>MER79   Primate MER79 repetitive element - a consensus.
tgrtcttsktggataccactggaggaggtgttggngcgcctcgttacagcttcatgagggtggaaatcta
ggctccccactcggcctttncaggtgtgggtgggagtagggccacagtttttctgtggtgtttggctaga
gtagagcggttattgtctaaaagttttctgtcttgctaggctgcccctttcytggtcctttggntagaga
gagcaggcttttttggggctttctttgtctgtacccattggcgtttccgggttgccggcttcttcggttc
caagtctgggatatatgaggcaaaaagaaaacccaggaactcactaccgtgtcattccttgggtcccgag
gtccctagccggtctgccttctctccacctttcggagtcttcttatgcttgttttacatataatgctcag
ggtttttagttgtacttagtgggaggaatagggaagagtacatctactccatcttcctggaagcagaagt
ctcccgctttgtttttaa
>L1MD1_2_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
aaaaagcggagacttccgcttccaggaagatggagtagacatacttttccctattcctcccgctaagtac
aactaaaaaccctggacattatatataaaacaaacataagaagactccgaaaggtggagaagaggcagac
cggctagggacctcgggacccaaggaatgacacggtagtgagttccctgggttttctttttgcctcatat
atcccagacttggagctgaagaagccggcaacccggaaacgccaacaggcacagacaaaaaaagccccaa
caaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaacttttagaca
ataaccgctctactccagccaaacaccacagaaaaaactgtggccccacycccacccacaccagcaaagg
ccgagtggggagcctagacttccaccctcgccaggctgtaacgaggcgccccaacacctccaccgggatg
gtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggcccmccttccc
cttgccmctgcggtgtcagtggaggccacgtgggaagtctggacttccaccsccacccagcagtaatgag
gcattcctmcccctctccgctagggtggtgtcagaggaggcctagtggagagtcaggactttcgccaccg
cccagtggtaatgaggccaccacccangaaggtgtcagtrgagacctaatggggagccggaactcccacc
cccgcccagcagtaacgaggagccyctccccacctcaggtgtcarcggaggccgagtggggaacctggac
ttctacccccacctggcagtaatgaggcagtaccctcccttcccctgctggagcggtgtcagaggaagcc
ggctaaaacagaagatttaaataagatccggagtctcataacataatacccaaaatgtccaggtttcaat
cgaaaatcacttgtcataccaggaaccaggaaccaggaaaatctcaaactgaatgagaaaagacaatcaa
tagacgccaacaccgagatgacacagatgttagaattatctgacaaagattttaaagcagccatcataaa
aaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaagaaata
gaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaaatacaa
taaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaaccagtga
acttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaaaaaatg
gacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtcccagagga
gaggaaaaag
>MER4C   a consensus.
gttrgngttrgngattgcnnntgtgaaaggaaaataaaaacttgggacccnaattcactntgccaaaagg
aaaaaattaagctgaaanctgagtcatgcaagaaactgcctttccttttnttcctaagcagatanctaca
gataaaaggttaaatatctccacagrcagtgactctatgttcaccttycytatgtaaagtgkcgatttac
tgagcacgmkakgratagataattgactattcccctacctgctccttttctcttgcaacatgtggattac
cayamcctyyytctttcccctccagcctacytttcccntttaaatattgaagccctcaaantcatcnctg
gagaaaggcacagaccacagamtstttytgtraytycgtgtttctcctnggcatgtccttaacnttggca
aaataaactnctaaatcgattgagacctgtytcagayacwtttkggtttaca
>LTR9   LTR from human endogenous retrovirus-like sequence (HUERS-P3).
tgaraanaaactgatataggagttaagaagaaatcacttaggcagatagcaagggtatgggagtcctcag
taaggcttttctttttaatgaaaagcagccccaaatcattttctaacaaagagcagcctgtaaagttgag
ctgcagacgyagacaagcaagctggnagcttgcacgggtgaatgctggcaggaactagggactagacatg
ttcaagatggcggctccatcttcccttctctgccagccacgtgtacagtaaggagcagacaagatggcgc
tggccaaggggaaagttcatttgcataataagattagggtggrgagrccagccttccccgcgcgctatgt
aaacgtcatacctgatcaaaccaatctrtgagccctacgtaaatcagacaccacctcctcaarccggact
ataaaatccggcacatccgccaccagctggtcttttycnctcggaagacccctctctctagagagagagc
tgtttttctttttcttttcttctgcctattaaacctccgctcctaaactcctcatgtgtgtycgtgtcct
aaattttcctggcacgagacgacgaaccccggtgtatayataccccagacaatgtagccacttcataang
gggrctcgtctrggat
>MER67A   Primate MER67A repetitive element - a consensus.
tgctgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcct
caaccttggcctataaagacttgaacaaacactagcatagcttctaacagctcaaggccgcgtccctagg
atgaccctagcccccccttaaagtgcctgcctgagaaagctcaaggctgccagaagaatttactgtttgt
tccagccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaactttgat
aagcgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcactt
ccctgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtc
acctctgcacaaatccaagctgagctcagttcacactggactcttttccctactgcaatagtatgttact
gattaaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67B   Primate MER67B repetitive element - a consensus.
tgccaagtgagaaccgcagaactctcggcacagaacaactccgtttaaacccctgcactaagagacttga
ccaaactctagcatagcttctagcagcacaaggccgcgtccctaggatgaccccagcccccccttaaagt
gcctgcctgagaaagctcaaggctgccaggagaatttactgtttgttctagccaacacctgatgataggc
ccctgatctccctttcttagagcatttactaaaaagggcttataattgtgaatccttcctctgtcccttt
gagatatgtatgtatctcctacaactcaggagtgtctttctcaaggacctgagagccatccctttgaaat
gtaatcatcaagaaggatagggcctctgtctcccagtctctgtgggaggatagaatcctaactttgataa
gcgccagttagcagacacagctgggctaatcacattkacactgwccaatcttttgtaatttttcacttcc
ctgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcac
ctctgcacaaatccgaacggaactcagccctttcccctactgccagtagttactgaataaaatccgtttt
caccgctttaactagtgtccggctttgtttatctttgaca
>MER67C   Primate MER67B repetitive element - a consensus.
tttaaaggtaaatacaaattaaaaataagaggattgaattntccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgag
atgtatgtaaatctttttaaaagctaaataaacctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaatcatcaagaaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaactttagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
acgagaaattttattttcctttggataaaggcaattagctaacacaggtggccaccccaattaccaggta
aatttaggatgaactgtgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtctt
tgtaatctctttagcagattgtctgtgatgcgcatcacattctggtttaatgcttattcagtaataaaac
ntgttttctttctcttctacctttgtgagaaggtttttctgggttggtaggagattttgtttttaatttt
cccaacaanattcawaacaga
>MER69B   Primate MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgagccccttc
caaggccctgggagnagccctagcaatgtgttcacatggtcatatgtttttgtaaaayttgcaaaagtaa
gatattttaaccacaattggttaagactgctgtcyctttccattccgacttcccctccatcacacttccy
cycatgtcgggtggyattggagtggccacgggcattttagggatctagctaagggaaagttgagttgggg
atatattyagtttgggatatattwgtgggatatatttacgtggttcmcagtcacttccgtgtatagttat
gttattgctagccaycccggtataggaatggcttccaggaaaacacactgctgcccactgtgctgactca
yccagcgtcgtgaccagaggcacgggaccggaggtcgtattgtgatatgaacgtgncctgcagtacctgg
caccggaagtatgcgggtagtggaggagaaacgaggtttgaaatgtacagagccaaaagccagtctgtgg
aaaattcttccagtcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgacacctagccag
agcaraagtsctctcttgtcagaaatatactcggcaatgcagcgtatacaattataaatgcamcatgcat
ttatttgcacttttggaagggaatcgtgtgaaatagaatttatcagaactccttgtttgtagggcacgaa
cctgtagctagtactacaaacaktgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgct
gatatgacatgaaatwctgacgttaacgaagataacasttcacttctaatwtwccaccgcaaaaaagwca
tcagtgacaaactggttactgagtgtcattaattctangagcayttaagattagtcactggacgagaaan
cttgaaatgccctgaaatcttacagctcatatatgaaagaaacttggtaggggtttccccaaatttgaca
acaatcctaaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaattttctaaactatc
aataataaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctata
gaaaatawtacaaaattattgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaa
aartattatagaagtgtrtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatg
tttgtggtatttgtcaacttttwaaaatktgtaatttgttgyaatttcttttctcattctaaataaatat
tcacttttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgta
taagcttcaggccccacaaaacctggatctgcccctgg
>MER73   Primate MER73 repetitive element - a consensus.
ctgttgtgrttyttatcgytatgrtattytttctaatttggtctcgaggtctctctcttgagagtggcca
tagccaagatagccattctctaggagatccctgacccaggrraagttarrttcgartgtgttkgtcaggt
gagacacagtggagcagcacaacaaaacgcatgaaacagaagaaatttattacttacagatcccagagag
gttagaggtgctgatgggaggcggaagggaagtctggaggcggcagggagctcatcgytgggwagggagg
gagggggcagctgcgggagnncgcctttattaaggtctgtggataytatccctcaggctttcctacgggg
gttgtggatcggctggtttaaagaaaacatgycagaaggaggaaacttatttacatgactctggtgttga
ncattaggttttatcatggtcagcagctgtggggtgtgttgggttttgggtcagcgagatgagaaacaag
trggcyatatcgcaaacaaccacatgggagggagaagttttaactagggcaaaggtgacggggtacgact
gggtttcaaacaacttattgtcaggcctaaaaatggatgccgaggcagyaaccgtattaaacgmatttat
gaca
>MER75   Primate MER75 repetitive element - a consensus.
tttaaccytyttyccgtttgccctgagaatactcgccggtggtgcttgcggctgcagcgtttaccccaag
ataactttgccatgaaatatnttgcttttattattttcacatcattctagtatatcgactttggaaacaa
aagacatcgytctatttakagcattccttttttagtagcggtatttccatttacaaaatatagtaaytct
cgattgctgaaaatgtcaaatcctagaaaacgtagcatkcctatacatgatgttaacatcgttctcgaac
agttgttggccgaagattcatytgatgaatctgayttttccgaaatagacgattctgatgttagttctgt
ttagaaataactccaagaacagtttttatattttattttcacattgaaaatcagtcagatttgcttcagc
ctcaaagagcgtgtttatgtaaaattaaatgagcgctggcagcgagctgcacttttttttttctaaacgg
gaaaagggttaaa
>MER76   Primate MER76 repetitive element - a consensus.
