaggagacctgtccctg
cctcaacccacgggaagcatcangagtgcctgaagggagaaatatccctgaggacagccagagacaaagg
ggggaggtgggactaccatccccagccctggaaactctgctctgtaactcggccaaaggagacaccaaat
cagagtggctgttcagcagcaccacgctgtaggaggttcgttccacaggtcccctgggcacgaaccccta
gccagccttcccacactgccgggatatcccctttgggacctcccccattcgggacgggcagcgctctgat
tgtttactagagccgaggcaaacctgggcttaaggcgccatctagtgccgaaaaggaggcagcgacctag
cgggaaaaaaaaaaagaaaatcaacaggtaaattacaaagaatctctaagcaaacatacccaataaaaac
caaaacaagccagacagagaagactggaataaataactaatccttcaatgcaaagacatagacgtacatc
cacaagaaacaacagcaaacagggaaccatgacctcctcaaacggacaaagcaaggaaccagtgactgac
cctaataagacggcgatatgtgagctctctgaccaagaattcaaaatagcagttttaaggaaactcagtg
atctccaagataacacagaaaagcaattcagaaatttatcagagaaatttaacaaagagattgaaataat
tttaaaaaatcaaacagaaatcttggaactgagaaatacatttgctgaactgaaaaattcattagaggct
ctcaacagcagaatggatcaagcagaggaaagaatcagtgagctcgaagacaggctatttgaaaatacac
agtcagaggagaaaaaagaaaaaagaatgaaaaggaatgaagatcacctacaagatatagaaaattacct
caa
>L1MB3_5   L1MB3 LINE1 repetitive element 5' end - a consensus.
ataaaaaaantaatgaggagaggattctgggaagatggcagagtaggaagcaccaggaatctgtctcccc
acctagacaacaattgcactggcagaatctgtctgatgtaactattttggaactctggagtctattgaag
gcttgcaacttccaggggaaggcttggacggtaaattgcggttaatttcggtcaatttcagctcttagca
cagtagcagctacccatcccccacccccagccccatggcaggcagctgtgcacgtgttcctggagcagct
tgcacacagcttgcgggagccagggtgggcaaaaaggaccctgtcctccaaatatcagggatctgtgctc
tgatcgctgattgctgcttctgatcacagaggtgcagacaaagaggcgggcggccattgttgttgcacct
ccccccattgttgcaagcccctccccctccggctgaagtgacttccaggggatttaaagggccggcaccc
tttctcccctttatttttcttttttccccttttgggagccagacattaaagactaggacattcaaaagca
actgcatatacggggaaaattagaaagtgaccgtgcatgcccagggaaaggcacaggctcagaaaagacc
tgagaagaccttaagtttacacctcaggctgatccttggcacagagacagcctacaacaataaaaacaaa
acaaaaaaataacaaaaacacagcaaaccctggggaagggggagaatctgatttccagagttaccacatt
attagattcaaatgtccagttttcaacaacaacaaaaaatcacaaggcatacaaagaaacaggaaagtat
ggcccattcaaaggaaaaaaataaaccaacagaaactgtccctgaaaaagacctgatggcagatctacta
gacaaagactttaaaacaactgtcttaaagatgctcaaagaactaaaggaagacgtggagaaagtcaaga
aaacgatgtatgaacaaaatggaaatatcaataaagagacagaaaacctaaaaagaaaccaaaaagaaat
tctggagctgaaaagtacaataactgaaatgaaaaattcactagagggattcaaaggcagatttgagcag
gcagaagaaagaatcagcaaacttgaagataggacaacggaaattattgagtctgaggaacagaaagaaa
aaagattgaagaaaagtgaacagagcctaagggacctgtgggacaccatcaagcggaccaacatacgcat
tgtgggagtcccagaaggagaagagagagagaaaggggcagagagaatatttgaagaaataatggctgaa
aacttcccaaatttgatgaaagacatgaatataaacatccaagaagctcaacgaactccaagtaggatga
actcaaagagacccacaccgagacacattataatcaaactntcgaaagccaaagacaaagagagaatctt
gaaagcagcaagagagaagcgactcatcacatacaagggatcctcaataagattatcagcagatttctca
tcagaaactttggaggccagaaggcagtgggccgatatattcaaagtgctaaaagaaaaaaactgtcaac
caagaatcctatatccggcaaaactgtccttcaaaagtgagggagaaattaagacattcccagataaaca
aaagctgagggagtttgttaccactagacctgccctgcaagaaatgctnaagggagtcctgcagggtgaa
atgaaaggacactagacagtaacttgaagccgtatgaagaaataaagatctcagtaaaggtaaatacatg
ggcaattataaaagctagtattattgtaacaatggtttgtaactccactttttgttttctacatgattta
agagactaatacatttttaaaaattattagtctaaaagctagtattattgtaactttggtttgtaactcc
acattttgttttctacataatttaagagactaatgcatttaaaaaaattattagtttatgtttttgggca
cacaatgtataaagatgtaattttgtgacatcaacaactgaaaggggtggggatggagctgtaaaggagc
agagtttttgtatgttattgaagttaagctggtataaattcaaattagagtgttataactttaggatgtt
aaatgtaatccccatggtaaccacaaagaaaatagctatagaatatacacaaaaggaaatgagaaaggaa
tttaaacgtttcactacaaaaaaatcaactaaacacaaaagaagacagtaatgcaggaaatgagggacaa
aaaagctataaggcatatagaaaacaaatagcaaaatgacagaagtaagtccctccttatcagtaattac
tttaaatgtaaatggattaaactctccaatcaaaagacagagattggcagaatggatnaaaaaacatgat
ccaactatatgctgtctacaagagactcactttagatccaaagacacaaa
>L1MDB_5   Expanded 5' end of L1MD2 subfamily - a consensus.
ttaaaaagacttctggtctagacaagatggcgtggacccgtttctccctgctcctccccgctaagtacaa
ctataaaccctggaaataacgcaagaggcaaccaaaggagaactctgaaaggtggtaagaggaaggcgaa
ctggtttgggaccccaggactggaggaacagcacagcggcagggtgtcttacgtccccccacccaacaga
agaaggtgacccagacccggcgtttcccaacccccgacctagcaacagaaggcagcccaggnaggctcat
tcctctcctggatcgaatgggagtccctccgacaacaccaggtgagcccagcgccaccggcaagggggat
caatcgggagccccgctaacaataagcagccaggggaagcgctctccttccccaccgggcctgagactcc
cctcccctgccgagagacactgaggctgncaaggcagcaccggcaagagggatcctgccacaacaagcag
cctggtccgggaagcctctttgtccccatgggcctgagactcccctcccctacccagagacactggggnn
gcaggcggcaccggcaaaggggatcccgccacaacaagcgcccggcccgggaagcctcttcgtccccacg
gacccgagactcccctcccccgcccaccactcccttcccccaccnagaggcaccnggcggcccggcctgg
ggaaaccccttctgccccctcaggcagcaccagcagggaccagtgggagccccagcggcaccagataaac
caagcagaccaaaataacaccgcaaaggctctgaaaattaaactgtcattggaaccacagcccacaaaag
taggccaggacctgcatgctaaacctaaacagggtgactgcctgctaaaataaaagatttaaataggacc
cagagtctcctaacataatagacaaaatgtccaggatacaatnaaaaatcacccgtcataccaagaacca
ggaaaatcacaacttgaatgagaaaagacaatcaactganaccaacaccgagatgaatcagatgttggaa
ttatctgacaaggattttaaagcagccatcataaaaatgcttcaacaancaattacaaattctcttgaaa
caaatgaaaaantaaaaatctcagcaaagaaatagaagttatnaaaaagaaccaaatggaaattatagaa
ctgaaaaatacaataacagaaattnaaaactcactggatgggctcaatagtagagtggagatgacagaag
atagaatcagtgaacttgaggacagatcaatagaatttacccaatctgaacaacagagagaaaatagact
gaaaaaaaaatgaacagagcctcagggacctgtgggacaataacaaaagatccaacattcatattatcag
agtcccagaggagaggaaaaag
>L1HS   3'-end of L1 repeat (subfamily L1HS) - a consensus.
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaatg
ctcatcatcactggccatcagagaaatgcaaatcaaaaccactatgagatatcatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgcggagaaataggaacacttttac
actgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctaga
actagaaataccatttgacccagccatcccattactgggtatatacccaaatgagtataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcactattcacaatagcaaagacttggaaccaaccca
aatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaatgatgagttcatatcctttgtagggacatggatgaaattggaaaccatcattctcagtaaacta
tcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatg
gacacaggaaggggaatatcacactctggggactgtggtggggtcgggggaggggggagggatagcattg
ggagatatacctaatgctagatgacacattagtgggtgcagcgcaccagcatggcacatgtatacatatg
taactaacctgcacaatgtgcacatgtaccctaaaacttagagtataataaaaaaaaaaaaa
>L1PA3   3'-end of L1 repeat (subfamily L1PA3) - a consensus.
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatg
ctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttac
actgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctaga
actagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcactattcacaatagcaaagacttggaaccaaccca
aatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaatgatgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctcagtaaacta
tcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagaacacatg
gacacaggaaggggaacatcacactctggggactgttgtggggtggggggaggggggagggatagcattg
ggagatatacctaatgctagatgacgagttagtgggtgcagcgcaccagcatggcacatgtatacatatg
taactaacctgcacattgtgcacatgtaccctaaaacttaaagtataataataataaaaaaa
>L1PA4   3'-end of L1 repeat (subfamily L1PA4) - a consensus.
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaatg
ctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttaga
atggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttac
actgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctaga
actagaaataccatttgacccagccatcccattactgggtatatacccaaaggattataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcactattcacaatagcaaagacttggaaccaaccca
aatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaatgatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaacta
tcgcaaggacaaaaaaccaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacatg
gacacaggaaggggaacatcacacaccggggcctgttgtggggtggggggaggggggagggatagcatta
ggagatatacctaatgttaaatgacgagttaatgggtgcagcacaccaacatggcacatgtatacatatg
taacaaacctgcacgttgtgcacatgtaccctaaaacttaaagtataataataaaaaaaaaa
>L1PA5   3'-end of L1 repeat (subfamily L1PA5) - a consensus.
ctaatatccagaatctacaawgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaamaagt
gggcgaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatg
ctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttaga
atggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttac
actgttggtgggactgtaaactagttcaaccattgtggaagwcagtgtggcgattcctcagggatctaga
actagaaataccatttgacccagccatcccattactgggtatatacccaaaggattataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcactattcacaatagcaaagacttggaaccaaccca
aatgtccawcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaacta
tcgcaaggacaaaaaaccaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacttg
gacacaggaaggggaacatcacacaccggggcctgttgtggggtggggggaggggggagggatagcatta
ggagatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatggcacatgtatacatatgt
aacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataataawaaaaaaaaaa
>L1PA6   3'-end of L1 repeat (subfamily L1PA6) - a consensus.
ctaatatccagaatctacaaagaacttaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatg
ctcatcatcactggtcatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttaga
atggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaacgcttttac
actgttggtgggagtgtaaactagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
actagaaataccatttgacccagcmatcccattactgggtatatacccaaaggattataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcactattcacaatagcaaagacttggaaccaaccca
aatgtccatcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaaggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaacta
tcacaaggacagaaaaccaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacntg
gacacagggcggggaacatcacacaccggggcctgtcgtggggtggggggctgggggagggatagcatta
ggagaaatacctaatgtaaatgacgagttgatgggtgcagcaaaccaacatggcacatgtatacctatgt
aacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataataaaaaaaaaaaaa
>L1PA8   3'-end of L1 repeat (subfamily L1PA8) - a consensus.
ctaatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggatatgaacagacacttctcaaaagaagacatttatgcggccaacaaacatatgaaaaaaag
ctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccatctcacgccagttaga
atggcgatcattaaaaagtcaggaaacaacagatgctggcgaggatgtggagaaataggaacgcttttac
actgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctac
tataaagacacatgcacacgtatgtttattgcagcactatttacaatagcaaagacttggaaccaaccca
aatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaagaatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaacta
acacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgaacaatgagaacacatg
gacacagggaggggaacatcacacaccggggcctgtcggggggtggggggcaaggggagggagagcatta
ggacaaatacctaatgcatgcggggcttaaaacctagatgacgggttgataggtgcagcaaaccaccatg
gcacatgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagaacttaaagtaaaataaaa
aaaaaaaaa
>L1PA10   3'-end of L1 repeat (subfamily L1PA10) - a consensus.
ctaatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccattaaaatgt
gggcaaaggacatgaacagacacttctcaaaagaagacattcatgcggccaacaaacatacgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacgccagtcaga
atggcnattattaaaaagtcaagaaacaacagatgctggcgaggttgtggagaaataggaacgcttttac
actgttggtgggaatgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaagatctaga
accagaaataccatttgacccagcaatcccattactgggtatatacccaaaggaatataaatcattctat
tataaagatacatgcacgtgtatgttcattgcagcactattcacaatagcaaagacatggaatcaaccca
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaggaatgagatcatgtcctttgcagggacatggatggagctggaagccattatcctcagcaaacta
acgcaggaacagaaaaccaaacaccgcatgttctcacttataagtgggagctgaacaatgagaacacatg
gacacagggaggggaacaacacacactggggcctgtcggggggtgggggtggggggagggagagcattag
gaaaaatagctaatgcatgctgggcttaatacctaggtgatgggttgataggtgcagcaaaccaccatgg
cacacgtttacctatgtaacaaacctgcacatcctgcacatgtaccccggaacttaaaataaaaattaaa
aaaaa
>L1PA12   3'-end of L1 repeat (subfamily L1PA12) - a consensus.
ctaatatccagcatctataaggaacttaaacaaatttacaagaaaaaaacaaacaaccccattaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatacatgtggccaacaakcatatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagtcaga
atggctattattaaaaagtcaaaaaataacagatgctggcgaggttgtggagaaaaaggaatgcttwtac
actgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaagacctaaa
gacagaaataccattcgacccagcaatcccattactgggtatatacccaaaggaatataaatcattctat
tataaagacacatgcacgcgtatgttcattgcagcactattcacaatagcaaagacatggaatcaaccta
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaagaacgagatcatgtcctttgcagggacatggatggagctggaggccattatccttagcaaacta
acgcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaatgatgagaacacatg
gacacatagaggggaacaacacacactggggcctatcggagggtggagggtgggaggagggagaggatca
ggaaaaataactaatggatactaggcttaatacctgggtgatgaaataatctgtacaacaaacccccatg
acacacgtttacctatgtaacaaacctgcacatcctgcacatgtacccctgaacttaaaataaaagttaa
aaaaa
>L1PA13   3'-end of L1 repeat (subfamily L1PA13) - a consensus.
ctaatatccagcatctataaggaacttaaacaaatttacaagaaaaaaacaaacaaccccattaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatacatgcggccaacaatcatatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagtcaga
atggctattattaaaaagtcaaaaaataacagatgctggcgaggttgcggagaaaaaggaacgcttatac
actgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaagacctaaa
gacagaaataccattcgacccagcaatcccattactgggtatatacccaaaggaatataaatcattctat
tataaagacacatgcacgcatatgttcattgcagcactattcacaatagcaaagacatggaatcaaccta
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaagaatgagatcatgtcctttgcagggacatggatggagctggaggccattatccttagcaaacta
acgcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaatgatgagaacacatg
gacacatagaggggaacaacacacactggggcctattggagggtggagggtgggaggagggagaggatca
ggaaaaataactaatgggtactaggcttaatacctgggtgatgaaataatctgtacaacaaacccccatg
acacaagtttacctatgtaacaaacctgcacatgtacccctgaacttaaaataaaagttaaaaaaaaaaa

>L1PA14   3'-end of L1 repeat (subfamily L1PA14) - a consensus.
ctaatatccagcatctataaggaacttaaacaaatttacaagagaaaaacaaacaaccccattaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatacatgcggccaacaagcatatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagtcaga
atggctattattaaaaagtcaaaaaataacagatgctggcgaggttgcggagaaaagggaacacttatac
actgttggtgggagtgtaaattagttcaaccattgtggaaagcagtatggcgattcctcaaagagctaaa
agcagaactaccattcgacccagcaatcccattactgggtatatacccagaggaatataaatcattctac
cataaagacacatgcacgcgaatgttcattgcagcactattcacaatagcaaagacatggaatcaaccta
aatgcccatcaatgacagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaagaacgagatcatgtcttttgcgggaacatggatggagctggaggctattatccttagcaaacta
acgcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaatgatgagaacttatg
aacacaaagaaggaaacaacagacactggggtctacttgaggggggagggtgggaggagggagaggagca
gaaaagataactattgggtactgggcttaatacctgggtgatgaaataatatgtacaacaaacccccgtg
acacgtgtttacctatgtaacaaaccttcacatgtacccccaaacctaaaataaaagttaaaaaaaaa
>L1PA16   3'-end of L1 repeat (subfamily L1PA16) - a consensus.
ctaatatccagaatctataaggaacttaaacaaatcaacaagcaaaaaacaaacaaccccattaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatacaagcggccaacaaacatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagtcaga
atggctattattaaaaagtcaaaaaacaacagatgctggcgaggctgcggagaaaagggaacgcttatac
actgttggtgggaatgtaaattagttcagccactgtggaaagcagtttggagatttctcaaagaacttaa
aacagaactaccatttgacccagcaatcccattactgggtatatacccaaaggaaaataaatcattctac
caaaaagacacatgcactcgtatgttcattgcagcactattcacaatagcaaagacatggaatcaaccta
ggtgcccatcaatggtggactggataaagaaaatgtggtacatatacaccatggaatactacgcagccat
aaaaaagaatgaaatcatgtcctttgcagcaacatggatgcagctggaggccattatcctaagcgaatta
acgcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaacattgggtacacatg
gacataaagatgggaacaatagacactggggactactagaggggggagggagggaggagggcaagggttg
aaaaactacctattgggtactatgctcactacctgggtgatgggatcattcgtaccccaaacctcagcat
cacgcaatatacccatgtaacaaacctgcacatgtaccccctgaatctaaaataaaagttgaaaaaaaaa
aaa
>L1PB2   3'-end of L1 repeat (subfamily L1PB2) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggcaaaggacatgaatagacaattctcaaaagaagatatacaaacggccaacaaacatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaattaaaaccacaatgagatgccaccttactcctgcaaga
atggccataattaaaaaatcaaaaaacaatagatgttggcgtggatgtggtgaaaagggaacacttttac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattccttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccaaaggaaaagaagtcattatat
gaaaaagacacatgcacacgcatgtttatagcagcacaattcgcaattgcaaagatatggaaccaaccta
agtgcccatcaaccaacgagtggataaagaaaatgtggtatatatacaccatggaatactactcagccat
aaaaaggaatgaaataatgtcttttgcagcaacttggatggagctggaggccattattctaagtgaagta
actcaggaatggaaaaccaaatatcgtatgttctcacttataagtgggagctaagctatgaggacgcaaa
ggcataagaatgatataatggactttggggactcagggggaagggtgggaggggggtgagggataaaaga
ctacatattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaag
aacttatccatgtaaccaaaaaccacctgtacccccaaaaactattgaaataaaaaaa
>L1PB4   3'-end of L1 repeat (subfamily L1PB4) - a consensus.
ctaatatccagaatctataaggaactcaaacaactcaacaagaaaaaaacaaacaaccccattaaaaagt
gggcaaaggacatgaacagacatttttcaaaagaagacatacaagcggccaacaaacatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaattaaaaccacaatgagataccatcttacaccagtcaga
atggctattattaaaaagtcaaaaaacaacagatgttggcgaggatgcggagaaaagggaacgcttatac
actgttggtgggaatgtaaattagtacaacctctatggaaaacagtatggagatttctcaaagaactaaa
aatagaactaccattcgatccagcaatcccactactgggtatctacccaaaggaaaagaaatcattatat
caaaaagatacctgcactcgtatgtttatcgcagcactattcacaatagcaaagatatggaatcaaccta
agtgtccatcaatggatgactggataaagaaaatgtggtatatatacaccatggaatactactcagccat
aaaaaagaatgaaatcatgtcttttgcagcaacatggatggaactggaggccattatcctaagtgaaata
actcagaaacagaaagtcaaataccgcatgttctcacttataagtgggagctaaacaatgkgtacacatg
gacatacagagtggaataatagacactggagactcmgaaaggtgggagggtgggaggggggtgagggatg
agaaattacctawtgggtacaatgtacactattcgggtgatggktacactaaaagcccagacttcaccac
tacgcaatatatccatgtaacaaaactgcacttgtaccccctaaatctataaaaataaaaaaa
>L1MA1   3'-end of L1 repeat (subfamily L1MA1) - a consensus.
ttaataaccagaatatataaggagctcaaacaactctataggaaaaaatctaataatccgatcaaaaaat
gggcaaaagatttgaatagacatttctcaaaagaagacatacaaatggcaaacaggcatatgaaaaggtg
ctcaacatcattgatcatcagagaaatgcaaatcaaaactacaatgagatatcatctcaccccagttaaa
atggcttatatccaaaagacaggcaataacaaatgctggcgaggatgtggagaaaagggaacccttgtac
actgttggtgggaatgtaaattagtacaaccactatggagaacagtttggaggttcctcaaaaaactaaa
aattgagctaccatatgatccagcaatcccactgctgggtatatacccaaaagaaaggaaatcagtatat
caaagagatatctgcactcctatgtttgttgcagcactgtttacaatagctaagatttggaagcaaccta
agtgtccatcaacagatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgagatccagtcatttgcaacaacatggatggaactggagatcattatgttaagtgaaata
agccaggcacagaaagacaaacatcacatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggacatagagagtagaaggatggttaccagaggctgggaagggtagtgggggnttgggggggag
gtggggatggttaatgggtacaaaaaaaataagaaagaatgaataagacctactatttgatagcacaaca
gggtgactatagtcaataataacttaattgtacattttaaaataacttaaagagtgtaattggattgttt
gtaactcaaaggataaatgcttgaggggatggataccccattctccatgatgtgcttatttcacattgca
tgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaattaaaa
>L1MA3   3'-end of L1 repeat (subfamily L1MA3) - a consensus.
ttaataaccagaatatataaggagctcaaacaactctataggaaaaaatctaataatccgattaaaaaat
gggcaaaagatctgaatagacatttctcaaaagaagacatacaaatggcaaacaggcatatgaaaaggtg
ctcaacatcactgatcatcagagaaatgcaaatcaaaactacaatgagatatcatctcaccccagttaaa
atggcttttatccaaaagacaggcaataacaaatgctggcgaggatgtggagaaaagggaaccctcgtac
actgttggtgggaatgtaaattagtacaaccactatggagaacagtttggaggttcctcaaaaaactaaa
aatagagctaccatatgatccagcaatcccactgctaggtatatacccaaaagaaaggaaatcagtatat
cgaagagatatctgcactcccatgtttattgcagcactgttcacaatagccaagatttggaagcaaccta
agtgtccatcaacagatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgagatcctgtcatttgcaacaacatggatggaactggaggtcattatgttaagtgaaata
agccaggcacagaaagacaaacttcacatgttctcacttatttgtgggagctaaaaattaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtggggtgggggggaagtg
gggatggttaatgggtacaaaaatatagttagawagaatgaataagatctagtatttgatagcacaacag
ggtgactacagtcaacaataatttattgtacatttwaaaataactaaaagagtataattggattgtttgt
aacacaaagaaatgataaatgcttgaggtgatggataccccatttaccctgatgtgattattacgcattg
tatgcctgtatcaaaatatctcatgtaccccataaatatatacacctactatgtacccacaaaaattaaa
aattaaaa
>L1MA4   3'-end of L1 repeat (subfamily L1MA4) - a consensus.
ttaatawccagaatatacaaggaactcaaacaactcaacagcaaaaaaacaaataatccgattaaaaagt
gggcaaaagatctgaatagacatttctcaaaagaagacatacaaatggccaacaggtatatgaaaaaatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatatcatctcaccccagttaaa
atggctattatcaaaaagacaaaaaataacagatgctggtgaggatgcggagaaaggggaacgctcatac
actgttggtgggaatgtaaattagtacagccattatggaaaacagtatggaggttcctcaaaaaactaaa
aatagaactaccatatgatccagcaatcccactgctgggtatatatccaaaagaaaggaaatcagtatat
caaagagatatctgcactcccatgtttattgcagcactattcacaatagccaagatatggaatcaaccta
agtgtccatcaacggatgaatggataaagaaaatgtggtatatatacacaatggaatattattcagccat
aaaaaagaatgaaatcctgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agccaggcacagaaagacaaatatcgcatgttctcactcatatgtgggagctaaaaaagtkgatctcatg
gaggtagagagtagaatggtggttaccagaggctgggaagggtagggggagggggggaatgaagagaggt
tggttaatgggtacaaaaatacagttagatagaaggaataagttctagtgttcgatagcacagtagggtg
actatagttaacaataatttattgtatatttcaaaatagctagaagagaagatttggaatgttcccaaca
caaagaaatgataaatgtttgaggtgatggatatcccaattaccctgatttgatcattacacattgtatg
catgtatcaaaatatcacatgtacccccaaaatatgtacaactattatatatcaataaaaaaaaaaa
>L1MA4A   3'-end of L1 repeat (subfamily L1MA4A) - a consensus.
ctaatatccagaatatacaaggaactcaaacaactcaacagcaaaaaaacaaataatcccattaaaaagt
gggcaaaggacatgaatagacatttctcaaaagaagacatacaaatggccaacaggtatatgaaaaaatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatatcatcttaccccagttaga
atggctattattaaaaagacaaaaaataacagatgctggcgaggatgcggagaaaagggaactcttatac
actgttggtgggaatgtaaattagtacagccactatggaaaacagtatggagatttctcaaaaaactaaa
aatagaactaccatacgatccagcaatcccactactgggtatttatccaaaggaaaggaaatcagtatat
caaagggatacctgcacccccatgtttattgcagcactattcacaatagcaaagatatggaatcaaccta
agtgtccatcaacggatgaatggataaagaaaatgtggtatatatacacaatggaatactattcggccat
aaaaaagaatgaaatcmtgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agccaggcacagaaagacaaatatcgcatgttctcactcatatgtgggagctaaaaaagttgatctcatg
gaggtagagagtagaatgatagataccagaggctgggaagggtgtgtgggtgggaggggggatgaagaga
ggttggttaatgggtacaaacatacagttagatagaaggaataagttctaatgttcgatagcagagtagg
gtgactatagttaacaacaatgtattgtatatttcaaaatagctagaagagaggacttgaaatgttccca
acacatagaaatgataaatactcgaggtgatggataccctaaataccctgacttgatcattacacattct
atgcatgtaacaaaatatcacatgtaccccataaatatgtacaaatattatgtatcaataaaaaaaaaaa

>L1MA5A   3'-end of L1 repeat (subfamily L1MA5A) - a consensus.
ttaatatccagaatatacaaggaactcaaacatctcaacagcaaaaaaacaaacaatccaattaaaaaat
gggcaaatgatctgaacagacatttntcaaaagaagacatacaaatggccaacaaatatatgaaaaaatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgaggtatcatctcaccccagttagg
atggctattatcaaaaagacaaaaaataacaaatgctggcgaggatgcggagaaaagggaactcttatac
actgttggtgggaatgtaaactagtacagccactatggagaacagtatggaggttcctcaaaaaactaca
aatagaactaccatatgatccagcaatcccactactgggmatttatccaaaggaaaggaaatcagtatat
caaagagatatctgcacccccatgtttactgcagcactattcacaatagccaagatatggaatcaaccta
ggtgtccaacaacagatgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcattcgcggcaacatggatggaactggaggacattatgttaagtgaaata
agccaggaacagaaagttaaacaccgcatgttctcactcatatgtggaagctaaaaaaagttgatctcat
agaagtaaaaagtagaacagaggatactagaggctgggaagggtagggggaagggggggatagggagaga
tttgttaaaggatacaaaattacagctagataggaggaataagttctagtgttctatagcactgtaggat
gactatagttaacaataatatattatatagtttcaaatagctagaaggaggatattgaatgttcccaaca
caaagaaatgataaatgtttgagatgatggatatgctaattaccctgatctgatcactatacattgtatg
tatcgaaacatcactatgtaccccatgaatatgtacaattattatgtgtcaattaaaaaaaaaa
>L1MA6   3'-end of L1 repeat (subfamily L1MA6) - a consensus.
ttaatatccagaatatataaggaactcaaacaactcaacaggaagaaaacaaataacccaattaaaaaat
gggcaaaagacctgaatagacatttctcaaaagaagacatacaaatggccaacaggtatatgaaaaaatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagataccacctcaccccagttaga
atggctattatcaaaaagacaaaagataacaagtgttggcgaggatgtggagaaaagggaactcttacac
actgttggtgggaatgtaaattagtacagccattatggaaaacagtatggaggttcctcaaaaaattaaa
aatagaactaccatatgatccagcaatcccactactgggtatatatccaaaggaaatgaaatcagtatgt
cgaagagatatctgcactcccatgtttattgcagcactattcacaatagccaagatatggaatcaaccta
agtgtccatcaacggatgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgcgacaacatggatgaacctggaggacattatgttaagtgaaata
agccaggcacagaaagacaaataccgcatgatctcactcatatgtggaatctaaaaaagttgatctcata
gaagtagagagtagaatagtggttaccagaggctggggagggtagggggagggggggatggggagaggtt
ggtcaatgggtacaaagttacagttagataggaggaataagttctggtgttctattgcacagtagggtga
ctatagttaacaataatgtattgtatatttcaaaatagctagaagagaggattttgaatgttctcaccac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacaatgtatac
atgtatcgaaacatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaataaaa
>L1MA7   3'-end of L1 repeat (subfamily L1MA7) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaagaaaacaaataacccgattaaaaaat
gggcaaaggacctgaatagacatttctcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ttcaacatcactaatcattagggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaagataacaagtgttggcgaggatgtggagaaaagggaacccttgtat
actgttggtgggaatgtaaattagtacagccattatggaaaacagtatggaggttcctcaaaaaactaaa
aatagaactaccatatgatccagcaatcccacttctgggtatatatccaaagganttgaaatcagtatgt
cgaagagatatctgcactcccatgttcattgcagcactattcacaatagccaagatatggaatcaaccta
agtgtccatcaatggatgaatggataaagaaaatgtggtatatatacacaatggaatactattcagcctt
aaaaaagaaggaaatcctgtcatttgtgacaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaataccgcatgatctcacttatatgtggaatctaaaaaagtcgaactcata
gaagcagagagtagaatggtggttaccagaggctggggggtggggggaatggggagatgttggtcaaagg
gtacaaagtttcagttagacaggaggaataagttttagngatctattgcacagcatggtgactatagtta
ataataatgtattgtatatttcaaaattgctaagagagtagattttaaatgttctcaccacaaaaaaatg
ataagtatgtgaggtgatggatatgttaattagcttgatttaatcattccacantgtatacatatatcaa
aacatcacattgtaccccataaatatatacaattattatttgtcaattaaaaataaaa
>L1MA8   3'-end of L1 repeat (subfamily L1MA8) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaatagcaagaaaacaaataacccgattaaaaaat
gggcaaaggacctgaatagacatttctcaaaagaagacatacaaatggccaacaggtatatgaaaaaatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacgaaagataacaagtgttggwgaggatgtggagaaaagggaacccttgcac
actgttggtgggaatgtaaattagtacagccattatggaaaacagtatggaggttcctcaaaaaattaaa
aatagaactaccatatgatccagcaatcccactwctgggtatatatccaaaggaaatgaaatcagtatgt
caaagagatatctgcactcccatgttcattgcagcattattcacaatagccaagatatggaatcaaccta
agtgtccatcaacggatgaatggataaagaaaatgtggtacatatacacaatggaatactattcagcctt
aaaaaagaaggaaatcctgtcatttgcgacaacatggatgaacctggaggacattatgttaagtgaaata
agccaggcacagaaagacaaataccgcatgatctcacttatatgtggaatctaaaaaagttgaactcata
gaagcagagagtagaatggtggttaccaggggctggggagtgggaggatttggagagatgtctgtcaaag
aatacataattacagttggataggaggaataagttcaagagatctatttgtacagcatggtgactatagt
taataatattgtatttttgaaaaatgctaagacaatgttatgtgctctcaccacaaaaatgttaactatg
tgaggtattaattacctagaattaagcatttgacaatgtatatatacttcaaaacatcatgttntacaga
ataaatacacattttatctgtcaatttaaaaatatattttaaaaacattatagaaggataacaatgtttc
aaatactgtctgtgtctttgtcataaacttggctgaatagtatcaaaatatatagtttttgtgcttggtw
gaatagtatcaanatatatagtttttctgtttttgtcatttaatttgtcagtcataaccatagaaactct
gatatttaccagcatgttctggacccagcacagtgcatgggagaagccaatgtactttagggcttttact
ttaagcttggggcacctggagtttctggtgctgatggtaatggtatggaagacactaaaanggcaggtgt
tgctnatggtcccatgactggccactctgtgaacacagtaaacaagtttgcatgcaaaataactgaggaa
atgttttaatccaaaagctgccatgatctccaaaatttttccagagaaaatgaccaaggagttggctaya
gttaggtgactaagaataaaaactgtagactgaacttcacccactaaaaaaataatawgagaaattcctc

>L1MB1   3'-end of L1 repeat (subfamily L1MB1) - a consensus.