tgaggagtcccgctcctggyyaaaaacctacgtrtgatttttcaggcctgaccataggcaattacaaagg
ctttacctggcagrcctcatgggggaaagctgccctccccacgccagacttggtgcacagccartgcatt
gcagtctctgaagggagttgcagtcaaggactcangccccctggccggccacgctcttgcgcatatctgc
attcctagcccaggcacctccgttcggaggtctctttattnggrgncttctgtaraggkcttcctcaggt
gcctswgycaagayctctttwtgaggggtggaagcgggarccttgaagacatttntctccactctgrctc
agtactcagtgmttttccactcytntcctgggtccataaaactgcatgaccctttwgytcagggctccct
caacagtgagacgacccccatgtstgtrcymatccaactaacacttgaccagtgccatttccacagggaa
aaacagaacagggggrgymrgtagcatttctctggctttagactcttgcttacactattgaaggacttga
cctttaatttgagtaactttcctttggggcttgttgctttaatcggctc
>MER80   MER80 repetitive element - a consensus.
ctagacagggnttcttaaacttttttgtgccatgggcccccttggcagtctggtgaagcctmtggacccc
ttctcagaataatgtttttaaatgcataaaataaaatatataggattacaaaggaaaccgattatattga
aatacagttatcaaaatattaaaaaaccaaatttgtaatatagtaatatgtgtgcttctttattaacgca
ttaaataataagacctagcagtgggtctaattattaccataatttcgaagtggtgatgaacataaatggt
attttgagatatctgcaacaactataatgtgatatgaaaatatctgtgatttctattggtgacagagtca
caggtactgctcataccgctgtggttggttgcttatattcataatggaaggaaatgctaaatttcagtta
gaggttggtgaaaataaagatgtcacttttttccccatccgagttcacagancccctgaattctatccac
ggactccttggggttccatggactccaggttaagaatccctgtctag
>MER54   Primate MER54 repetitive element - a consensus.
tatattttcttctaatttggtcttgaggtctctctctggagagtggctataaactctagccctgccctga
trgggctcnagggnatttggtcgtggatgttacagtgcntytctcanggatacttctttatcctggcgca
tggcctaatgcctmagtgtctgacnatnaccaggtgtccctctcacaggaaacttgtttannctggnaga
hgccctttggctcttgtctgacctgtgtccaatttattcctaccaagatagccactccctaggagagccc
tgaccggaagaaagntaggtttgggtgygytggtcaggtgagacacagagraggcagcacaacaaaacac
atgaaataacagaagcaktttattactyacaratccacagagangagngtccctgcaaggaaactgcggg
aagtctggagacggcggggagcwcaagaggacagcatgcctcacagggncaataggaagtaggggagctn
tttgggacatgtangttcaaccagcaggtggggargaagagagagagagagagagagacctgtgggccaa
agcctttattggggtccagggyrttacccaagcaggtttccyrtggggagttctaattggtgggtttara
rgragcaggcayragttccatgrrgtcacactgtgactgagaggtggtcactgtggcatacctgcacagt
ccatgtrgggtgtgrgggtcagtggggtgagtcaannaggctgyatgtagctgtccyrtagggaagtggy
cacyrggaggyrgttgtataaggcagatatctggatcgacyrcmttgaggaactgggaggaagaggyrga
gaactggaaaccgcgkcaagggtgactaagccctgcttytggtatgagaaagyyaaacctatattcaraa
tgcatgccgagrcaacataactctataagnatbcactaca
>MER64A   Primate MER64A repetitive element - a consensus.
cagcggttctcaaactttttggtctcaggacccctttatactcttaaaaattattgaggaccccaaagag
cttttgtttatgtgggttatatctattgatatttaccgtattagaaattaaaactgagaaatttttaaaa
tatttattwattcatttwaaaataataaacccattacatgttaacataaataacatttttatgaaaaata
accgtattttccaaaacaaaaaaatttagtgagaagartggcattgttttacatttttgcaaatctcttt
aatgtctggcttaatagaagacagctggattctcatatctgcttctacattcagtctgttgtgacatcac
acaycatgaagcctctggaaaactccactatacactcgtgagagaatgagagtgaaaaaggcaaataaca
tcttagtattattatgaaaatagttttgacctcgcggaccccctgaaagggtctcggggaccctcagggg
tccgcggaccacactttgagaaccgctg
>L1M6_5   5'-end of LINE1 repetitive element, L1M6_5 - a consensus.
aaaaatawraagggagacttctrcttccaggaagatggagtagacatacttttccctattcctcccacta
agtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaaga
aggcagactggctagggacctcaggacctgaggaataacacagtggtgagttccctgggttttctttttg
cctcatatatcccagacttggagctgaagaagctggcaacccrgaaacaccaacaggcacagacaaaaaa
aacccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaactt
ttagacaataactrctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacacca
gcaaaggccaagtggggagcctagactttcaccctcaccaggctgtaacaaggaacccaacccaccacca
ggatggtgtcagagaaggccaagtagggagytgggactttnttgtgaagctgggactttcatccccacca
ggtagtaatgaggatcaccctcccccaacccccctgcggtgtcagtgtgagagrccawgtggggagcctg
gacttccacccccacccagcagtaatgargcatccctcccctccccactggggtggtgtcagaggaggcc
tagtggagagtcaggactttyatcaccgcccagtggtaatgargccacctcctcctcttgcccccatggt
gtcagtggaggccatgtggggarcagtaatgaggcaytcctmyccctcccagccagggaggtatcagtgg
aggcctagtggggagccagaactcccacccccacccagcagtaacaaggagcccctctcccaacayttca
ggtgtcaatggaggccaagtggggaacctggacttctacccccacctggcagtaatgaggcagttmccct
ccttcccctgctagagtggtgtcagaggaagccagctaaaacagaagatttaaataagatccagagtctc
ataacataatacccaaaatgtccaggtttcaatcaaaaattacttgtcatacaaagaaccaggaaaatct
caaaattgaatgagaaaagacaatcaatagataccaacaccaagatgacacagatgttagaattatctga
caaagattttaaagcagccattataaaaatgcttcaaaaagcaattataaacatacttgaaacaaataaa
aaatagcagcaaanaaatagaaagtctcagcaaagaaatagaaaatataaaraagaaccaaatggaaatt
ttagaactgaaaaatacaataactgaaataaaaaaytcaatggatgggctcaacagcagaatggagagaa
cagaagaaaagaatcagtgaacttgaagatagaacaatagaaattacccaatctgaacaacagagagaaa
atagattgraaaaaaaaatgaacagagcctcarggacctgtgggactacaacaaaagatctaacattnat
gtaattggagtcccagaaggagaggagaaagagrrtagtatttgaagaaataatggctgaaaatttccca
aatttggca
>MER11A   a consensus.
aggtgttgcgggaagtcagggaccccgaatgragggaccggctgragccatggcagargaacgtrrattg
tgaagatttcatggacatttatcggttcccaaattaatacttttataatttcttatgcctgtctttactt
taatctcttaatcctgttatcttcgtaagctgaggatgtatgtcacctcaggaccactgtgataattgtg
ttaactgtacaaattgattgtaaaacgtgtgtttgaacaatatgaaatcagtgcaccttgaaaaagaaca
gaataacagcratttttagggaacaagggaagacaaccataaggtctgactgcctgcagggtcgggcaaa
aagagccatatttttcttcttgcagagagcctataaatggacatgcaagtagggaagatatcgctaaatt
cttttcctagcaaggaatattaatattaataccctgggaaaggaatgcattcctggggggaggtctataa
acggccgctctgggaatgtctgtcttatgtggttgagataaggactgagatacgccctggtctcctgcag
taccctcaggcttactagggtggggaaaaactccaccctggtaaatttgtggtcagaccggttctctgct
ctcgaaccctgttttctgttgtttaagatgtttatcaagataatatgtgcaccgctgaacatagaccctt
atcagtagttctgtttttgccctttgccttgtgatctttgttggacccttatcagtggttctgcttttgc
cctttgtcctgttccctcagaagcatgtgatctttgttagacccttattagtagttctgctttttgccct
ttgaagcatgtgatctttgtacccactccctgttcttacaccccctccccttttgaaacccttaataaaa
aacttgctggtttgaggctcaggtgggcatcacagtcctaccgatatgtgatgtcacccccggcggccca
gctgtaaaattcctctctttatactgtctctctttatttctcagccggccgacacttagggaaaatagaa
agaacctacgttgaaatattgggggcgggttcccccgatactaattntctt
>MER11B   a consensus.
tgcaagtagggaagatatcgctaaattcttttcccagcaaggaatattaataattaatagccctgggaaa
agaatgcattcctagggggaggtctctraaatggccgctctgggaatgtctgtcttatgtggttgtagat
aagggatgaaatacgccctggtctcctgcagcacccccaggcttactaggatggtgggaaattccagcct
ggtaaattttagtcagaccggttctctgctctcgaaccctgtctcctgttaagatgttatcaatgataat
gcgtgcccgaaacctcattagcaattttaatttcgcctccatccctgtggtcctgtgatctcgccctgcc
tccatttgccttgtgatattttattgccctgtgaagtatgtgatctctgtgacccacaccctgttcgtac
actccctccccttttaaaatccctaataaaaacttgctggtttgacggctcggggggcatcacggaacct
accgacatgtgatgtctcccccggacgcccagctttaaaatttctctcttttgtactctktccctttatt
tctcagrccggccgacacttagggaaaatagaaaagaacctacgtgaaatattggggctggttcccccga
tactaattntctt
>MER49   Medium reiteration sequence MER49; LTR-like sequence.
ggaaaggagactttatttcttgactaaagggttgacagcctgcaaggtggccatcccgcaggctgggaag
cgcagcctctggccaagaccagagacaggcacttcgggaggaggaggggttggggcaggagctttatgct
gaacgggttggctaaacatacatattcaacaggttacaggaggagctatgaatattcatgaaggtggtcc
tgacgcatgcgtattgaacaaacatgcatgtaacatacgacccatgttcactttggggtggagacttaac
atttaaatgtattacaattaggccctatacgtcaaaaggtcttttcaggacacgaaggcgtgaatgtact
htctgtaaactrgccagaaccagtccatggcccggtggtccycttatcwggagaaagttactgaaatcag
tctcttgtccaatcaaagctgtagttatggctggtggaacaggggytcagttagtcagcgtctggtgtga
gctgcaattgttttaatattgcttatctcaaggccggtgcttgtttagctgttagagaaaaagaaaaacc
ttgtggcagtragaatatagyttaytctttaagtgtaggnatgcgtgacttaacccttgcctggcatggc
cttaggtcctgtttataatttggtatcttattgccacaaarwktcmrttmtrtyagymttaatgaymtmt
attttwacattaaykwtgrtyagttrttktrtctaaayyryaaaagggagrgggtataatgaggcgtrtc
tgacytmscatccymtyayagccwgraactmagtttttaaggtttytctggngtccccttggccaagagg
gggtccgttcagtcggcggggggctaagattttatttttagttkacawtctmmatttkgccaaga
>MER46   transposon - a consensus.
caggttgagtatcccttatccaaaatgcttgggaccagaagtgtttcggatttcggatttttggattttg
gaatatttgcattatacttaccggttgagcatcccaaatctgaaaatccgaaatccaaaacgctccaatg
agcatttcctttgagcgtcatgtcggcgctcaaaaagtttcggattttggagcatttcggatttcggatt
ttcggatttgggatgctcaacctg
>THE1B   a consensus.
tgatatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacgtgtcg
tgggagggacccggtgggaggtaattgaatcatgggggcgggtctttcccgtgctgttctcgtgatagtg
aataagtctcacgagatctgatggttttataaaggggagttyccctgcacangctctcttgcctgccgcc
atgtaagacgtgmctttgctcctccttcgccttcygccatgattgtgaggcctccccagccatgtggaac
tgtgagtccattaaacctctttyctttataaattacccagtctcgggtatgtctttattagcagcatgag
aacggactaataca
>MSTA   a consensus.
tgatatggtttggatctgtgtccccacccaaatctcatgttgaattgtaatccccaatgttggaggtggg
gcctggtgggaggtgattggatcatgggggcggattyctcatgaatggtttagcaccatccccttggtgc
tgtyctcgtgatagtgagtgagttctcatgagatctggtcgtttaaaagtgtgtggcacctcccycctct
ctctcttgctcctgctctcgccatgtgacgtgcctgctcccccttcgccttccgccatgattgnaagctt
cctgaggcytccccagaagccgagcagatgccagcgccatgcttcctgtacagcctgcagaaccgtgagc
caattaaacctcttttctttataaattacccagtctcaggtatttctttatagcaatgtgagaacagact
aataca
>MSTC   a consensus.
tgctacggtttgaatgtttgtcccctccaaaactcatgttgaaacttaatccccaatgtggcagtattga
gagrtggggcctttragaggtgattgggtcatgagggctctgccctcatgaatggattaatggattaacg
tattaatggattaattggttatcacgggagtgggatcggtggctctatcataaaarycattttgnctctc
gnrtgngccccttcttgccctttcacgccttccgccatgttatgacagagcacaaggccctcaccagaaa
ccagatgcagccgccatgatcttggacttcccagcctscagaaccgtgagcaaaataaacctcttttctt
tataaattacccagtctatggtattccgttaaagcagcacgaacggactaagaca
>MLT1A   (MLT1a subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>MLT1B   (MLT1b subfamily) - a consensus.
tgttatgggctgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gactgtatttggagatagggtctttaaagaggtaattaagttaaaatgaggtcattagggtgggccctaa
tccaatatgactggtgtccttataagaagaggaaattwggacacagacacgcacagaggraagrccatgt
gargacacagggagaaggcggccatctrcaagccaaggagagaggcctcagaagaaaccaaccctgccgr
caccttgatctcggacttcyagcctccagaactgtgagaaaataaatttctgttgtttaagccacccagt
ctgtggtactttgttacggcagccctagsaaactaataca
>MLT1C   (MLT1c subfamily) - a consensus.
tgttatgggttgaattgtgtccccccaaaattgatatgttgaagtcctaacccctagtacctcagaatgt
gaccttatttggaaatagggtcwttgcagatgtaattagttaagatgaggtcatactggagtagggtggg
ccctaaatccaatatgactggtgtccttataaraagaggaaatttggacacagacacgcacacggggaga
aggccatgtgaagacggaggcagagattggagtgatgcakctacaagccaaggaacgccaargrytgcca
gcaaaccaccagaagctaggaagaggcaaggaacagattctccctcacagccytcagaggarrccagccc
tgccgacaccttsatctcggacttctggcctccagaactgtgagagaatamatttctgttgtttaagcca
cscagtttgtggtactttgttacggcagcccyaggaaactaataca
>MLT1D   (MLT1d subfamily) - a consensus.
tgtggtaggcwgaataatggctccccaaagatgtccacgtcctaatccccagaacctgtgaatatgttac
cttacatggcaaaagggactttgcagatgtgattaagttaaggatcttgagatggggagattatcctgga
ttatccgggtgggcccaatgtaatcacaagggtccttawaagagggaggcagagggtcagagtcagaaga
aggagatgtgacgatggaagcagrragngaaaactcaacgttgctggctttgaagatggaggaaggggcc
atgagccaaggaatgcgggcagcctctagaagctggaaaaggcaaggaaacggattctcccctagagcct
ccagaargaacgcggccctgccgacaccttgattttagcccagtgagacycattttggacttctgacctc
cagaactgtaagataataaatttgtgttgttttaagccactaagtttgtggtaatttgttacagcagcma
yaggaaactaataca
>MLT1E   (MLT1e subfamily) - a consensus.
tgtggtaggcagaattctaaratgmtcccaatgatcctcgcctcctggcgtaatctccttgagtgtgagt
aggacctgtgacttgcttctagccaacggaatatggcaaaggtgatgaratrtcacgtgattacgcgtac
gtgattatgtaasattcagtctttgmcgtcattcttgccgagagactctcctsctggtyttgaagaagta
agctgccacgtcatgagnnnncnnannagarygccgcaaggcaagggnntctagagctgagagtcgccct
tactgatgggcagcaagaagcaagccacctcagtcctacagccgcaaagaactgaattctgccaacaacc
tagtgagcttggaagcagatcctgcccagtcgagcctccagatgagancgcagccctggctgacgccttg
actgcagccttgntagaccttgagcagaggacccagctaagccgtgcccagactcctgacccacagaaac
tgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgttacgcagcaatagaaaa
ctaacaca
>MLT1F   (MLT1f subfamily) - a consensus.
tgtggtagccagcctccaagatggcccccaatgatccctgctcctggtattcacayccttgtatggtcyc
ytcctacattgaryyagggctrgtctgtgtgaccaatagaatagggcagaagtgatggcgtgtsacttcc
aagaytargtcayaaawaacactgtggyttctgcyttgntctcttcgggctactcactctgggggaagcc
agctgccatgctatgaagacactcaagcagcctatggagaagtccacgtggsaaggaactgaggtctcct
gccaacagccagcttcgacytgccagccatgtgagtgagccatcttggaagcggatcctccagccccagt
yaagccttcagatgactgcagccccggctgacatcttgactgcaacctcatgagagaccctgagccagaa
ctacccagctaagctgctcctarattcctgacccacagaaactgtgagataataaatgtttrttgtttta
agccactaagttttggggtaatttgttacgcagcaatagataactaataca
>THE1BR   THE-1B Mammalian LTR retrotransposon internal sequence - a consensus.
gtaaattggtaccagtagagtggggcgctgctgaaaagatacccgaaaatgtggaagcgactttggaact
gggtaacaggcagaggttggaacagtttggagggctcagaagaagacaggaaaatgtgggaaagtttgga
acttcctagagacttgttgaatggctttgaccaaaatgctgatagtgatatggacaataaagtccaggct
gaggtggtctcagatggagatgaggaacttgttgggaactggagcaaaggtgactcttgttatgttttag
caaagagactggcggcattttgcccctgccctagagatttgtggaactttgaacttgagagagatgattt
agggtatctggcggaagaaatttctaagcagcaaagcgttcaagaggtgacttgggtgctgttaaaggca
ttcagttttaaaagggaagcagagcataaaagttcggaaaatttgcagcctgacaatgcgatagaaaaga
aaatcccattttctgaggagaaattcaagccggctgcagaaatttgcataagtaacgaggagccgaatgt
taatccccaagacaatggggaaaatgtctccagggcatgtcagagatcttcgcggcagcccctcccatca
caggcccggaggcctaggaggaaaaaatggtttcgtgggccaggcccagggtccccgtgctgtgtgcagc
ctagggacttggtgccctgcgtcccagccgctccagccatggctaaaaggggccaacgtacagctcgggc
cgtggcttcagagggtgcaagccccaagccttggcagcttccacgtggtgttgagcctgcgggtgcacag
aagtcaagaattgaggtttgggaacctccgcctagatttcagaggatgtatggaaacgcctggatgtcca
ggcagaagtttgctgcaggggcggggccctcatggagaacctctgctagggcagtgcggaagggaaatgt
ggggtcggagcccccacacagagtccctactggggcactgcctagtggagctgtgagaagagggccaccg
tcctccagaccccagaatggtagatccaccgacagcttgcaccgtgcgcctggaaaagccgcagacactc
aacgccagcccgtgaaagcagccaggagggaggctgtaccctgcaaagccacaggggcggagctgcccaa
gaccatgggaacccacctcttgcatcagcgtgacctggatgtgagacatggagtcaaaggagatcatttt
ggagctttaagatttgactgccccgctggatttcggacttgcatggggcctgtagcccctttgttttggc
caatttctcccatttggaatggctgtatttacccaatgcctgtacccccattgtatctaggaagtaacta
acttgcttttgattttacaggctcataggcggaagggacttgccttgtctcagatgagactttggactgt
ggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggttttga
aatgtgaggacatgagatttgggaggggccaggggcggaa
>MSTAR   MSTa-Mammalian LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>MLT1R   MLT1-Mammalian LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MLT2A1   Interspersed repeat MLT2A1 - a consensus.
tgtgatggttaatactgagtgtcaacttgattggattgaaggatacaaagtattgatcctgggtgtgtct
gtgagggtgttgccaaaggaggttaacattggactcagtgggctggggagaggcagacccacccttaatc
tgrgtgggcgcmatcyaatcagctgccagcgtggctagaatataaagcaggcagaaaaatgtgaaaagag
agactggcctagcctcccagcctacatctttctcccgtgctggatgcttcctgcccttgaacatcagact
ccaagttcttcagttttgggactcggactggctctccttgctcctcagcttgcagacggcctattgtggg
accttgtgatcgtgtgagttaatacttaataaactcccctttatatatatctattcyattagttctgtcc
ctctagagaaccctgactaataca
>MLT2B2   Interspersed repeat MLT2B2 - a consensus.