ttaatatccaaaatatataaggaactcctacaactcaacaacaaaaaaacaaataacctgattaaaaaat
gggcaaaggacttgaatagacatttctccaaagaagacatacaaatggccaacaggtatatgaaaagatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatatcacctcgcacctgttaga
atggctattatcaaaaaaacaaaaaataataagtgttggcgaggatgtggagaaattggaacccttgtac
actgttggtgggaatgtaaaatggtgcagccactatggaaaacagtatggaggttcctcaaaaaattaaa
aatagaactaccatatgatccagcaatcccacttctgggtatttatccaaaagaattgaaatcaggatct
cgaagagatattngcactcccatgttcattgcagcattattcacaatagccaagatgtggaaacaaccta
aatgtccatcgacggatgaatggataaagaaaatgtggtatatacatacaatggaatattattcagcctt
aaaaaagaaggaaatcctgccatatgcgacaacatggatgaaccttgaggacattatgctaagtgaaata
agccagtcacagaaggacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctggggggagggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
acaatactgtattgtacacttaaaaatttgttaagagggtagatctcatgttaagtgttcttaccacaat
aaaaa
>L1MB2   3'-end of L1 repeat (subfamily L1MB2) - a consensus.
ttaatatccagaatatataaagaacttctacaactcgacaacaagaaaacaaataacccgattaaaaaat
gggcaaagaacttgaatagacatttctccaaagaagatatacaaatggccaawaggcatatgaaaagatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaaccacagtgagatatcacctcacacccattagg
atggctactatcaaaaaaacagaaaataacaagtgttggcgaggatgtggagaaattggaacccttgtgc
actgttggtgggaatgtaaaatggtgcagccgctwtggaaaacagtatggaggttcctcaaaaaattaaa
aatagaactaccatatgatccagcaatcccacttctgggtatatatccaaaagaattgaaagcagggtct
cgaagagatatttgcacacccatgttcatagcagcattattcacaatagccaaaaggtggaagcaaccca
agtgtccatcgacggatgaatggataaacaaaatgtggtatatacatacaatggaatattattcagcctt
aaaaaggaaggaaatcctgwcacatgctacaacatggatgaaccttgaggacattatgctaagtgaaata
agccagtcacaaaaagacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggagggggaaatggggagttgttgtttaatgg
gtatagagtttcagttttgcaagatgaaaaagttctggagatcggttgcacaacaatgtgaatatactta
acactactgaactgtacacttaaaaatggttaagatggtaaattttatgttatgtgtwttttaccacaat
taaaaaaa
>L1MB4   3'-end of L1 repeat (subfamily L1MB4) - a consensus.
cttgtatccagaatatataaagaactcctacaactcaacaacaaaaaaacaaataacccaattaaaaaat
gggcaaaggacttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcactantcattagggaaatgcaaatcaaaaccacaatgagataccacctcacacccactagg
atggctataatcaaaaaaacagaaaataacaagtgttggcgaggatgtggagaaattggaaccctcatgc
attgctggtgggaatgtaaaatggtgcagccgctgtggaaaacagtttggtggttcctcaaaaagttaaa
catagaattaccatatgacccagcaattccactcctaggtatatacccaaaagaattgaaagcagggact
cgaacagatacttgtacaccaatgttcatagcagcattattcacaatagccaaaaggtggaaacaaccca
agtgtccatcaacggatgaatggataaacaaaatgtggtatatacatacaatggaatattattcagcctt
aaaaaggaaggaaattctgatacatgctacaacatggatgaaccttgaaaacattatgctaagtgaaata
agccagwcacaaaaggacaaatattgtatgattccacttatatgaggtacctagaatagkcaaattcata
gagacagaaagtagaatagwggttaccaggggctggggggaggggaaaatggggagttactgtttaatgg
gtacagagtttctgtttgggatgatgaaaaagttctggaaatggatagtggtgatggttgcacaacamtg
tgaatgtacttaatgccactgaattgtacacttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaataaaaaa
>L1MB5   3'-end of L1 repeat (subfamily L1MB5) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaacaaaaagacaaacaacccaattataaaat
gggcaaangatttgaatagacatttctccaaagaagatatacaaatggccaataagcgcatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctacaattaaaaagacaganaataacaagtgttggcgaggatgtggagaaattggaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactgtggaaaacagtttggcggttcctcaaaaagttaaa
catagaattaccatatgacccagcaattccactcctaggtatatacccaagagaactgaaaacaggtatt
caaacaaaaacttgtacacgaatgttcatagcagcactattcacaatagccaaaaggtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatncatacaatggaatattattcagccat
aaaaaggaatgaagtactgatacatgctacaacgtggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggccacatattgtatgattccatttatatgaaatatccagaataggcaaatccata
gagacagaaagcagattggtggttgccaggggctggggggaagggggaatggggagtgactgcttaatgg
gtacggggtttccttttggggtgatgaaaatgttctggaactagatagaggtggtggttgcacaacattg
tgaatgtactaaatgccactgaattgtwcactttaaaatggttaattttatgttatgtgaatttcacctc
aatttwaaaaa
>L1MB8   3'-end of L1 repeat (subfamily L1MB8) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctgtaatcaaaaaganagacaataacaagtgttggcgaggatgtggagaaattggagccctcatac
attgctggtgggaatgtaaaatggtgcagccgctttggaaaacagtctggcagttcctcaaaaagttaaa
catagagttgccatatgacccagcaattccactcctaggtatatacccaagagaaatgaaaacatangtc
cacacaaaaacttgtacacgaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaataaaatgtggcatatccatacaatggaatattattcagcaat
aaaaaggaatgaagtactgatacatgctacaacatggatgaaccttgaaaacattacgctaagtgaaaga
agccagtcacaaaagaccacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgcctggggctggggggaagggggaatggggagtgactgctaatggg
tacggggtttcttttgggggtgatgaaaatgttctaaaatgattgtggtgatggttgcacaactctgtga
atatactaaaaaccattgaattgtacactttaaatgggtgaattgtatggtatgtgaattatatctcaat
aaagctattaaaaaa
>L1ME1   3'-end of L1 repeat (subfamily L1ME1) - a consensus.
ctngtatccagaatatataaagaacncttacaactcaacaataaaacaaacaacccaattaaaaaatggg
caaaanatttgaacagacacttcnccaaagaagatatacggatggcnaataagcacatgaaaagatgctc
aacatcattagtcattagggaaatgcaaattaaaaccacagtgagataccacttcacacctattagaatg
gctaaaattaaaaagacngacaataccaagtgttggcgaggatgtggagnaactggaactctcatacatt
gctggtgggaatgtaaaatggtacagccactttggaaaacagtttggcagtttcttanaaagttaaacat
anacttaccatatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtccac
acaaagacctgtacgcgaatgttcatagcagctttattcataatagccaaaaactggaaacaacccaaat
gtccatcaacnggtgaatggataaacaaattgtggtatatccatacaatggaatactactcagcaataaa
aaggaatgaactactgatacatgcaacaacatggatgaatctcaaaagcattatgctaagtgaaagaagc
cagacacaaaagactacatactgtatgattccatttatatganattctagaaaaggcaaaactataggga
cagaaagcagatcagtggttgccaggggctgggggtgggggnaggggattgactacaaaggggcatgagg
gaactttttggggtgatggaaatgttctatatcttgattgtggtggtggttacacgantgtatacatttg
tcaaaactcatcgaactgtacactttaaaanggtgaattttactgtatgtaaattatacctcaataaaaa
aaa
>L1ME3   3'-end of L1 repeat (subfamily L1ME3) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaataataaaaagacaaacaacctaattaaaaaat
gggcaaaaaacttgaacagacacttcacaaaagaagatatacgaatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagactgacaanaccaaatgttggcgaggatgtggagcaactggaactctcatac
attgctggtgggaatgtaaactggtacaaccactttggaaaatagtttggcagtttctnctaaagttaaa
catacgcctaccctatgacccagcaattccactcctaggtatatacccaagagaaatgagnacatatgtc
caccaaaagacatgtacaagaatgttcatagcagctttattcataatagccaaaaactggaaacaaccca
aatgtccatcaacaggagaatggataaacaaattgtggtatattcatacaatggaatactacacagcaat
aaaaaggaacgaactactgatacacgcgacaacntggatgaatctcanagacattatgttgagcgaaaga
agccagacgcaaaagagtacatactgtatgattccatttatatgaagttcaagaacaggcaaaactaatc
tatggtgatagaagtcagaatagtggttacctttggggagggttattgactgggaaggggcatgagggaa
ccttctggggtgatggaaatgttctatatcttgatctgggtggtggttacatgggtgtatacatatgtaa
aaactcatcgagctgtacacttaagatctgtgcattttactgtatgtaaattatacctcaattaaaaaa
>L1ME4A   3'-end of L1 repeat (subfamily L1ME4A) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacgaatttcccaacaaaaaaac
ggacaaaggacacgaanagaccgtttacaaaagaagaaatggaaataactancgaacatgaaaaatgttc
aacctcactaataatcaaagaaatgcaaattaaaacaacaatgagatnccgttcttcntcgtctancaaa
ctggcanagatataaaaagataatakccagtgttggtgaggatgtggagaaacgggcactctcatacact
gctggtgggagtataaattggtacaacctttctggaaggcaatttggcaatatntatcaaaagccttaaa
aatgttcataccctttgacccagcaattccacttctaggaatctatcctaaggaaataatcagaaatgtg
nacaaagatttacgtacaaagatgttcaccgcagtattatttataatagcaaaaaattggaaacaaccta
aatgtccaataataggggantggttaaataaattatggtacatccatacaatggaatattatgcagccat
taaaaatnatgttttcgaagaatatttaatgacatgggaaaatgctcatgatataatgttaagtgaaaaa
agcaggntacaaaactgtatatacagtatgatctcaactttgttataaaattacatatataaatgtatac
gtatntacatagaaaaaagactggaaggaaatacaccaaaatgttaacagtggttatctctgggtggtgg
gattatgggtgatttttattttcttttttctttgtattttctgtattttccaaattttctacaatgaaca
tgtattacttttataatcagaaaaaaaa
>L1MC1   3'-end of L1 repeat (subfamily L1MC1) - a consensus.
ctgttatccaaaatatacaaagaactcttaaaactcaacaataagaaaacaaacaacccgattttaaaat
gggcnaaagaccttaacagacacctcaccaaagaagatatacagatggcaaataagcatatgaaaagatg
ctccacatcatatgtcatcagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggccaaaatccagaacactgacaacaccaaatgctggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttacaaaactaaa
catactcttaccatacgatccagcaatcacgctccttggtatttacccaaaggagttgaaaacttatgtc
cacacaaaaacctgcacacggatgtttatagcagctttattcataattgccaaaacttggaagcaaccaa
gatgtccttcagtaggtgaatggataaataaactgtggtacatccagacaatggaatattattcagcact
aaaaagaaatgagctatcaagccatgaaaagacatggaggaaacttaaatgcatattactaagtgaaaga
agccaatctgaaaaggctacatactgtatgattccaactatatgacattctggaaaaggcaaaactatgg
agacagtaaaaagatcagtggttgccaggggttgggggggagggagggatgaacaggtggagcacagagg
atttttagggcagtgaaactactctgtatgatactataatggtggatacatgtcattatacatttgtcca
aacccatagaatgtacaacaccaagagtgaaccctaatgtaaactatggactttgggtgataatgatgtg
tcaatgtaggttcatcgattgtaacaaatgtaccactctggtgggggatgttgatagtgggggaggctgt
gcatgtgtgggggcagggggtatatgggaaatctctgtaccttccgctcaattttgctgtgaacctaaaa
ctgctctaaaaaataaagtctatttaaaaa
>L1MD3   3'-end of L1 repeat (subfamily L1MD3) - a consensus.
tatacatacacatatttcctagctctgtccgctgagagggcctagaatcaatgacaccccagtagcaatg
agcacacctagcatccagatcttggtttctaaataccattctccaataaaaggaaccagggctccttgga
gaaatggctgattctagggctggggcagggaaaatacaagatgagcctggagcatctcgtagtgccagaa
ggtaaggaagtgctcaaaaacaaaaggangggggcatgtcaaaaggacacaggagccaacctgaaagagc
tcccaatggccaaagctggaacaatttgagcaacaaaataaataatgntagtattggattataacccaaa
gtataaaataaatatccatgagtccatactgatataaataaatgattgaataaataaataggggggaagg
gaaacaaatctttcttacagaagaattccaaataatanatgtagaaggaatgagggaagtagaaaatcgc
cattagaacactacngtaataattgccgcaggcaagatccaccgatggatgctaaaattagtgggtgaaa
ctttaaggagaagcnggatatttgcatagcctcaaagtatcttccccaaaatatttattaattattgcgg
tggttttaacatatgtccacaaattagttgatactcctccctccaggaggtggagcttaattcccctccc
cttgagtgtgggctggacttagtgacttacttccaaagaatagagtatggaaagggaaaaatagtaactt
tacagtggagaaacctggcagacaccaccttaaccaagtgatcaaggttaacatcaccagtgataagtca
tgttgatatcatgtaccccctgatatgatgcgatgagaagggcacttcacctctgtggtattcttcccaa
aaacccataaccccagtctaatcatgagaaaacatcagacaaacccaaattgagggacattctacaaaat
acctgaccagtactcttcaaaantgtcaaggtcatgaaaaacaaggaaagactgagaaactgtcacagat
cggaggagactaaggagacatgacaactaaatgcaacgtggtatcctggattggatcctggaacagaaaa
aggacattagtggaaaaactggtgaaatccgaataaagtctgtagtttagttaatagtattgtaccaatg
ttaatttcttagttttgataaatgtaccatggttatgtaagatgttaacattaggggaagctgggtgaag
ggtatacgggaactctctgtactatctttgcaacttttctgtaaatctaaaattatttcaaaataaaaag
tttatttaaaaa
>HAL1B   Primate HAL1B repetitive element - a consensus.
aataaaaaanttagcagaaacannagaagatatggctganaaaatcanagncagaagatgaaatcaaaaa
ggagataaagacgaaancaaagcaattagagagaagntaatagatatggaagacagacaaagnngatcca
acataaggataattgatgtccctgaagtagagaanncaanaaacagganaaagagaaaatttttaataga
tataacanagaaattttcctgaaatgaagaaaaatnaatctgcagatcgaaagaacacaccatgttccag
gaaaattgatacagaatgntcaacactaagacatatcctagttaagttattgaacttcaaggataaagaa
agaattcttcaggcatccaggcagaaaaacaagtcacctacaagggagaaaaatcaggctggcctcagac
ttctccacagcaacattcaatgccagaagacaatggagcaatgtctacaaagttctgagggaaagaaagt
gtgacccaagaatattatacccagccaagntgtcgttcaagtataaaggcaacaggcagacattctcaaa
catgaaagaactcagggaatacagcacccatgagcccttcttgaaaaaactacttgataatgaaatccag
ccaactaagagatgaatcaaaataaagaactcaggaatggagaagccgtggtaaaaggactggtggtgag
cattgaatccatttaaatatagaactaagactaaacaactgtgggaattatggttacagaacagaatgta
aatgttataaaccttgacaatgtaaaaataatataactaacaaaaattgggaggtgggagaggagaggtg
gaaggaagtatgagagtgctaatntcctcatctttcatagcagggagtcaatnnatactgtctaaaattg
aaacatgtagtttaaaaatataatactccaacctcttaatgtttttcataatcttttttcttaaccttag
agggatcttttaggaantaatatctcttgtggtgaagaaacatttatctgaagttcaacaattccttcag
tttcactttagtttctttttcttctgttaaattcaagtaaaattaaatttaatacttttattttaaaata
gcatctgtantatgatccnatttttataaaattatntttntcattctactatccatnctatcttcctatc
tgtatatatgcatagaaagatgtctggaataatgttcaccnaatgttaacgatggttatttctgggtggt
gggatttggggtgatttgttactttcttctttgtatttttntgtattgcttgaattttttataatgagca
tatattattttaaaaaaa
>L1MA9_5   Subfamily of LINE1 repetitive element 5' end - a consensus.
gacatcagcaagatggcggaataggactttccagcgctcgtcctcacagaaacatcaatttgaacaacta
tccacgcacgaaaataccttcacaagagctaaggaaaccaggtgagagattacagyacctgggtgtagca
cagaaataagaaaagacgcattgaagagggtaggaaggacagttttacattacccgcgtcacccctcccc
caancccaggcagcacagcatggagagagataccctctgcttgggggaaggagagggaagtgagcacagg
actttgccttggaccccaaacactaggcccgccccagtaaaacccagtactaggcaggcccccatagccc
cagactccaggccagtacctacggactgagccgyaccagatcccacagcccaggctccaggcctgcctgg
tggactcagtctccaggcctgccccagcaccaggccaaccccagtgccccaggctccagaccggccccag
caccaggccagccccagtagccccaggctccaggctgsccccagcaccaggctggcccccatagccccag
gcttcaggcccaccccagcaccaggctggcccctrcagccctagtcatcaggccagcacctatagaccca
gcctccaggctggcccctgtagacacaggctccaggcctacccagcrccaggccagcccctgtagcccca
ggctccaggcccaccccaggytccagaccagcccagagccaggtyggcccacatagccccaggcttcagg
cctgccccagyaccaggtcagcacccctggcctcagaccttagccaggtaccaggctggcacctgtagac
acaggctccaggcctgcccagtaccaggccagtccctgtggccccaccctccagggcyagcccctgtggc
cccatgctccagcagacccagggttcaggcctgtcccagtagaccccagcactaggctagtccccataga
cccaggctccaggactgtccctgtgtacccaggtcccagggcagcccctatggccccaggacccaggcca
gccctcagagacctagcctctaggccagccctgcagacccagcctccaggctggcacccayagacccaag
ctccaggccatcccccaggttccaggccagcctcagtagctccaggcaccaggctagcacccacagaccc
aggctccagactagccccacgctaccccagcaccaggccagccccaggctccaggctggtccctgtggcc
caggctccagtggacccagggtccaggcctgctccagcagacccagggtccaggcccaccccagtagacc
ctggttccaggctagcccccatggactcaggctccaggaccacccctgcagacccaggctccaggccagc
cccyatggaccaggatccarggcccatytccccagttgcaggctccaggcctgccccagtgccaggccag
cccccatggactcaggctccaggcccatcccagtggacccaggctccaggcccatcccagyaccaggcca
gcccctgyagactcaggctcaaggcccaccccagcaccaggtcagcccctgtggacccaggcttcaggcc
agcccctatagacacaggctccaggccyaccctcatggacccaggctccaggcccayccccacagaccca
atcaacaggtccacccagtggatccaggctccaggcycaaccctgtggacccaggcaccaggcctgccac
ctgctgacccaggcaccaggccagcctgcctaaggactccagcagcaagcctgcctatagaccataccag
atggcctgcccagaatctctggatgactggtgaagggctttcccagacaaagccagtctgcaaagactgg
aataagtccctacttcttcaaatgtgcagacaccaatgcaaggcccaagaatcawgaacaatcagggaaa
catgacaccaccaaaggaacaaaataaatttccagtaactgaccctaaagaaatggagatctatgaactg
cctgacaaagaattcaaaataattgttttaaggaagctcagtgaactwcaagaaaacacagatagacaat
taaatgaaatcag
>L1MDA_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggcaaaagac
ataaacctacagatagattcaagaagctgagtgaaccccaaacaggataaacccaaagaaatccacacca
agacacatcatagtcaaacttctgaaaactaaagacaaagaaaaaaaaatcatcttgaaagcagcgagag
agaaatgacaccttacctataggggaaaaacaattcaaatgacagtggatttctcatcagaaaccatgga
ggccagaaggaagtggcacaacaattttttcaagtgctgaaagaaaagaactgtcaacccagaattctat
atccagyaaaaatatccttcaggaatgaaggggaaatcaagacattctcagatgaagaaaaactaagaga
atttgttaccagcagacctaccctaaaagaatggctaaaggaagttctctaaacagaaaggaaatgataa
aagaaggaatcttggaacatcaggaaggaagaaagaacatagtaagaagcaaaaatatgggtaaatacaa
tagactttccttctcctcttgagttttctaaattatgtttgatggttgaagcaaaaattataacactgtc
tgatgtggttctngcnaaaaatgtatgtagaggaaatatttaagacaattatattataaattgggggagg
gtaaagggacataaagggaggtaaggtttctacacttcacttgaactggtaaaatgataacaccagtaga
ctgtgataagttatgtatatataatgtaatacctagagcaaccactaaaaaagctatacaaagagatata
ctcaaaaacactatagataaatcaaaatggaattctaaaaaaaatgttcaagtaacccacaggaaggcag
gaaaaagaaaacagagaaatgaaaaacagaacaaacagaaaacaaaaaataaaatggcagacttaagccc
taacatatcaataattacattaaatgtaaatggtctaaatacaccaattaaaagacagagagattggcag
agtggattaaaaaacatgacccaactatatgctgtctacaagaaactcacttcaaatataataatatagg
caggttgaaagtaaaaggatggaaaaagatatatcatgcaaacattaatcaaaagaaagcaggagtggct
atattaatatcagataaagtagactcttcagagcaaagaaaattaccagagacagagagggacattacat
aatgataaaagggtcaatccacaaagaagacatagcaaatcctaaatgtgtatgcaccaaacaacagagc
tgcaaanatatgtgaagcaaaaactgatagaactgaaaggagaaatagacaaatccacaattatagttgg
ggacttcaacanccctctctcaacaattgatagaacaactagacagaaaatcagcaaggatatagaagaa
ctcaacaataccatcaaccaataggatctaattaacatttatagaacattccacccaamaacagcagaat
acacattcttttcaagtayccanggaacatataccaagatagaccatatcctgggycataaaacaaacct
caacaaatttaaaagaattgaaatcatacagagtgtgttctctraccacaatggaatcaaactagaaatc
aataacagaaagataacaggaaaatctccaaacacttggaaactaaacaacatacttctaataatccatg
ggtcaaaaaagaagtctcaaaggaaatnaa
>L1MEB_5   Partial L1ME LINE1 repetitive element 5' end - a consensus.
cagacttccgcttccggtaatggtggagtaagctcctaccggaccaaccctcccgcagataacaactata
aactctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaccaaaagcaggcagaaactg
gaggggagtcgacacctggaagaagggaatwgcacggagtgagttcccatttctacggctttttgcctga
gagcaggccgcagttggtgcgtcgtacagatggctaaaacwtcagtagaaaacccgcggtcttactggct
tgaagaaccagagaanagaattcggggcaaccacagccactggaaagtgaggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactccaagcagcccagctaaagacaaaagaactgaactgagattggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagytaactgcctactaaaacaaaagaaacaacac
tctttagagaaaaataacagaatccagagtctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmagataagaagaaacagraaaaatgtaatncatccttaagagaaaagaaaataaaaaccg
accctgagatraaccagatgttggaattaacagacaaggactttaaagcarctattataaatatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtcagtgaacttaaagatagatcaatagaagttatacaa
tctgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgtgcgacaatatca
aaaggtcnaacatanatgtaattggaatcmcagaaggag
>TIGGER5A   transposon - a consensus.
cagacggtccccgacttacgatggttcgacttacgatttttcgactttacgatggtgcgaaagcgatacg
cattcagtagaaaccgtacttcgagtacccatacaaccattctgtttttcactttcagtacagtattcaa
taaattacatgagatattcaacactttattataaaataggctttgtgttagatgattttgcccaactgta
ggctaatgtaagtgttctgagcacgtttaaggtaggctaggctaagctatgatgttcggtaggttaggtg
tattaaatgcattttcgacttacgatattttcaacttacgatgggtttatcgggacgtaaccccatcgta
agtcgaggagcatctg
>TIGGER5B   Non-autonomous DNA transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttactgaayayartacactgtagartayyggttgtttaccctcgtgatcgcgcggct
gactgggarctgcggytcactgycgctgcccagcatcgcgacagagtattgtaccgcatatcgcyagcct
gggaaaagatcagaaattcgaagtacggtttctactgaatgcgtatcgctttcgcaccatcgtaaagttg
aaaaatcgtaagttgggaaccatctg
>TIGGER6B   Non-autonomous DNA transposon.
caggcagtcctcgctttgcacggttccgatatgcataaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccatggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactatgtaaataacagatgcgcatcatgatcagtga
ccaatcacgtcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattggatgtgattagaagatttgaaaatggcaacagcaaagcgaagataggacgagacct
aggcctgcatgaagctanggtacgaaccatattgaaaaagtctgatgaatataaaaaacaaggtaaagtc
gcttcaacatcttttagtttaaattgcactaggaacagaaagccgcttatggttgaaatggagcatttac
ttctactttggattgaagactgtaatnaaaaaacaatcccaatcagtttggctagcattcaggccaaagc
gttgaagttagttgccgcattgaaagaaaacggtaattacaaggagactgaagaagaatcttttactgcc
agtaaaggctggtttcatcatttcagaagttggcatgaattgattaatgttaagctatctggtgaagctg
ctagtgcagataaggatgctgctgtgaaatttgcacccagattccaaggattngttaaggcaggtggtta
tgatgatcgtcaaatatttnatgttgataagacagatcttttttggaaggcaaccccatcaagaacttan
gcgaaaaaagatgtaggatcacaaagtggccattcgagagactctagatatgcagccagaggaacttagt
gaaggcgaacttatcgacataaatgaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaag
tgacgccggcaaaaaacttcacattaaaggaactctcggagatatttcacgacattgaaagcgcaaagga
taaaatgttggaagctgatccaaacttagaaaggagtatgacaattcgccaaggcatagaaaagatgctt
gctccgtatcgtaagttatacgatgagaagaagaaggcaagcactgttcaaactactcttgataagtttt
ttacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattacagtgtactaaataaata
ttagttttactattttttcatttccctatacatttataaccgacagtaagagagtttttaatgttttgac
aaaaatttttaaaggtcacagaacaattgtaatttttcccattgattattaagattgctttgcacggttt
cagcttgcacggtcatttttacggtcccgcactaccgtgcaaagcgaggactgcctg
>TIGGER7   Autonomous DNA transposon.
cagtagtccccccttatccgcggtttcgctttccgcggtttcagttacccgcggtcaaccgcggtccgaa
aatattaaatggaaaattccagaaataaacaattcataagttttaaattgcgcgccgttctgagtagcgt
gatgaaatctcgcgccgtcccgctccgtcccgcccgggacgtgaatcatccctttgtccagcgtatccac
gctgtatacgctacccgcccgttagtcacttagtagccgtctcggttatcagatcgactgtcgcggtatc
gcagtgcttgtgttcaagtaacccttattttacttaataatggccccaaagcgcaagagtagtgatgctg
gcaattcggatatgccaaagagaagccgtaaagtgcttcctttaagtgaaaaggtgaaagttctcgactt
aataaggaaagaaaaaaaatcgtatgctgaggttgctaagatctacggtaagaacgaatcttctatccgt
gaaattgtgaagaaggaaaaagaaattcgtgctagttttgctgtcgcacctcaaactgcaaaagttacgg
ccacagtgcgtgataagtgcttagttaagatggaaaaggcattaaatttgtgggtggaagacatgaacag
aaacgtgttccgattgacggcaatcgggttgcgccagaaagcattgagcctatacaaagacttcagcaag
ggatcccctgaaacgagtgacaccaagccatttactgcaagtaagggatggttacacagattcaggaata
ggtttggactgaaaaatataaaaattactggagaggccgcatctgccgatgaagaagctgctgccacatt
tccggcagagttgaagaagttgattaaggagaaaggataccatccaaagcaagtcttcaactgcaatgaa
accggactcttctgggagaagatgnccaatagaacctacattcataaaagtgcaaaggaggcaccagggc
ataaaacatggaaggacagattaactctggtactatgtggcaatgctgcagggcatatgataaagccagg
cgtagtgtacagagcaaagaacncacgcgctctcaaaaacaaaaccaaaaattatttgcccgtgttctgg
caacataatcagaaagcgtgggtgacagccatcttgtttatggaatggttccaccaacgcttcatcccag
aagtgaaaaaatacttggaagaggaagggctggaatttaaagtcttattaataatagacaatgcacctag
ccatcctgaatctgtttgctatgaaaatgaaaatgtcgaggttgtatttttacctccaaatacaacctna
ttgcttcagccccttgaccagggcatcatttggtttgtcaaggccacatacacccgcctggtatttgatc
gcattcgatcagcaattgatgcagaccctaatctggacataatgcagtgctggaaatcattcactattgc
tgatgcaataacattcatcaaagctgcaatggatgaattaaaaccagaaactgcaaatgcctgctggaag
aacttatggagtgaagtcatgaatgattttaaaggcttcccggggatcgatggagaagttaggaaaatca
ttcatgcagcaagacaagttggtggagaaggatttgccgacatgcttgatgaagtggaagaacatattga
aggccatcgagaagtgttaacaaatgaggaactggaagaacttgttgagtcatctacagaggaagaggaa
gatgaagaaaaaactgaagcagaaccagcaatgtggacattaccgaaatttgctgaagtgtttcaaattg
cacagacattaaaggacaaaattatggaatatgatcctcggatggaacgcagcattaaagtcacccatat
gatcaatgaaggattacaacctccgcagcaacactttgatgagttaaaaagaaagagacaacttccgatt
acaatgttcttccaaaaggtttcggcaaaaaaaccttcaactatcgaggatccccagccatcgacatcgt
ctgctcctgacatccaaccatcgacatcgtcatggctcgatgatccaggatcacccgaagcagatgatcc
tccttctgacgtatcgtcagaaggtcaatagtagcctaacgctacgtcacaatgcctacgtcattcacct
cacttcatctcatcacgtaggcattttatcatctcacatcatcacaagaagaagggtgagtacagtacaa
taagatattttgagagagagaccacattcacataacttttattacagtatattgttataattgttctatt
ttattattagttattgttgttaatctcttactgtgcctaatttataaattaaactttatcataggtatgt
atgtataggaaaaaacatagtatatatagggttcggtactatccgcggtttcaggcatccactgggggtc
ttggaacgtatcccccgcggataaggggggactactg
>MER44D   Nonautonomous DNA transposon.