tgtgatggttaattttatgtgtcaacttgactgggctaargggtgcccagatagctggttaaacattatt
tctgggtgtgtctgtgagggtgtttccagatgagattagcatttgaatcagcggactgagtaaagaagat
tgccctcaccaatgtgggcgggcatcatccaatccgttgagggcctgratagaacaaaaaggcagaggaa
gggtgaatttgctctctctccttgagctgggacatccatcttctcctgcccttggacattagaactccag
gttctcgggccttcggactycgggacttgcaccagcagccccccagattctcaggccttcggactcggac
tgaryyacgccaccggcttccctggttctccagcttgcagacggcatatcgtgggacttctcagcctcca
taatcacgtgagccaattcccctaataaatcycytctatccatcctattggttctgtctctctggagaac
cctgactaataca
>MLT2C2   Interspersed repeat MLT2C2 - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacaycagtct
agatgttgctgtgaaggtattttrtagatgtgattaacatttayagtcagttgactttaagtaaaggaga
ttaccctccataatgtgggtgggcctcatccaatcagttgaaggccttaagagcaaagactgaggtttcc
cgaggaagaagaaattctgcctcaagactgcaacgtggaaatcctgctgntttwccagcctccaagcctt
cggactcgaactgcaacatcarctcttscctgggtctccagcctgccggcctaccctgcagatttcggac
ttgccagcctccacaatcgcgtgagccaattccttaaaataaatctctctctacacacaccctattggtt
ctgtttctctggagaaccctgactaataca
>MLT2D   Interspersed repeat MLT2D - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacattagtct
gggtgtttctgtgaaggttattttttggatgagattaacatttaaatcggtagactgagtaaagcagatt
accctccctaatgtgggtggacctcatctaatcagttgaaggcctgaatggaaaaaaagggctgaccctc
ccccaagtaagaggaaattctgcctgcctgatngtcttcgaactggaatatcagctctgcggattttgga
cttgccagcctccataattgcatgagccaattccttataataaatctatctactctctctacacacaccc
tattggttctgtttctctggagaaccctgactaataca
>MER4A   a consensus.
tgtgaaaggaaaataaatctcgggrccccmaaatcactaagccaaagggaaaagtcaagctgggaactgc
gtyaggcaaacctgcctcccattttattcctaaataagatagctacaaagataaaaggctacatacctct
ctcacaatttycyacaaggaaattccttgcggacctcaagatctttaccctaaaacagttctgytgamyt
tcaccttggcawtgyaaatggrtacaggacaaaggtacagaactgaaagtcatccctctgctcacctgag
acaaatgcatatctgattgcttcctctgccctattgtttatgtaaaaatgcagattcactgagccagact
maattgtgtattcagtgaaargctgatcarrgactcaaaagaatgmagccwtttgtctcttatctaccta
tgacctggaagcccctrcttcgagttgtcccgcctttccagaccgaaccaatgtacatcttacatatatt
gattgatgtctcatgtctccctaaaatgtataaaascaagctgtrccccgaccaccttgggcacatgtcg
tcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaaataaactttctaaattgaytg
agacctgtctcagatacttttgggttcaca
>MER4B   a consensus.
tgtaaaccaaaaataaaattctaagkcccccaaccgtctgaatggacycctcctctyggccaagggcayt
ccaaagytaacctgraaaactagttcaggccatgatgggaagtgggggtcggacacgcctcattataccy
tccyycttctggaattcaggcacaactgaccagcattaacatcaacacagacnttaagtctgataagaaa
cagtttacaayctrttctctctgaagcctgctanctgaargcttcatctgcacgataaaacttggtctcc
gcaaccccttatntcataacccggacattcctttccattgatctyaantcttcaaccarttgccaatcag
aaaatctttgaatctacctatgacctggaagcccccgcttcgagttgtcccgcctttccggaccgaacca
atgtacatcttacatgtatttgattgatgcctcatgtctccctaaaatgtataaaascaagctgtrcccc
gaccaccttgggcacatgtkgtcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaa
ataaactttctaaattgaytgagacctgtctcagatacttttgggttcaca
>MER4C   a consensus.
tgtgaaaggaaaataaaaacttgggaccccaattcactatgccaaaaggaaaaaattaagctgaaagctg
agtcatgcaagaaactgcctttccttttgttcctaagcagatagctacagataaaaggttaaatatctcc
acaggtagctactctatgttcaccttatcttatgtaaagtgccgatttactgagcacgagacgaatacat
aattgactattcccctacctgctccttttctcttgcaacatgtggattcagtaatgtgaccataccctcc
ctctttcccctccagcccgcttttcccctttaaatattgaagccctcaaaatcatctttggagaaaggca
cagaccacagatgtttctgtgatttcgtgtttctttctcccgggcatgtccttaaccttggcaaaataaa
cttctaaattgattgagacctgtctcagatactttttggtttaca
>MER9   a consensus.
tgttgggaacaggcccccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgc
agcactgtgacatgttcatgatggccntaacgcccacgctggaaggttgtgggtttactggaatgaggac
aaggaacacctggcccacccaggtcggaaaaccgcttaaaggcgttcttaaaccatgaacaatagcatga
gcaatctgtgccttaagggcatgttcctgctgcagataactagccagacccaccccttcatttcggccca
tcccttcttttcccataagggatacttttagttaatcgagtatctatagaaacaatgctaatgactggct
tgctgttaataaatacatgggtaatctctgtttggggctctcagctctgaaggctgtgaggccctgattt
cccactttacacctctatatttctgtgtgtgtgtctttaattcctctagtgccactgggttaggctgtcc
ccagtcgagctggtctcgca
>MER39   a consensus.
gggcattannnctgtaggggcagaaaggtgtgatnccttccctacccatcataagggtcacggcnnacac
tcctataataaaanayaggttagcaagagaaaagcataayagatttatttaatcaaagttttatgtgaca
tgrgagccttcagaaatgaagacmcaaakactcagggaaaactctatttttatgyttagatttgatgaag
aatgganagctgcgcagaaatgtgattrgacaaaaggggwatgatctaatggtmataractgrgtgtggr
aacccagcaaggcttgtctgttcgtattcttcttggtctmtctgtgcggcattccttcctcccgggtata
gggcgggaccccttctggaatgagggtcttatgacctacwatcagacgagataggtcagawaatttcttt
acggscagcycyaagacagaaaggcgggkrawgattagagggcnagagaaggtcagaaaatgannttctg
tttyctgaggnctgcttctgaggcttagagcgccccaacattntaacaaaagnctgtccntcacctttac
cgctctgaagctgttccaaagctgctacatgaaccaaggacaaaaagccanatanttcaacaaaagatat
ncttatngttttagtcactcaggaaacagcaaggcttataggagctgagaacccggaattatg
>MER48   Retrovirus-like element - a consensus.
tgwaagattctccccrgggcctgaaagcttraggggatgartaacccctcccttcctcaggcccagtccc
aaggcgcaaggtcacttgtgccagcagtgtgcgccagcaagatagcagaagcaggaagagagccggccgg
aagacacgtacccccgaagatcgagaaagaggccatccgggtacaacgtagcagttacgtcagactggga
cacttcctgtttacaggagactataaaaccyytgccccgtcctcacttggggctgacgccattttaggcc
tcagcccgcctgcactcaggcagcacccaggcgctcattaaaacagcgtgttgctccacacctcctcgtg
ttgttgtggacgcgctctcggggttsgaaccgayacaagarccttaca
>MER52   a consensus.
tgganntcatagtgttacgggatccttggggtgtcgcttttccggccggaaacctctgtggccagtggcg
cctttgcctgagttttgcttgggcccgctgggctcgttccgcccactcggcctggcaggctgcgctcggc
tcacgctaccggcctggatcccatgcctgccaagggcgagtcaggcgcggarcagngaggggtgtgtgag
cgagcgtggggtccggccactgngcacagtcagacatgccggctgctgcagtggggcgggcagctccagg
cgccggcacaggcgccggctctccgcgaggctgcggctggaccaggcacaccgcaagcagcttccacagc
tggcaccggggaacgcagtggcgcccagaagcttggagacgccaggaaccgcagggccccaaagagggag
tcacagccctggctcggggagctcccaggtctgggctcccmgaagggccacagctcttctctccttctnt
tcgcccgcaacatggcgagcagggggcgtgtttcagccctgtttgtgttacagctctttyagccccgcca
ttcggtgggtcccgagttcttgtcctgcgwccaggaagaatgaggtacacagacaagtggagggtgagca
agacgaagaggagctttattgagcgacagaacagctcagaggagacccgmagtgggtagctcctctccgc
aggcaggtcgtcccgwcaagtgttcagctctcagcagagaggagaccctggagtgggtagctcctctctg
caggcaggtcgtcccgwcgagtgttcagctctcagcagagaggagaccccggagtgggtagctcctctcc
gcargcwggttgtcccgtcgtctgctcgagtctggctgagcctggggcttttatgggcctcagaggggag
gaagtgcatgccgattggtccatgggtggccatgggtgggcccagaaaaagcaccacaagttcccactcc
ggtccgcaggactggcagnncccnctcccagccttcaggcnntccctggcttgaaggtggggcctcactg
gggacccgcccctttctgcccaggagcctgtctgcctcctgccgccgttcatggtgcccgggctgttcgt
gccgaggggcgcctgcaggccagcgccgagctgccctcagccccgccttggcctccctcccatgctcntc
ggcgtccaaagtctggagggggctgaggcggcagggggctggtgtgtcagcnctgcctcgagcgtgcgca
catctggctgggctgcggcagcgcccaggctcagcctcgactttgctccaagatcggagcgggtgccggg
agcagagagaggccaggcagtgggagcaggcacttctgagcctgcggagcgggcgccgggagnaaggaga
ggccaggcagtgggagcaggcatttccaagcctgtgggggcaggggggccttccccggcccccaagagca
cagagatgcccgggtccacagccgcggcttgggcggctgcagctgcacccgggagggtggggctcccgcc
tgcccccggcccccaagagcacagggangcccgggtccgcagccgcggtttgggcggctgcagctgcacc
tggggagctcctgccccaactcggaaggggcggggctcccgccggcttcgtggagcgcgcagccccggcc
atgcctccctgctgcagccggcgtaatggcagcggccactccagatgggccgccgctgccatcantakgt

>R66   A 66bp tandem repeat - a consensus.
acagagtgctgattggtgcrtttacaaacctttagctagacacagagcgctgattggtgcgttttt
>MER4I   MER41I, MER57I and MER65I retroelements.
tggtaaccatggaagggattctgagtggagatgcccctgacctttgacaaatctcctatcggtgcttggt
accagcatgagctaactttatggcycaagctcaarwtrtctttatkgctcaaaccaataggacaatttgc
tgaggtctgrgagcatctccctccagagaatccctgatctcccaaaatttggtcgagatctaargtttat
tttgctgtacaactcctctttttttggagttttacttgcttccaacacaaggaaggcgagtttttcctgc
ttccatgatgatggaaggcaggtaactcctttmtggagtttsagctcgcttccaacagggaagrtgagtt
ttttttcctgcttctaggatggtagagagcagtcttcagcctgagacccattcctaggtaagtaactgaa
ttggggtttgtcttggaaattctccttcttggctaaaagttaagattaacaatcttggaaattctcctta
argactaaaagttaagattaacaaccagctggtcttaatttctccttaccattagagcgctcagtaatca
tataagttgtgcgatcatttgttttgcttaactgcttytgtttttgttgtttttgtttgtttctgttttt
gttgttgtttcwgtctttttcctattgggtttgaccaactctatccgacttgatcagtgtggtgggggga
gaaaaacggccagcaaaaggaaaaaattgancttgtttactttgactactaaatctgaaggagaattcca
aattatggggaacaaggcctctgaagtggctaaattcccacaaaaaaaaaaaaaaamaaaaaaaaaacaa
ggcyagctttttgctagccaggccaaactgaaagagcaatggctgtcaccycacgctgcagttcwatagc
taaggtyctgcnttttttttttttttcaccgtgacagcctgggtttggttcytaaatcaagccctttctg
gtttgatasttggtacttctgaaatagcagcwgtttgtcctagctaaaatatggtaatgagatttkaaag
gatttttttaaaggagctcaatggttaaaagtcagcttaattaaaaggctaacatccaagatgtatgtgt
gtatgtgtgcgtgtgtatgtgtgcatgtgtgcgtgtttgtatttaaaaggccttcatgtttttgtttcgt
cgtttgtttttctctcctaagaccttgtctttttttgagcaaagtttttttcttctcagttgactgaatt
ctgttttcttcatttacttttcttccaccctgttcctccttccctttgccatcttykgyaccaagtgaar
rgayctagaraaggcttctaatracttgagaccccttaaagaacwcagaaaaaggtgccacwcacccctt
tttgaggrtaaacttctgtttttccttatgggacctcaaaagtagtaaahagacagattcctctcaggtc
taaagctctgctytcttttgyattgcgttacctgattttttgactaaaatagttattgcaacagaggcta
ctcttgggtttttaaggaagagtgtagtgtagacacttagaaatgtctttgtttaaaaakttaagtrcac
tgtaaaagcatcatrtggyttagyctcatrataattctccctttttrgagacccagcattcagtgtgggc
tctgcccagagctcagtgrtccagttaaaaataggtagtctctatytaaataaaattggtctccttataa
aatcctatgatagatttctataattttatgtttratttggcatcaatytttaatcttcctctagcaccac
cagactttttctctctgtactttaagatgtaaattttgctatytgatttttcacctaagagttgtttcct
ttaatatgcaaatttagggctatttagctgacaactgcctagggtaatgaaacaggttatcaagaatttg
aaagtctaagataggaaaaaaaggrggtcttataaatctataagatgtacttctatcagcatgcctaata
cgtctatgtatttatgtgttgtgtacacaatgtttcactactaaaaatatataaaagagctctaattaat
tggcttaaagaaaaataaaagtgcttaaatcaaatactttatcaggaaaaaagaaaagactagtcaaatg
ctttttcaagttyatgaaatgctttttcaagtttatgtaacttaagtaaaatctttaataaataagctag
ctttaaaattattggtaaagtaatattagaaatgtcttaagaattgccagcatacatttttgtttgcatt
atattaatcaagcartttcatacttatccctgccaaatactataaaggtgtcaaaatttggcataggggt
tayaaaactataaacccagcccaaaacagaatgatctttgcttgtgtaatttttaataaataagacattg
atattggtttaatgaaaayagctrcatcttgaatttagtaagattaccataacttctaaccttgtggctt
taggcgrty*tttaaatgatgactatcgcagttttcataaataatctaggtaaacaattaataaaataat
taggtaaatgtaatgggataaatacttgtagacaaacttgtcataatttagaatataaagttatattaaa
ttaaataatagatawttwattatttgrgtattttccaataaaaatatattgtaggaaaacattcttkctt
aaaaaaaagtgtgtcctttttaaaaaaatggtgaataagttttgtctaattcaaagcttatttaaaggtt
atrtataaaacaaggtaaaaggaaccaggaaataaaaaaaatgtaaagaaagttataaaaataaagaggt
attttttgnargtaaaaaagctgaaaragaaataattttatatgagaaagaatcttatatggtaaattta
tgagaaagaatcttgtatggtaaatttttgtcctaaaataaaatgactggtttttaagaaagaggwtgtt
taggacaaatcagaaagtccaagcatgttatwaatggtctgtgtaagtcataataaggtttgcataaaga
gaaattaaaaaawtttatatgattaagttggctataattaaaagraaattatttataatagtctttctag
agattgakgtttgatattaaaaatacactaatacactaaaaattkgttagaaaaacaaaattttcttaaa
gtattgatttaytcataaaattacaagagattttaattttaatccaaaaattcaacttttattgcatctc
actgttttcaagctttttctcctctttgagaaggcctgagataataactctctccttcaacttttttgtc
agctcctgtaattttttcctchggttctaactgytgttgtggcctgatgctaaaaatgttttatyttaaa
ggtctaaaagmaatgttttcttccaatataacattctgtactckkcttttcttgatgtgtctgaattgtt
ccatgaaaccagaaaacttcactcataaccctggayacactcttccttgtctaattaattcaagtactat
tttcatcagtttgacttcaggttatctaaagggcttcccataaggagaagcaatcacactgcagaaggtt
tttcttttsctttttggtaactggcctaagaaaaagattttatgttttatcaagataatttttgtgttat
tattattaagtttttgatttgcttaggaaaactgagattaaaattttttaaattaaggttattacatcca
tgtatctttctgtattgcttttaaagtccttgtgacattgagttacagggctttaactcctgggtctaaa
aaggacaccaagtcctgctaaatcttaaacactgacagcaattaaagccycatcttcaggcccgtagaag
atgccaatcaaaataaactgcattcctgagacacaggaaattaaagctattcaactcctcaaggcccagg
gactatccagaagaggtgggcacgtgagattgtaagggccaattttgaaagataaaataagttcaragtt
tctctataaattaatcattaaaagtttctctataaattaatcattrawatcaaaggcacactgatgcaag
accagcatatgggcccctgtgtcagattaacaaggttttcttgaagcattaacckactccttaataaagg
ttgtaaaggttataaaaggcttatgraaattatatcttatggtcaagattaaaattttatagattgttta
taaaattttgaaaaacaaatttaattggcttcatgctgtttttattagggcttattgtttggaaaattaa
gtctcctctctcaaagaatgaaggtttttgccttttttgaaatccttgagttatcactttggttaaatga
atgacttattttacaatgacctgtgattctattttgtgatatcaagtgttttaaacctttgatatttgac
aaactttccaaaatcaaattataaattatgtctttctgacctaattaatcctttaagatattaggttcct
taaagtccaaaaatgacataatttggcttatttggtacaaaaattatayaggaagcattgtcaaatatga
aaaatgtttaancytctttgggttrtatttgtataaatatgttattggtatatgttccaaaattatatga
aactcctataattctgatatrtcttagtgtatattatcartaataattataattattatgttaaattatt
gtatgccacagargtaaccaaatttcctcgtcaattgtgtctttaactatggctgttctaagacttttgt
catccacggacaattgttttattttgrtcctytttaaaaggtagtttataatcagctatagractctaac
aagcgctcttaaatrcaggtttctgataactttggagattgtgacatcggaatagaggaaaaactttcag
gactcatggararctaatgtgttcatgaggattgctaacccaacatcgagcaagcagaacaggaattaac
tgcatggactgaaccaatagaagabtgaaadaatctttttgactttttgcttaaaacgttgctgatcctt
tgttttgtttttcagagtcaagaaaacttttcttttgagctatttacagcttttaacaattgagtatagt
atactcctatgaacaaaatttggagcatatttgtttctctctacctgatttctccagaatttggaaacta
tttgtgagtattcttaacttatggcaatacagttatttgcataagtgcaataagaatctgttttcatttg
taacaggacacaattggagaaactggttattttaccaaggctttgactggaatggtgtactttcctttaa
ggaatcaaacttgacttatggagccaataaaagcccttggaaaaactggcctcataccttgtbtacgcag
tccctgtacaaggtttctgacctgtggtaagtaaagaatgtcactttctgacaggcccaggagccccarg
tttatcttggaacctcaagaggagaggaaattcacccaattcataggtatttgawggcgcaaatccatgg
ctgggctcggctttaaaaaagtcttatctgagattccttctatggaaaaaagttccakcaaagccaattt
aaaaagagcctatataamaaatmattattcttgctgcactttatgcaaataatcaggccaagtataataa
gastaaaacttattttrhaaacaaattggtcctaccatgatttgtctttagtaaaaatgggaaactggag
agagaaaaattatgtttcaaaaactatagtatacctgttattagattctagttgtttttcaatttttatt
attttctacagtttggactgaattctaaattttttcctggctacaagtctccaaaataatgttttcaata
ctttttctttttttccttccwtttttcccatttttcctaatttaaaatcactraaaactaaagctgtgct
tktcttaaagccctgcaaactgaarctagacaacttaaacttcagaagaaaataatagcaacctatttac
atacataagccactttcatacctgcctactgatgtatngacttcagagtaatgtgrcctrtrtcaatttt
ccaggattgttcttttgtttgttgttgtttttctcccttcctcctcctattttstcttcataggacatga
gacttcacaacctgctaaaaatragctttcctaawawctcgggacctacccgtctaggaataaactatcc
tagccacgagagatcagacgaaacctgagaccagagactcattttcttctaaaatgctttctccaaaaga
ttttagaaaagaagggaa
>MER49   Medium reiteration sequence MER49; LTR-like sequence.
tgtaaactaaaaataaaatcttaagccccccgccgactgaacggaccccctcttggccaaggggacccca
gagaaaccttaaaaactgagttcccggccatgacgggatgggaggtcagacacgcctcattataccccct
cccttttgtggtttagacacaacaactgaccagcattaatgttaaaatagagatcataagactgacagaa
cggactctttgtggcaataagataccaaattataaacaggacctaaggccatgccaggcaagggttaagt
cacgcacccctacacttaaagaataaactatgttctaactgccacaaggtttttctttttctctaacagc
taaacaagcactggcctcgagataagcaatattaaaacaattgcagctcatccascaccagacgctgact
aactgaccccctgttccaccagccataactacagctttgattggacaagagactgatttcagtaactttc
tcctgataagagaccaccggccatggactggttctggccagtttacagaggctgtgcacttgcacgcctt
cgtgtcctgaaaasaccttttgacgtatagggcctaattgtaatacatttaaatgttaagtctccacccc
aaagtgaacatgggtcgtatgttacatgcatgtttgttcaatacgcatgcgtcaggaccaccttcatgaa
tattcatagctcctcctgtaacctgttgaatatgtatgcttagccaacccgttcagcataaagctcctgc
cccaacccctcctccttcgaagtgcctgtctctggtcttggccagaggctacgcttcccagcctgcggga
tggccaccttgcaggctgtaaccctttataagaaataaagtctcctttccaaatttatagatctcgtgat
ttttcagttgaca
>MER4D   MER4D - a consensus.