cagtagtccccccttatccgcggtttcgctttccgcggtttcagttacccgcggtcaaccgcggtccgaa
aatattaaatggaaaattccagaaataaacaattcataagttttaaattgcgcgccgttctgagtagcgt
gatgaaatctcgcgccgtcccgctccgtcccgcccgggacgtgaatcatccctttgtccagcgtatccac
gctgtatacgctacccgcccgttagtcatcgacatcgtctgctcctgacatccaaccatcgacatcgtca
tggctcgatgatccaggatcacccgaagcagatgatcctccttctgacgtatcgtcagaaggtcaatagt
agcctaacgctacgtcacaatgcctacgtcattcacctcacttcatctcatcacgtaggcattttatcat
ctcacatcatcacaagaagaagggtgagtacagtacaataagatattttgagagagagaccacattcaca
taacttttattacagtatattgttataattgttctattttattattagttattgttgttaatctcttact
gtgcctaatttataaattaaactttatcataggtatgtatgtataggaaaaaacatagtatatatagggt
tcggtactatccgcggtttcaggcatccactgggggtcttggaacgtatcccccgcggataaggggggac
tactg
>MER69C   hAT-like DNA transposon - a consensus.
cagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccgcaatcggttaagaccgctgtctctttccactccgacttcccctccgtcacacttcccc
tcgtgtcgggtggcgttggagtggccgtgggcattttngggatccggctaaggggaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtgtaggaatggcttccaggaatactcctactgcccactgtgccgactcacccggc
gtcgtgacacgaaggtgcagggccagaggtcgtatcgcgatatgaacgtgtcctacggcacctggcaccg
gaagtatgtgggtagtggaggagaaacaaggtttgaaatgtatggagccagaagctagtctgtggaaaat
tcttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgacgcctagtcaaaacgg
aagttctctcctgtcaggaatatactcgataatgcagcgtatacaattataaatgcaccatacatttttt
ttcattttttgatgggaatcacgcgaaatagaatttatcagaattcctgtgtttgtagggcacaaacctg
tagcagtactacaaacagcgagnacatctgtgtgtgaagtcgcatgttttatgcatcccaatatattgga
tcgtgtctttagcgtatctgatgcatcttgccctgacgaagtctggcggttccngacgaaacggcacgca
aaattgccactaacgcagcgaaatggcctgaagaaacaagtgttccagtgacaaaactcctanacatatt
catcaataagtcaatgtatgtagtataanagtaatttgattacacaattatgtanctcaatacaatgtag
cggcaatttnaaaatgccttaatttcanatgaattttgtnttgttcttcagaattgttgatcataccaaa
attcaaatatgatgaggaagcantagtctaaggaacgacaaanatgtaaaccgaaagaaaggatatgggg
ganagcttcaaaatgtcaaaaaccctcatttatcacaacggnaantaaaaactctgatngtcnnaatcat
gaagacaagaaaataagatcagaatanccaagaaaatntaggtaataaaaatgacagaagaaaaaagaaa
gttatgngaattggtacacttttaaacaggaaacaaagacgagaagaaanatgaaagaaatacaatntat
ntgaacatnagtagnanatgggtaatgnnnnnnnnnnaagtttgaatatgccattttaactacaatttgg
aaagatgttttggaacgtttcaataaaacaagngagaaattacagactcctgatttggatatacatgaag
agtatcttcttttgtcatctttaaatttattaaagaaccgagagaaaattcagataaaaataatggaata
tgaaacaaaagcaataaagatgaataatgaaatcaatagaaattattctgacatcgagaagcgaattgta
acaaaaaaattttcagatcataccaaaagcagtaattcattaagaggaagagataaatttcgaatagaag
taatgaataggctcttggattgtttgataatccaattaatgaagaggagtgaatcatatgaacacattgg
gaaaagatttaaatttcttgctgatttgacacgaaatactgacatcgacgaagataacataaaactcata
atacgccactacaacgaggacatcgacgacaaactggttaatgagtgtcgtcaattcaaagagtatttaa
gattagtcactgcacaagaaaacttgaaatgccctgaaatcttacagctcatatatgaaagaaacttgat
agaggttttcccaaatttgacaacaatcctaaaaatttacatgacattaccaataacgagttgtgaagct
gaaagaaacttttctaaactatcaataataaaaaacaaattttgatcaaccatgctagaggaaagactga
attatctttctattctctctatagaaaatgatattacaaaatcattgtcatatgaagaggcgatcaaaga
gtatgcagccaaaaaatgtagggaaaaagtattatagaggtgtgtcaggcagttaattaataaaaatatt
atgttatttttctggattttgtgatgtttgtggtatttgtcagctttttaaaatttgtaatttgttgtga
tttnttttctcattctaaataaatattcacttttgtacctaattttgtatttgtaattttgtattctttt
tcttaaagagggccccccaaattgtataagcttcaggccccacaaaacctggatccgcccctg
>MER106B   MER106B is a nonautonomous DNA transposon - a consensus.
catgcattctcaacgggggcgatatcgcccccaagggggtgaaaattggttcttggggggagaaaaaatc
ttagatattacaatggtttgtggccctccaaagctcaaccctacccgacaaaatcttattccttagtatt
taatttctcnttgggttttcttgggtatcacacgagcagcactgacattgagttcatggaagatacacga
aatgtatgcaagatcagtgctacaaaactatggcgaatagatgactgtggttggaggactttcttcgatt
gattgctcgatctcgaagtcatatngcgagaggtggcctgtgcgtgcctgttggctgccactggctgcct
tgtggatgttatttatgtttgatcctcagtgctttgtgtgacttgggctttgagaattaaataaaantag
tttatattttattatttaattctacaaaagttattcaacccatcattaattatgtcaagtgctgaaaaga
aaaaatgttgacaatatctgaatgaatatctagcagctagttaagttaaaagttattttctcatatcaag
caaaagttaaaagttaacttcaaaaataattttnaagaaattaatttaattttttcaattgttttacttt
tgctggaaaaatcagttttgaatgaattttttaagtattgattacattgctattaatgtatttatataaa
ttgctaatttgtatatgtaatttgacacantagaatttatgtaagtaaataaattacattaaaagttact
cagcaaatacagttacaaagttaaatttagatattaatagctttttaatttttaatttagcttttaactt
aaaattttattcagtcattcttaaccctncattgaataaaaagagaggctttatacttaccctttttatg
tataaagcacagatataggcgcagtacataaacagatatacagtatatctgtggtattaaaatttcatgg
ngggggggggtgattaggaaaaaaatgtctaaaaaggctccttaggggggcgataatgaaaaaaggttga
gaaacactg
>CHARLIE2A   DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacgtaaagactttccaaggggtacgcgggca
cggatagttttaagggaatcaatttccagatcctcaacttccatatgtactctttcctaaaactgatctg
cctgagaacgtacctgtggcgaagtctgccctttcccacttcccctttcacaattgcccttctcccactt
tacaaaagaaaggcatatctctcacccatcccgaatcttactatggtgcattgccccggggtgtaaaaac
ctccagggcgccaaacaaagggacaattcgaaatattggtgttggggaagcctcctttaatgattaatca
aggcaccataaacccatggtagggcttcctgtctttccctgtcttatacatatttctgttaagggtgaag
catggcgttagaaatggggtattttggcccgtgttgggatgttctgaattcagatatattgtagagtggg
gcagtggaagtgatgacaattttcgtttaatgaccttgcctcttccattccccgactattgtcaaagaat
gcattgctcctgagggagagtcccgtgagagcaaagcaaagagagcatcggtaagaaatactgaatgcta
aaaacggcattttttcacatatttaaacgtaagcaattcttttcagctattctcaacactcatccctagg
atgtgtcattagctggaaagaaaagcaacttcgaacagccgaagcagtataggttagtgacgctgattct
tttaaatgtaactggaatgttttctaggactaccaaatttttcaagatacattggataaaacccgcggat
aaaanttttacatgatttctttcagatttggtgtgcattattcaataaggtagttaaaacctattttatc
aaatcatatcatgaaatatttattccaattacagtcaatcctcatcttatttcatcttataaaatgttta
atattttctacctcctattaacaaaaaataaaattatatgctagctgccggaccgattagtttttagcag
tatatacctttttctttcattaaatacataggaaaagtttgatcatnatgtctaataaaattaatggagt
tatttctgatttttatacatgattcttatttaattattcccaaaagccgaacaccagagttcaatataca
catgcacacatatttacnaaaggaataccatgncttttatcatactccttgcttcataaataacttataa
ttttagctacanattacattgcattattncaaattaagtaatgagaaacagcatantgatttattatctt
gtttttataacttactataaaaatagatnaattatattagatctacatnattttaatcttgactgctttt
agtaatctatcttataagatacattccgtaatttatttctcagtaatttttataatattccttaaaatgc
atattaacacatttatttgaattgaaaaatgaagtcagactttttctgacagaaagtaagtctgatttgg
ctgattggtttgacaatgaggactggctttgccaattaggttatatggcagacattttccataaattgaa
tgagctaaatctgcagctccaaggttttgacgaaaatatatttaaagcacgtaataagataaaagcattt
tntcaaaaaatattgtattggcaaaggtgtantgaaattaacaatatttcaattttcccaaccctttctg
agtatattggattaaacaaggtgcctctaagtgaaagagtaacaggtataattaatagtcatttgataag
tcttggtaaagcctttttggtatacttcccagaaattgagaaagtgaatgactctaatgactgggtaaca
aatccttttgcaagtcaggtggtttccaattctttgctttcaacaaaattgaaggaggacctaatcgagt
tgtcagctgatagatcattaaaaataatttttgatgatagatcactatgtgatttttggcatataactcg
gaaggagttcaaagaattgagtgacattgctataacaaaactccttccattcccatctacttatttatgt
gaacaaggtttctcagcgcttacatctataaaaatgaaaaataggaatagaattgatgctgaaccctgtc
tcattctagcaataagtaatattcatccacggatacatgaactaattgggaaaanaaagccccatccatc
tcattaagagatgcatttccaataaaattttactttttatgtttaatatttatcaaaatttgtaatatat
ttatgttgttttgatcaattgtatactaataataattgtaatgataactcaatccagaagaaaattttta
acacttagagccttatggtcacaggaaatataaaaaattaaatttcaatttatatacatatttttgttgc
agagaagtatgatagggtgatcaataaaagactttcaagcataaaaatatattacattaggataaaattc
tgtgggggaagtggaatggaaatatgagttcaaggagaaaaagagaacgatgtaaaatttctgactgtta
aagaagagcttgttcatgtattttttaaatggatgatggtgggtatcaaatcgctatggtatttagattc
cattggatacatttaaaagagtgatgtaacagttttattttaaaatgtcaatatttacaatatgccagaa
attacatcctttgcaactatttaaacttatgatgaaaaattttagatgtcaacttaaaaatgtgcgaggg
ggtacatagtttttcaaaattcttttagggggtatgcgagcaaaaawgtttgaagaccactg
>CHARLIE2B   DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacgtaaagactttccaaggggtacgcgggca
cggatagttttaagggaatcaatttccagatcctcaacttccatatgtactctttcctaaaactgatctg
cctgagaacgtacctgtggcgaagtctgccctttcccacttcccctttcacaattgcccttctcccactt
tacaaaagaaaggcatatctctcacccatcccgaatcttactatggtgcattgccccggggtgtaaaaac
ctccagggcgccaaacaaagggacaattcgaaatattggtgttggggaagcctcctttaatgattaatca
aggcaccataaacccatggtagggcttcctgtctttccctgtcttatacatatttctgttaagggtgaag
catggcgttagaaatggggtattttggcccgtgttgggatgttctgaattcagatatattgtagagtggg
gcagtggaagtgatgacaattttcgtttaatgaccttgcctcttccattccccgactattgtcaaagaat
gcattgctcctgagggagagtcccgtgagagcaaagcaaagagagcatcggtaagaaatactgaagatgg
cagtgccttatttcatccaggtgacaaactcatggcgaggtctttttgtctcaganttngaatattcaag
atttgtaaaaagtatnctgggaaataccaatnwgctacgaagcatancttctctgcattttcaccattct
cagtawtgagaaagagcctggtgagtactctcattcacctgcgtcttaatctgtgtctcagttgcatatt
ttgcatgatttcaaggaggtggaggcgaaaagctccgcatttacttccaacagatcaacgtcacatcttc
aagnaaangaaacacatattggaggtaagttagtgttttatattttcttaaacatttattcagacttgta
ggagaaacattttcattaacttttgccaaagattnctggatactgtaaanctatattcattttttacttg
ggcacaagtctcctgctcgctgtcactcntcaaccacttntctgctcatttattcattcctgccatgtac
ttattagatttagattaacttaacgggaatatgttgtggattctactgtaaataatgcacttaaaacaat
cattaatncaccttttgtaagccctatacttactagtggcccaataccttctctctccttttgctgttaa
tttccacaaagtagattaaantgcactcttaaaagtagaacatttacttatgtacgggtgtaggacaaaa
tgttcccaaaatgcaatctaggacgtaatgccctgaactttagaaaaccagcttcatttaattaggatta
atttctccctctcagatgttgatatgctgttctaattctgtcaaatgcataattataaacaatcattttc
aacnatgaaatgaaattactaatccatatatacataaaaactctcaagnatgtntctctgtctatctgtc
acgtctttttaaggtgctttgagacgacctggaaaaatgaaatttggcatgaatatataggtctttgttc
acagtcaatgggaaaagtcctaaaatgcacaatttaatttttttaggctgatataatctacttgtagctt
canaaacaaggtgcctctaagtgaaagagtaacaggtataattaatagtcatttgataagtcttggtaaa
gcctttttggtatacttcccagaaattgagaaagtgaatgactctaatgactgggtaacaaatccttttg
caagtcaggtggtttccaattctttgctttcaacaaaattgaaggaggacctaatcgagttgtcagctga
tagatcattaaaaataatttttgatgatagatcactatgtgatttttggcatataactcggaaggagttc
aaagaattgagtgacattgctataacaaaactccttccattcccatctacttatttatgtgaacaaggtt
tctcagcgcttacatctataaaaatgaaaaataggaatagaattgatgctgaaccctgtctcattctagc
aataagtaatattcatccacggatacatgaactaattgggaaaanaaagccccatccatctcattaagag
atgcatttccaataaaattttactttttatgtttaatatttatcaaaatttgtaatatatttatgttgtt
ttgatcaattgtatactaataataattgtaatgataactcaatccagaagaaaatttttaacacttagag
ccttatggtcacaggaaatataaaaaattaaatttcaatttatatacatatttttgttgcagagaagtat
gatagggtgatcaataaaagactttcaagcataaaaatatattacattaggataaaattctgtgggggaa
gtggaatggaaatatgagttcaaggagaaaaagagaacgatgtaaaatttctgactgttaaagaagagct
tgttcatgtattttttaaatggatgatggtgggtatcaaatcgctatggtatttagattccattggatac
atttaaaagagtgatgtaacagttttattttaaaatgtcaatatttacaatatgccagaaattacatcct
ttgcaactatttaaacttatgatgaaaaattttagatgtcaacttaaaaatgtgcgagggggtacatagt
ttttcaaaattcttttagggggtatgcgagcaaaaawgtttgaagaccactg
>CHARLIE7   Molecular fossil of a hAT-like DNA transposon.
cagtggtctccaaagtggagtgcgtgcaccccagggagtatgcaagatgatccattggggtgcaggaaga
aaatattagaacttctatttatatttattttatctaaaaaataagaaaaaaattaagctttactaatatt
taatatatggattgacactggcgccctcactcggtctntatgtcagacggtcacatgtcacatgngatac
gtgaggtatcctgagggaagagtggaagttccacantgnggaggggttgacagtggcgccctcactcgtt
catttgctttcagcatattgcgatatattgcagtttacatgtgcctagttaagtggatttacggattata
ttatctagttttaactaaactaaccctcacaaaatggacaagtggcttaaaaagattcctgcaaagaaac
cgcggattgaagataatactaataatgcaagcacaagcgaacaacaagaaaatggcagagctgacacttc
tcctcctagtacgagctcttcgtcagccacattacgaggtaaaaacaatgacgatctaatcagatctgac
aagaagtcagcaaaaaagnttgaaattatcaagaagactatttgaaatatggatttacatccactatcat
taacgatgaacctcgccctaagtgtatattgtgccttgagatattagctaatgatagtatgaagccatca
caattagcaagacatttaaaaatgaagcatccagaacatgaagacaaancctctataatttttcagcgat
gtttaaagtcatgtgatactcaatccagtactttacaaaatttcactaaacttaatgataantgtttaga
agcctcttttgaggtttcttactcaatagaaaaaaaanaaaagccacataccattgggaaaacgcttgtt
cttcctgccacagtaaaaatggctgaaataatacgtagaaaacaatatggcgacaaactaaaatgcattc
ctttgtcagcaaatactgttggaagacgcatagaaaacattgctgaagatttgaagaaacaagtattaga
acaaattatgcagtgtgggaggtttgctatatanttggatgaaagtacagatgtttctaacatgtctcag
cttgtggtatttgctagattctgtttcaataatgaaatacataaagaactacttttttgtgagccactaa
aggaaagatgtnccggagaagatatattctcaacagtaaatgacttctttaatgaaaacaatgttttatg
ggaaaacngtataagtgtanccattgatggagcagccgctttgactggaatannaaaagaattccggggt
aaggttacagagacagcaccacangtgaaattcattcactgcatcattcayaggcaagctattgcagcaa
agaagttgaagccagaggtacacgaagtgctacaggatgtcatcgatgtggttaattttataaaaacaag
acctttaatatacagtagaatctttacaatactttgtaatgagatggggagtgaccatgaaaatcttttg
taccacacagaagtttgctggttatctcgtggcaaagtacttaaaagagctgtcaaacttaaagatgagt
tatacatttttcttttacaaaaagacaagtgttccaaatttgctgaccttttctgtgatgacaagtggct
gtcagtagtatgctacctagcagatatttttgaaaaaataaacacacttaatctgtcccttcaaggtaaa
ggtgacattttaacaatgagtgagaaagtaactgcttttcgaaagaaactcatgctatggagagagcatt
ttgaaaatagatgtttggaaatgtttccatcgttatgtgattttgttgctgaaaacgatgtaaatgtgtc
acctataaaaattctcatatctgcacactttaaaaacttggaaacagaattttctaacctgtttaaaaat
cttccaaatgaagagtttcagtgggttttgaacncatttgttaaaaatatnaaaatgcaacaccttccga
ttagtttgcaagaacaactgattgacatcagggaagatggaaatttactagccgaatttcaacaaaaacc
tttgcataattggtggatgggattgaaaaatgagtatcatgatttagtaagcgcagccaacgatgcactt
cttccatttggatctacgtatctttgtgaggtatctttttcagctatgacagccattaaaaccaagtatc
gaaataaactgaacttagaaccagaccttcgaatcgctgtatcacaaagtgttaaaccaagatttttaaa
aataatgaagcatattcaatcacattgctctcactaaaaatattaatagtaatgttttaatgagagcaaa
aggttttgtactattaaataatnaaatanaaattattttaaaatattgtttatttcatctttatctcatc
cttttaaaatttctantttttgtgtatgttttataatgtacataatatattagtacatagtacatgtata
taatttataaataaatatatatatattgggggtgcatgctcaaaattttttactgatggggatgtgcgat
caaaaaagtttggagaccactg
>CHARLIE8   Molecular fossil of a hAT-like DNA transposon.
cagaggtcgcaaactggcggcccgcgggccgcagatgtgttttgtttggcccgcacagtgttttnaaana
tttttgaattagttgccaacatttaaaaatcgggagatttcacataaaaatctagatttctggcttctct
tgaaaaatcagaagatctggcaacactgggcccgcattcccacatggcaacaattggctggagctgagta
gcagctgccccctttagacagggcatgtgctctccagtttgccacagtccccacctggcccnccgcttcc
aggtccagccaccgttgtcatcaggcttgcgctgttgttttcctcatagtagcgataagagaaaagtgaa
atatttcttgtacccattgtctctgtcaaaagtgggaaaacgaaagatagaccaagagggccgcgtgttt
caagaaaagtgggagagagcatatttctttgtggaagtgaagaatattcctacatgtctaatatgcaaac
aaagcgtgtctgtgtcgaaagaatacaacctaagacgccattatgaaacaaaccatggcaagaactatga
ccagtatacggaaaagagtgcgtgatgaaaaacttaacgaactgaaaaaaggactgaaatttcaacaggg
tttgtttttgaatgcgaataaaataagtgatgctgctatggaatgcngttatgtattaagtgaaaaaatt
gcccgggcatcaaaaccttttacagatggcgagtttataaaagatgtttattgaatgcagcagaaattat
gtgtcctgaacagaaacaagcatttgcaaacntaagnctaaccggaaatactgttgctcagngtgttgaa
gatatggctgagaacttacaggacaagttgcgtgaaaaagtnaaatcntttgtggcgttttctatcgcag
ctgatgagagcacagatataaataataccacccagttagctatatttatccgtggtgttgatgagaattt
tgatgtgaccgaagaacttttggacanggtgcccatgacaggcacaacatcaggaaatgacttatttttg
tgtgttgagaaaagtcttgaaaagttcnatgtngactggtcaaaattagtaagcgtgaccacagatggtg
ctcctgcgatggtcggtgttaanaacggacttgtcacaaaacttaaatccaaggtggcaacgttttgcaa
ggacacggaacttaagtctgttcgttgcatcattcatcaggaancgctttgtgctaaaaagttaaaaatg
gancacgtcatggatgtggtaattaacancgtgaactggatatgctcccgtggcttgaaccacaganagt
tcagtgctttgcttgatgaattagatgcacgatatggtagcctgctgtactacatggaagttcagtggct
nagttgtggnatggtgctaaagagattttttgaactgttggaagaaatcgacttgttcatgtcatccaaa
gggaaatcccngcctcagctcaccggcaaagattggatcaaagacttggcctttttggttgacattacaa
cccatctaaatactttgaatatttctctgcagngacgttcacaaatagttacacaaatgtatgattngat
tcgcttgttcctagcaaaattgtgcctttgggaaactcatttggcaaggaataatctggcccactttcct
acgctgaaattggtttccagaaatgaaagcgatggcctgaactacattcccaaaattgtggagttnaaga
ctgaattccaaaaaaggttctctgacttcaaactttatgaaaatgaactaacattgttcagttcgccttt
ctcggcgaatattnacagtgtgaacgaagagctacaaatggaagttattgaactgcagtgcaacacggta
ctgaaaactaaatacgacgatgtnggaatnccagaattctacaaatatctcnggagtagttncccnaaat
ataaaaaccattgtgcaaagattctatccgtgttcggaagtacctatatttgtgaacagctgttttccat
tatgaaactgaataaaacnaaacattgctcccagttaaaggattcaaggctgaattctgtactgcacgtc
gcaacgtgatggagagagaantcctggcatgggccctatggnagggaangctcgagtcttccggtctcaa
agnattgngaaatganaaaatnaataattaaactatttctattttcaatttgtatttttccattttgaat
tagaaatataatctccagtatcatacatgtttgtattacgttntatgcntcactattcaataaaaatcaa
gaaagttnnattatatttctggcggtcgacttttcttatgcctggcccncttcactcatttatgttacct
gcctggcccctgtaggcatttgagtttgcgacccctg
>CHARLIE8A   Interspersed repeat CHARLIE8A - a consensus.
cagaggtcgcaaactggcggcccgcgggccgcatccggcccgcagatgtgttttgtttggcccgcacagt
gttttnaaanatttttgaattagttgccaacatttaaaaatcgggagatttcacataaaaatctagattt
ctggcttctcttgaaaaatcagaagatctggcaacactgggcccgcattcccacatggcaacaattggct
ggagctgagtagcagctgccccctttagacagggcatgtgctctccagtttgccacagtccccacctggc
ccncttcactcatttatgttacctgcctggcccctgtaggcatttgagtttgcgacccctg
>MER63D   Primate MER63D repetitive element - a consensus
cagtggtgtgctggtaaatgtttaacaactggctctctgggggaaaaaatgtatgtatgtatatacatat
ataagtttattataaattttactgatataaaggatgtgtagcacacaatttacaaataataataaaatat
acaatactctttattgtaaattccatatagccaattgattctcacagaatgcttttattgatttttgccg
aactcttgtatccgtagccaacctatggttgcaattgacgaacgagtgtagttccaacatgaatgttggt
tgatattttcgtttacattaatgagtaagannangatttgacaaatggagttgcatcccaatctataact
ctttccaataaatttantttcataataactgatgtgatctactgttaaactatttctcaccttcgtanaa
attatattnattaaagtaagacgaaagtgaaacaacgaagacgtatgtcggaacttcactcgttcgtcaa
tgatgtgagcgacttctttgctgaatcggataatagttttcaaatactggaagaatatttcctcaatttt
ttgtgctattcacaatgtaacggctacagacacgacacacttttaagtttaatctgcattattaacattt
tctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctgatttgtagcgtttgcc
aatttccgtggtgtaaatactcccaccatggccgatttcaagctaccaacgtgacgtcactgaacgcgga
gttgggaagagatgcgcagtagcacaccattatatagtatttccaccatacagatacaatagacgtaaat
aacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatgagttttgagtatttat
tacctttgtttttaatataatttatttaattgtaagtttatataatttaatttttaataatggctgtgtt
taacaaccggctcgcaaaattcctgaaaatttaacaatcggctctcgcgagccggtatgagccggctcca
gcacaccactg
>MER97A   MER97A repetitive element - a consensus.
cagtggcgtaccaagggcggggcggtgggagcggtccgccccaggtgcaggcaataagggggtgcattgt
ctgtagagaatttaaaaacaataataaaactgactaaaagtcggtctgctttttattatcaccatgcgcc
ggcaattctaaacaatgtcagtgataaaatactcctcccnnaaaaatcttttgttggtctaagttctaaa
caattgctgcggttactgttgagttttaataatatatatatgtaaacttcaaattagcacatttttatta
cttatcctttaataaacattgtattctacatggaagttaattcggagaactcccagttatacagtcggcc
cccgacacacgcggactcagctacacgnattcgtttcgagagtaagttcataanggttcggaatcattcg
agctcgcttcgggtncagttcntgtctccaacccctgtggtactacatattcctgcgtttaaacagtaga
tttnaaataaacaatgatagcacagtgattgtaaagacgaagaaacagaacttgagttacttcaattctg
tcattctatgtgaccacttggagtttttatttgtgtttaaaatttaaaacagtgaaacagagtgcgaact
gcgaggtgtaatatttttgtttggtaagtgcaaattttagttcatacatgaaatattttactgaatttga
ataatatctttaaaatngaaatttattcttcttnaaattgttaattatttgttttaaaactaaagaacaa
aatcaaaaaaatgattattactgattattacatgattattactgaaaataattttgtcatatagaggaag
ggngtgttaaaaaatgatccgctctgggtgtcgaatacgctaggtacgccactg
>MER97B   MER97B repetitive element - a consensus
cagtggcgtaccaagggcggggcggtgggagcggtccgccccaggtgcaggcaataagggggtgcattgt
ctgtagagaatttaaaaacaataataaaactgactaaaagtcggtctgctttttattatcaccatgcgcc
ggcaattctaaacaatgtcagtgataaaatactcctcccnnaaaaatcttttgttggtctaagttctaaa
caattgctgcggttactgttgagttttaataatatatatatgtaaacttcaaattagcacatttttatta
cttatcctttaataaacattgtattctacatggaagttaattcggagaactcccagttatacagtcggcc
cccgacacacgcggactcagctacacgnattcgtttcgagagtaagttcataanggttcggaatcattcg
agctcgcttcgggtncagttcntgtctccaacccctgtggtactacatattcctgcgtttaaacagtaga
tttnaaataaacaatgatagcacagtgattgtaaagacgaagaaacagaacttgagttacttcaattctg
tcattctatgtgaccacttggagtttttatttgtgtttaaaatttaaaacagtgaaacagagtgcgaact
gcgaggtgtaatatttttgtttggtaagtgcaaattttagttcatacatgaaatattttactgaatttga
ataatatctttaaaatngaaatttattcttcttnaaattgttaattatttgttttaaaactaaagaacaa
aatcaagaaaatgaagcattacaccagtggtatgntttwgtagttgcctaaattgtaccttttgcagacg
ttttagttttmttaaaattggcmttmtgatttttactgtcttaactatacacaaaagttnataaaanaaa
ttttnaantntttntatttttgawgcattattattattactgattattacatgattattactgaaaataa
ttttgtcatatagaggaagggngtgttaaaaaatgatccgctctgggtgtcgaatacgctaggtacgcca
ctg
>MER97C   MER97C repetitive element - a consensus.
cagtggcgtaccaagggcggggcggtgggagcggtccgccccaggtgcaggcaataagggggtgcattgt
ctgtagagaatttaaaaacaataataaaactgactaaaagtcggtctgctttttattatcaccatgcgcc
ggcaattctaaacaatgtcagtgataaaatactcctcccnnaaaaatcttttgttggtctaagttctaaa
caattgctgcggttactgttgagttttaataatatatatatgtaaacttcaaattagcacatttttatta
cttatcctttaataaacattgtattctacatggaagttaattcggagaactcccagttatacagtcggcc
cccgacacacgcggactcagctacacgnattcgtttcgagagtaagttcataanggttcggaatcattcg
agctcgcttcgggtncagttcntgtctccaacccctgtggtactacatattcctgcgtttaaacagtaga
tttnaaataaacaatgatagcacagtgattgtaaagacgaagaaacagaacttgagttacttcaattctg
tcattctatgtgaccacttggagtttttatttgtgtttaaaatttaaaacagtgaaacagagtgcgaact
gcgaggtgtaatatttttgtttggtaagtgcaaattttagttcatacatgaaatattttactgaatttga
ataatatctttaaaatngaaatttattcttcttnaaattgttaattatttgttttttatttaatwgctat
aacattatttattattgtgacanatcagtgtaacaggcmattntttcctctcnttcaaaaaaaatacatt
aatgtaattaaaaagtattaatccattacttttttccttttntttwaatgttatttattnttnatttttt
actacnggcatgattatatantgaagttcaataaaatgwaantttgctttctnnntatttctntgtatta
ttattactgattattacatgattattactgaaaataattttgtcatatagaggaagggngtgttaaaaaa
tgatccgctctgggtgtcgaatacgctaggtacgccactg
>MER6B   Nonautonomous DNA transposon.
cagtaagtcctcacttaacgtcgtcgataggttcttggaaactgcgactttaagcgaaacgacgtacagc
aggtcctcgaataacgtcgtttcgttcaacgtcgtttcgttataacgttgatgaggaaaaaattggtttc
gttatacatcatttcgcttaaagtcacagtttccaagaacctatcgatgacgttaagtgaggacttactg

>ZAPHOD   hAT-like autonomous DNA transposon (a consensus).