tgtaaaccaaaaataaaatcctaagccccccaaccgactgaacggatccctctcttggccaaggggaccc
caragaaacctgaaaaactaattcaggccataacgggaagtggggtcagacacgcctcattatagcctcc
tccctttggagttcaggcacaactgaccagcattaacattaaaacagagatcataagactgacaaaacag
actntttgtagcaataagataccacgaggacgaagytctkatttttttatcttgcccaaattcctatgta
aggggtctagggagtcgcgccttacaaaccatgaattctcattagatgggttttattaaaccctgtatat
cgtgacttaatttccaacctgactctggtatagcatcacatgacagatagcagaccctgaaggaaatcaa
aatattttaccccaaaatatatttctttgacatattttgaaatggccctgcgaagctgtctcttgtgggg
aaaatctgcattctgtagagaatctctttccctttctaggtctttttccctgatccaggggagaataact
gagagtctggcaccttttaaggtctgataagagaaawttaccatctattctctctgaagcctgctacctg
gaggcttcatctrcatgataaaanccttggcctccacaactccccttatcttcactcgattgatttcaay
tctttagacagagcttaactctttcaaccaattgccaaycagaaaatctttgaatccacctatgacctgg
aagcccccgcttcgagttgtcccgcctttcckgrgcgaaccaatgtacaccttacatgtattgatttatg
tctttgcctataagttccgtctccctaaaatgtataaaaccaagctgtancccgaccaccttggrcacat
gttctcaggacctcctgaggctgtcacgggccatggtccttcactttggcaaaataagcctctatttaaa
ttgattaaaatctgtctcggatattttttgctttaca
>MER39B   MER39B - a consensus.
aagcagaataatggagaaaagcatatacatttatytaacatgtatacactgtatacacgggagccttcag
aatgaagacccaaagatacagggaaaattgtccatttttatgcttaggttcaacaaagaatggacagccg
tgtagaaatatgactggacaaaaaggcyatgatcyaatgctaatgagctgagtggggaaacccagcaagg
cctgtctgtctagattcttcttggcttctctgagcacgcattccttccggntatagggcggggccctctc
tggaatgggggtcttatgacctacaatcaaacaaggtaggtcagataatttctttatggccagtttttac
acagaaaggtggagggaaagttagagtaatatttttaggttttatggctggctttgsaggaaaggrgttc
tggtttctatgacctgccttggggaagagagattctagtttctatggctagcctcggggaggggagaatg
ggactgagagacaggagggcgggagaaggtcagagaaaaaytttgcttctgaggccttcattttgcggta
ttgttttctgagccccaacca
>MER61   MER4I/MER41I/MER57I/MER65I retrovirus-like elements.
tggtagtgagacagccagatgggaaggggtccccggagaaactccaaccggcctgcgcactgggaggart
gcgcactggggtggagccacagaagttcgcgccatttgcagcggggaggagcctggcccctcctcttcct
gggtggaacctgggattcgaactgcgaggcgggaagtscactagcaggaarcacagtctctcrctttgct
gagrgtccctgtttccccttttcttccttttcacysaataaaaycycgycttactcacccttcaaattgt
ctgcaagcctaawttttcgtggccgtgtgacaaggaccccgtctttagctgaactaaggaaaagtcctgc
aaca
>L1PA15_5   Primate L1PA15_5 repetitive element - a consensus.
aagatggctgactagatgcagccaggwggaacakctcccactgagggaccaggacatcaggaagactggc
acactcctarcagatcttcagagggaaggcaytgagagtggacggagggaagacacagawgctgggctga
agggggaggaagctgggaaccctgcacggggctaccrmgcaccaggactcgttcctggcccccagtgact
cctggggaakgggtgagttgaacaggcaaggagyracccactctcaccatggacctctggaatcctagca
gsaggagaccccwcgaccmccayrgacacttgagytggcagggagagctgcttagagaagtggtaggggc
agramtccagcctgtgtggagcccagagggtttggtgcaggarcatctgtagtggagcacggccagggay
gcccatcccccaaggctcamcatgctcccataggagactttagcccttagggkaactgtyrgacctgaac
wctgcagggtrgtcttgcccatgagacrgggccagtctgacctgagcaccccttggtctgctggcctctc
cyggggccccagcctggccacacctgcttgcagtgcagcctccaggtgcctcctgggggcccacatcata
gcttctgcactggcagaccatgcctgaccagcagagagctccagcagggcggcccccatggmcacgcacc
agcctgcatgctccctccccacactgcagcttccccatggygctttgcctgcacacattnrcccatggca
actccccacatcactttgctggcacgtgtctgcatrggtggrttttgctttccttgccctgccagygtac
atgtgygagtgcaccctgctgtgccactgctgctggygggagtgcaccccccacccattctcccatacct
sctgactgccattgcagatggagccttggtgggcacagagccagccagccccacccccaccagyrcccyr
cccytgyrctaacactgcccctggagtgaaaccaggcacaagaacagcggatyctccccyaccctgagcg
accactcctgcttgtggggcacagagaaggcacacagacctcacmcagwyctgwgccgaccagcgcttcg
ccccgtgctaacaccaccwccggtgcaancgcawgcacagwcgccggcgrcggcccctcgccgctctgag
ccgttctgccwctgctgccgctgtgaatgcscacagggaggcaggcacccccgcacccgctagtaccccc
nacccccacctaaggcgttgagcgygcaccctgccgtgccgccgctgctgctggcacacgcaagcaagca
tagatcctgctgccaccgccccaaaaaagcactttggctggcaccacccatcggagtgttgtggccagtg
gaccgggaacacctcggncccyccagcgcagcaggttcctaacctcgaggggccagagaacaaagctggg
gacccgrtaccagccccccagagttagagcacacagcccaggagtgctgagctgagccttggncccctaa
aatcttccagaaacgaanccagtcaactgaacccaccttataccacaatcaaacccccaagggcatcaaa
gaagatraaagaaaaaaaaaycatccaaaggacagcaacttcaaagattgaaggaacatcagcccacama
gatgagaaagaaccagtgcaagaactctgrcaactcaaaaagccagartgycttctttcctscaaatgac
tgcaytasttcyycagcaakggttcktaactaggctgaaatggctgaaatgncagaaatggaattcagaa
tatggataggaatgaagatcatcaagattcaggagaamgtcgaaacccaatccaaggaakctaaggaatc
acaataaaacgatayaggagctgamagacaaaatggccaktwtaraaaagaaccwaactgatytgataga
gctgaaaaacwcgctacgagaatttcataata
>MER31   a consensus.
tggtgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaagccc
cgaccttgggcyctgtccttggcctgcwnagtccagttttagcaagaatcctgctaagtcagtttagaga
gaatcccccaccctcgatatctgatcaggttcctcatcctccgccatcccccaggcgatgtctgatcacc
ctggcctgccttcagcaagaatcctgttaggtcagtttagcmagaatccccctacccctgatgtytcctc
ttagtaattttccatccactgacccccaccctgctccttggctataaatccccacttgtccttgctgtat
tcggagttgagcccaatctctctcccctactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtctgccttaccgtgctttaacaagtgtcgttgaataattttctctgaca
>MER34   a consensus.
ccatggnagrgaaggaaaaattttwcctctaccctcttagagtttccggctgggcccgataattaaactg
acataagacagattaacaggagaaaagcatacaaatttatttaagtatgttttacatgtacatgggagcc
ctcataaggaaatgaagacccaaagaagcggttagagtcgaacgcttwtatactaggttggacaaagagt
agtaaattgtgaaaacgtgacaagacaaaggggtttgggctagggcggttcatcgtggagaagtgactag
gaagatragrgttagtttaacaaggtttgttcgtacagatttccctcggcctcgactccccgtctctgac
gataagaatgtttccttcctcctggtatagagagaacgtctttcacatgggagttttatctcctgctttc
aggaagaaaagaggaaggtcagagtgctcttcttgcayctgctgtttctcaagtgcctttagctcaaaat
aatccttatgccaaagtggcatattttggggtggcatattctgatctccttcawta
>MER41A   Repetitive element MER41; subfamily MER41A.
tgtcagagacgtgtgaaccagagcaactccatcttgaataggagctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctacactcccaccagcaccatgacagtttacaaatgc
catggcaacgtcaggaagttaccctatatggtctaaaaaggggaggcatgaataatccaccccttgttta
gcatatcatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctgtctatggagta
gccattcttttattcctttactttcttaataaacttgctttcactttactctrtggactcgccctgaatt
ctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttgtaaca
>MER41B   Repetitive element MER41; subfamily MER41B.
tgtcagaggcgtttgaaccagagcaactccatcttgaataggcgctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctcattatatgytaattataatgcattagcatgctaa
aagacactcccaccagcaccatgacagtttacaaatgccatggcaacgtcaggaagttaccctatatggt
ctaaaaaggggaggaaccctcagttccgggaattgcccgcccctttcctkgaaaaytcatgaataatcca
ccccttgtttagcatataatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctg
tctatggagtagccattcttttattcctttactttcttaataaacttgctttcactttactctrtggact
cgccctgaattctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttg
taaca
>MER41C   Repetitive element MER41; subfamily MER41C.
tgtcagaggcgttcgaaccagagcgactccatcttgaatgagggctaggaaaatgaggctgagmcttgct
gggctgcattcccagraagtcaggcattcctaacctctagatgtttacggttaagggaacagattaataa
tgtttactaaacagacccagacttgggagtgtccagatatcccgatatctkgagaacagaggcattccta
atttckctttaaagataataatattgattcttgcaaaakatagtaattaagcaaagatkrrcaatccttt
gtcacaagcccttgtagcagagcacatctcccccgtaatgttctttggctttgttatcctatatataaac
aagcattgtacctagggtggacgcsttcctcctsttgctttcgggaacgccctgctctgtctatggagta
gccgttctttcactmctttactttcttaataaacttgctttyactttacactgtggaatcaccctgaatt
ctttcttgcatgagatccaagaaccctctcttggcggttggatcaggacccctttcttgtaaca
>MER50   Primate MER50 repetitive element - a consensus.