cagtaccgcccttagacccgggcaagaggggcccctgccctgggccccgcgctttagagggccccgcata
tcacaaacacacacaaataaatttattaaagaacacatgggtgcctctgtcactcgggatccggcgctca
gcgctggcacagcacgacccgtaaccctaaacatccgctctcgtgactaacaccgttcaggccccaggga
aatgcttctccacatctcttgccctgtgtcctcgaaacaaaaggcgactgtgtccgaatgccatgaaggt
ttgtgggttgtgccgctgccgacgtcggagacggacactgcttcggagtgcagggaggatttgagcggcg
gaagcgcttaggtaagagaaaagacaaattaattaacttgtcaaatccttcctctcagatagcatgaatg
caatagattcttgcataacgaagtatcatttcccagtagtgccgagcgtccattttcttgcttctcttcg
tgttccaattcgtggttccggaggtactcacaaattagcgcggtattcgcaacagttgcacatggcagct
gaggaacattttgcaatattaaacaattcatattactcttaaatttgtatatatgtaggtctagacgtaa
catgcatgaagcgtgataccgattctttacattggcaactagatggacattgaacgctagaattgcgaat
agttttatttttataaaaatatttaataagatttaattaaattttcaaaaattaaataaaaatttcagct
ttatttaaataattttgatttaaaanttttatatttattaattataatttgtattttgccttttaatttt
aatagataattttgaatattttagaaaaaaaaacatataaagtaaatatttaaattttacatttacttta
atttacatttttgatgaaaatatattcaaattttgtanactttgaatacaattaattttatttttaatcc
tttagatcaccgagaatgagtacaagtcaagatcntgatagaaatanaaaatacnaaagtggagctcaga
aaanaaaaaagctgaaaagaaaaaatagaaaatcttcaaagaggcggtctgcttaaatttttnaaaactg
naaacaatgaaagtaagcagacttctgcngagcatgacccacataaaattcgcaaacaagacattacaaa
ttctttatttaataaagatttaattactgatcaaaacaatgaaaatgagcaagaaaattattctnatcaa
atccacaacttgaacaggtcagatgaaatccctgcaacttcacgttcttcactaaatgaagatttaatta
ctgatcaaaacaatgagaatgagaaaaagaattatttatancaaattcgcaactcaaaagaaacgaatgc
aactccggcctgcccattagaagatgaagaaagttacatttatgaaancggcaaattgaatgacgaaaaa
aaaaacctctagctttattacgctttattagatggcgatcctagaaaatggtnatcacatccttctnaca
gcatgagaatgtttctagcaaaacgcaattcgattcaaattaatgntnatacaattttccactgaatgaa
catggcagaaaatttagtatttnattttataccaaaattntttcnaatggagaaagaatagagacwtttt
tmatattcaagtcagaagtcgaacattttgttactattgttacatatttcactcnatttttacagtcagc
tttgtccaaagaagtaatctgtnactggaaacacttngattttnaattaaaanaatacaaaatgtcattt
acaccgcaaaaaaatacacacgcaaatactagaatggaaaaaaanaggccaaatnancaatagtattcaa
caaataaacgcaaancaaattanaatattgntgtgatgttcttaaagaaaatattangtgtccaatattt
agccaagcataatgatgctttcacgtgncancaacagcncaatgtttatagaaaacagtggaaattttct
aggtttagtagaaatnatttcgaanttgatgcnaaaatggccaaacatgtaatacagattaaaaatgaac
naaatgatcactacntagaatggagaattcaaaatgagattactantttaatnggtantaaagtgagaga
agaaatcatagacaacaatttagtaagtaaatattactcagttcaactagattgtgctagggacaaaaat
catgttgaacanctaacatttattgcatattactgaactatcagaggaagaaaacaaggatatcaaaatc
aattaatatttcattggttttatacctaaaagtacaggttttganttaagtgaagaactgaaaagacaac
tttcaattttaggnattgatttaaaagattgtcgagggcaagcctatgataatggcgctaacatggttgg
taaaggaaaaggtgtacaagccagaattttggccgaaaatccagaagcattctttgtgccatgtacagcn
catagtttgaatttgttactaggagacgtggcctcaactgtgccaanagnagtgatattctttggaacaa
ttcaaagattatatacgatattttctggatctgcccaaagatggaacatcttgatgaaanacatatcaaa
tttgaccttacaaccactctcagacacatgatgggaatgccgactaaatgctgttaaagcaattagattt
aatttagacaagatanaagatgcactagaagagttaagcgaaacaacagaagatcctcaaataaaaagta
aatcgtggtctttggnagaaaatgaaattaattttgaatttgcgctatccacagttatttggtatgaact
gttgnttgctattaataangttagcaaaagcttatccaaacagatccgagtttggctattttatcttttt
aaangattaaaacntatttttttaaattttagagaaaatggtttttcnaaatcaaaagaaactgcatgtg
aaatatgcaacaaaagtgacattccaataaaatataaggaaatcagaacaagaaaatgaaaacatttgca
tgactntgaaggaaagaattcacatacaaataatccccaaactaatttctatagagactattttctggcc
attatagatcaaggtatagtctcgattgaagagagatttgaacaaattgagcaatatattgctattttcg
gttttctttataatatcccagcattgaaaaatttgaaagaagaacttaagaaatactgtatggatctaga
tattgctttaagagatggtgaaaatngcgatataagtgatagtgatttatatgatgaaattaaaatattt
tgtaatattttctgcgataatgataatttatcatatgcgaccccattacaatgtttgaacatgatatgta
aaatttatggttcatttccaaatctaagtattgctttaagaattttattgacaattccagttgctactgc
ctcagcagagnaaagtttctccaaattgaaattaataaaaaactatctaaaaactacaatgactcaagaa
aggttgtctaatttggcattactgtcaatagaacacaaattatgtgaaaatcttgattataacaacataa
ttagtgattttgctgaaatgaaggcaagaaaaataaattttatggaataaatacataataatttatgaat
tatgtatgtctttattttattactcatccaaacattgccggcccatcaacagaacacccagacatgtgca
ataataattaaattcagtcatctttgatattttgccaactttcagtcatataaaaaccatagctttacac
atatttttaattttgtcattatgaaggtatatttgtcaaggtaggaggatagaacatattttatttaaca
gtttgttagcttgatttataacttttaaatatttagacatatggtatgtgggcctccatttgtactcttg
ccccgggccccgcaaatgttaggggtgggcctg
>TIGGER9   Mammalian TIGGER9 repetitive element - a consensus
caggtggtcctcaacttttanacgtttnactttcaaacaacccgcacttttntgcattatacattgatat
ccctaaactgcctttcntatgccgaattcggacttntgcacatcagctgatnaacgaacattttgagntn
tccttatgtggtgctgcctgccagtcagatttcacggcantgccaatgtttctgtctgtacagcgntgtt
tgtgcaattatttgaatattttattgcattttgcccttattattttataaaaatgagtggaaaatagaaa
aatgaaagtgctgatactagtgataagaagcataggtctcataaatwtaatacaattgagacaaagatgg
aaatcattaggcatgctgaaagcggcgaatctttagcctcagtcggacgctcattggacttaagccagtt
gactgcgtgttcaattgtgaaggaaaagaacaaaattaaagaacatgtacaaaatgctggaaatatatca
tcgaagattgtgtctaaaggggaagtncaattaggaattttatactatttttnagctctctgggaanaaa
tccntccctacaacacgtatntcaatcatttnacttttacacactcaatgttcgacatacgttttcagga
atgtattangtangaaancgggggactgg
>HERVL66I   a consensus.
[encoded data, 4331 characters]
ccttccccatgtatctgtaagggtattttcctacaattgagtatcaaattgaggccgaa
>THE1A   Long terminal repeat (THE1A subfamily) - a consensus.
tgatatggtttggctgtgtccccacccaaatctcaacttgaattgtatctcccagaattcccacgtgttg
tgggagggacccagggggaggtaattgaatcatgggggccggtctttcccgtgctattctcgtgatagtg
aataagtctcacgagatctgatgggtttatcaggggtttccgcttttgcttcttcctcattttcctcttg
ccgccgccatgtaagaagtgcctttcgcctcccgccatgattctgaggcctccccagccatgtggaactg
taagtccaattaaacctctttttcttcccagtctcgggtatgtctttatcagcagcgtgaaaacggacta
ataca
>THE1C   Long terminal repeat (THE1C subfamily) - a consensus.
tgatatggtttggctgtgtccccacccaaatctcatcttgaattgtagttcccataatccccacgtgtcg
tgggagggacccggtgggaggtaattgaatcatgggggcggttacccccatgctgttctcgtgatagtga
gtgagttctcacgagatctgatggttttataaggggcttttccccctttgctcggcacttctccttgctg
ccgccatgtgaagaaggacgtgtttgcttccccttccgccatgattgtaagtttcctgaggcctccccag
ccatgctgaactgtgagtcaattaaacctctttcctttataaattacccagtctcgggtatgtctttatt
agcagcgtgagaacggactaataca
>MSTB   Long terminal repeat (MSTB subfamily) - a consensus.
tgatatggtttggatgtttgtcccctccaaatctcatgttgaaatgtgatccccagtgttggaggtgggg
cctggtgggaggtgtttggatcatgggggcggatccctcatgaatggcttggcgccatccccttggtgat
gagtgagttctcgctctgttagttcacgcgagatctggttgtttaaaagagtntggcacctcccccctct
ctctcttgctcccgctctcgccatgtgacgtgcctgctcccccttcgccttctgccatgattgnaagctt
cctgaggcctcaccagaagccgagcagatgccggcgccatgcttcctgtacagcctgcagaaccgtgagc
caattaaacctcttttctttataaattacccagcctcaggtatttctttatagcaacgcaagaacggact
aacaca
>MSTB1   Long terminal repeat (MSTB1 subfamily) - a consensus.
tgctatagtttggatgtttgtcccctccaaacctcatgttgaaatttgatccccagtgttggaggtgggg
cctaatgggaggtgtttgggtcatgggggcggatccctcatgaatagattaatgccctccctcggggtgg
ggatgagtgagttctcactctattagttcccgcgagagctggttgttaaaaagagcctggcacctccctc
ctctctctcttgcttcctctctcgccatgtgatctctgcacacgccggctccccttcaccttccgccatg
agtggaagcagcctgaggccctcaccagaagcagatgctggcgccatgcttcttgtacagcctgcagaac
cgtgagccaaataaacctcttttctttataaattacccagcctcaggtattcctttatagcaacacaaaa
tggactaagaca
>MLT1AR   MLT1- LTR retrotransposon internal sequence - a consensus.
gaaattggtaccgagagtgggggtgctgctgtaacaaatacctaaaaatgtggaagtggctttggaactg
ggtaatgggtagaggctggaagagttttgaggtgcatgctagaaaaagcctacattgccgtgaacggacc
gttaagggcaattctggtgagggctcagaagaagaggagagctgtagagaaagcctcaatcttcttagag
antacctaagtggtcgtgaacagaatattggtagaaatatggacggtaaaggccattctgatgaggtctc
agatggaaatgaggaacatgttattggaaactggaggaaaggcnatccttgttataaagtggcaaagaac
ttggctgaattgtgttcgtgtcctagtgttttgtggaaggcagaacttgngagtgatgaaatnggatatt
tggcngaagaaatntctaagcaaagtgttgagggtgcggcntggcttctcttgactgcttatagtaaaat
gcgagaagagagaaatganttaaagatggaattnntaatcaaaagggaagcagaacttaaagatttggaa
aattctcagcctanccatgttgtaaagaatgagaaagcgtgttcaggagagaacaccaagggtgtggcca
agcaaccgtttgataaggagattagtatggatnaacggaagccnggtgctattcatcaagacaatggaag
aatgaccccgaaggcatttcagagatcntcaaggctgcccctcccatcacaggcccagagtgcaagggcc
tggagggnagaacggtttcaagggcaggnnccantccccactgcccagtgccacctcagtctgctcccta
tcttcggctgcccgtttagntgtggctcaagtgggcccaggtgcagctagggccgcctctcctggaggna
caggttataaaccttggcagcatccgcgtggtgccatctccgcaggcgcgcagagtgcatgagctgtgga
ggcatggctncctccacctagatttcaaagatgcgagacctggggcccaagcagaggnctcgcggggcag
ggccaccacagagagcccccactagggcaatgcccagtggagccgtggggtcnggcctgcaaagagcccc
cactaaggcaatgcctagtggagctatgggggcagggccgcctncgngaccccagaccngtagagccacc
agnntgcaattccagcctgggagagccgcaggcangngactccaacccgtgagagctgccacatgggctg
cgcccagcaaagccatgggggtggngctnccnggngtcttgggggnncaacccccaccccagtgngtctg
gaaggcggaacatcgagtcaaagaagattattctcgagccttaagatttaatgttgtttgccctgttngg
ttttggacttgctcgggacctntcactcctttcttctttcctatttctcccttttggaatgggaatgtct
atcctatgcctgtcccaccattgtattttggaagcacataacttgtttgatttcacaggttcacagctgg
agagcaattttgcctcaggatgaatcacaccttgagtctcacccatatctgatttagatgatatttagat
gagactttggactttagactttngagttgatgctggaacgagttaagactttgggggctattgggatgga
atgagtgtattttgcatgtgagaaggacatgaatttnggggggccaggggtagaa
>MLT1CR   MLT1- LTR retrotransposon internal sequence - a consensus.
gattttggtaccgggaagtggggtgctgctgtaacaaatacctaaaaatgtggaagtggctttggaactg
ggtaatgggtagaggctggaagagttttgaggcacatgatagaaaaagcctagattgccttgaagagact
gttggtagaaatatggacgttaaaggtgattctggtgagggctcagaaggaaatgaggagagctgtagag
aaagcttctatcatcttagagaatacatatatcgtcatgaacagaatgttggtagaaatatgaacgttaa
aggtgcttctggtgaggtctcagacggaaatgaggaacatgttattgaaaactggaggaaaggtgatcct
tgttataaagtggcagagaacttggctgaattgtgttctagtgttttgtggaaagtagaacttgtaagcg
atgaacttggatatttagctgaggagatttccaagcaaagtgttgaaggtgcggcctggtttctccttgc
tgcttatagtaaaatgcgagaggaaagagataaattgaggaaggaactgttaagcaaaaaggaaccagaa
cttgaagatttggaaaattctcagcctatccagattgcaaaagatgagaaagcatgctctggagagaaca
ccaagggtgtggctggacaaccatttgctaaagagattaggtatgtgactcatggatccaatcaaccatc
tcagcagaagccaggaatagagatggggttatccaggaaggatctgtggaggaccctcttgtctaatggc
gtggacccccatgacttgcacgggaggccgacaaggtttttgagaattttataccagcagaaacactgcc
agcctggactgaaggggacagagatgggacaaaatgaaggaaggatgactctgagggcggagccacggat
gcagaggccatgggggctgcggccnccatgggccaagagcatggggtcaccccagcgggcccggaagaca
gagcatcgagccacagaggattattctcgagccttgaaacctaatggaattttccctgctgggtttcgga
cttgcttgggacccgtgacccctttnttccttccnatttctcccttttggaatgggaatgtctatcctat
gcctgtcccaccattgtattttggaagcagataacttgttttctggtttcacaggtccacagatggagag
gaattttgccccaggatgaatcataccctgagtctcacccatacctgatttagatgatatttagatgaga
ttttggacttagagttgatgctggaatgggttaagacttttggggatgttgggatggggtgaatgtattt
tgcatgtgggaaggacgtgaattttgggggagccagagggcagac
>MER104B   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcgttattcctagcggcatgactgggcatgcaacctttcgcgtttcagttaacaaacc
atttaaggaccatttgaggaaggaatatgagtcctggttgttgtctgaaaaccttctgttganaccttct
ggtaagatcaagaaagcgccagcatcaaaacttgcagaatgggtgtcagcggcttggaagaaaatcccgg
agacaatagtggagcattcttttaactcctagaaaccaaatggttgtgggnangggagggagaaggagtg
aatcagacatgtttagcaacattcctnaagcgggagtcaaaagtaggctanctctacataattgcaaagc
cggctcaggagcccagcaccaatggctctcagttnttttatggattcttttaagaaatgctgcatcacca
acgctcttgangcacagaggacgatattgtgtggaaaaacacggacatcgatgactctgagtcgaaaagt
gattcagaagagttggactctgaatgtgaagaagttttaggaataccttaaccaatttatttcgcttata
ttttcctttttatgtatgcacaagagtgatatatgataaaaatctgtgtctaaataagtctaaaagagct
ctttcaataagtataaaataaaaattctaatgataaggaaagcattgtgtcatagtttaattggcagcgt
tttttctttcttagtggtacataaaataatggtgcgtcttacaatcgatggcatcttagattcgatgaaa
tacgg
>MER104C   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcatagctgttcatattgtcatcacttcaattgagttatgtgcattgttggtactaca
cgtgttgagtttaattgccatttaaaatgtcttcaaaaagattacactatgattcagcattgaaatgaaa
agttattgtgtacacagaaaggcacggaaacagagcagcggggcgtaaatttgatattagtgaagcaaat
attcgtcgttggaggaatgaccgcaattccatattttcttgcaaagcaacaaccaagtgctttatgggac
ctaagaaaggaagatacccacaagtagatgaagctgtgttacgttttgttnctgagatacgtgcaaaagg
attgcctatcacacgccaagcaatgcaactgaaggcaggagaaattgccnaatcccncggaatagatgaa
agaaatttcaaagcaanaagaggctggtgtgaccgattcatgcgtcgtgcaggactatcgttaaggcatc
gtgtcatagtttaattggcagcgttttttctttcttagtggtacataaaataatggtgcgtcttacaatc
gatggcatcttagattcgatgaaatacgg
>HSTC2   Non-autonomous Tc2-like DNA transposon - a consensus.
ccgtatttcatcgattctaagatgcacattttttcacattttaacatctctgaaatcgggatgcatctta
caatcgatggcatcttacaatcgctgtcagccaggcggcagtcgtgacgtagttgtcattgcctgcacgt
gtgcgaacttggtcatagctgttcatattgtcatcacttcaattgagttatgtgcattgttggtactaca
cgtgttgagtttaattgccatttaaaatgtcttcaaaaagattacactatgattcagcattgaaatgaaa
agttattgtgtacacagaaaggcacggaaacagagcagcggggcgtaaatttgatattagtgaagcaaat
attcgtcgttggaggaatgaccgcaattccatattttcttgcaaagcaacaaccaagtgctttatgggac
ctaagaaaggaagatacccacaagtagatgaagctgtgttacgttttgttnctgagatacgtgcaaaagg
attgcctatcacacgccaagcaatgcaactgaaggcaggagaaattgccnaatcccncggaatagatgaa
agaaatttcaaagcaanaagaggctggtgtgaccgattcatgcgtcgtgcaggactatcgttaaggcatc
aaacatcaatttgtcagaaacttcctgctgactttgaacagaagctgcttaacttccagcaacacgtgat
tcaattgaggaaaaaacgaaactatgagtttagtcaaataggaaatgctgataaaacctcggtgttcttc
aacatgcctcaaaatnatactgtcaatgctaaaggtgctaaagagatcaagatcatgagcataggttatg
aaaagcancatatcactgtgangctgtgcataattgccaanggccaaaagttgttgccatatttaatttt
aaactacaaaataattccnaagaattcttccccaaagatgttatcgtttatctgcatgcttgcacatana
catgnagacatagacgttagncaaactgaagaagaaatgactcagtaatctggaacggatgtctaagagc
ccacataactcaccaagcgtataggttctcgatcgttttcagatgtgtatctgaacagtaaagaatangt
tcactgaaaagtgaattaggttggtgtgatccatnatgtagactccttcgcaagactccatcagcgaacc
atttgacacttttgaggaaggaatatgagtcctggttgttgtctgaaaaccttctgttganaccttctgg
taagatcaagaaagcgccagcatcaaaacttgcagaatgggtgtcagcggcttggaagaaaatcccggag
acaatagtggagcattcttttaactcctagaaaccaaatggttgtgggnangggagggagaaggagtgaa
tcagacatgtttagcaacattcctnaagcgggagtcaaaagtaggctanctctacataattgcaaagccg
gctcaggagcccagcaccaatggctctcagttnttttatggattcttttaagaaatgctgcatcaccaac
gctcttgangcacagaggacgatattgtgtggaaaaacacggacatcgatgactctgagtcgaaaagtga
ttcagaagagttggactctgaatgtgaagaagttttaggaataccttaaccaatttatttcgcttatatt
ttcctttttatgtatgcacaagagtgatatatgataaaaatctgtgtctaaataagtctaaaagagctct
ttcaataagtataaaataaaaattctaatgataaggaaagcattgtgtcatagtttaattggcagcgttt
tttctttcttagtggtacataaaataatggtgcgtcttacaatcgatggcatcttagattcgatgaaata
cgg
>L2A   L2A (MIR2/LINE2) non-LTR retrotransposon - a consensus.
ccctccgcaagagtaaagagggagccccaaaactcacccctcccnnacccctcagcactcacagcctctc
caccactatctgccttgagaccaccgggactaatctcatcatgccctttatccctgtttatgtcagtcac
cacaagaagcccaagactcccaggtcatccctcaccccccacgcttgaatccccatnaggctctgtacat
ctccttttctgaccccatctcccatccctccccanctcctgaaacccttccactgngccctctggaactc
acggtcmatcatcagcaaaatcccccgtatcctcaacctcttctctgaacgttcccttcaccttcttgct
ctaacngaaacctggctctcccctgaggacactgcttcccctgcagccttctcaagtggtggccgttttc
tctcccacanccctcgtaccactgggcctggaggtggggtaggtgtcctccttgctcctcattgctgctt
ccagaccattctccctccctcctccctaaaacaccccagctttgaatctcatgtcatcagactacatcac
ccgctacccctccttgttgcagtcatctacngacctccgggtcactccccctcattccttgaagatttta
gctcctggctcactgtcactctctccaacactactcctgtcntaattcttggtgatttcaatatccacat
agatgatccttccaataccctggcctctcagttccttgacctcctctcctccaatgatcttgtcctccac
cctacctcagccactcactcccatggtcataccctagaccttgtcattaccaataactgcaacccctcca
taatctcaatttcaagcatcccactctctgaccaccacctcctatctttccagctcactccctctagtac
cctaactccaacaattcttcgaccccaccgggacctccaatccattgatcctaccaccttttcactgtcc
ctcacccccctnatgtcctcacttccctccttacccagcttaaattccatggtcaatcattataatcact
cccttgcatataccctcaactcccttgcccctctctcgcttcgtcntactcgcctggcaaaaccacaacc
ctggttaaatccaactctccgcctactccgcgcctgcacccgtgcagctgaacgtggctggagaaaaaca
cacaaccatgctgactggtctcgctttaaattcatgaccacgaacctcaagtgggcccttaatgctgccc
ggcaatcatactacatttccctagtccattcactctcccactctcctagatnactatttcacaccttctc
ctctctcctcaaacctccaacacctcctcccctatcctcactctcagctgatgaccttgcttcctatttc
actgagaaaatwgaagcaatcagaagagaacttccacanactcccaccaccacatctacccacctacctg
catctgtgcccacatactctgccttccttcctgttactacggatgaactgtccgtgctcctatctaaggc
caacccctccacttgtgcactagatcccatcccctctcgcctactcaaggacatcgctccagcaattctc
ccctctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatacaaacatgctg
ttatttctcccatctttaaaaaacaaaaattctcccttgaccccacttccccctccagctaccgccccat
ttctctgctcccctttacagcaaaactcctcaaaagagttgtctatactcgctgtctccaattcctctcc
tcccattctctcttaaacccactccaatcaggctttcgtccccaccactccaccgaaactgctcttgtca
aggtcaccaatgacctccatgttgctaaatccaatggtcaattctcagtcctcatcttacttgacctatc
agcagcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacacc
acactctcttggttttcctcctacctcactggccgctccttctcagtctcctttgctggttcctcctcat
ctccccgacctctnaacgttggagtgccccagggctcagtccttggacctcttctcttctctatctacac
tcactcccttggtgatctcatccagtctcatggctttaaataccatctatatgctgatgactcccaaatt
tatatctccagcccagacctctcccctgaactccagactcgtatatccaactgcctactcgacatctcca
cttggatgtctaataggcatctcaaacttaacatgtccaaaactgaactcctgatcttccccctcaaacc
tgctcctcccacagtcttccccatctcagttaatggcaactccatccttccagttgctcaggccaaaaac
cttggagtcatccttgactcctctctttctctcacaccccacatccaatccatcagcaaatcctgttggc
tctaccttcaaaatatatccagaatccgaccacttctcaccacctccactgccaccaccctggtccaagc
caccatcatctctcgcctggattactgcaatagcctcctaactggtctccctgcttccacccttgccccc
ctncagtctattctcaacacagcagccagagtgatccttttaaaacataagtcagatcatgtcactcctc
tgctcaaaaccctccagtggcttcccatctcactcagagtaaaagccaaagtccttacagtggcctacaa
ggccctacatgatctggtcccccgttacctctctgacctcatctcctaccactctccccctcgctcactc
cgctccagccacactggcctccttgctgttcctcgaacacgccaggcacgctcctgcctcagggcctttg
cacttgctgttccctctgcctggaacgctcttcccccagatatccacgtggctsgctccytcacctcmtt
caggtctcwgctcaaatgtcacctcctcagagaggccttccctgaccaccctatctaaaatwgcacaccc
tctcccccatcatgcccatctttcttaccccgctttatttttcttcatagcacttatcaccatctgacat
actatatwatttatttgtttgtttgtttattgtctcctccactagaatgtaagctccatgagggcaggga
ctttgtctgttttgttcactgctgtatccccagcgcctagmacagtgcctggcacatagtaggcgctcaa
taaatatttgttgaatgaatgaat
>L2B   3'-end of L2 (LINE2) repeat (subfamily b) - a consensus.
tcccccttgctcactctgctccagccacactggcctccttgctgttcctcaaacacgccaggctctttcc
cgcctctgggcctttgcacatgctgttcyctctgcctggaacgcccttccccwctccttcancctggcca
actcctactcgtccttcaggkctcagctcaratgtcacctcctccaggaagccttccctgacttcccagg
ccgagttaggtgccctcctctgggcccccccggtcctaccctgccactctgggttatmattgtctgtkng
cangtctgtctcccccactggactgtgagctccgcgagggcagggactgtgtctgtcttgttcaccactg
tatccccagcgcctagcacagtgcctggcacatagcaggcgctcagtaaatgtttgttgaatgaatgaa
>MER51D   Putative LTR of retrovirus-like element - a consensus.
tgaggcaggagaaaatagcagagggaattggaagttggataaagggagaatgagtaaaagcangagagca
gaagcaaggtaaagaggcgggtgagcaagaagcaagataagaagcagaagttgagcagccaaaacaaaag
taagatnanaaagaagtgagtaaggagcccacatggctggctagatccagaccaaaccagtaaggggcag
ctcctcagagatgggcatgtacattagagagaaaaagtatccttaaaatgaccccgtatgataatcagct
cattaaagctcatgcatatggactgcatatcatgcatgtacttaaaattatgggatggaggtgacgcgca
agawgtcacaagcacacaggggccatagkattaagtaactaagcaacccacctatcaatcaaaaggcaga
tgctggctagagattaggcagccttgggaagagaagaaaaaaaaaacacataaaaagacccaaagtacac
caaactgacgctgatctcatttcgcagaggtcagcccactctcccctctctgagagtgtaatactgtgct
taataaacttttgctgctttgctatctgtgtgtgtcttgtccaattctttgtttgggacaccaagagcct
ggaactgcacrgcaccakctggtaaca
>MER5C   Non-autonomous DNA transposon - a consensus.
cagtgctactcaaagtgtggtccatggaccagtgctagtctgcaaactgtttgttaccagtccatgataa
gataagtacagaaattgagagtaagcatttagaaacttttatagcaatttgacagagtaattttatgtct
gttgaatctaataataaaaaawgaaaaaatttgggcttgtattttgtatgtcttttttttttaaatttca
tttttctagtaattcatttttattgtattttacaaaagtattagtctgtgayagattggaaattaaaaaa
aaaaaaaaactggtccttcaccacagatagtttgagaagcactg
>HERVK11DI   It is flanked by MER11D LTRs.
[encoded data, 7810 characters]
agtgccaagctatgattgctatggttcatttaaatcagagaaaagggggaga
>LTR69   Long terminal repeat of an endogenous retrovirus - a consensus.
tgtagtatactataagagacatatcgtggctataagattaatgatagccataaggcccactcaaacatct
cgcagggccgacactacgtgtcacttagcagtatgatgcaacctggcctggggatttccaaccctggccc
ggggatttccaggtctctatgacaacgggacctaaaaaccctggttgccctagagacaaggccacctcag
cacagatgcaactttcataaaccttaaaacaaagcttacccttacaagaatagcttaaactccctttatg
aaagaaacacctggtaactgacccggactgaatacaggtataagaaagggggaagaatcccccaaactct
gagaatggtctccggatggagaccctcccggtcagtcggtcatctgacccctgactgtatctggcccatg
ccaccggcctgctcccgctatccgtcttgtaagagcgctgccagaataaactgcttgaacatcagacggt
gtctaagactcatctttgatgcgaatcgaaccgaaggggaaaagtcgcccctggggaagctggttaacta
ggaccacccaagacccccgaacacgaca
>HERV30I   Internal sequence of primate endogenous retrovirus HERV30 - a consensus.
[encoded data, 8375 characters]
>HERV19I   a consensus.
[encoded data, 5609 characters]
agtagccagaaagaacacgccgcccctcgtcctttttataactatagggtctggat
>LTR19C   Primate LTR19C repetitive element - a consensus.
tgttataggagatagaaagaaattatttaggtagacagttagggtgaagcgagtccccggcagaaaactt
tccttctaacaaaaagcagctcaaaaatagctccctttctaacctcatgcagttcaaagaaatcacttct
cttctaacaaagagcagcctgaaagatcaggcngtaaaacacagataagcaactcnggcacagrrrrrrt
ggggagtctcctgggtaatcaccaaacttcacacttatacgatgggccccagtaaaaacagtgggcctta
ataagcacattcctttccctttaggcgcactaagatagggaagctagaagcggactggggggggatgcct
gcagctgcaagaagatgtctgggaacaggcacggaaactctccctcccagataagcaagacaaagcagcg
cggagcagcagactaagagtccgcctgcgtggtcaaggaatggggtgggagctgatagaaaactctgctc
tatacagatggcacacctggtcccaactgaatctttgggccctaggaggataagacaccccctcctcact
agccccctcctcactagcccatttataaaaaccctgacatttttactgcagcncggcaacccgctcggga
cccctctctgtgacagagagctgttctttccttttgcctattaaactcctgctccaanctcactctgtgt
gtgtgtgtccgcgacctcgatctccttggccgtgagaccaagaaccttggtatttaccccagacaacgag
gctgcttca
>HERV46I   HERV46I is an internal sequence of class I endogenous retrovirus HERV46.
[encoded data, 7029 characters]
agccagataatcaacaacgcccctcttccttttatactaaagtagaaggcaagaa
>HERV52I   a consensus.
actggcacagtgagcaggatgtctaggcgatgaccaccaccacctgggggtctttcttctcttgctttgg
cttgctaactggctctgctgcctgntggcnagcatgcactttgagctgctgcctgctggctagcttgcac
tttgagctgtgctgctttgtgctgcatttgctgagtcctaccgagcctctgttatagatttaaccgacct
aagtcagaagtttnaataattgacatttagagacaggagtatgggattggggccctccttaaagtggccc
tgggtcgtgcgtcttggcccggacctatctgtgtgtcttagattgaatcatgtgtctcgattccagcata
agccgtgactgacgctaggctcaggggaangacncttntgccctgtgaccgttggttgttatgtctcaac
caggcattggcccccattctatagagtgctcaggggaaagactgataccctgtgcaatatatgggcccac
cgggtggtcgctcatgtggaggaagagcagtcactatttggaatgttggggtccacactccnaaaagcag
atggctcactaggactctacaaaatgcctttgctgctgctgctactatgtctctgtcatntaaaaagatn
ctgatcctcagggtttagggagaagcactccatggcacacccttataaaacagncccaaatgcttaccct
atccttaaaggccagaggacaccatcgccctatggaaactatgaaggaccacaaagatgggtttaatcga
gtgctgcaacttgcaacatgccaagggattaattcaaatccgactgtaagcccagggtccttaaacccaa
taaagcaaccattgccatgagggaggcccctaaccctgatgatactgatttgaggctctctggaggaaga
aacttataaatatgagtagggtagagaggactccctccccctgaagnatatccagtaactcacccaaaaa
caaaacgaaaactttgacaagaggnnaaggaaacaaaaactatgatttgaccaattggaatccgaattta
ctaaaaaactataaaaaaaaagataaaaagggtnctgattggcttttgtacctctacaacataggttcta
aattaactttaacaatgctgacatgcgccaattggcaaaccttcatggccttaatcaacactggggctca
aattacagttatacctggggatcgctgaaatttaaacaaggtaccccgcatagtccagggnggtgaactc
gaaagacataaaacaaaaggcagacaagnatgcctcaccttaaccactggaactattgcnttgcctaaat
tccccatagtcatagcgcccattgccctaaaatattccatagtgggcatgaatactctgacctaacgagt
aataaacngaaataaaattaagtctttggcacttacaatcggcttaacaaaatgggaccccatggacctt
gctctcncagttaaaatagttaanatggcccaatatanattaaaacaagacctacaggaattaagaccca
ttatacaagacctatttanagaaggggcgatcgtccccactntttctccatttaatagtccaatttggcc
ngtnctcaaacctggnaagaatgaatggcacctaacggtggattaccacaaccttaatgctgcggtncca
ccgattaaggctcccatacctgatatgctactaaaattactgactccatccaatcagcaactggnaaata
ctttgctattgtanatttggctaatatgttctattnagtncctgtttcaacagcctctcagcccagtttg
ccttcaccttcgaagggacacaatatanccttacctgactacccatggggcatcccaacagncctgccat
cgtacacaatcttcgctgtnnaagatcttaaccacatccaactttctccaggaacacaggtatgatatta
natagatgacatcctcctccaaggagattcatttaacacactcataccagacctaaaaatactcacanat
gnagctctcataaaaananatgggccattgattcacacgaagtacagaatttngacagntaagtnaacca
ttcnaactaattattggtcagcccatgacatgctccatgttctatccctaacactgcncaggaagcacaa
tactcaggcantctttaatattgaattaattgaanttgnactgttaggaaatccttgttgctcttagcat
cccgatgaacaagcccaacatcttttaggactctgngggttctgaaggcagcatattcctcatttacaaa
ttttacttaagcccatttatgctgctacttacaaactggcccaccttgaatggggtcccctataacaaaa
ggctctagaatctgttcaaattgcaatccataggcactgttgttagtgccccccagagattccttcactg
tagaggctttagcaacctcctctcatgcctcctggagtctctggaccacctatgatggccataagttgcc
cgtgggtttctgatgcaagaaactgccctcctcagccccatgctacacaccattngagtgacagctgctg
gccgcatactgggctcttctggaaacggaggctctcacggnccctgagcccgtgactctctgcacctagc
tgcccattatgccttgggtcatggaagcngcaccctgaaaactcgncatggctncagaggcctccttact
aaaatgaaaatagtatttacagaatggagtcaaacctgggccccctggcatatccnacctgcaggaggna
atggcctcccctgtcctcagtcccttgccagacgcnatggtgctgaaggaggtcacccctctcccggacc
cnttggctacctggggagccccttgggatcaaccgagtaancagcaaaggganttcatacactttatgga
tggcagtgccaccatngcaagtgatggagcctctagtggagtgttgctgctntccatcccctaaccggga
catccctgatnaaggacgggacccaagggtcagcacaattggccgaacttcangcagtcatcttagcact
aaggatgccctgnccgacaancggccctatctgtacatttttacagactcttgggccattgccaatnatc
tggtcanctggtctgaccaatggcaacaacagttccttatccaaggtccccnctttggggtaaaaaaaat
ctctggaaatttcttgcctcacagatacccaaaatataaatnaangtcacacatatntctgcncacacta
aagccanaatacaaggcctcaccaagacacttcttatccccttcagagttccaganattattgatggtga
ccaaggcattcatttcacttctcaaaatacacancgntggncttttgaagaaggcattcaacggaacttt
cacctcccttactggcctcangctgcaggcctcatagagtaccataacggcttatttaaacaagttcaaa
ttcaattnaataagacatggcacatttcagtcatccatcaaacatcaggggtgaat
>MER89I   Internal sequence of retrovirus-like element MER89I - a consensus.
[encoded data, 6887 characters]
aaaggggggac
>MER110I   Internal sequence of retrovirus-like element MER110I - a consensus.
[encoded data, 4757 characters]
tccttcagntcgggntgaagaatgaccaaaggagaaat
>MER21I   Primate MER21I repetitive element - a consensus.
[encoded data, 4251 characters]
>PABL_AI   Primate PABL_AI repetitive element - a consensus.
[encoded data, 5041 characters]
atatacaagcatgatagaaatcatgcgcaaattgacagtggggat
>PABL_BI   Primate PABL_BI repetitive element - a consensus.
[encoded data, 7171 characters]
ataataaatatacaagcatgacagaaancatgcgcaaattgacagtggggat
>MER52AI   Primate MER52AI repetitive element - a consensus.
[encoded data, 7171 characters]
gtacctcttcagaggggggat
>HERV57I   a consensus.
[encoded data, 5396 characters]
aagagctggggaacggggtggat
>MER70I   a consensus.
[encoded data, 5041 characters]
ggtgggcatatgaaatggactagctttgctaagggggatatctgggttggggg
>HERV38I   a partial consensus sequence.
aatttggtgccccgtgtgaggaactgtgtgtttcgagcggctcagcctgtacgcctggtttccaacgagt
ggagcaattggctgcggcagcgcgccagggcttacccactcatgctaccaggcggggcagcagccgcttg
caaatgccagctgctcgtggctagctgaccccgcggctgggacctcagggaattcccagcagctgccgag
accgcctttgtctcggggattttcccttccctccccttcatggcatcagctgctacaatgctctgttggt
gtaaggaaagcggcatctgggaagtcgacggacttcaaggactgggtaagtcaaccggagtgcacccgga
aatcctctgtctctgccatctgggctctctagccatctggacctagcataggtcatctgtggtgccatct
gggcctctgtgccatctggacctaatgcaggtcactctgtggtgccgtctgggtttgagacaagatctca
ggacttttctccagtctcccctctttcgggatcggtttggagtgctccgtctgcatcggatccgtctgtg
tttgtgtctctgtttagtgttacccctccctccgagggtgctttggcacagtctccatcccacccgccaa
gaccaggtccatctgattgtcagaaggcagcaagataggctgctcctctcctcgctaggggagaaacagt
ttccaacatcctggcctctgattttgtcatcctctttgggactccagagtatttcctgtatctgtgtcaa
gctttgttaggggagaaagcatgtgaactcttttctagactatctgggactccagctggttacatattat
ggcccgtttttgtgcacattttaaactgatgggcaaattacagtaagaaaaattcagagctcaaatggtt
aacctgcaactataaagttaagcagagtcttctaaagctctctattttctcttttcttttctgcctgctt
tgaatctgctgttattaagctactggtgttgagataaaactcactgtttcaacgttacttggagattttg
tttttcttatacaggtcagccagttctggctaaaatggaaacattagaaactcatttgaaactgaagaaa
aaagaaaaaagaggtaaaagaggtttttaaaacaaaactgccatagaaactgctttacccaaattttggt
tcacagctttccttagattacctatcagggcaaacaacgtttagccatgtgaacaggttccaatttcatc
agaaaaataatttggatccagctatcttttataaagtggtgagtttgtattgctatcttatggctagagt
tctgaggtaaaagctattggatctttgtgcatgtatgtatacatgtttagatatgcttatgtgtatgtac
atgtattatgttatatgttgtgtctagcatgctaccaaattggcttataagtaaatgagtactcataaat
taaataagtccaaatgcttttcaaattcacatgaatctttggtaaataaaactgactttaaaattattga
taaaaataaaatgtcttcagaattgtcagcatacatttttgtctgagtttattaaccaaatggttttata
tttgtctatgtctatatgttaagatgtcagggtttgacatcaaggttataggactataaacccagtcaaa
accaaaataatctttgtgtgattttttttgacaaataagactaatttcagattgttggttcaatgaaaac
agctcaatcttctgagttatcggcaaaatatgttta
>L1M2B_5   Primate L1M2B_5 LINE1 repetitive element - a consensus.
tagaggcatctggcactcacctcctccacaaagaaggaccaaaatagcaagtagataatcacattttaaa
tagagcatctaagagagaacactggaattcagcagagaagtgacaggaaacatctgaggcatggaaggag
agggaagyaaagcagccagcccagccaggattggctcagagccaggagaggctccccagtgtggggaaag
ggtaagtgagagatccccagyrgtccacattcccaccacrgactcctgcaatcctagccacrggagagcc
cctcancccttncaggccctgagactagtatagggagctgcctggagtccatgtaatagcattgttccag
agagggagttcacactgggtcccacacaccccctgagacccaagcagctgcagcatggnaccattttgag
agccyagcccccaccagactacatcctgccctggggcccaatagcccctgcatctccacatccctggagc
cccactgacattcccccacatccacccaggagggctgcagtgttacaataccagctggacccagcagtgc
agcagggtccccagcactctagcccacacagtgtcctacaccccagggaataggcagtgcagtacaccag
ggaggctgcccctcnaccccccgccccccgccygacctaggacaaagggagccaaagggagccaaagcat
gcactccccagagcctgagagctgcctgcctggggctgctgccactgacagcaaccctgccccctccagc
agcagggctgctgtacacctgcatgtaccctgaggacaggctctccctacctactgctgctgccagtgca
aagtgtatgctccccagagcctgaggaccacctgcctggggctgctgccactgacagcaaccctgcccca
actctggccccagcagcagctgctgtacacntgcacgggccctgaggacaggctttccctacccactgcc
actacnyctgactctggggccaaagcacatgctccccagagcctgagagctgcctgcctgggctgctgcc
actgacagcaaccctgcccccacccccagcagcagggctgctgtgcacctgcatgcaccctgaggacagn
ctgcccttcccaccactgctgctgccacccngacccaagcactgccatccaggggcctgaggatcggcct
gccccacccaccacagccagtgcccatgtgcaccaccaggggggcctgaggacaggcctacccggcctgc
caccaccaccagtgcctgagcatgccatccaggggcctgaggattgccctgccccacccaccaccactgg
yrcccatgcacaccacccaggggcctgaggacaggcccacccagcctgctgccaccactaccactggcac
ccacctgcacatgccacctgggggcctggggactggcccgcccagcccaccacagccactgctagcacca
atatgtgccacttaggggcctgaggattggcccaccactgctactgccactgcccatgctatgcatacta
cccaggggcccgaggacctgcccacccagctggcctactactgccactgctagcacccaagcaagccacc
tggaggcctaagaactggcccgcctagacccgccaccaccagtgcccatgcatgccacctaggggcctaa
ggacaggcatgcctagcccaccactgccaccactggggcccaaggactggcccacctggtgtccctatcc
ccagcaaagccttnccacagcctccactaacaactacagcctaagccactgaggaamtcacagacaccac
tgatactgattnacagctgaagaaatcatatggagactacactactgcatccacccagaatcaaagccaa
agtaccctacccaaccaacactatagatacatctacaggaaaaaagtctttccctatgaaagccaathca
taaaattggaagaagtaactgttacaccagatghacagatatcaatgtaagganacaanangacacaaga
aacatgaaaaagcaaggaaayatgacayctccaaaggaacacaataattctccagtaacagattccaatg
aaaaaratatgaaatgcctgaaaaagaattcaaaataatgatattaaagaaactyagtgagatacaagag
aacacagataatacaaagaaatcagwaaaaaaacaattcakgatatgaatgagaaattcamcaaagagat
agatatcataaaaaagaaccaaacagaaatcctggaactgaagaattcaatgaatgaaataaaaanacat
atacaattgagagcttcaaaacaatagactagatcaagcagaagaaagaattttagaacttgaagayagg
tctttwgaaataacccagtcagacaaaaaagaaaaagaatttaaaaaataaacaaagcctaygtgacata
tgggacaccataaagtgancaaatatttaaattttgggtrttccagaaaaagaagagatggtcaaaggga
tagaaaacctatttaatgaaatwatagctgaaaamttcccaagtctwrcaagagatttagacatcnagat
ataggaagctcagaratccccaaatagatwcaanncaaaaaggtcttcttcaaggcacattatagtcaaa
ctgycraaagtcaaagacaaagagagaattctaaaancagcaagagaaaagtatcaagtcacwtataagg
raatccycatcagamyaacagtrgatttctcagcagaaaccttacaggccaggagagaatgggatgayat
attcaaagtgctgaaagaaanaaaagytgccaaccaagratactatacccagcaaagttatccttcataa
aaggagaaataaagtatttcycagayaagcaaaagctgagggaattcatcaccactagrccngccctaca
agaaatrcttaagggagtyytacayctggaagcaaaaggacaagtatctaccatcatgaaaacacatgaa
agtataaaactcactggtagadcagacacacaaatgagaaagagaaaggattcaaatgttahcactahag
aaaaccaccaaatcanaatgangaanaataaragagaaagtatanacaaaacaatnatanacaaaacaac
cagaaaacaattaacaaaatgacaggaataagtcctcacatatcaataataatcttnaatgtaaatggat
taanntttccacttaaaagatatagactgnct
>L1M2C_5   Primate L1M2C_5 LINE1 repetitive element - a consensus.
ggagagtgatgtcagcaagatggctgactagagatgcctggtgctcatccccccacaagaaaggaccaag
gcaataataaacagctaagatttgactggagtgtcaaagggagagtgctggagtgcagtggggagtggag
atgcacctgtggtgactggaagttgccacagcatggaggcacccagcctctgcagccccatctcccccac
ctggatcagatctgcctggagcaggagggacttcccattgcagggaaaaggtaagcagaagatccccacc
accccactgccaccacaaacacacagtccttacaacaggagaatcccacagtccttgcaagccctgagcc
cagtttggagagctgccggaattacacagctgcatgccctggattaggagcacaaggtgtgcactcccca
cccccagtgactcaagctgctgcagcacagccatcttgagaccagagccacctctggagtgtaccctcct
ctgggggcagtagccactgcacctctccagcactggggctccatcttcattacaccaagcccacacgggt
ggctgaagccacaaccccagctgtgtagagctgggcccaggattggctgtgactctggtcctgcacgcag
ggaaaccaactcccaccaccgcacttccagccagaggaacagtctgcagtcctacccagggtaaacctgc
ccttgagctagccaaactgctgcatgccctccccaagcaggagaggcccctaagcctctgagcagctgat
acaccccaggcagcagagtggctatgcgcccatgctcaggacctgagaaacagccctgcaggccccatcc
cctacagacatgcccctggcctgcccatgccctcccttaatagggcctgagaaacagccccacaggctac
ccctagcaggcacaccaccgagtgggccttgcacctgtctctcagacctgagagacaagcagctgtgtat
gcccatgtctcaggcctgagaaacaaccctggagctacctggtgggcaaacccccaggccagccaagcag
ccatgtacctgtatcccagcctgagaaacagcccataggccacccctagcagacatactcccaggccagc
taagcagctatgtgaccatgctgagcctgagaaatagccctgtagccactcccagcagacacacctccag
gccagcaagcagccatgagcccatgtcctgggcctgagaaacagccccatgggctacccctggcagacat
gcccccaggccagccgagcagccgtgtgcccaatcccggcctgagaaacagcccatgggccacccctggc
aggcaccacccaggccagccaagcagctgtgtgcccagtcccagctagaacagcctatggactaccccca
gcagacacacatccaggacagctgagaagctatgcctgttccaggcctgagaaacaccttcttggccagc
cctggcagagatgctctcagtccagccaagcagcatgcactatatattggcccatgagtttccccccagc
agactgccccaggccagccaagcagccttgcacccaatcccaggcctgagaaacagcccttaggccaccc
ctggcagacatgcctccaggccagccaagcagctgtggcccgcatcctgggcctgagaaacagccccgca
ggccacacctggcagtcatgcccggctgagcaaccacatccccatgctcctggccagagtaacagcccca
tggccaaccccagtgagccataccccaagttggctgacccaccgtgtgcatgcacacccctgacctgaga
aacagcccagtagcccacccctggcaaagctgcaccactgcaccacaaactctctcagcctaggccactg
agaactgcaaacgtcactagtgtggattacagctgaagaaactacatggagactacacttactgcatcca
cctagaaccaaagccaatacaccccaatgaactgacaccaagacccatttatacaaataagtttttccct
ataaacctactccataaaattggaagaggtacttttccaccagatgatagaaatcaatgtagggacacat
caaacatgaaaaagcaaggaaacatgacacctccaaaggaacacaataattctccagtaacagaccccaa
tcataaatatatgaaatgccagaaaaaataataatcttaaggaaactcagtgagataaagagaatacaga
tagacaattcaatgaaatcaggaaaacatgatttgaatgagaaattcaacaaagagatagatatcataaa
aagaaccaaatagaaatcctaagagctgaagaattcaatgaatgaaataaaaaatacaattgagagcttc
acagactagaccaagcagaagaaagaatttctgaacttgaagacaggtcttttgaaataacaggcagaca
aaaaagaataaaaaagaatgaagaaagcctacaggatttatgggacaccattaagtagatcaaatatttc
attatgggcattccagaaggagaagagtagagaaaaggtgaagaaaacatatttaataaaatagatgaaa
cttcccaagtcttgggagagagatggacatctagatccaggaagctcaaagaaccccaaatagattcaac
ccaaacattatagtcaaattgtcaaaagtcaaagacaaagaaattttaaaacagcaagagaaaagcatca
cacatataagggaatccccattagactaacagcagatttctcagcagaaaccttaggccaggagagaatg
ggatgatatattcaaagtactgaaagaaaaaaaatctgtagccaagaatattatacccagcaaagctatc
cttagaaatgaagaaataaaatctttcacagataagcaaaaactaaggaattcatcaccactagacggcc
ttacaagaaatgctaagggagtcttacatctggaagtaaaaagacaataaccaccatcatgaaaacatgc
aaaactataaaactcactggtaagccaatacacaaaggagaaagagaaaggaatcaaaccttatcactac
agaaaaccacccaactacaaaaataaacaataagaaaggaacaaagaatatacaaaacaaccagaaaaca
ataaaatgacagaagtaagtcctcacctatcaataataaccttgaatgtaaatagattaaattccccata
aagatatagactgctgaatagattaaaaaataagacccaactatatgctgcctacaagaaactcacctca
cctgtaaagacacacatagactgaaagtgaagggatggaaaaagatattccatgcaaatagaaaccaaaa
ggagcaggagtagctatacttatatcagacaaaacagacttcaagtcaaaaactataaaaagagacaaac
aaggcattatataataataaagggatcaattcagcaagagatataattgtaatatgtgtacaattgtaaa
tatatatgcacccaaacactagagcacccagatatataaagcaaatattattagatctaaagggagagat
agaccccaatacaataatagttgaggacttcaaccccactctcagcattggacagatcatctagacagaa
aatcaacaaagaaacatgatttaaactgcaccatagaccaaatggacctaaataacagacatttacagaa
catttcacccaacagctgcagaatacacattcttttcatcagcacatggaacattctccaggattgacca
tatgttaggacacaaaacaagtctcaacaaattttatcaagtatcttatctgaccacaatagaataaaac
tagaaatcaataacaagaggaacattcaaaactatacaaatatatggaaattaaacaacatgctcctgaa
tgacaatgagtgaagaagaaattaagaatgaaatttaaaaattccttgaaacaaatgaaaatagaaacac
aacataccaaaacgggaacagcaaaagcagttattaagaggcaagttt
>HERVFH19I   flanked by LTR19 - a consensus sequence.
[encoded data, 7810 characters]
ataactatagggtctggat
>HERV70_I   Human mosaic endogenous retrovirus - a consensus.
[encoded data, 7597 characters]
cactgctttaaaatgtaaatagccaaaaagatagaaccctattcaaccatttt
>LTR70   A long terminal repeat of a mosaic human endogenous retrovirus.
tgtagcagagtgaaagcctaccttcagcaggcacctggcttcaagttgcaaaactacctcctgtyatgaa
gatgtgaaaagtttattttgtcattgaatataagcaattagcatacacagatggcctctycaattnccag
gtgaatttaggatgaactatgtatgacatggtgctgtaaattcttctacttgtggactaattatggtgac
catctttctgtctttgcartctcttaagcagattgactatgatgcatgtcacattcaagtttaattgtgt
aataaaacaattttctttctgttctattattgtggagtttctctggggctggagaaaatttttcttttaa
ttattttttccaaacactgtctagaattaccagacatgatataaacacataaggtgccaaccagaattta
ctctagaggggactttccctctcaggcttccagtcaactcacaattgtgcwgcaaagtgcatgctgtccc
ctaaatatgcaggcagaattgtgtctctgcctatttggtatctatagtcctctacagtcacttctagaga
ggctagaycagatttctacaaacttcacagggcagcaatcaatcattttacctctttcagtgactcttgt
atcttcagacctgaaactgattcagagaccatggggcccagaaacccaatcagagtaacatgtgtgcatt
gagtagacatgtagacatgagaatctccactttccccttcctcctcttgctaaaatgcccacaaatgtgc
aggtaacacctgctgctactccagccattcaggccctaaatctgcagctccaaattttgaatccaggtct
tgagatttgggaaataaaaaaaaacttttatctgaraaatgcaagtccttttggttatcaaactcagaga
gacattaaaatgaaagyrcagttatgtctttctcccccctttgaactatgtattcatctcttgaaactgt
tcrctattgccacaagtagctataaattaaactaataatgccacactggacactatawcccataccctaa
accwtaacgatrtatatccaatcaataatcaatgttatttctgtaaataaataaaaatttctgacaaaca
actttgtatcagcccactctctgtccctctctttttgtctttacaaatcctcttgtaactgctgctaatc
aaagtgtagattccaggcaacttgaatctttgctcccaggttayaatcctnaagcttgrcccaaataaac
tgtctacttatattcatgttgtgtca
>MER120   A composite repeat.
cttttaggtaagcttagaaaaaacaaaactggaagtaccccagtggcatagagaacagaattctacatag
ggtcctcaccctgccccagacctgttcagattcaccctttttggaggccttatttaggtctgaccctacc
ctggagtcttgcctcacagaactgattagaagagatcagagttttggctggtgaatcctgctgcctttct
agagctggtgctcacaatttcctgaaacccaaaagcagataaatgggaaaaataaagtatgtattttagg
gtcttagtttttaaattttctattaaaaccagtgcttgcagagacattctatttagcaacttgttttcta
ttcctgcagatccagtagttgctccacaagtcacaaaaaagtaaatataaacagaataaaattttctcta
aactacattaaactcttcctttctrtatctctttcatctgtctatatttagcttttattctatacaattt
tttaaaaaatttratgacagagaaaaaaaacagaagaagaaataaaaatgctgggccctttatctaaatc
ctgggaattattaaacacttagtaccagctcccagggtgttatgagaattaaatcacataatgtgttatt
cccagcacagtgctctgtawcatactcttgagcacatagtacctgcttaataaacattgcattagtacat
gtgtacatgttgtttttyaaatgcagacttattcagacattgctgccttctgtttcctctgtaaacttta
aagagccagcaaagaatatraaactttaggatggagatkggttgtcyttatttgtaccagaagtatttgg
ttgtgacaagagtgctgagtgtaagggactctgtgctgtgcctgctttctctaactaatgctaataatga
gccnagggggagcaacatcagcattgacaggggacttgtttaaaacacccattcatggacccttttcaaa
cctgcagaatcacattacataragtggggccaaaaattaccaagtgatttataagctcattaaagcttga
gaggcaatgcttagctaagtggttatcagcccaggcttctcattaggatcacatggccaatttgcagaaa
tctctttacttgtgccctccccacagcttctgtttattgttctgggtggaagcatccatgttgttttaat
gaagngcctcatgtgactctaaggtgaggccagaatcaagtatgagggcttcaaaatacattcatgagag
ttaagttccacctttgcactaaagggtggtcacagggcctgttctgtttgggtttggtagggacaggtca
gtgtggcacatatttccattactgtagcagaaattgctggtgtctgtggcaggggagggcacctgaggac
aggaaaggagaaacttatatttttatcttcatggagcagctcattgttcctgaatctcttctgttttaaa
ggacagaaatgggtggactttttctgtcttttctgccagttgatgtsatgctagcaggtaaacatgtggt
rctgacacctttaaaggcatattctcaagatgcaggtgtaatttgtccagagaatctcatctgagaagga
attccagagaaggaggagaaagaaaaaaaaaaaatggcttttcttcaggtaaacatgtctcagatgaaga
gctgtgtccactctgcctcctggaatgccatgcgtttagtacttacaaacctttacttctctacttgtgt
ttttcctccctaatgagtttggtttaactacttcttaaaattcttatgatagtcaagggtctctgaaaaa
tatttctttcctatatcccagagccttctctacattctctacatcatagcttcttatatgccatgcagaa
ttctcagcaagaatttatgatctgcaatattaaaaatgttccctttgtggctgttgaacatggaaagatg
tggatactcaagatttctattggggaaaactgtggtccttagtaaagatggagaacatgtaatgttgagg
ctccatctgtgtgttccattagctctatgcagaacaggattaagaaaatgcttatttaaaygggatggca
tttattacccagaaagttctgaaaaaaattattaggagatacctgctctctagggtgctaaatraagmct
acttaaaattactactaaaaattacagaacataggagttatctgtattttgaastttgcataaaa
>REP522   Human DNA repetitive subtelomeric-like sequence (a consensus).
ggcgtcactgcctgtcttgggtggctggttgggtgtgctatctggggctgtactgcctgcagcngggggg
gtgggttgggggccctatccggggctgcactgcccttggcggggagccggttgggggcactatcccagac
tgtattgctggcagcagtgaggtgggttaagggtgctatccggggctgcactgcccggctgtgggggggg
tggcggtttcgggttgagggcgctatggggtgctgcaatgcccatggtgcggggaggcggggcagtttgg
gtgtgttgggtgtgctattg
>LTR71A   Long terminal repeat of the HERVP71A endogenous retrovirus.
tgtgagaaaacattttaaatggtccattttcaaggcatgataaatctaagtactggcagccagcctgcga
atgtgacaaactgcatgdctcatgcacctagaaggtcacvataagtgaacagaatgtagaggaggggtca
gcccataaaagggaagaaagttttgttattgggaaattgaaacttaagcagggaaggggaccagggtata
accttataagggggataatgaaacttaggcgatrtyyaggaagattgtaaccccatagtactcraccaat
gaggaactgggggarggacttgyatgctaggagataaattacctgctgtaactgccccgggtgtgcctgc
ctaccagacacctgatcttgcaagaccaccattaaaagtctcgcttccactgttcttcgtgtctctgagt
ccattctttgggtttggatgggtgaatgtgtgtttctcaca
>LTR71B   consensus sequence.
tgaaggaaataatgtatacagtggtccatttccaagacaaagtgccttgaatcggcttaggtcagcaaac
tacagaagaaacaggatatactaggcccctgcttggatagccgatgcctgcttgtcggcctcccccttcc
cccttcctccccccccccttagttgccctcacccaaaccaaagaagtttagtctaagatgaaagtttact
agcctgcaaaatagctcgctttgtctgttcttatcagcctgcccagctacttaggtcataagtcaaatac
ttgaagagcccctgagctaactaggattgcaatgcattgtgggctgcaacaaaatgcagcaagacaaccc
taaagaaaacacctaaagcccctacccaacaaccaataggcgacgtccgggaagattgtgaccccatagt
actcagcctatgaggaaccgggggagggacctgcgcactaggggataaattgcttgttgaaactgtgctg
ggtgtgcctgcccatcagacacccgatcttgcaagaccgtcattaaaagtctcactttcgctgttctccg
ggtctctgagtccattctttgggtttggacgggtgagtttgtttctcaca
>LTR12B   LTR from human ERV9 endogenous retroviral sequence (HRES-1/1).
tgagaggtgaagccagctggacttcctgggtcgagtggggacttggagaacttttctgtctagctagagg
attgtaaaaaaatgcaccaatcagcactctgtatctagctaaaggattgtaaatgcaccaatcagcactc
tgtaaaaatggaccaatcagcactctgtaaaatggaccaatcagcaggacgtgggcggggacaaataagg
gaataaaagctggccaccccagccagcagcggcaacccgctcgggtccccttccacgctgtggaagcttt
gttctttcgctcttcacaataaatcttgctgctgctcactctttgggtccgyrccacctttaagagctgt
aacactcaccgcgaaggtctgcggcttcattcttgaagtcagcgagaccacgaacccaccggaaggaaca
aacaactccggacacrccacctttaagagctgtaacactcactgcgaaggtctgcggcttcactcctgaa
gtcagcgagaccacgaacccaccagaaggaagaaactccggacacatctgaacatctgaaggaacaaact
ccggacacaccatctttaagaactgtaacactcaccgcgagggtcygcggcttcattcttgaagtcagcg
agaccaagaacccaccggaaggaaccaattccggaca
>MER121   Interspersed repetitive element - a consensus
gcgttyggtaaaaatctcaaayyatttttcarrmrttggggtttggcaaaacccaaaatrcattttgcca
agcacttttttccccccttaatttttaaacccatgtgtatttcaagggaaatttaatccatatgtttctg
attcatttacacttaactcatcaaaatgttgttttgtaagagttatttgatgtccaagaagccttatgag
tctttttaatgactttttaaagccttttttcttttccttaaaaacaggaagtcatttttt
>MER122   Human interspersed repetitive element - a consensus.
ccctcctaccactctggccgagctgcagtctccgtcgccaccaccaaccacagcgaggcgagccacggtg
gcacaggctccagcctccagctcccccttctcctggtcctctaagccgggcacagagcagctcggcagga
gatacagaagagcctraaatggcctgasgcctcctcagcatgctttatatatgaggttatgcaaatgcgg
ttcctggactacatgttctgattggatgagagaaaacctctaggcctactctgattggactttattttca
tgctctgattggttgtcctaagacttgctctcatccaatcagaacatgataataaagtccaatcagagta
agcctggaggttttttctcatccaatcctagaacatgtagtccaggaaccgcatatgcataacctcagta
tataawtggtgctgaagaagagtcaggctattccaggttcttctgtgtctgctcacngagctgctccgag
cccggcttagaggaccaggacagactggaggctgtagcctgcagcaccgtggcttggcctccctgcagtt
ggtggcgacagagactgtagtgtggctggagtggtaggaaggg
>LTR7A   LTR from human endogenous retrovirus RTVL-H2.
tgtcaggcctctgagcccaagctaagccatcacatcccctgtgactagcacatatacgctcagatggcct
gaagtaactgaagaatcacaaagaagtgaaaatgccctgccccaccttaactgatgacattccaccacaa
aagaagtgaaaatggccggtccttgccttaagtgatgacattaccttgtaagagtccttttcctggctca
tcctagctcaaaaatctcccctactgagcaccctgcgacccccactcctacccgccaaagaacaaccccc
ctttgactgtaattgtcctttacctacccaaatcctataaaacagccccacccctatctccctttgctga
ctctcttttcggactcagcccgcctgcacccaggtgattaaaagctttattgctcacacaaagcctgttt
ggtggtctcttcacacggacgcgcatgaaa
>LTR7B   LTR from human endogenous retrovirus RTVL-H2-like.
tgtcaggcctctgagcccaagctaagccatcatatcccctgtgacctgcacgtatacatccagatggcct
gaagcaactgaagatccacaaaagaagtgaaaatagccttaactgatgacattccaccattgtgatttgt
tcctgccccaccctaactgatcaatgtactttgtaatctcccccacccttaagaaggtactttgtaatct
cccccacccttaagaaggttctttgtaattctccccacccttgagaatgtactttgtgagatccaccccc
tgcccgcaaaacattgctcctaactccaccgcctatcccaaaacctataagaactaatgataatcccacc
accctttgctgactcctttttcggactcagcccgcctgcacccaggtgaaataaacagccttgttgctca
cacaaagcctgtttggtggtctcttcacacggacgcgcgtgaca
>MER51E   Putative LTR of retrovirus-like element - a consensus.
tgaggcaggagaatagggaattagggtaaccaagggttaaggcataagcaaaagaacagcaggtgcagcc
agttctaggcaagattaggcagcayacaggccacatcctcactcctgtgataacaagacagaagtttcca
cttcagcctctgattgacngtgggccaagtctccacttcagcctctgattggtcrcaggccaatccttca
tagggtgtaaccaattggaggcctctaaagggcacctaggggtgttacccaaattcttttagcttaataa
aaaccctaaagaacattgcaatcgcggggctcttgagccgcttgctcgagccygctcccactctgtggag
tgtactttcgcttcaataaatctgtgctttcgttactncgttcttttgttgctttgtctttcgttgcttc
gttcttttgttgctttgtgcattttgttcaattctttgttcaacacgccaagaacctggaca
>MER41F   internal sequence belongs to the MER4I group; subfamily MER41F.