tgttagagtaggtagctaggcagrcatgagcagggcaggagagggcnccccccacacacaccacgaatgt
cgggtgaccatcaggtgatggtcaggcggttgttaaactgtctctctaaaataataattggtcacagcca
gcgccagggaaargcagtctcctaatagatagaaaacacctgaarctggtgatcagcagcttcccgataa
gatctcaggagttgggcgagtgagctcaagcatgcgcactaagaggcaaaatgrcggagtttaaccggca
tatgaccttcctctaggaacactccaatggtaagggaaraatgcctcaartgagcatgtgcacaactcca
gtaaacacactgtgcatgcggcccytcccaagtgctggcaggccactgcgcacgcggacagcccacccca
aggaaaaatcaagggaggagraacgcaaaccccggaagcatgccgatgtataaaaccccaagtcaaaggt
caaaccgcgcacttggtctctcaagtcgcccgcttggccctcttccaagtgtacttcgcttcctttcgtt
cctgctctaaaactttttaataaacttycactcctgctctaaaacttgcctcggtctctttttctgcctt
atgcccctcagtcgaattctttcttctgaggaggcaagaattgaggttgctgcagacctgtacggattcg
ccgctggtaactcagataccttccaccggtaaca
>MER65A   Primate MER65A repetitive element - a consensus.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER65B   Primate MER65B repetitive element - a consensus.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacaaggacatttgcctgacaactgt
ctcacraacctagctactgcaagagcctactgtaactctaagattacaaatcctacctagcaactgccga
cactcgccaatcagagctcgccagctcttstaagacgctgctagcgccaatgaactttctttcaaaacaa
yttgtgtaaccttctctttccttaataaaaccctaacatttttctttgttctctggacataccgaaggcc
acctggtctgtgtgtatgccccaaattgcaattctgttcttcacatgttattcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER66A   Primate MER66A repetitive element - a consensus.
tgagataggaggtgggactcgactccggaggcggggcttgaactccagaccagattgaagactagctgaa
acagggccagggcaaaagcacctctccataagacacacccaccggtgccawgtgagtttaccattgccat
ggtaacagccagaagttactgcccctttccatggcaatgacccggaagttaccaccccttttctagaaat
ttctgaataacctgctccttaatttgcatgtagttaaaagtgggtataaatatgactgcagaactgcctc
tgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctctgctgctg
ctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctttcctgggc
gaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER66B   Primate MER66B repetitive element - a consensus.
tgaggtaggaggtgggactcgactccggaggcggggcttgaacaccagaccaaattgaagactagctgaa
acagggccagggcaaaagcagctttccataagacccacccaccggtgccawgtgagtttaccattgccat
ggcaacagccagaagttactgcccctttccatggcaatgacccgatgacccaaaagttaccacccctttt
ctagaaatttctgcataaaccgccccttaatttgcatgtagttaaaagtgggtataaatatgactgcaga
actgcctctgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctc
tgctgctgctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctt
tcctgggcgaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER67A   Primate MER67A repetitive element - a consensus.
tgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcctcaa
cctcggcctataaagacttgaacaaacactaacatagtttctaatagctcaaggccacatccctaggatg
accctagcccccccttaaagtgcctgcctgagaaaactcaaggctgccaaaataatttactgtttgttcc
agccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaacttcgataag
cgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcacttccc
tgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcacc
tctgcacaaatcgaagctgagctcagttcacgctggactcttttccctactgcaatagtatattactgat
taaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67B   Primate MER67B repetitive element - a consensus.
tgagaactgcagaactctcggcacagaacaactccatccaaacccctgcactaagagacttgaccaaact
ctagcatggcttctagcagcataaggccgcgtccctaggatgaccccagcccccccttaaagtgcctgcc
tgagaaagctcaacgctgccaggagaatttactgtttgttctagccaacacctgatgataggcccctgat
ctccctttcttagagcatttactaaaaagggcttacaattgtgaatccttcctctgtccctttgagatat
gtatgtatctcctacaactcaggagtgtctttctcaaggacctgagagccattcctttgaaatgtaatca
tcgagaaggatagggcctctgtctcccagtctctgtgggaggatagaatcctaactttgataancgccag
ctagcagacacagctggcctaatcacattgacactgaccagccctttgtaatttttcacttccctgactc
tgctgagcccccacgtnccctctccccnctccctcattctccctttaaaacgcccagtcacctctgcaca
aattggaatggarctcagctctttcccctactgccagtagttactgaataaaatccgttttcaccgcttt
aactagtgtccggctttgtttatctttgaca
>MER67C   Primate MER67C repetitive element - a consensus.
tgtaagggcaaatacaaattaaaaataagaggcttnaattctccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgaa
atgtatgtaaatctttttaaaagctaaataagcctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaawcatcaaggaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaacttcagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
atgagaagtttatttttcctttggataaagccaattagctaacacagatggccaccccaattaccaggtg
aatttaggatgaactatgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtstt
tgcaatctcttagcagattgcctgtgatgcgcatcacattctggtttaatgcttattcaataataaaacg
tgttttctttctcttctacctttgtggagaggttttctgggttgggagragattttgtttttaattatat
ttccccaaca
>MER68A   Primate MER68 repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttcggtgattcaccaggaggactcatgggactcagcata
tagtcgtactcatagctatgatttattacagtgaaaggatacaaagcaaaatcagcaaaggaaaagacac
acgggcggagtccggaggaaaccaggcgcaagcttccaagagtcctctcccagcggagtcacacaggacg
tacttaattcctccagcaacgagttgtgacaacacatgtgaaacgytgtctaccagggaagctcattaga
gactcagtgccccggggttttcaytgggagctggtcacaaaggcastctctgcctagcacgtaccaaaat
tccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagtttaggcacag
tgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgccagccaag
ggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttttctgcac
agacactctncagatcacttt
>MER68B   Primate MER68B repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttctgtgattcaccagaaggactcatgggactcggcata
gagtcgtactcatagctaagatttattacagtgacgtagtaaggatacaaagcaagatcacaaatggaaa
agacacacgggcggagtccggaggaatccacgcgcaggcttccttatgtcctctcccagcggagtcacac
aggacgtacttaattcctccagcaacgaaaatgtgacaacacatgtgaaacgytgtctgccagggaagct
cattagagactcagcaccccggggttttcagtgggagctggtcacaaaggcactctctgcctagcacgta
ccaaaattccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagttta
ggcacagtgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgcc
agccaagggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttt
tctgcacagacactctncagatcacttt
>MER72   Primate MER72 repetitive element - a consensus.
atgaagacagcgtwctcttnngnattancatgataaataaaaatraaatcctaaracccccaaccgactg
arcagaccacctcttggccgaggggaccccagagwaaccttgaaarctgagttcycggccgkgacgggat
ggagggrtcagacacacctcgttrtacccctcccttrctaaccatsaykrggcttgcytccctaargrct
aaacagaaaccagcyctttcgaaagactccagcactgrnnnnnnntcctttccttcctgrtaagagacca
ccraccacggagwgkttctggccagtctncggaggatgtrcagcgagggttttcgtgtcctctgcttcac
cttttgacgtcagagggccgaaaactccaccctcngatcatgctaacactgccaktttttgwacatgggw
cccatgaagaggcaggaarctcaattgtgcacgcgtgtgtttctccyttcacgnatattcatgactcctc
ctatagcttattgaatatgtatatttggccatyccactcagcataaattcctgttccctttgccyctccc
tcgaaatgtctgtttctggcttctggccggaggctacgcttcccagcctgtcagaatggccgccctgcag
gctgcaaccctttatgagaaataaagctctcctttccaaatttgaacctcntcattcttcagttgacaaa
gtrkcaaarat
>MER74   Primate MER74 repetitive element - a consensus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER77   Primate MER77 repetitive element - a consensus.
actacggggggaggtgtcaaattcaaaggtctccaagacmaccctcctgtttartgattcgctagaagga
ctcacagaactcagaaaagccgttatactcacagttacggtttattacagtgaaaggatacagattaaag
tcagcaaagggraaaggcacataggncagngtccaagagarmcaggcacgrgcttccagttgtcctctcc
cggcggagtcgtrcgggcagcgcttaattctcccagcaacgrtgtgtgacagcacgcatgaagtattgcc
aaccagggaagctcacccgagccttggtgtccagagtttttrttgggggtcggtnanataggcatggntg
accccgcagcatggctgaccttggtcttctcaggcttgagccncccaagcatggctgacctnagttactc
agtctycagcccctccagargtcarryaccgtgtagcctaaggcccccaccataaatcacattgttagca
trractgtccggtatggcccaaggccytcgcagataaacaaagayactyttatcaggcaggacattccaa
gggcttagaggttatctcccarrgcctgaggataamcgagggccaganctttctttgggcaaggttaatc
ctttactgyayaagaccaca
>MLT1G   (MLT1g subfamily) - a consensus.
tgtggcggattttaaaaatggccacaaattctttgacactcttcccatcgaggagtggggtccgtntcct
ctccccttgaatctgggtgggctctgtgactgcttcgaccaatagaatrcggtggaagtgatgctrtgtg
acttctgagsccaggtyataaaarrcattgcagcttcctgcttgctggaackctcacacttggagtcctg
agccaccacgtaagaagttcarctrccccgaggccaccatgctgtgaggaagcccaagctastccacana
gagaaaccgagccatcttgraagcggatcctccagccccagtyaagycttcagatgactgcagcyccggc
tggcgtcttgactgcgccgataccacgtgggacagagawgaactrcccagctaagcccagcccaaattgc
tgacctatagtattgrgaacgaataaatgrttattgttttaagccactaagttttggggtggtttgttac
gcagcartagataactgaaaca
>PABL_A   Repetitive element PABL_A.
tgtggcaggccaggtctcactaacacaggcctccataacaactgtttcagcactgactgagtggttaagt
taaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagcccaccaagag
ttttgcctaggcctttcctgggccttgaagcatgacaaaataacgaaggaattcttaacaggacccgttt
aggattaaacaagttttactgggggtctgaagaaactccccaggcctccacaaacaagtttattgggggt
ctgaaggaactccccaaacctccgtgatttagcaggagacaagataagggtaatcaccccagcacctgga
cccatttagattaagtaaatttactgaggctccagaggaaggtcttcaggactcagaccttagttataga
ttagaagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagcttagaaggt
atataagctctggaaaactttgtaattttgagttggtctggtgataatttccaggccttctccctgtaac
cggttacagaaataaaaactctcttcctccccagttcatctgcatctcgttattgggccacgagaaatag
cagcccgaccctcagtttggtccgggaaca
>PABL_B   Repetitive element PABL_B.
tgtggcaggccaggtctcactaacagctgaacaggcaggcctccatgacaactgtttcagcactgactga
gtggttaagttaaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagc
ccaccaagagttttgcctaggcctttcctgggccttgaagcatgacaagataacgaaggaattcttaaca
ggacccgtttaggattaaacaagttttattgggggtctgaagaaactccccagacctccacaaacaagtt
ttattgggggtctaaaggaactccccaaacctccatgatttagcaggagacaagataagggtaatcaccc
cggcacctggacccatttagattaagtaaatttactgaggctccagaggaaggtcttacaggactcagac
cttagttatagattagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagc
ttagaaggtatataagctctggaaaactttgtaattttgagttggtctggtgatattttcccggccttct
ccctgtaaccggttacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacga
gaataagcagcccgaccctcggtttggtccgggaaca
>MER57I   MER4, MER41 and MER65 retroelements.