tgagacaggaataatacagggtggtcgcaggagaatagaaaattccaggcagcagtttcacatgactagc
aaaaggaaactgttgaaatagctgcataagctaggggctgataagaccctgaaaaaccagggtgtggrcc
aagctggctaagactgactggacccaacatggyrctggatttgacctaggtttcacctaggacctcatta
tatgctcattaacatactaaatcacacacccaccagcrccatgacagttctgggaacacccatatttggt
gtaaaaatgggtggcaccacagttccgagaaatcttcacctttttccaggaatcttcatgaatattccac
cccttggttaaagaaacccataaaggtagaagcccca
>LTR2C   related to HARLEQUIN - a consensus.
tgctgccctcctcccaccaccttgcctagttcacaagacaggaggaaagagagaaagcaaaaagttagaa
araaacaaaagtaagataaatagccagacaaccttggcaccaccaccyggccctaggagttaaaaaaaag
taataataataacatcaacccctgacctaaactacttgtgttatctgtaaattccagacattgtatgaaa
aagcattgcaaaactttctgttctgttagctgatgcatgtagcccccagtcacgttccccaygcttgctc
gatttatcacgaccttttcacgtggaccccttaaagttgtaagcctttaaaaaggccaagaatttctttt
tcagggagctcggctcttaagacgcaagtctgctgatgctcccrgccgaataaacctcttccttctttaa
tccggtgtctgaggagttttgtctgyggctcgtcctgctaca
>LTR38C   Long terminal repeat - a consensus.
tgtaaccaagcagcttagcttcaaaccacattttaaaactttttttttttttcccttcctttctccccag
tctcaagatataactttgagacaaactgcatatgtgtttcctttcatcttgaaatacagcctcggaatgt
gctgtgaacctccactccctttcttttcccattctatgctcccatgccttatgcacatttatttacctag
atgcttgttaagcacacaccatgctcacttatctggtcatatatttccttagaagcttcaggggccggat
cctgatacggaccagacacctccagaattctctctccagcaaaagattacttcaaggccggaactcactc
ctggctagagattaactgcaagattgactgcaattaatttgtaacctggttgggyccatgatggtgccgg
ccccttcaccagatggaacaataattcaagataagccattggagcgagtcacgccacctggcacctccta
gccccccttgcctcttctgcattccaaacccctctctctttaaaaacccctgccttccctccacaaattg
gagagtggcaatttttggaaagnatttccasccactcttccccttgctagcatggataataaaattcact
ctctttttatcacacctcactcttgttattttggcttctttctacaagcggcaagcagcyggaccctttt
tgctggttaca
>LTR72   Long terminal repeat of HERVI-like retrovirus.
tgatgtaagcagacagggagggtctccagggaytataggaatttaatcaacttgagcaatcagcctgttt
tacagcctcctgccttgcagcctgttttttcccaaaccctgtgtggaatgcagtcacctagttggttgga
accagctcctgacagaccccagcaacttatagatgaacccaagtgaactttcctcattaccatgctaaag
tctccaccccngggaggagctatagcttcattaccataacatgcracctatgtgctggcataatgactca
ctgcatctgcgccactgggacccctcctctacatgcgatgatgcaccctctcccctctccatcaccccat
aaaaccctcctgtcactttccctcggggagacactgctttggagaatactcccagtgttctccttacttg
tgccaagtaataaaactcctattgatcaaaacctgtattctcatggagagtcgtttgttactcaccaggy
gaatraaccctggttttttttgggtaaca
>MER65D   internal sequence MER65I belongs to the MER4I-group; subfamily MER65D.
tgtgaaagttgcagataccaggatgaaatcactttttgtcagacccaaacaaattagagctgggaaagca
tgaaggaggagagctcatgcttgcatgtctgagataaagactgtctcaaggactttctaaaataacccca
caagaaaaantattctttctttaggactgcagcaattagatgmtkcagataagatgctctyraaagaaca
cttgcccagtaatggcatctccaccaatgaactgatgccaactctggctttgagcctctggaaccaatga
actctgtttccaagcagcttatgtgaacttctccttttgccaataaaagcttccctttaccctcccctct
tcagatgcatctgtggcttgccatagctgtgcatcncaggttataatcctctttgcttactcccaaataa
attcatcatattaggagatatttttctctgatgtntttttttttaggttgaca
>ALR1   Human alpha repetitive DNA subfamily 1 - a consensus.
tcattctcagaaactrctttgtgatgtgtgcrttcaactcacagagtttaacctttcttttgatagagca
gtttggaaacactctgtttgtaaagtctgcaagtggatatttggacctctttgaggccttcgttggaaac
gggatttcttcatataatgctagacagaaga
>LTR1C   LTR from human endogenous retrovirus-like sequence - a consensus.
tgccacacccctatcctgtgcccataaaaagacttcagctggcagagcaacacaagcagctgagcatcgg
ggatacaagcggctgagcggtgagcagagaagcagcaactgagcntcagagactacggatagacgyrgct
aacttcagacagtgcggcttcagagaggggcccagccggagatggcynygggcttcagggaaagatcacc
ttcccacaccatcccctttccagctccccatycyrctgagagccacttccaycgctcaataaaatcctcc
gcattcaccaccyttcaancagttcatgtgacctgattcttcctggacgcyggacaagaacccaggtgcc
aagagggcaggggctgycaccctgaccctccactgagctggttngcacttrgccatccctggacggcaga
gctgaaagagcattggttgtaacacgcttggacgctgctgcggggcccgcacagagcctgctcccaccag
agaggagtgaccggccggttccagcattcattcgctccggttcccgcactcactcgcttgcatgctccct
cccgcgaggagtggccagnggcgggctgagtgaaacgagccactccagttcctgccccacgaagggggtc
aaggtcaagggaactatcccatctca
>LTR45C   Putative LTR from retroposon related to the MER4I-group.
tgttaccaagcaaaaggggcttrctgcctgatgygctagaagccaatactatgacactgggtttttgaga
aaagaaaagctttttattgcaagtcgactaacaaggagacaggagtccagctcaaatctgtctccctgtg
ctggctttaaggcagtaattttattagaaaaggtttagggggtggattctgggattagyaggtgattggt
ggaaggaaaggggaggtctggaaagtccttgggcatgcrcagttatctcttcatgctacctcatgggtcg
catgtgcaaattcagggggagttagtatgaaacatgcggtggaaattcaggctgtgacgtcagcaagctc
gttctgygcagactccagttggccatattggttccaaccgatttcagccagttttkttatctcacaagca
gagggagtttcagcatttcagcaagttgtttcttttcttatctgccatcctgcaaactcaagaatttctg
ttagtcattggtttctttaatttaaaaaactctttggggcacagtttca
>LTR76   Long Terminal Repeat from human endogenous retrovirus - a consensus
tgaggcrggaaattaaagaaagaaagaaaaataaaattaaaaagaaagagaaataagctttcctgtatta
ggctgacttgtcccagaggcagcaacaggcacagcccagacccaggaaaagtcttgataatattatctaa
tgtgctctggagactctcccagcactccctcaacatagggagaagaaaaaacaaattttcctttgtttta
tggtatgagtttatagattcctgttctctgtaactagtaacttcaagtattctgttttatctaagcagta
cagtgaaggtcatgagaagcctgagcaggcctgaactacagccacctgggcaccatagtgaaggttatgr
gataagcccgtgcaaaaggctctagagcaaacctagataacagacatctgggttgcatagcaatggtcat
gtgtaatcctgagttatgaacctgtcacaatttgattaactgtctttgttctgcctctgtatccctgctt
tcatgccactgtaagcttgcttcaagctagcccacccccttttgtgaagtgtgtataaaagtcaagtgct
gtctttgttctgggcccagtctttggatgttaagtctgctgggtctgagtgcactcaataaaagatcctc
ctgtttcaccccgaggtctctctcgtcctcctgattccygcaaca
>MER72B   MER4I-group.
tgagaaataaaaataaaatcctaagccccccaactgactgaatagaccccctcttgggccaaggggaccc
cagagaaaccttaaaaactgagttktccyggccatgatgggatgggaggtcagacatgcctcagtatgcc
ccttccttattaacctttaaccagaattctttcctaaggagtaagcagaaaccagctctggaaaacaaga
aatggatgactcattcctttatcgcctttagccaatcatctgaggccacgaccagactccccctccctct
ttgcagtttcgacatgacagctcaccagtttcacaatgcatcccttcctaaaaactgaccaccatctctg
gactggttttggcygacttanrgaggatgcacagtgagggttttcrtgtccycctctgcttcaccttttg
acatcagagggccaaaaactccaccctyagatcatgctaataccnccattttttgaacatgtgacccatg
aagaggcatgaagctcaattgcacatgtgcatgtttctcctttcataaatattcatgactcctcctatag
cttattaaatatgtatatttagccamcccattcagcataaattcctgttccttttacccctccctcaaag
tgctttgctctcagcttctgccagaggctatgcttcccagcctgtgggatggccagcctgcaggctgcaa
ccctttatgagaaataaagctctcctttccaaatttataaacctcatgattcttcagttgacatacca
>ALR2   Human alpha repetitive DNA subfamily 2 - a consensus.
agctttctgagaaactgctttgtgatgtgtgcattcatctcacagagttaaacctttcttttgattcagc
agtttggaaacactgtttttgtagaatctgtgaagggatatttgggagctcattgaggcctatggtgaaa
aagaaaatatcttcagataaaaactagaaggaagctatc
>LTR1D   LTR from human endogenous retrovirus-like sequence - a consensus.
tgatagggacaggaggcagagaaattctaggcagaaaagggyaggtccccaggtaaaaccccaccctcaa
gcygaaaagcctgaaaccacagcccaaagtgagaacttatatccctgttttcctgcttgaatgttgcctt
ttcctaaaccacccatggccctgccccaccccatcccccatcctgtgcctataaaaaccccagactcagc
cagcagagaggagaagcagctggacatcagagactatggctggacgtcagagagaagtggcttgacttca
gagggacagcttgatggcataacttcagagaagaatccggccagagatggccagacttcaggggaagatt
accttcccaccccatccccttttcagctccccttcccactgagagccactttcatcggcaataaaatccc
ctgcatttaccatccttcaatttgttcatgtgacctcatttntcctggatgcyrgacaagagctcaggag
ccatgagtgtggatacaaaaggctgtcacactggccctttgcccttgctggcagagggcagctgcctcac
gtgaaaaggcagagggcccactgagctgttaacacttaagccrtccayagatggcagagctaaaagagca
ctgtaacactccctctggggcttcaggggtcacaggcaccccccccctagatgctgccgcggggcctgca
tggagtttgctcctgccggtgcccaaaagcactcaccctggctcctgcacccactcacctgtgcgctccc
tcccatgaggggtggagcacagcgggtctgagtgagtggagtttgcccctgctggcactgaagcggccag
ctagttccagcactcatgcactccagttcccacctcgttcactcacatgctccctcctgcaaggagttga
gagctgygggctgagtaaacgaggcacccctgtcgcgagtcccgcgaaggggtcagggaaatatcctgct
tca
>MER34C   Long terminal repeat of retrovirus-like element - a consensus.
tgtaggagaccagaatatgccaccccaaaatatgcctctttggcataaggattattttgagctgattatt
ttgagaaactgcagacacaggagaagctctgaaaacagagtagaagttacccttttgtaagggaaattta
catctataaaggaaatctccatttgtaagggtgtctccctctctgtaccaggaagagaaggatgactcta
aatcactagagactcttatcaatggagaaggcaccaacttaaatctgcataacaaaccttacccttgttt
accatgcttttcctggtcacctccccataactggccttccccacacccttctttctttgtttcagcggaa
gatggtnatttaagcctgaattctaagccacctctttgagatttactcatttctctgggtatctcccatg
tatacatgaggtatacatgttattaaacttctgtttgtttttctcttgttaatctgtcttttgttacagg
ggtctgtcccagctaagaactatgaagggtagagagaaaattatttttttcctcccctac
>MER50B   Primate MER50B repetitive element - a consensus.
tgttacaggtagttaggcatgagcggggcaggagagggctctccccccacccactagaaatgtcrggtga
tggttcggcaattatcrcattgcctctctaaaartgataaattggcagccagygccagggagaggccatt
tcctgatggtccacacctgttaacatyaaaatgttaattgaatgcagaccccagggagaagcaacttcct
gggcatgcacattaagagacaaaaatggcgaagtatgatcttccgggtacactctccaccrgaaaaggga
agaaagcctcagatgggcatgcgtataactccctaaacacactgcgcgtgctcaattcccaagggtaagg
agggcactgcgcatgcaggaagcccaccctaagggaagaatcatgggaaagaggcgagcctataaaagtc
ctaggatcaaggttaaacagggcactttttcttctctctttgaccttcaggtgcccacttgggtctcttc
caagcgmactttcctttctttcctgttctaaagcctttttaaataaacttccactcctgctctgaaactt
gcctcagtctctttttctgctttatgcccctcagtcraattctttcttctgaggaggcaagractgaagt
tgctgcagacccgtayggatatgccgcyggtaactcagggtaactcggatctcttccaccggtaaca
>HERVP71A_I   by LTR71A - a consensus sequence.
[encoded data, 7668 characters]
aaggaagtaaatagaaaagaggagggaatt
>LTR27B   Long terminal repeat of endogenous retrovirus - a consensus.
tgatagcgacaggaggcagccaaatgcctaggcagataggggygggtccctggtgaaaccccaccttcaa
gccaaaaaacagcctgaaggctgaaagaccagactgctggtccyggatgaaacccacgacccagagtgag
aacttctgttcctgtttgcccaccctttcccgattgattctttctgaataatgccttttaaccaatygaa
tgttgccttttccaatactacctatngcctgcccctcccccattctgagcccataaaagccccagactca
gccacaytggggggactttcctaccttcaggtagggggaccacccctgcatcccctctccgctgaragct
gttttcgtcactcaataaaattctcctccgccttgctcactcttcaattgtcagcatatcctcattcttc
ttgggtgygggacaagaactcaggacccagtgcacaagccagacttggcccaagcaggccaagtgggtgg
gccatctcctgcagcaggtagcatggccaagcgaggcctgggtggggcatcaccagccagaggtccctgg
cttgcaaagtgaccgagaaaaaaatcctgtgtca
>LTR12C   (HRES-1/1) - a consensus.
tgagaggtgacagcgtgctggcagccctcacagccctcgctcgctctcggcgcctcctctgcctgggckc
ccactctggccgcrcttgaggagcccttcagcccgccgctgcactgtgggagcccctttctgggctggcc
aaggccggagccggctccctcagcttgcagggaggtgtggagggagaggcgcgggcgggaaccggggctg
cgcgcggcgcttgcgggccagckcgagttccgggtgggcgtgggctyggcgggccccgcactcggagcgg
ccggccggcccgccggccccgggcagtgaggggcttagcacctgggccagcagctgcggagggtgtrctg
ggtcccccagcagtgccrgcccaccggngctgtgctcgatttctcgccgggccttagctgcctccccgcg
gggcagggctcgggacctgcagcccgccatgcctgagcctcccccccccctccgtgggctcctgtgcggc
ccgagcctccccgacgagcgccgccccctgctccacggcgcccagtcccatcgaccacccaagggctgag
gagtgcgggcgcacggcgcgggactggcaggcagctccacctgcggccccggtgcgggatccactgggtg
aagccagctgggctcctgagtctggtggggacttggagaacctttatgtctagctaagggattgtaaata
caccaatcagcactctgtatctagctcaaggtttgtaaacacaccaatcagcaccctgtgtctagctcag
ggtttgtgaatgcaccaatcgacactctgttatctagctactctggtggggacttggagaacctttatgt
ctagctaagggattgtaaatacaccaatcagcactctgtatctagctcaaggtttgtaaacacaccaatc
agcacyctgtgtctagctcagggtttgtaaatgcaccaatcgacactctgtatctagctaatctagtggg
gacgtggagaacttttgtgtctagctcagggattgtaaacgcaccaatcagcaccctgtcaaaacggacc
aatcagctctctgtaaaacagaccaatcggctctctgtaaaatggaccaatcagcaggatgtgggtgggg
ccagataagagaataaaagcaggctgcccgagccagcagtggcaacccgctcgggtccccttccacactg
tggaagctttgttctttygctctttgcaataaatcttgctgctgctcactctttgggtccacactgcctt
tatgagctgtaacactcaccgcgaaggtctgcagcttcactcctgaagccagcgagaccacgaacccacc
gggaggaacgaacaactccagacgcgccgccttaagagctgtaacactcaccgcgaaggtctgcagcttc
actcctgagccagcgagaccacgaacccaccagaaggaagaaactccgaacacatccgaacatcagaagg
aacaaactccggacacgccrcctttaagaactgtaacactcaccgcgagggtccgcggcttcattcttga
agtcagtgagaccaagaacccaccaattccggacaca
>LTR43B   Putative long terminal repeat from endogenous retrovirus - a consensus.
tgaggtaggttagatagggtggtcatagcctcccttgaaggggaacaaacttgccaaatagatggagaga
acaaaccacccgacagtgcacaaactgcatcctgggcttgtggttagaacatcctgcagcaaggaggtag
aagagcagaagggaaaatccccaaattcgtacaagtgcagaaacccatgattagtgtccttgggctgacc
tatgctcattataatagtaaaaaacacacccctgggtggagatttaagatgctaatgagacatgtgatgt
atgtactagcatgtacagcmacagcacatgcacatccaggagaccacccacaacatgcttaacagcaacg
ccccttcccaccccttcatgaataatcatgtaagactcccataaagggagtttccccagtgtcagtcggt
gctgtctcacyyttgagcagccnygctctgactcagctgtcagagtgtactttcgctttgcaataaactc
ctttgcttacttttactttggactcgctctcaaattcttttgtgtggygaagtcaagaacctgaaccagc
ccactggcaaca
>LTR72B   Long terminal repeat of HERVI-like retrovirus - a consensus.
tggttttgtaacccagggtccctgggttttggggtayrcactgtgaaaaagtacccacttgtaactgttg
caccttgagttcttgttgtttcaaaaagttccaggaagaagctcagccccagaaaaacaaaaaccagttg
gatccagagatgcctgagttggagatgaactttggcgaactctcctcattaccatactaaaaaccccacc
cagggaggagcttatttgccattttctatacatgtgacatatgtagaagcatgatcagcaactgygcctg
tgctgcctttactccacctctacatacaatgactcagctaaccagcctaataaaagccctgttttcacct
ttgttcggggaggcactgctttggggaactatccccagtgtcctccttacttgttgcaagtaataaaatc
cccttgttaaatcctccttggttgtggtcattggactgtcacctgccaagcratcaaacccacccattgt
gtgggtaaca
>LTR77   Long terminal repeat of retrovirus-like element - a consensus.
tgagagaggaggcagttagaggctggctaggcagatagagagggagggtcttgggagaaaaacaatgttc
acaggaacacccatgggacngcacctgcactgcctctgcagctagcaggaagaaatgtggttaagaactt
cctcttatgccaggatgtttgctcagaagggactgtcccaacttaggygcaggtgcaataaatcaaccta
aatgtccttaacttgacccagctcattatatcattaacatgacattagcattgtggttttagcccccatg
ggttttgcttaggcactcatgggtaataaccaagatggagtcactatggccaacccyaggcatgcgcaga
tgcaacacccctaggagggaactttacccctcccatttaggcaraacccacagaagacttccttgttttt
gccacataaaagatayacccagaactcagccccatttctggcaacctgctttcaggtcccctctctttgc
tgagagctttnctgttgcttaataaattctactctgccttactcactctctggtgtccacgtgccttatt
cttcttggttgtgggacaagaactcagaccttgctaaactaaggagtaagaagactgcaaca
>L1PREC1   L1PREC1 is a subfamily of L1 - a consensus sequence.
[encoded data, 6532 characters]
ttaaagtaaaatttaaaaaa
>MER2B   Nonautonomous DNA transposon - a consensus.
cagtcatcccttggtatctatrggggattggttccaggaccccctcggataccaaaatctghggatgctc
aagtccctgatataaaatggcatartatttgcatataacctatgcacatcctcctgtatactttaaatca
tctctagattacttataatacctaatacaatgcctacacatcacttcattcacgtggattcaatgtagta
ctyggtgtatggcaaattcaagttttgctttttggaactttgtggaatttttttttccaaatatttttga
tccgcggttggttgaatccatagatgcagaacccatggatacagagggctgactg
>MER93B   Primate MER93 repetitive element - a consensus
tgttaaagtaaattaaaatggagaccaggcctgaagaatccctgagcagacaaagccagttaggcctcat
aagtgaccttaaccttgcttgatttgcaaacataagcaaaacttaacttgagctatttcttgtaaatgcc
tatattaaagaaaaacagaacttaagctcaaccaatcagaagcagccaacaaacttataattatataact
agggactttccaatgggatagaccaaataaggcaactgtataactgtaaccaatcaaatattttctttgc
tttacttctgtgttcatcctataaaagcctcccccttgcattccctcggtggagctcccgaaccacttct
ggtttggagctgcccaattcatgaattgctgtttgctcaaataaactctttaaaattttttattgtgcct
cagtttacctttttaaca
>SATR2   Primate satellite-like sequence - consensus.
tgtacaccctgtgatattattcgtaatatcctagggagatgttactcctaatgtcacagtgggtgtacac
cctgtgatattattcgtaatatcctagggggatgttactcctaatgtcacagggggtgtacaccctgtga
tattattcgtaatatcctagggagatgttactcctaatgtcacagtgggtgtacaccctgtgatattatt
cgtaatatcctagggggatgttactcctaatgtcacagggggtgtacaccctgtgatattattcgtaata
tcctagggggatgttactcctaatgtcacagggggtgta
>GOLEM_C   Nonautonomous DNA transposon - a consensus.
cagtcatgcactgcataatgaygtttcagtcaacratrgaccacatatacgayggtggtcccataagatt
ataatggagcatatatagaaacctgatatatggcacttgatattggcattgcagatcaagtaggggnaaa
tgantgatattcagtaatggtgctgggacatttggttttccatatgaaaaatatatatataaataaaaat
atatataccatctaggtttgtgtaagtacactctatgatgttcacacaatgacaaaattgcctaatgang
catttctcagaatgtatcccngtcattaagtgacgcatgactg
>MLT1A1   Mammalian long terminal repeat (MLT1A1 subfamily) - a consensus.
tgctatggtttgaatgtttttgtcccctccaaaattcatgtgttgaaacttaatkgccaatgtracagta
ttaagaggtggggccttttargaggtgattaggtcatgagggctcctccctcatgaatgggattaatgcc
cttataaaaagggcttgatggagtgggttctctctctctctctcttctgctcttctgccatgtgaggaca
cagygttcctcccctctagaggatgcagcatwcaaggygccatcttggaagcagagascaggccctcacc
agacaccaaacctgctggnaccttgatcttggacttcccagcctccagaactgtgagaaataaatttctg
ttctttataaattacccagtctcaggtattttgttatagcagcacaaatggactaagaca
>L1PREC2   L1PREC2 is an ancient subfamily of L1 - a consensus sequence.
[encoded data, 8236 characters]
acctaaaataaaagttttaaaaaaa
>BLACKJACK   BLACKJACK is an ancient DNA transposon - a partial consensus.
ctgcagaaggtgcatttacatatcactctatgaagcaagacttttcatttagatcaaatgactgttcttc
taaattaattttgcttatttttaatttcaagttttcttgtgcatatatgaaaagtgaagcgatagcttta
atgtgttggcttcattagcagaagaaaactttrcaaacagttaaatgatgccagttttatatcagtgtca
tcagatgcttcaaatagaaaatcagttaattccaataacggtttattttttttcatccaattcatggaat
caaagtaaagcttttggaagttcattctgtcgaaggtaaaacatctgacattattgtgaatgctattgta
aattcagttaaaaagttcaacattgaagataaaattatttgtttttgtagtgataatacaaattttgtca
tggtaaaaacaatgttcttactaaattaagaaacctatggagcagaaatgtacttggaattggttgtggt
acacacataattcataattgcatccaaacaagctgcgatattctacccaacgatatagaagctgtagttg
tcaaaatttacaaatatttatatatacacaattagaaaaattacaaaatttttgtgacgaagctgatatt
aaatacaaaaaatacttcagcatggcagtatattctttctcttttctgcctgtcatcatcaatcggattt
tagaaatgtttgagcctttgaagaactactttgtaaatcaacctaagtgtcctacaatggtattrtaaat
aagtcctctaaattttggttgcattttgttcaaaatcagttggaaatctttaatcaaagtattcaacgaa
cgaagcaccaaaaaacttcagcttttgaagcttttagcaaattgcaattattgaaaacaaagcttgcaaa
caggaagacattgaaatttatccctacaaaagcaagggaggaactgaacaaattaaacgatgagagctca
aacggtgtacaagatttaattttgaaattctataattgtgctttggaatatctcgacttgtgggaagaat
cttttgatggagctcctatttttaattggataaatttatattctgtaccagaatggaatgaaattgagaa
ggcctacaattttgcagcatctaaatttggcgaaacattcaaaagaatcataaatagagaaacttatttg
acgagttttgtcttgtaaaaatatttgttaaagaaaggtactctgaatggaggcaaaaagacagtacctg
tgaaaatatttgggctgaaatatttacacatttcaatataaaaaaaattagattgagaatatcctccatt
tagcagaatttgctctgagcttaccaggtacctcagcacctgtagagagaatattttctcaattaaaaat
attatggtctacagagaagagtcaattgaagatgtcaacaatttcaaatttattaaccataaaatgcaac
tttgaagaagattgcaggcaattttatgaaaaaaattaaaaaaaatacattcttcagaaaaataccagtg
acatggattagagacagatacggctaagaaactgattaaagtatgtgaaaaataattacttatgttatta
ttttttaatattcagataatcaatataagattttttaaatttaatgtacatggacatatgtttttaattt
ttaaaaattttatttttgaaaatattttgaatagaactattttataggtccaccataatattaaaataaa
tttgttagtcatataatttaattatttttagtaccccttttcactctcaaaagtgtcccagtttggatga
taaattatatggtcatccta
>L1M2A1_5   5' end of the primate L1M2A1_5 sequences - a consensus.
atcaagatggctgactagatgcaggtagtatgtgcctcctccatggagaggaaccagaatagttaagtag
atactcacatttyraacagatcgtctaggagagaatgctaggattcaccagagaagagayaggaagcacc
agaagtaagtaaggagagggtttgaggcagcttgcccagccaggaactgactgagagctgggagaggctc
ctggatgtggggaaacagtaagagagaaacccccagggctccacactctgaaayaggcttttatgatctt
ggctatgggagaaacccttgacccactagggcctcgggcctgacatatggagctgcctaaagattgcaca
gagacattgctccagaaagggaacccacacagaatcccacaggcatctgagcctggagcagcctcagctg
ggtgccattttgagagcctagataccagggatctacagacatggctgcagccactgcactgctccaagga
gggagaggggagaccaggcactcccatgcacccctaggagggtacctgctgccctgctatgggctgctgt
gagactgagacatgagtngaccacactccccacagcttcttgcccatgctgcttgcctgggaggtgcccc
accctctctggntcccaggcccaaggtgnntgccattttgagagtttaatgctgggctgcaccccaccct
tggcctgagtttgggctgacgtggctgcagctgccacccagccaaggagggacagggaaaccaggctctc
ctatgcatatctaggacaatacccactgccctgcaatgggctgctgtgagactgagatgtgagtggacca
cactccccacagcttcttgcccatgctgcttgcctgggaggggccccaccctctctggtcccaggcccaa
ggtgccattttgagagtttaatgctgggctgtgccccacccttgggctgagtttgagctgacatggctgc
agctgctgcccagccaaggagggacagggaaaccaggctctcctatgcatacctaggacaatacccactg
ccctgctatgggctgctgtgagactgagacttgagtagaccacactccccacagcttcttgcccatgctg
cttacctgagaggggcccccaccctctctggtcacaagcccacagctggcaccattttgagagtttaatg
ctgggctgtgccccacccttgggctgagtttgaggtgatgtggctgcagctgccacccagctaggggagg
gacaggggagaccaagctctcctaagcacacttaggacaatacccactgccctgctacaggtggctgtgg
gactggggactagcccacccaacccatcacagcttccagcaacaccaacatggactgcttgggtcccagt
gggttgctccaccactgctactgccatcacccacatcacaccagctgcccaggggcctgagaacctgccc
acacacctggcccaccactcccactactagcttctaagcaagccacctggaggcccaagaatcagccctc
caggacccactaacaccagagccagtgtaagctgctctggggcctaaaaacaggcacactcaccccactg
ctgccaccactggggcctaaagactggctcagttggcgtccaagtccccagcaaaacttcaccacaacct
caactaataactgtaccctaagccactgaggaaatcacagataccactgaccctgtgtactgccaaagaa
gtcatacaaagatcacactaccacaggcacccaaaatcaaagccaaagtatcctaactcaatcaacaaca
tatatacatcttcaggaaaaaa
>MLT1E1A   LTR from retrotransposable MaLR element - a consensus.
tgggcagaattctaagatggcccccaagattcccacctcctggtrttcatgccttgtataatcccctccc
cttgagtgtgggtaggacctgtgaatatgatggatatcactcttgtgactatgttatagtatatggcatg
aagggattttgcagatgtaattaattttgcagatgtaataggtccctaatcagttgactttgagttaatc
aaaagggagattatcctgggtgggcctgacctaatcaggtgagcccttaaaaaagncntctaaatccgtc
tngaaagagaagaactaagagagattctcctgctggccttgaagaagtaagctgccatgttgtgangagg
gtctgtgaagagggccacgtggcaaggacctgagggtggcctctaggagctgagagcaatccctggccag
ccaacagccagcaagaaaatagggacctcagtcmtacagctgcaaggaamtgaattctgccaacaacctg
aatgagcttggaagaggattctaagcctcagatgagaacacagccctagccaacaccttgatttcagcct
tgtgagaccctgagcagaggacccagctaagctgtgcccagactcctgacccacagaaactgtgagataa
taaatgtgtgttgttttaagccactaagtttgtggtaatttgttatgcagcaatagaaaactaataca
>MER4E1   Long terminal repeat from an endogenous retrovirus - a consensus.
tgaggactaaactctgattttttttatcttgcccaaattcctatctaaggggtctggggagtcatgccct
acaaatcataaattctcatcagatgggttttatttaaccctatatatcgtgacttactttccaacctgac
tctggcataacattacgagacaaggaagaaaatcaaaatattttaccccaaaacatgtttctttgccata
ttttgaaatggccctgcaaagctgttctttgtgggggaaaatttgcatctgtaaagaatctctattaaca
tagctagatctttttcttccagaccctcccaatcctaaagagattaactaagatctgaataggaaacatt
tgtcatctattgtctctaagggcagccactataagacttcaaaagaactttggtctccacaatctttatc
ttaacctgaacattccctttctatcaatcccaggtctttagacaaactcaaccaattgtcaaccagaaaa
tgtttaaattcacctatagcctggaagccccccccaccccatcctggctttgagttgtcccgcctttctg
gaccaaaccaatgtatttcttaaatgtatttgattgatgtctcatgcctctctaaaatgtataaaaccaa
gctgcgccccgaccaccttgggcacatgttctcaggacctcctgagggctgtgtcacgggccatggtcac
tcatatttggctcagaataaatctcttcaaatattttacagagttcgactcttttcgtcgaca
>PRIMA4_I   a consensus.
[encoded data, 8378 characters]
aggggggaaa
>PRIMA4_LTR   a consensus.
tgtgaaaggaaattaaattttgggaccccaaactcatttagccaaagggaaaagtcaagctgggaactgg
gtcacgcaaacctgcctcccccttttggttcctaaataagatggctacaagatgaaaagctacatgcctc
ccccatattttgcccacaaggaaattcctagtgagctgttaaaacttcaccatggcaatgcaaattgata
gcttatctttacaggtgcagtcaccccggcccaccagacacaaatgcatatctgattgttcccctgcccc
attttgtctgtgttatcttatgtaaaatgcagattccccgcatttttcctctgccccttttgtttatgtc
atcttatgtaaaaaatgcagattcactgagccagacaaaggcatgaatgactatttttccctacccacct
cttacatgaaaactgtgtgcttctcaatatcccaccctttcccctttaaatttggagccctcaaaatcat
cttcggagaaaggcatagacctgtctcccgggcgcatccttaactttggcaaataaatctcctaaaatga
ttgagacttgtctcgtcattttcctcgattgaca
>L1M4B   L1M5 LINE1 repetitive element 5' end - a consensus.
[encoded data, 5041 characters]
ccagtattatcctgataccaaaaccagncaaagacatnacaaaagaaaagaaaa
>L1PA14_5   Primate L1PA14_5 sequence - a consensus.
agggctagtgaacactgaccctgcaggccgatcatctgagaaaccatgtcgggatccatcaaggcagcan
ggggacacagagagcagagaggagtgaagctgggcaccagcctgtctgggctcagyrcrgagccaggaga
acctctccaacacnggaaagggtgagtgagtgagagccccctgggggattcacrctctccacagggacct
gtgcaagactgggaatgggagaatccccctggcccccccacaccccccactgtgcttctagactgaggca
gagagccacctggacattttgcaggggcaactctcgagtccaaggggacctctacaagccttgggcccca
gagcagaccagcaccagtgccatagccccartagaggccacagttntggtgcctgggagcagtaagattg
ctccacccccccttgctagacagggctcagcaccagcttctggcccagtggtcccacttctgcctgaact
cagccagcagctgcagcctcctgttgtcctaggaagcacccggatggcagggtrggtgacccnccaccca
cccctgccactggtagccaggtaggcaangcctgctagagcttcyagcccagtggtcccacttctgtgtg
aactcagctggagggtgcagcctcctgttgtcccaggaagaccccacccacccctgccactggtagccag
gtgggcaacgcctgctagagcttctggcccagtggtcctacttctgtgtgaactcagctggagggtrcag
cctcctgttgtcccaggaaacacctggatggcagggcaggtgaccccacccacccctgccactggtagcc
aggtgggcaatacctgctagagcttctagcccagtngtcctacttctgcctgaanttgctgaggggtaca
gcctcctgttgccctggaaacacccagatggcagggcaggcaactccacccacccctacctcttatagcc
agatgggccacacctgctagagcttccagcccagtggtcccacttctgcctgaactctgtgggcaggcac
aaccctatgtttccccaggaagcacacagacagcagattagggctaacctggcaaggatacagcttgtct
gccaactgtggcccctgcctgagggagccccgtggaccagaacacccaacaaaagaaatgtgggcatgga
gacagtaattggagggggctcctccaagacccaggagtggactagaatcaaagccagtcaacngaaccca
ccttataccataatcaaacccccaagggcatcaaagaagaaaaaagaaaaaaaaatccatccaaaaggac
agcaacttcaaagactgaaggaacatcagcccacacaaatgagaaagaaccagtgcaagaactctggcaa
ctcaaaaagccagagtgtcttctttcctccaaatgaccacactagttccccagcaatggttcttaaccag
gctgaaatggctgaaatgtcagaaatagaattcagaatatggataggaatgaagatcatcaacattcagg
agaaagttgaaacccaatccaaggaatctaagaaatacaataaaatratacaggagctaaaagacaaaat
agccattttaaaaaagaaccaaactgatctgatagagctgaaaaactcactacaagaatttcataatgca
atcacaagtattaacagcagaatagaccaagctgaggaaagaatctcagagcttgaagactggctctctg
aaataactcagtcagacaaaaa
>LTR13A   LTR from a HERVK-like endogenous retrovirus.
tgtgggcggaggattaccyaggtgccgaggcaagagactgaaggcacaaactgtttcagtataataaaga
aaatagttagaataagaatagtcataatacaaattagatatagagatgatcatggacaattatcaatcat
tattataaacattattaatcattagcttttaatattactctttgttgcattactaatataacctaggaat
aaccggcgggtatagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagcc
ctctgtcacgcccgcataagggccgcttgagggctccttggtcaagcggtaacgccagtgtctgggaagg
cacccgttacttagcagaccgygaaagggagtctcctttccttggaggagtcagggaacactctgctcca
ccagcttcttgtggraggctggatattatccaggcctgcccgcagtcatccggaggcctaaacccctccc
tgtggtgctgtgcttcaatggtcacgctccttgtccactttcatgttcctcccgtactcctggttcctct
ttgaagttcgtagtagatagcggtagaagaaatagtgaaagtcttaaagtctttgatctttcttataagt
gcatagaagaaaacgctgacgtatgctgccttctctctctgcttcggctacctaaaagggaagggccccc
tgtcctatgatcacgtgacttgcttcaccttgtcaatcacttagaagattcaccctccttaccctgcccc
cttgtcttgtatgcaataaatatcagcgcgcccagccgttcggggccactaccggtctccgcgtcttggt
ggtagtggtcccccgggcccagctgttttctctttatctctttgtcttgtgtctttatttattacaatct
ctcgtctccgcacacggggagaacacccgctaagccccgtagggctggaccctaca
>HAL1C   Primate HAL1C repetitive element - a consensus.
ctmcaaaaawrwcaaraamargaaagggaratraatcwayayaaaaaccatrcyctymwcwtagcytrar
gayagagaatracccaaacttyamartaactgtragyraaaagawaraawtcaccwawtcccarwgtktc
atctcymktgstcctgctaaarccyatgtcccyacttamkscwytgtgrccwgcmacaaggyrtgrykgt
ragcaaaarcaaaytraaaaacacycagggargacagagggragctagnnaaannngctaaggtyyatyt
aaaancaaaactaccaccanaaagantaagtccaccctaagtgaaaatactanaaaagtdtccaggttaa
tnagacatggcttacagggaagggacttaaaagtaggcatgatatgaagnaacagkcttcmaaacacana
gcttntcagggagaaaaaaggtaaaaaggaaggaagaggaatcctttggcaantgggtggtaaaggggaa
aagaagcaaargggnaaatttagggtcctgcaagacaaaagagaaccacaacatnagaggacccancact
cctcctaccaccaaaacaaaaccaaaaaaacctncnaaagaayctggactttgctanactgacaaaagaa
gntgccattgaactagvaatcttrtaaaatatttcaaaatcacaaaaatgaacaagaaaaaaatttacaa
agctactatagaaatcagaaaatgaaaataaaaacatttcatttgatgaaaatcacccccaaaaaaacaa
ccacgaagcagaagaaaactgtaatacaacactccaaatagaattaaatatactcaaacaagcatttgag
gatatgaaaaacatgaaaaattaccttgaatcagaaatttaaaaactaagaatagaaatggacaaaaaaa
aggaaaaggaagaaataaaaaagagttgattaaactcaggaaaaaaatggaagaaaaagacaaaattatc
tcagaaatgaagaataaattacaaggtgcccaagggagaatagattcaaatgaatgaaaatttaataaga
ggcattgaagaaaaaatggaaaataaaaaacaaaggaaaataaaccaagaggnanaatgaaaatgagata
aaagaaagaagtaaaaagggtcagagagaaagtggtggaaatggaagacaggcaaagaagaattaatatt
tgtattattggagtccctgaagaagaaaaacaaaacaatgaaacagaactaatatttaaaactataatcc
aagaaaactttccagaaataaaaaaagacctgaatctacatattgaaagggcccactntacatattgaaa
gggcccacgggtacctggaaaaattaaacccagaatgatcaactctaagacaatatcctagtaaaactat
tagatttcaaaaataaagaaaaaatcctcaaggcctccaggcaaaaagatcaaataatttacaaaagaaa
aaaaattagattggcatcagacttctcaaaaacaacatacaaagcaaggcaacagtggaacagcattttt
aagaaacttaatgaaagaaagtgtaaaccaaggattttatatccagccaagctgtncttcaagtatcaag
gttatagaaaaacagttttgaacatacaakannngaactcaaggaatactgtactcatgagcccttcctg
aggaatmtactagaggatgaggtgtatgagcttcatccaaccaaaakaatgactgggaaaacttcagcaa
aaggactgatggtgagcattttaaaatatataaatatagaactaagactaaaataaaagtggggncatgg
gtaaaaatagatatataaanattatatatttgacaaagtagaaacaatacaactaaaaaaagagaaaaga
aagtagaataagatgatttttatatargyaataggtngaaangatatngtaaaangttaaaaaattctta
aaa
>HERVIP10F   by LTR10F - a consensus sequence.
[encoded data, 7810 characters]
aagagaaagctgtaagaaaaatgcaagaggaggaagt
>MLT1F2   MALR long terminal repeat (MLT1F2 subfamily) - a consensus.
tgtggtaggcagcctctaagatggcccccaatgatccccacctcctggtattcatgcccttgtgtaatcc
cctccccttgagtgtgggctggacctagtgacttgcttctaatgaatagaatatggcaaaagtgatggga
tgtcacttctgagattaggttataaaagactgtggcttctatcttgctctctctctcttgctctactcac
tcacttgctctgangaagctgccatgttgtgagctgccctntggngaggaactcarggctgtctctggtc
aacagcactgaggaactgaatcctgccaacagcnnnrtgagtaagcttggaagcngatcctcccctcnag
ttgagccttgagatgagactgcagtcctggctgacaccttgattgcagccttgtgagagaccctgagcca
gaagacccaactaagctacncctagattcctaacccacagaaactgtgagataataaatgttgttttaag
ccactaantttgggggtaatttgttatacagca
>MLT1FR   MLT1- LTR retrotransposon internal sequence - a consensus.
caggacttgatgrttttgaaaattctcagcctctccagatggcaaaagatgctaaaattaagaaatggct
yctgmgcaggaaaacatggtctaagataaagctangggtgtgactgtaaatcttttgttaaaanctcaga
aagatcaaaggatcagagtactattcagtcacacaaagggccctttaaagagattaagggtgtgtgcctc
acagatcctctcaatcaaacaatagggcttctaggaagcttaagggtattgtccctcagccatctcagca
gaagcccaaggtagagaagggcttannaaaggcttagntctcaaagagatttgtgggtgtggctttttgt
ctaatggagtgaaccccaataagattcacaggaracccacaaagtttttaagagaattatattagcagaa
acactgccagcttggactgaaagggacagagacagtacaaaatgaaaagaggcctttggacccccaaaat
tctactggcaggaagcaggctgagaaaactactcagctgcaaacatgtgctacctttcatgaaaaaggaa
ggatgactcagagggtagaaccaagagcccagagggtagagccaagagccatggagaattattcccaggc
cttgagacctaatcaaggaacttccaacatttgcctagctggatttcagaattgctatggaccagtgact
cctttgtgcctcccattcattttccctctcctttccccctttttgaataggaatgtctatagcagttatc
ctatgcctgtcccaccattgtatgttgggtgtgttgggggcagataacttgtctctttagtttcacaggt
ctacagattgagaggaactgtactcaaggagctgtacttaaggaactacacccaaggagcctcatccaca
cctggacctgatttagatgatgagattctggactttgagctgatgctataatgggatgagacttttgggg
aatcttgggaggggkgaatgtatcttgcatggagggggtgaatgtattttgcatgtgggagggatgtgaa
tcattggggggccagagggtagac
>HERVIP10FH   by LTR10F - a consensus sequence.
[encoded data, 5175 characters]
>LTR10F   retrovirus - a consensus sequence.
tgttaaatatgaattctaaatttctcttcaaagaattaatatgtcagtatgttcaattctttgccttcta
cttttaaacttaacttcctcgtaaagcaaccttttccgattacctgctccaccctgactcattccgatta
cctgctccaccctgactcattccgattacctaccacctgctccaccctgactcattcattctccaccctg
cataaccatttttttttcccgccaaaccactcaccccgtcactctctttaaattagtcaatcggaattag
tttagcctgtgcggtctaaccctagccaataggggaatgacacagcagtagggaccacgtgcatcaggaa
taagaacccctttccctcccttgtccaggtgtgcgctcaccattgctccatctgtgagggtgcacccttc
tatagaagtaccttgccttgctgagaattaaaaagaaaattttatattcgagtgctatttcttttgcggc
accgaaactttatatataaca
>MER34B_I   Internal part of the MER34B endogenous retrovirus.
[encoded data, 5396 characters]
gcaaactttctaaaaataaagtttcaatggggggac
>MER57A_I   a consensus sequence.
[encoded data, 6248 characters]
ttgagaggatgaccaaaaggggggaat
>PRIMAX_I   a partial consensus.
[encoded data, 4118 characters]
aaggcttttaaaattccttggccaaaagctcttccattggtt
>MER75B   Nonautonomous DNA transposon - a consensus.
cccatttcccgtttgccccaagaatactcttgtctctaatcctaatgtaacatcatatacatttctgtta
cattaggattagagacaagttctgtttagaaataactccaagaacagtttttatattttattttcacatt
gaaaatcagtcagatttgcttcagcctcaaagagcatgtttatgtaaaattaaatgagcgctggcagcga
gctgcactttttttttctaaacgggaaatggg
>MLT2B3   LTR of a variant of HERVL endogenous retrovirus - a consensus.
tgtgatggttgattttgggtgtcaacttgactggattaagggatacccagatagctggtaaagcattatt
tattctcaatcattgcattaattattctcaatgcttcagtaggcactgagcccatccctcttctgctgaa
agggaaacccaggtggtttggcatttgattagaatgattgggctgccccaggtgtgtctgtgagggtgtt
tctrgaggagattggcntgtgagtcggtggactgagtggggaagatctgccctcaatgtgggnaggcacc
atccaatcagctgggggcccagatggaacaaaaaggyagaggaagggtgaattcttgnnctctctcttct
agagccaggatgcccttcttctcctgcccttggatgtcagaactccaggttctctggcctttggactcta
ggacttgcaccagcagcccctgggctctcaggccttcrgccttggactgagggactgagagttacaccat
cagcttccttggttctgaggccttcagacttggactgagccacactaccggcttccctggttctccagct
tgcagatgcagatggcctattgtgggacttctcagcctccataatcaagtgagccaattcccctaataaa
tcccttctcatatatctctctatatatatatatatctctctatgtatcctatcrgttctgtctctctgga
gaaccctgactaaaaca
>MER66C   internal sequence belongs to the MER4I-group; subfamily MER66C.
tgaggtaggagactggcaggacttgttttctggtcacaaccctgctgaccaaaacaggatctggtccaga
caggataaagtgaagaaacnrgcaggaaccagcagatggtgacaaaagygatccctagctgccctcattg
ctcattagcataagacactcccaccagcgccatgacagtttacaaatgccatggcaatgacccngaagtt
accacccctttccatggcaatgacctggaagttactgcccctttcctagaaagttctaaataacctgccc
ctcaatttgcattgacccaccccttaatttgcatgtaattgaaagtgggtttaagtgagtataaatacag
ttgccaagagcccatacattgcngactctgggtgcactgcctatgagttagccctgctctgcaaggagca
gtaccgttcaataaaagattgctgtctaacaccactggctcacccttgaattctttcctgggtaaagcca
agaaccctcctgggctaagccccaattttggggcttrcctgtcctgcatcatctgnctaccatca
>MER52D   Long terminal repeat from MER4I-group retroelement.
tgatgttaatgatggcagcggtgggccrtccrgagtggccgctgccatcacgccggctgcagcggggagg
tgtgagcagtggcggcaggagcggctgtgggagcagcagtggtggcggtgggacccctgtgccctgtgtc
ccctgtgccctgcatccccaaggcagcygactgcaccacccccaccctcacacagccaggcaggacccgc
tcccaggcccagagcctccgccactccagaccctggccccgtgtcaccactctcacccgccaccactgcg
gggagggcgcagggagganggcagagctgggncccnggcgctgccangccccatggagccggcgggagcc
agggacaagtgggagcccccccggagcccgccgccctgggggccaccgcgatggggccaggccgagtcgc
ccactggagggggagcagtgcggttgggcatagaggggcgggcagagaggggcccagcgaggacctggag
cccccaccccaggctgcaaggaggcacagccagggctgcatgctccacggagctggtgggagccagggag
caggcaggagccccgcccctncngnnnnggcagggtgggagctcccaggtgcagctgcagctgccctgct
gcagctgtggacccaggcatctctgcactcttgggggcccgggaaggccccccctacccctgcaggctng
grggtgtctgctcccgctgcctggcctctccctgctcccagcacctgctccratctcggagcarngttgg
ggccaagccygggcgctgtcacagcctggccgggtgtgcacacactcggggcagcgctgacacaccagcc
ccctgccacctcggccccctccagactttgggcrccaacaagcatgggagggaggccaagggggggctga
gggcagctcggtnctggcctgcaggtgccccttggcatgarcagcctgggyrccatgracagtggcagga
ggcagacaggctcctgggyggaagggggygggtccccagtgaagccccaccttcaagccagggagggcct
gaagcctgggggctgggctgccagtcccrcagaccagagtgggaacttgtggtgccttttcctgggcctg
cccatggccgcccatggaccaatcggcatgcacttcctcccctctgaggcccataaaagccccaggctca
gccagaccagagacagagstgcacagaggacctacccgcagagagatgagggctctgctagagctgagga
gatgacgggatgaccagctgcagagcaggagctacccactccagggtctcctctctgctgagagctgaag
acttgatgggatgacctgcctgcagagaggagctaccctctctgctaagagctgaacactcattgggaca
ccctggctacggagaggagctgcccactgcrggtctcctctgagctgttctattgctcaataaagctcct
cttcgtcttgctcaccctccacttgtctgygtacctcattcttcctggacrcaggacaagaactcgggac
ctgctaaatggcgaggctaaaagagctgtaacacaaacagggctgaaacatgccccttgcttgccacatt
gcgggtgacaagaagaagagaagagaggagagaaggagagaagagctgtggccctttggggagcccagac
ctgggagctccctgagccagggctgtgactccctctttggggccctgtggttcctggcatctccaagctt
cyaggcaccactctgcattccccggtgccagctgtggaagctgcttgtggtgcgcctggtccagctgcag
cctcgcagagagccagcacccatgccggcacctggagctgcctgccccactgcagcagccngcatgyctg
actgtgtgcagtggccggaccccacgctcactcacacacccctcacngctccacacctgrcttnnccttg
gcaggnntggatcnaggnccttggcaggcatgggatccaggccrgtagcntgagccaagcacagcctgcc
aggcysagtgggcccgagcaaaactcaggcaaagghaccachgghcacagaggtttctggccagaaaagb
gacaccccaaggatcccgtaaca
>MER41G   internal sequence belongs to the MER4I group; subfamily MER41G.
tgagataggaatagcactgggtggtcgcaggaggatggaaaaacccaaacaacagctaaaacaagaacta
ggcaaagaaaccacaggataacagaaaacccaaaataagggagagaaaatggccaaaaccctggtcaggg
tgacatgtccatgactcttccaggcaaacccaaataagggagaaagggggtggtaatcaggggnggggtc
cctgaaatcccctccttttccagaatacctaatgattattccaccccctaattaaagaaacacccataaa
ataggaatgctgggtggtcacaggagaagcaggaaaatatcaagcagcaatttcacatarcagcaagaaa
ggagctgttaaaattagctacaaggacaaggatgagcctgggctgataagaccctaacaaacaggatggg
ggctaagctggctgaaactggctrggtccaacatggcactggatttgacccatgccctaccccagaccta
attatatgctcattaccayactaaatcacacacccaccagtgccatgacagatctgagcatgcccatatt
tagtataaaaatgggtggcacctcaattctaagaaatccccacctttttcctagaaaacctaatgattat
tccaccccctaattagaagagcccataaaattagaaacccaaactccattgtgcacgactcattctcccg
agcacgcccgcacttctctcttaagtgtgtacttttgctttgcaataaaagcttcttgcctttcgcttca
ttctgactcatccctgaattctttcttgcgatggtgtcaagaacctggacactggctggggctggggctg
gggtctcactggcatctggagacccacctnagccctccagcaaca
>MER21C   Long terminal repeat of retrovirus-like element - a consensus.
tgtgatataataagaaatatatatttggtctctgcccctggttcctggcacagagctcctaaaacccttg
taatttcctgagtgataggggtgataggagcatcttttgttctaatatttggtctttgaccctagttcct
gacacagagctcctaaaacccttggaatttcctgagggtgataggagtatcttttntttatgctaatgag
gtgactcgtggctgggggctcctagatagcttcaggatgggggctggtcaccagaaagaccaagccatga
ttagagggttggaactttcagccccacccccccatcctccagggaggggagaggggcttggagattgagt
tgatcaccaatggccaatgatttaatcaatcatgcctacgtaatgaagcctccataaaatccctaaagga
cagggttccagagagcttctgggttgctgaacacatggaggtgctgggagggtggtgcgcccggagaggg
catggaagctccgtgccccccccataccttgccctatgcatctcttccatctggctgttcatctgtatcc
tttgtaatatcctttataataaactggtaaatataagtaaaatgtttccctgagttctgtgagccattct
agcaaattattgaacctgaggagggggtcgtrggaacccccaatttatagccagttgttagttggtcaga
agtacaggtcacaacctgggacttgcaattggcatctgaagtgggggcagtcttgtgggactgagccctt
taacctgtgggatctgatgctaactccagggtagatagtgtcagaattgaattaaattataggacaccca
gttggtgtccsccagagaattggagaattgcttggtgngtgtggaaaaaccccacacatttggtgacaga
agtgttgtgagagtagagaaaaaca
>LTR20C   Long terminal repeat LTR20C - a consensus.
tgagggagaagaaaagnaggaaaaatcagttnggtaaacagctaaggctggtccttggagaagcagcctg
cctgaaaaatcacagctacaggcaaaaatagagcagcctggggaaaaaaaaaaaaaaaaaaaaactcagg
ctgcacctgcacagataagccacagataagcagggcagggtccagcacagaagccttttgttctttgtgt
aattagcgggctcccaggaaaaagtttcctccccttttcaggcatatacatggtgggctccatgggaact
tgcacagggaggaggggggcttacctaaaacaaacccacagttatacaaacaagagaagcagcgctttgt
gcttgcctagagacatacccacagctgcataagataaggggagttgcacagacagctttactgataagag
aagttactcaaacagctacagagatgagaggagtttcttataaaagcttttgaattcagctgtaaaaacg
gcaatccacttggactcccctctctgctgcagagagctttcttctttcgcttattaaactttcrctccaa
cctcaccctttgtgtccatgctccttaattttcttggttgtgagacaaagaactcnggntaatacctcag
acaatgagaaactgcnacattaaggtgcattggtgagactgcaaca
>L1PBA1_5   Primate L1PBA1_5 LINE1 repetitive element - a consensus.
atcatggcrgatgggaggcaggactagattgcagctccagacagagcagcatgcggaggcttgcattgtg
aattttagctccagattgactgcaagaacaaaccagcaatcccgagaggacccacagaccctctgaagga
agcagactgctcctgcaggacccrggagacaccccaaatactgtgagtgccccaactgcrgaagtgggaa
agggagaccctcctctcccgaacacacacccccactggagaagctgaaggtctgtttgcgggagaagttt
ctgactttacctggagctgagtcaakttagagagccgagcgaaaatacaggggtagaggaagcagcagaa
aggccctgggagctcgctgggtccccaagcagsccattcctgcctggcaccacagggatccatcgggagg
gtggccagaggagcagggggtaaaactccacagggagaaggaawtctctagctgaactttgtaacaattt
gaacggggygagaagcctcctggccagaactcaggggagggcgcraatccggygtgcagactycacaggc
aggggaagaacyaaagcccttttctttcgcagctgggagg
>L1MB4_5   5' end of L1MB4_5/6 subfamily: a consensus.
aaaggtagtgatatcagcaaaaatggtagagtaggcagctccaagctccyatccctccacagaaacatta
aaaaaaaaaagcagaaactgtcagaaccaactttgtcagaactctggaaaacagtcaaaggtttacagca
accaagtaaatgctgaatcaagaaaaaggcaacttcaaaatggtaggaaagttttgtggcatttttactt
gcccttgccccacccccttccccagcttggtggcagtcttgaagatagagcagcagatagcagcccatat
tcccagtgtgggagcccctggtccctggttctagagggagcagagcagaccttattcacaaattattgtg
tttgtctgttctaacctgtctgggggctacctgaaggactgatgcaaggcacttgtctntgtttcaccta
actcagaactcactcagggtggaaaagcagtaggcattgctcaaaaacattgtaaggcaaayaaaaaacc
tacagacacctggggcaaaagattattagttgagacatacaataaagaccacctaaagcctgggaggaaa
agctggggagagagtttctttgggaaattaggacattcaaaagcaccccatgtatactggggaatttaga
aagccatgcacatgcccagggcaagatgcatgctcagaaaagacctgagaagaccctaagctttcacctc
tggctgatctcttaggctcagtgcaagcctggctaagtgttgaaggggagtgccccagcacagagccaat
ctgcaaagactgggagagrtgtttttttttgtttttttttgtttgtttagctnctggcattcaaggaaat
ctctgtcanancactancatgcttatctcattgtctcttgccnngcctttgttcntgngtnatgcctttt
ctcctggcattcaagvaaataaagaaatctcatgtcaaaaaaacactagctgaacacaagctaaggaaca
gagacttcagtgaccacacatgacaaggaatacagtctttacaaaaatagtttggaaaagtcactaaaca
aatagactacanaaataaagccttcaacaatcaaaaaaaacaaaccctggggaaannnggargaraatct
gatttccagagttaccaccattataatattcaaatgtccagttttcaacaaaaacaacaanaaaaatccc
acaaggcatacaaagaaacaggaaagtatggcccattcaaaggaacaaaataaattgacagaaactgtcc
ctnaggaagtctagacattggacttantagacaaagactttaaaaccaactgtattaaatatgctcaaag
agctaaaggaaaacatagacaaagaactaaaggaaatcaggaaaanaatatatgaacaaaataaagagag
aaattataaaaaggaaccaaacagaaattctggagctgaaaagtacaataactaaaataaaaaatnaact
agaagakatcaaaagcagattttaacaggcagaagaaagaattancnaacttgaagatagnacaattgaa
attayykagtctraagagnagaaagaaaaaagaataaanaaaaaatgaacagagcctaagrgacctgtgn
gacatcatcgagtatancaacatatacattatgggaatacaaggagaaaagagagnaaaagaaagaatat
ttaaataaataatggccaaaaattcctaaatttgatgaaagacatgatntatanatcnaaagccaatvaa
ttccaagtagaataaactcaaagagatccacattgavacacatta
>LTR73   Long terminal repeat of a MER4-type retrovirus - a consensus.
ttgttacccagtgtaatgcctactacatgacatagctgaatttctaccctgccctaactctgcttatctt
taagaaacaggatgcctgcgataaaaagttccctttgtaaccagaccagctgagactggttagaaccaag
atagcagaccaaatgacttcaaaaagacctcaggcttcattataatctcatttccatgctaaatgacact
cccaccagtgccatgacagttgacaatcaccatgacaatgactrgaagaagccataaaaggacaaaaagg
aaggcagcactcyagttctgrgaagttcactgcccattyccagaaaagacatgaatattcctccccttgc
ttttaatgcccaaccccttcattaaagaaaccctatattttaacttcctcacccctcactagttgagaag
ttgatttgtgagccatgctccyacttctcaattccatggccatcgaataaagcctgcactgcttgacact
cactttcggttttgtgtattggcttcgtgacaccaaacagggaaagaccccatcttttgggggactggct
ttgtcagtaaca
>HARLEQUINLTR   Long terminal repeat of the HARLEQUIN retrovirus - a consensus.
taagggaggagaccacccctcatattgtcttatgcccaatttctgcctccaaagaaagaaraagtaaaaa
ctaaaaggcagaaatgaaatccacaggcagacagcccggcgccacaccctgggcctggtagttaaagatc
gacccctgacctaatcggttatgttatctatagattacagacattgtatagaaaagcactgtgaaaatcc
ctgtcctgttctgttccgttctaattaccggtgcatgcagcccccagtcacataccccctgcttgctcaa
tcgatcacgaccctctcacgcggacccccttagagttgtgagcccttaaaagggacaggaattgctcact
cggggagctcggttcttggagacgtgagtcttgccgawgctcccggccgaataaagcccttccttcttta
actcggtgtctgaggggttttgtctggggctcgtcctgctaca
>LTR12D   LTR from human ERV9-like endogenous retrovirus- a consensus.
tgagaggtgacaacgtgctagcagccctcgctcgctctcggcgcctcctcggcctcggcgtccgctctgg
ccgcgctcgaggagcccttcagcccgccgctgcgctgtgggggcccctctctggggctggccgaggccgg
agccggctccctctgctcgcggggaggtgtggagggagaggcgcgggcgggagccggggctgcgcgcggc
gctcgcgggccggcgcgggttccgggtgggcgcgggctcggcgggccccgcacttggcgcagccggccgg
cgcctgctgggcttgatcgggggacgagctccctctgggctgccggagtgcccgggctaggtgccgcaaa
gtcccgcggcgagtgccagtgagaggtgaagccggctgggcttctgggacgggtggggacttggagaact
tttctgtctagctaaaggattgtaaacgcaccaatcagcactctgtgtctagctaaaggtttgtaaacgc
accaatcagcactctgtgtctagctaaaggtttgtaaacgcaccaatcagngctctgtgtctagctaatc
tggtggggacttggagaacttttgtgtctagctaaaggattgtaaacgcaccaatcagcactctgtgtct
agctaaaggtttgtaaacgcaccaatcagcactctgtcaaaacggaccaatcagctctctgtaaaatgga
ccaatcagctctctgtaaaatggaccaatcagctctctgtaaaatggaccaatcagcaggatgtgggtgg
ggccagataagggaataaaagcaggccacccgagccagcagcggcaacctgctcgggtccccttccatgc
tgtggaagctttgttcttttgctctttgcaataaatcttgctgctgctcactctttgggtcygtgccgcc
tttatgagctgtaacactcaccgcgaaggtctgcagcttcactcctgaagccagcgagaccacgaaccca
ccgggaggaacgaacaactccggacggaaggaacgaacaactccagacgcgccgcctttaagagctgtaa
cactcaccgcgaaggtctgcagcttcactcctgaagtcagcgagaccacgaacccaccagaaggaagaaa
ctccggacacatctgaacatctgaaggaacaaactccggacacaccatctttaagaactgtaacactcac
cgcgagggtccgcggcttcattcttgaagtcagcgagaccaagaacccaccaattcnggacaca
>LTR12E   LTR from human ERV9-like endogenous retrovirus- a consensus.
tgagaggtgacaacgtgctagcagncctcncagccctcgctcgctctcggcgcctcctcggcctbggcgy
ccactctggccgcgcttgaggagcccttcagcccaccgctgcactgtgggagcccctctctgggctggcc
aaggccggagccggctccctctgcttgcggggaggtgtggagggagaggcgcgggcgggaaccggggctg
cgcgcggcgcttgcgggccagcgcgrgttccgggtgggcgcgggctcggcgggccccgcactcggagcgg
ccggccggccctgctggccccgggcaatgaggggcttagcacccgggccagcggctgcggagggtgtact
gggtcccccagcagtgccggcccaccggcgctgcgctcgatttctcgccgggccttagctgcctccccgc
ggggcagggctcgggacctgcagcccgccatgcctgagcctcccacccactccatgggctcctgtgcggc
ccgagcctccccaacgagcgccgccccctgctccacggcgcccagtcccatcgaccacccaagggctgag
gagtgcgggcgcacggcgngggactggcaggcagctccacctgcggccctggtgcgggatccactaggtg
aagccggctgggcttctgggtcgggtggggacttggagaacttttctgtctagctaaaggattgtaaaca
caccaatcagcactctgtgtctagctaaaggtttgtaaatgcaccaatcagcactctgtgtctagctaaa
ggtttgtaaatgcaccaatcagcactctgtatctagctaatctggtggggacttggagaacttttctgtc
aaaggtttgtaacgcaccaatcgggtggggacttggagcactnctgtgtctagctaaaggtttgtaaatg
caccaatcagcactctgtaaaaacggaccaatcagcactctgtaaaatggaccaatcagcaggatgtggg
tggggccaaataagggaataaaagctggccacccgagccagcagtggcaacccgctcgggtccccttcca
cgctgtggaagctttgttcttttgctcttcgcaataaatcttgctgctgctcactctttgggtccgcact
acctttatgagctgtaacactcaccgcgaaggtctgcagcttcactcctgaagtcagcgagaccacgaac
ccaccgggaggaacaaacaactccggacgcgccacctttaagagctgtaacactcactgcgaaggtctgc
agcttcactcctgaagtccagcgagaccacgaacccaccagaaggaagaaactccggacaca
>MLT2B4   LTR of a variant of HERVL endogenous retrovirus - a consensus.
tgtgatggttaattttatgtgtcaacttgactgggccatrgggtgcccagatatttggtcaaacattatt
ctgggtgtgtctgtgagggtgtttctgggatgagattaacatttgaattggtagactgagtaaagcagat
tgccctccccaatgtgggtgggcctcatccaatcmgttgaaggcctgaatagaacaaaaaggctgactct
cccctgagtaagagagaattcctcctgcctgactgcctttgaactgggacatcggtctttttcctgcctt
tagactcaaactgaaacatcagctcttcctgggtcttaagcctgctggccttcagactggaactacacca
tcggctctcctggttctcaggccttcagacttggactggaactacaccatcagctctcctgggtctccag
cttgccaactcaccctgcagatcttgggacttctcagcctccataatcatrtgagccaattccttataat
aaatctctctcttntatatataxtaccacatcctattggttctgtttctctggagaaccctaataca
>MER9B   Long terminal repeat of the HERVK9B endogenous retrovirus. 
tgttggtagcaagccctaagcctgtcataaacaggccttaaagaaactggccataaacaggatttctgca
gcaatgtgacatgctcatgatggctrtcatgcacactgctaraagttgttggtttactggagcagggcaa
ggaacacctggcctgcccggagcagaaaactgctcaaaccacaaacaatagcaggagcggcctgtgcctt
aacaacatgtttttgctgcagataatcagccagagcctgtttctctrctccttgctaagaatgctttgtt
tcccataaggaatgcttttagctaatctataatctatagaaacaatgcttatcactggcttgctgtcaat
aaatatgtgggtcaaactctgtttgtggctctcagctctgaaggctgttagccccctgattcccacttta
cactctatttctgtgtctttgtctttaattcctctagcgccgctgggttagggtctccacgaccgagctg
gtctcggca
>SVA2   SVA2 is a SINE-like retrotransposon - a consensus.
caccgtctgggaagtgaggagcgcctctgcccggccgccgcaccgtctgggaagtgaggagcgcctctgc
ccggccgccgcaccgtctgggaagtgaggagcgcctctgcccggccgccgtgcaaccctccaagtgtgaa
gtgacagccttgtgtgtgatctttctgccctccccaagtttgcattttcgacattaaagtttacttttta
attaaaa
>HERV39   Internal part of the HERV39 endogenous retrovirus.
[encoded data, 9159 characters]
cgtctgcgttcctgtaccccccaggactgagaagtgacaaaagacaggaggaat
>MLT1H2   Mammalian long terminal repeat (MLT1H2 subfamily) - a consensus.
tgtggtagatggttacattggtggcccccaatgaaccatacctcctagtattcatgcccttgtgtagtcc
cctcccacattgactctgggcttggccatgtgacttgctttggccaatgggacattagcaaatgtgatgc
aagcagaggcttgataagtgcttgcacattggggcttgtcctcttggaatactccctcttggaacccagc
tgccatgctaaaagaagctcaggctagactattggatgatgagaggccacatgggagagagaccctggaa
gatgagaggccatcttggacattccagccccagtcaagctcccagctgaatgcagccacatgagtgaccc
cagctacaccatgtggagcagaagaaccacccagctgagcccagccaacacagaatcatgagaaataata
aattgttgttttaagccactaagttttggggtggtttgttatacagcaatagataactgaaaca
>LTR10G   LTR from a human endogenous retrovirus (LTR10G subfamily).
tgtaagatacaatgaatttctctgagtttctcttcaaagatttagcctgctaacttccttgtcctttgtt
ctcaaactcaactttcttgttcctccttgcccctagttactgtaaaacagcctacccccttcccatcagc
tctaatcaataactcacatctgttcccttggttacctgcacccattgttcccccgaaactgcacgtctca
catgcttcaccactgtacctcacrtcccccttcccttccatatttagaaaaatatttgcaagtagccaat
cgggtcagctcagattgtgcagtccgaccccagcccatgggggagtgacacagaggtagggactacgcgt
cagagataaaaaccccctgctctcctttgttccgtgtgctcttgcgatcttgattgacgcgagtggcacc
cttctgcagaagtaaattgccttgctgagaaaacttttgcctgagtgctggtttcactttgcggcaccaa
gcatttattcctagagcatttttatatccaaca
>MER4A1   internal sequence belongs to the MER4I group; subfamily MER4A1.
tgtgaaaggaaaataaatcttggggccccaaaatcactaagctaaagggaaaagtcaagctgggaactgc
ttagggcaaacctgcctcccattctattcaaagtcacccctctgctcactgagataaatgcatatctgat
tgcctcctttggaaaggctaatcagaaactcaaaagaatgcaaccatttgtctctcacctacctgtgacc
tggaagccccctccccgcttcgagtcttcctgcctttgcttcaagttgtcccgcctttccagaccgaacc
aatgtwcwtcttacatatattgattgatgtctcatgtctccctaaaatgtataaaaccaagctgtgctct
gaccaccttgggcacatgtcgtcaggacctcctgaggctgtgtcacgggtgcgcgtcctcaaccttggca
aaataaactttctaaattaactgagacctgtctcagattttcagggttcaca
>MER4D1   Long terminal repeat of retrovirus-like element - a consensus.
tgtaaaccaaaaataaaattctaagccccccaaccaactgaatggacccctcctcttggccaagggyatt
ccaaagtaaacctgaaaaactagttcaggccatgatgggaaggggtggtcggacatgcctcattataccc
tcctccctttggaattcaggcacarctgaccagcattaacattaaaacagagaccttaagactgacaaaa
cagactctttgtagcaataagataccaaattccaacctgactctagtatagcatcacatgacagatagca
ggccctgaaagaaatcaaagtattttaccccaaaatatatttctttgacatattttgaaatggccctgca
aagctgtctcttgtggggaaaatctacattctgtagagaatccccttccctttccaggtctttttcctga
tccaggagagaattaactaagagtctggcacctttttaagtctgataagaaacatttacaatctattctc
tctgaagcctgctacctggaggcttcatctgcataataagaaccttggtctccacaaccccttatcttaa
cccagacactcctttctattgattccaggtctttagataataacttaactctttcaaccaattgccaatc
agaaaatctttgaatccaccatatgacctggaagcccccccctccacttcgagttgtccygcctttccag
accraaccaatgtacatcttacatgtattgattgatgtcttatgtctccctaaaatatataaaaccaagc
tgtagcccraccaccttgggcacatgttctcaggatctcctggggctgtgtcanaggccatggtcactca
tatttggctcagaataaatctcttcaaatattttacagagtttgactcttttcrtcaaca
>THE1D   Long terminal repeat (THE1D subfamily) - a consensus.
tgatatggtttggctgtgtccccacccaaaatctcatctcgaattgtaatccccgtaatccccgcgtgtc
gagggagrgaccaggtggaggtgattggatcatgggggyggtttcccccatgctgttctcgtgatagtga
gtgagttctcacgagatctgatggttttataagtgtctggcaggtttcccctgcwctcacacntctctct
cctgccgccttgtgaagaaggtgcttgcttcccctttgccttctgccatgattgtaagtttcctgaggcc
tccccagccatgtggaactgtgagtcaattaaacctctttcctttataaattacccagtctcaggtattt
ctttatagcagtgtgaaaatggactaataca
>LTR5B   LTR from human endogenous retrovirus 5' LTR, clone HERV-K18.
tgtagggaaaagaaagagagatcagactgttactgtgtctatgtagaaagggaagacataagaaactcca
ttttgacctgtaccctgaacaattgcctttgccctgagatgctgttaatctgtaactttggccccaacct
tgagctcacaaaaacatgtgttgtatggaatcaaggtttaagggatctagggctgtgcaggatgtgcctt
gttaacaaaatgtttacaggcagtatgcttggtaaaagtcatcgccattctccagtctcgataaaccagg
ggcacaatgcactgcggaaagccgcagggacctctgccctggaaagccaggtattgtccaaggtttctcc
ccatgtgatagtctgaaatatggcctcgtgggatgggaaagacctgaccgtccacccagcccgacacccg
tgaagggtctgtgctgaggaggattagtaaaagaggaaggcctcttgcagttgagatagaaggaaggcct
ctgtctcctgcctgcccctgggaactgaatgtctcagtataaaacccgattgtacatttgttcaattctg
agataggagaaaaaccgccctgtggcgggaggcgagacatgttggcagcaatgctgctttgttattcttt
actccactgagatgtttgggtggagagaarcataaatctggcctacgtgcacatccaggcatagtacctt
cccttgaacttatttgtgacacagattcctttgctcacatgttttcttgctgaccttctccccactatca
ccctgctctcctaccgcattcctcttgctgagatagtgaaaataataatcaataaatactgagggaactc
agagaccggtgccggtgcaggtcctccgtatgctgagcgccggtcccctgggcccactgttctttctcta
tactttgtctctgtgtcttatttcttttctcagtctctcgtcccacctgacgagaaatacccacaggtgt
ggaggggcaggccaccccttca
>MER46   transposon - a consensus.
caggttgagtatcccttatccaaaatgcttgggaccagaagtgtttcggatttcggatttttggattttg
gaatatttgcattatacttaccggttgagcatcccaaatctgaaaatccgaaatccaaaacgctccaatg
agcatttcctttgagcgtcatgtcggcgctcaaaaagtttcggattttggagcatttcggatttcggatt
ttcggatttgggatgctcaacctg
>CHARLIE4   Autonomous DNA transposon CHARLIE4.
caggggttcttaacctggagtctatggatagaattcagggggtccgtgaacttggatggggaaaaaantt
acatctttattttcactaacctctaactgaaatttagcatttccttcaattatgaatgtaggcaacaaac
cacagtagtattagcagtacctgtgactttgtcaccaatagaaatcacagatattttcatatcacattac
agttgttgcagatatctcaaaatatcatttatgctcatcactacttcgaaattacggtagttattagacc
cgccgctagattgctcactatttctccttgcacagtattacaaaggttatagcacagctatctgcactgg
aagagatcaacatggtttgtgaacagtgaaaaaaacttagaagtagttttttactcaaatgctgtgatat
gtttttgaaggagttcatcaaggaatgggcatcctcaacattcactttcactatgtaactagataaaaca
atagacacctctcaatgtaaccaacagcttgtttttgttcacaatgggcatactgacacctttaaaaaga
gaaattgcattttttgagtggtcccttttggatattgcaagggctgatgatgtttagaaacggtaaaaag
ttattttgccgaataaatatttgactaagaaaaaaaatcgtcatactctttgcacagatggagcttctac
aatgactggcaatacatctgcttttgctacttcagtgaaaaaaaatcatcttatgtcattgtcacatgct
gctttttacagagacatgcactggcaacaaaagcttttgcaacaaacctgaaaggagttttgtcaagagc
cataaatgttatcaataaaatcagatgtagatctctgagtcaccttatttaaatttttaaaaagtaataa
tatattcatctctaccatatggaaattcaatggctttcaagacaagccttgctgttctggctcaaattac
atgcagaaattttacctttttggaaaaaaaattactcttggatcactttggaagaatgcattttatctat
tggttgatttacctgacaggtatttttaaccaaatgaatgagataaatcattaaaaattctgaagtcacc
atatggacgcttctgaaaattttcaagctttcttgactaagctgccaaaaacgaaatgtagagtcagaag
tacttgtgaacttcacattctgagggaaatattttaacataattgaaaggttttatataatgttccatca
atttatttgaaaagagaagtttacaaagactagaaacacatcagaacgttttcaaaaggtatttctgcat
tgatagcactatagatgaatcatagattcgcaatcctttcttctgatataaactgtgtgaaagatgttga
actagccaaagaggaacccattgatgttagaaagaactttttacaattagaattttactcaagaagccct
ggacaatcctaatgttcattgtgacaaaccagtccttgcattctaaagggatatatgaaagctttaattt
catgttcaataatatatctttgcagatagatattttctgctcttgtaaccatcaaaataaaaattaaaat
taaaatcaattagatgttcatcataaagtatgtgactccacatgttaatggtcttattcaagctaagcag
catctactatcacaggaaaatgttaaaaaataatcttaactcacttgtatttaatatatattatcttgtt
atttaatgcattaataaagaagcacatatattactatatcacaaatttggttttttaatattttgataac
tgtatttcaatataattggtttcctttgtaatcctatgtattttattttatgcatttaaaaacattattc
tgagaaggggtccataggcttcaccagactgccaaaggggcccatggcacaaaaaaggttaagaacccct
g
>CHARLIE9   Autonomous DNA transposon CHARLIE9.
cagtggctttcaaacttttttgaccgcgacccacagtaagaaatacattttacattgcgacccagtacac
acatacacatatagacacacagaaatagtncctccccanaaatgaattaaagttttgtagaacanttgat
tttattaaatataacaaaaactaaaacataacataaagtatcacatattgttttattancatttaaatgt
aacatagaaaaatactncaaaataagaaatacaaaaacaaaaactaggnaagattttatttantgtgatg
ggtgtgcttgcctgttcataagttcattccagtccggaacacacgaggacaatgctacccacatagctgg
tgcaccgttnagcccgtttctttcctttgtttttaactgggttaaggttgaaaaccctagttcacacaaa
taggtcgttgtgaatggtantaatagcgatacactctttctacttagcaatggaaantcttctttaacct
taatccaaaatgntgataaacttaangtctcataatcattcttcagtgtatatgaagaactaagctgcaa
taattcattctcttcttcgggcaccaagtttaactcaattattgattcagggtttcgaaaagcaaatgga
tcttttatccaacttttcccttaatgtttcaaatttctcttctggaaagtaatggttaaaagtttgagac
agagaagtgagatgcaacaatatctctaattttatttcnttcaaaatgtcttcattaataatattctctt
caatatgttgcaanaatgttgggaacatatagtagctagggtgattacttttaagtcttgcttgccataa
caataatgtcttttggaatccttggatacgttnaacatgttgaaatacatcgttgtttttcccctgtagt
ttcaaattcagttttaagaatgccgaaaatatcagttaaatatgccaattttattactcaaatatcatct
tcgaaaatatttgccaaatgagattgcttttcaattagaaaaatgtgaatctcgttcctgagttcataca
ccctgcttagtattttcccttngacaaccaacgaatttcagtatggtanagtaagtgggtatggttagct
ccaatctctgaacaaaatatttcaaaaagttggctattcagtgagcttcctttaatanaattaacaactt
tcactgcgtttttcaatattccatgagattcagcggaatttctttggatnccaaagcttcgcgatatata
aaacagtgattccaaacagcactgttattagtagcttctaacaatnttttaatnactctnttatgttttc
cagtcatatttgctgctccatcactcgtaattcctttacagtttttccagtttaatttatgttgatcaac
aatgcncttttccaattctgtaaatatatctaatccagttgtgtgtgaggttaaatttaaacaacacaac
aaatcctccataaaatcatcttgccacgcatatctgacataaactaaaagtgttgcgcaacttgcaatat
cagtgctctcatcaagttggatcgcaaaatctataccggactgtaaccgcgtaataagcattgcttctaa
acgttctgcagtagtanagatttgangagatactgtgttatcactaggtatagtttttaatttatcagct
gatttatcatcaaaatcatacgcaccatatccatacatgctagaagaataattttttcagcagctgtgtg
agccattttctcttttgccacatgatatgcaactaaatatgatgataataaggctttctcactaacagtn
gtngaacgactaagaaattgtgccgataactttatgtcttttttctttctttgaaaatattcgagaggct
tattaacaagttcagcatgctgtgtttccaagtatctttttaattttgaaggttttaagctttcatttgc
aagaatatcattacaaataatacattggggtctgtcattttcattgggttttgcacatttgataaaacca
tattttaaataatcttcattataaagtcttgcacttacttttttctttttagaatgtggctcaaataaag
tcaaagtttgctgattagagtcaacatttttctcaatattgtcactatttacacttccagatccagcagt
tgaacttgaacatgcctctgtatttttcacttcaccgttcttntttcttctaataataaagcgacccatt
ttaagggcaatttgtactagtttaattaaaatgttacaattgtcacaaactcaaaaatatcncactnaat
aacgtcctttctgaaaaatacactgaaagttcctaactgaaactcggttgaaagtctngcnnactgcaga
taaaattctcaccctcacttcacaactaactgcaaattatgttaacataaaattaaactgtacagcgtta
accctcccgttacaatnatgatcaaattgaccatcatataccagaagacnccaatgagcagacgaccaaa
tgacanttcctggccaatncatgtattcattanntctcnttctccaactgccactcatntcaattggccg
cggcattcgttgcaacgtgcacagttcatgctaaggatccgtgcgatgcactctgatattttctattcta
ttctatttcattttacttttaaaaatgctggtcgcgacccactaaattgatttcacgacccactaatggg
tcacaacctgcagtttgaaaaacactg
>TIGGER8   Mammalian DNA transposon fossil - consensus.
caggtggtcctcaacttttgtacgtttnactttcananaacccgcacttttgtacattatacattgacac
ccctaaaccgcctttcntatgccgaattcggacttncgtacatcagctgatnaacgaacatttngagcta
tcncacggtggtgctgcctgccagccaacagttcagtttcggcagcatcgccatctttgtctgtacagca
gtgtttgtgcaattatttgaatattttattgcattttgcccttattattttataaaaatgagtggaaaat
agaaaaatgaaagtgctgatactagtgataagaagcgtaggtctcataaacttaatacaattgagacaaa
gatggaaatcattaggcatgctgaaagcggcgaatctttagcctcaatcggacgctcactggacttaagc
cagtcgactgtgtgttcaattgtgaaggaaaagaacaaaattaaagaacatgtacgaaatgctggaaata
tatcatcgaagactgtgtctaaaaggtgaagtgtaattagggattttatactattttttagctctctggg
aanaaatccntccctacaacactnnangtcnattgtttgactttcacacattcgacttccatacacgttt
tcaggaatntattangtatgaaantgggggactggc
>MER5A1   a consensus.
tgctactcaaagtgtggtccacggaccagcagcatcagcatcacctgggagcttgttagaaatgcagaat
ctcgggccccaccccagacctactgaatcagaatctgcgttttaacaagatccccaggtgattcatatgc
acgttaaagtttgagaagca
>KANGA2_A   Primate KANGA2 repetitive element - a consensus.
ccatatatgcccgaatataaggcaaggntttnttttccccaaaattatccctcagaaaagagggagtcgc
cttatattcgagtccttacaaagtctctcatattacggggcactctctcaattactttattttgaacaac
aaagtactgtttggggaagacacattagcctgaaatgacctcaatcaatgctagttttggatgcttatag
aggtcacctgacggaatcggtnaaaaaggaggcaaagaaatttaacacagatttagtaattattcctggg
gntatgacctcacaattgcaagtgttggatgtcgttgtaaacaagccttttaaagatcactttaaaaagc
aatacagtaagtggttacattgtggagatcacgaatatacacctacaggacaaatgaaaaaaacaactgt
cctaatgttatgcgaatgggtacttgtggcttgggataaaatttccagtgacagcatcatacacggattc
aaaaagtgctgtatctcaaacaacttagatggaagtgaagatgatgtgctctggaaaactgtgttagatg
actcaaaaagtggctctagtgatgacgaagacactgatgtcaaagatgcatgtgaagagtttgaataaaa
ttgtttcatgaaatgtgagaatggaaaaagcaatatttctaaattaatatattattttataatatgtgat
tttaaatatgtatgtgtaactaaattaataaattaaacattataagtagacatttgactatttcatctat
atccctaaaagtttatatattcaagttggccanaaaacttttnttgaatcttctcattgggaaaattggg
agatcaccttatatttggngttaccttatatttgggcatatatgg
>FORDPREFECT   Primate FORDPREFECT repetitive element - a consensus.
cagtaccgcccttagacccgggcaagcggggcccctgccccgggccccgtgcctcaggggaccccgtgct
ttggagtgccttcctcgaaattttctaagtccccctccggtgcctgggaccggccggggccggcagtgcc
atccgggcagggcgccccgagcccggaccgggacccgcgtgggccctggtccccgtttctccccttcggg
gtactctccgaccctctaccccatgtgtggggtcgaccagatgccccgaggagctccgggactcatgcct
atggggtcgtcccggggccccgtggccgggccccggttccaggagggcggcctggcgagcagatcgctcc
cgctggccggcgcggtatttctttcgcgggatcgcatgagattgggccgccagaatggtgctgacacgct
gatttggggtgactctcactcacgtcggacacaggacaagttcagggctctgggctaccgacggtccacc
gccgacccttgggcttgagccgcatgtgtgggcccatgcgtcggctctcacccatctgtgttctgaccat
ggtgccgcctctggtctacagcacccgagggtggtggaggtggcggcaggcatcctttaccctgtgcgcc
tcccaccgctggcacccagggcggtcaccccaccccctctncaggctccgcgccacgtgtcaggcagtcc
tccggaggtggccgcgcctatctcctccgagggctttcgagaccgttgctccgcaacgccaacgggccct
tccgatcgatgtcctctcttgcctccgatcgatgtggtgatgtcgtgctctcctgggttggtcttaagcc
atgccggacgagggacggacattccttgcacgaatgggaccgctcttctcgctctgcccatgggcccctc
gcctatcctccccgctgtggtggtgtgtggaaggcaggggtgcggtcaacattgaaagagatcacattct
aggaatgcagtgattacggcctaaagagttcaagagaagacatggttggaagatgtgttgttctacgttt
atgctataaaattccaaacggtaaatttaacatgaccagaaaacgaattatcgttcacattttcctgcat
actctgggtaagacttgcatttgtggtcatcatcaacgaagcacagtaacaacctttgagagagtcactg
gaagccagtattcacgggcggcacgatggatgatgcagcgtcatgagtaatgatgtaaccagcattaaat
aaatggtattagggaactgcagaggcaagaagatctatattgtttcaatacaaacaggttccgaagagcc
atggcattgtgagtaataacagcgttgctacctttttctcgtggtgggagatatgaaattagccaggaac
ggcgcatttgacaataaagaacacgaagagatggttcctggacctgaacaggaagagatggtgcctggac
actatgaagaatcttcacgtgcactgattggacaataaacaaatacgtaagtacctcttctctacccatt
attctaaatcttcatcgataaatcactatacctcacatgggcccatgaattttgtaatacatttttaatc
aaattgtttatatagacaggggccccgcaaaaaatatttgcccagggccccgcacaccctaggggcggcc
ctg
>FORDPREFECT_A   Primate FORDPREFECT_A repetitive element - a consensus.
cagggccgcccctagggtgtgcggggccctgggcaaatattttttgcggggcccctgtctatataaacaa
tttgagtcacccnaaatcagcatgtcagcaccattctggcggcccaatctcatgcgatcccgcgaaagaa
ataccgcgccggccagcgggagcgatctgctcgccaggccgccctcctggaaccggggcccggccacggg
gccccgggacgaccccataggcatgagtcccggagctcctcggggcatctggtcgaccccacacatgggg
tagagggtcggagagtaccccgaaggggagaaacggggaccagggcccacgcgggtcccggtccgggctc
ggggcgccctgcccggatggcactgccggccccggccggtcccaggcaccggagggggacttagaaaatt
tcgaggaaggcactccaaagcacggggtcccctgaggcacggggcccggggcaggggccccgcttgcccg
ggtctaagggcggtactg
>LTR16E   Primate LTR16E repetitive element - a consensus.
tgtatcggacacaaatcttatgcgcctcctcagattcccttggcctcatccgcctcccggaccctcagcc
gcttgctctgcctcagccgccgccatagctgaccaactccnnncgggcccacgcggttctgccgcctgag
gccgaccagccacacgcccagagtctctggctcctcccgccacttccagacttggatgaaacgccacacc
gcagggcatgggatctggcttcccgagcggctgccaaaggggccggatgacgcaacccggaagtgcaggg
gagttaactccccgtggggtgaactttgaccaatgggaaacaggagacaggagggagccgggcagataaa
ttcctcctcctttctcccttccatggactgctccgaggcgcggtttctccttgcagccctgtccggagaa
gtccccgtgtgccgagcggacgcacctgccgagcgacctgctgtgtctcttcgcggctcgtcgtgaagca
gtggccagcgcggtaacgcatcaccttgcattgcttcccatccttccctgcctcacttcccttttctctc
actctcactgccctgggcttgcacctcccaaataaagcgtcagcactttaatccttgcctcaggctctgc
tttctagggaacccgggctaagaca
>L1PA17_5   Primate L1PA17_5 repetitive element - a consensus.
tttttttttcaagatggctgactagggacgtcggatgccagttctcctcagaaagaagatcaaagttaca
ggtgaatggtcatgatccgaatggaaaactgagggaagagagccaggacctgtcggagagcccacgggaa
gaagctggggtgcagaaaaggaaagcagcaagagtctggcagagattgacccccgaggaactcggagccc
cgcggaaagggtaggtgggggtgcttctctgctcccctcacccctgcgacaawctgctgaccgccaaact
gttggggagcccctctgccctcgcgaccccgggcaatgctgtcggtggcgatttgggaacttcctgggga
cagagmaccgggtggccagctcgcgcaggtgtgcccgcactcccctcagacccgaactgagatggcgggc
gccatactggttgtgcacccgttgtgggccactgccctgcccagggaacctcngcccttgagtcaccgca
tcaccagatcccccgcaaacataccccacaacccgctctgactttggcaancacaggggaccagcgggtc
cccggggagctgcgggacccctggagatctagccctcggcgcgggccgcccctaagggaggggggagcgc
agcccgccaaagccccccttgggacaaaggaaacgcgggcgcggcgccaatcgctgaagggggcagcacc
agcggccgggaatagacgtggagagggggtcatctcccgctccccccgtccactgttgcggacgcagcag
nggctctccccgctgggggccggcgcgngtgcacttggagaaagcgctttccagtgcttttcgcggtggc
tncacccccgctgaaagtgagcccgtgccgcttgggcttgcacaaagggcggggcccanctccccctccc
tacacagagtggcagcgtcccggcaacggaggacagacaagccacagagctgtctgctctggactggggg
aagaggctctgccccgagcccattttggtggtagccgccagaggggcattttccgcggccctcagccaca
ctgcggccnggagccaaaggacaatgtctntatgaactgaaggtcgtgagccctgcgacaggggcatgat
agggaagcggatcgcgttcctgcctgcccaggacgaggagctggtgcagccccctcaccccctccccnga
gacctcagcgcaccccaacacgatctccccccaccacccccatcagggcaggtgcctccactcgtcatca
gcctacccgagggcgagccggctcttactcttaagcgccacctactggactggagactgaactgcaccac
caaataaaaaacctgctgncagaagggcatagtgctagtgcatgagataagcttcctgagacctccgcac
tctcagccccgcaggagatagtgtgtcggctcatacgcccaatacatcgctacaacaagcagcatctgag
aaagccaccgcacaaaagctatccacaaccaaggaacccatacagagccttggccccctgaaagcaccca
gaaacgaagccaaacgatcatacacaacatacaccacagtcataccctcaagggaaaaaagaataaaaaa
ttaaaaagtcccatccaaacgatagcaaattcaaaaataagaagcgacagctccctcagatgagaaggaa
tcagcgcaagaactccggcagtacaaaaagncagagtgtttcgacacctccaaa
>CHARLIE10   Primate Charlie10  repetitive element - a consensus.
cagtgctactcaaagtgtggtccgtggaccggtgccagtctgcgaactgtttgttaccggtccatgatga
gataagtacagaaattgagagtaagcgtttagaaacttttatagcaatttgacattgccgcgacatccaa
gcacatgatcagtggactcatctcattgaacagggtatagaccagtttgggtgttgtcgaactcgcgtgg
tgagtcacatgtggcgcnagctgcgtactagtcatgcgcagtaggaccacattacaacgtgtgatatttt
aaggttagtttgtcaactgtaacccaaaagtatataaaaatctgagaaaatataagcatttatttatttt
tataacttatttatttttataattantttaanttttaatcaagcctagtttttaatttatggtttaacat
tattagctaaattagggaagtaaaatttgtattatttatttttaaccctaatttacagatggcgaaacaa
gcttcactggacttttttgtcaagaaaagacacgccttttctgaatgcagcagtagtagtaaaccaaatg
atgacgatggaagtgattctgaagaaangaaaaccaaaagagtttgtactagttttactcggaagtatga
tccctcatatactgagttcggttttgtagccataattgatggngaagtgctaaaaccacagtgtgttatt
tgcggagatgtactggctaatgaagcaatgaaaccatcaaaacttaagcggcatttacatacaaaacata
aagaaataagttcaaaaccaaaagaattctttgaaagaaagagtantgaattaaaaagccgacagaagca
gatgttcaatatttcacatataaacattagtgctttgcgggcttcttataaagcagcacttcgggttgct
aagactaaaacaccatacacaattgccgagacattagtaaaagactgcatcaaagatgtttgcttggaaa
tgttgggtgaatctgcggcaaagaaggtagctcaagtaccactttccaatgacaccatagctcgatgtat
tcaggaactggctaatgatatggaagaccaactcatagaacaaataaagctagcaaagtatttttcattg
caacttgacgaatgcacagatattgctaacatggcaattcttttagtatatgtgcgatttgaacatgatg
gtaatatgaaggaagaattctttttttcagcttcattgccgacaaacacaactagctctgaactgtataa
aactatgaaggattacattgtcaacaaatgtggtttggagtttaagttttgtgtaggagtatgttctgat
ggcacagctgcaatgacaggaaaacattctggagtagttacccagattaaggagcttgcnccagaatgta
aaccaacgcactgcttccttcatcgagaaagtcttgctacgaaaaaaatatcagctgaactaaacagtgt
gcttagtgacatagtaaaaattgtgaattacgtaaaggctaatgcgttaaatttgagattattctcttta
ttatgtgataatatggaagctgatcataaacaactgttattgcatgctgaggtacgatggttatcgaggg
gaaaagttctgtcgagaatgtttgaactacgaaacaaactcttagtgtttctgcaagataagaaaccagt
ttggtcccaactttttaaagatgtgaattggacagccagacttgcttatttgtctgatatcttcggtatt
tttaatgatcttaatacttccatgcaaggaaagaatgcaacatgtttttcaatggcagataagatcgaag
ggcaaaaacaaaagttagaagcttggaagaacagagtttctacagattgttatgacatgtttcataattt
aacaacaattatcaatgaagtaggtgatgatcttgatattgcacatctgcaaaaagttatcaccgaacan
cttanaaatttgatagaacgttttgaattttattttccatcaaaagaagatccacacataggaaattcat
ggatccggaatccatttctttcattaaaagataatttaaatttaactataactttacaggataaattgtt
ggaactggctactgatgaaggattgaagatgaattttgaaaatacagcatcacttgcttcattttggata
aaagttaaaaatgaatatcctgagcttgctgaaattgctttaaaatctcttcttccattcccatcaacat
acctctgtgagactggtttctctactatgaatgttattaaaacaaaacatagaaacagtttagatataca
ttatcccctgcaagtagcgctgtcatcaatccaacctagattagataagttaacaagcaagaagcaagct
catttgtcacattaaaaactttaaatattgatatacatggtgttcgttcaaagtgtgcatataggcattt
aatatggagaatcgctatttcacttcataactttttgtttagttataattgcagaacnacaaaaaattat
gagtgtaacagnaattttctatattaattgcctatatgcacactttcaatgaacaatgtgtacagttttt
ataattctntttttcctcatatttgttgtatttattaaaatataattttatgtctgttgaatctaataat
aaaaaattttgggcttgtattttgtatgtcttttttttttaaatttcatttttctagtaattcattttta
ttgtattttacaaaagtattagtctgtgatagattggaaattaaaaaaaaaaaaaaactggtccttcacc
acagatagtttgagaagcactg