[encoded data, 7597 characters]
ttttggtcaatctctcaaaattgagaaaatgaccaaaaggggggaat
>MER65I   Primate MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>MER41I   Primate MER41 repetitive element - a consensus.
tctttctggcaaccacagaagggactacagtgcagaaaccctcaacccaaaggctaactttgagtaagtg
atagggtcctgtaacatctttctggcaaacccaaaaggacaatactgaagaaacctcccaatgcaaagga
aatagactacatcattgataggccgaccttgggcaagtggtggggtacccaggtaaaagatgggattggg
ttagaggcccaatttagggaagtttgggtctctgctaagacagactgggttaaaggcccctcttaataaa
tggcaaggatgcttgaccaaacttggtttagagggccaacttaggagggttagagtccttcctaagattt
aaggggttagaggcccctctcagtaaagtccctcatggttaagaacgggtttggcactaagggatgttaa
ctgccattctctttggattaatctgtgttgcactctttgctgatggctatgggtgacaggattaggcatg
tgatcctgtgatcacgggacatgaggagctttttcttccctaaaaggggaaacttcagagctgctgggcc
tgctggaaaagatcccttctcaactgacaagtgaccgcctgaacttttgattcagtgtctgctgcaatgg
gcaggtctttctctggtctccctgagcgccttgccttccccaccctgccataagcagtgcttttctccct
tccctttccyctctctstctgtgcaaaccggttaaacraacgataaaaatcactgtttatctcctctgta
aagttttrattaatrgaaaaaaggatttttgaggctagtcttaagctgtagcgaatctggtgtrctttgt
gtgtctttctgtatngttctgtcataaaraggggtaccttaggatagaacgcwggctkaggacmcycgta
agctcactgttcaacccagcccagcaaactggtcagttataaattttgctgcaggtccctgaaacaacaa
caaaaaantggatgaggtttccctcccatcttgttttatgtccttggragcttgaccttgtaaccatgtg
gcgrtrctttcgcttggyctctgccatcacaatggcgtcccgggttcaggrttcwattcctgnctcagrr
gatgagtttctttatattcttctgtctatgtatttatatgtgttgtgtgtrtgtgatgtttatatatraa
agagctntrattaattggcttaaaraataagaagagcttaaatcaaatattttgtcagaaaartaraarg
tstartgccttttagttcacgtgactttagtaatctttgrkaaataaagacagtttaaagattattgrta
aaataaaaatgtcttcaaaayttaatktaracatttggtctraattagrcaggtcagatactatstctac
tagatgytttaaggtcataaactgcttctatgacttttgataatttttyaacttgcytgctttanagcca
ttngattctaggtaaggcctggggacatgtggagttagccacgtcccctagctatgctggagagtcagac
tttatctgcgcttctgcctggtgtgtccaaggctaggctccacacctagtacataattaaaatcacttac
taaccaggtttttcaccaaaagtaaaagttcttaagagttaacattgtaacatgtaattaagactactaa
agaaacagttccacaagtaagtcctataaggaaagtgaaatgtgtttttggttaaaaaaaaattataaga
agtcacgggagtxatgagttttctttactttgcctaaagggttagaggattattttaagttagatagaat
aaagctgaaggtttaagcaagttgtggaaggtttatttaaaaaattaattgtaagagattttgtgtgtga
atatattggctaaagttgaaaaggcattattcagtttttccataaattaaacattggaataaaagcaaaa
caggtttttgttagagcaaaaacctgcttatgacctgctttttaacaaacatttgtaaaggattataaaa
ggtttatgagaatgttaccttatggtcaaacattaaaattgggtagatatgtctataaggttttattaag
aattgggtttgacatcaataatacactaatgcaacagtgacatttggctgatttagtataaaagtcatag
aggaagcatcatcaaatatgaaatggtgtttggctttctttgggctgtatttgtataaatgtgtcattgg
tacatgttccaaaattattttaaaaaaaacttctttaaccctgatatgacttagtgtatgctattaataa
ttgttatgnnnnnntaaattattgcgtgccacagaggtaacaaattttccttgtcaattgtgtctttaac
tgtggctgtcctaagactttttgtcatccatagacaattgttgtcttgttttggtcctctttagaaggtg
gtttataatcagctgtagaactctaacaggtgctcttaaatgcaggtttctgataactttggagattgtg
acattagaacggaggaaaaacattcaggactcatgaagagctgaaatrttcatgaatatcaagcagaaca
gggagttaactgcatggactgaactaanagaagtctaacgtgtaaaacgttgctgatcctttgttttgtt
tttcagagtcaaggaaactttttcttttgagctatttacagcttttagcaattgagtaaagtatactyct
gtgaacaaaatttggagcatrtttgtttctctctacctgatttctccagaatttggaaactattcgtgag
tattctcaatttatggcaatatagttatttgcataagtgcaataagaatctgttytctttagtaacagga
cacaattggagaaattggttattttaccaaggctttgactggaatggcatacttccctttaaggaatcaa
anttgacttrycgagccgataaaagccccttggggaatctgrcctcataccttnttcayacgcagtccct
gtacagggttcctgacctgtggtaagtaaagaatgtcactttctracaggcccagrarccccaagttaty
ttgrgacctcaagaggagaggaatttacycaactcataggtatttgakggtacaaanccatggctgggct
cagctttaaaaaagtcttatccgagattccttctatgaaacaaagttccatcaaagccaattttaaaagc
ctatgtgaaaaataattattcttgctgcactktatacaaataatyaggccaagtataataaarcaaaycg
gtcctaccatgatttgtctttaryaaaaatggraaactggagagagaaaaattatgtttcaaaacctata
gtacacytgttgttarattctartcttrcctaatgtttttcagttkttnttatnttctrcantttagact
aactctacttattcctgtgaaccaaccagtgatctctggctgcwgctcagaagaaacaagrartgatggg
taatataaaaatccggatnntattctaattctgggcacgtattggaatcggctaacaaccccatatcagc
ttggttccaatagttgcccagttcatggaaagccttctaatttagtttacttgggataattttgcttatt
ttgctttactnttgtggaatatattgctgttgtactctttgtgtaggaatgcaggataagcttactraat
gttttcttaaaycgaacccttattcctcttccagggtaccatcttttgttgggaactcagttacaaataa
ccctcaccataccagtactttctggaatgagctcctcttctaccctggagggcaagagaccataatagtc
aggcagaaatatcattgcccctattcagcctgaagaagttacagaagatgaatctttgtccttctacaac
cttaggattaagggttcttttata
>PTR5   Human PTR5 mRNA for repetitive sequence.
tgagaggtggcagtgtgctggcagccctcgcagccctcgctcactcttggctcctcctcggccttggcgc
ccactctggccatgcttaaggagcccttcagcctgccactgcactgtgggaacactggccaaggccagag
ccagctcactcagcttgtggggaagtgtggagggagaggcgcaggcgggaactggggctcgatgcggcgc
ttgcgggccagcgtgagttccggtggttggtggcttggcgggccccagactcggagcggctggcctgccc
tgctggccccaggcagtgaggggcttagcacccaggccagcagctgtggatggtgcgctgagtctcccag
cagtgctggcccaccccaccagcactgcactcgatttctcgccaggccttagctgcctccccgcaggcag
gccttgggacctgcagcccaccatgcctgagtctcccctgctgccgccgtgggctcctgcgtggcccaag
cctccccgacgagcactgccccctgctccccggtgcctggtcccatcgaccccaagggctgaggagtgca
ggtgcatgctgcgggactggcaggcagctccacctgcggccccatgcaggaagccagctgggctcctgag

>L1M2_5   L1M1 or L1M2 LINE1 repetitive element 5' end - a consensus.
acaaantagggaaaaatggcggataggaggcaggactaaattgcagctcccactcggatggacagagcag
catgtggagactcacatcgtgaacttttgctccaagaaccaccgcaggaatataycaagaaagccgagag
aatycacagaccctctgaaggaagcagattgctcctgcargayccaggaaacggcccaaaaactgtgagt
gcccaaagtgtgagaagggraaaatctgcccccgaacacacatcctyactggggaacctgaagatccaga
tcacaggagaaggatttgaccttacctggagctgagacaatttagagggccgagcaaaatacaggggtag
aggaagcagtgggaaaagccctgtgggctctccgggtccccagggaagccatttctgactttgtctcaca
ggggtccctggggagggctgccagwggaactggggaaaggccacagggagaaggaaacctccagctgaac
tttgtaacaattccgaccgaacgcgaagtttcctggccagaactcaggggagggcgtgaatccggwgtgc
agactcagcacagaagccgtggcaggcaggaggcgcgaagcctgaaagccctgcttgctttctcagcwgg
gaggctggtagcctggggcaagttctcagccctgctcaccaactgcctggaaataaactcggtgctgttg
tgggggggcacggtgggagtgagaccggccttttkggttgcatgggagctgggtgaggcctgtnactgcc
agctttcccccacttccctggcgacctgcatgacacagcagaggcagccataatccccctgggaacgtaa
ctccattggcctgggaactacacccccatccctcacagtagccgcagcaagccccgcccaaggagactct
gagctcagacatgcctaaccctgcccccacctgatggtctttctctacccaccctggtagccgaagacaa
aagacataawctcttgggagctctayggccccacccatcgcctgagaaacwgaaatayttaycywggcma
mcttagggcaagcttrtatccwccctatactrtcgcagctgatgccctcttgaaagcgccacctcttggc
tggaggccaaccaactcaagacattacagcaaytcayracagaataaccctgcccctarrraaggagaaa
acgacagctatcaccactgcctgcaacatcctggctaaccagaggtcctgagtctgtccacgtgayaast
tcactrctakyataaccagcattcgagaaarccagcacactaagtctatctacaaccaaggaatctcaca
gagtctayttcactcccctgccacctccatcagagctggtgctggtattcaccgctgrgagacttgaaga
caggtcacatcacwggatycyttgcagacattccccagyaccagcccggagtctggtagctccactgggt
ggctagayccagaagagcaataacgatcactgyagtccggctctcaggaagtcccattcctaggrgaagg
gggagagcaccacatcaagggaacaccctgtgggacaaaagaatctgaacggcagsccttgagtcccaga
tcttycctctgacatagcctacccaaatgagaaggaaccagaaaaayaattctggtaatatgacaaaaca
aggttctttaacacccccaaaaratcacactagctcaccagcaatggatccaaaccaagaagaaatcyct
gaattgccagaaaaagaattcagaaggtcgattattaagctactcaaggaggcaccgaggaaggtgaana
ccaacttaaagaaanttanaatataatacaggatatgaatgraraaatctycagwgaaanagatagcata
aakaaaaaacaatcamaacttcwggaaatcgaagyacacttatagaaatgcgaaatgcwctggaaagtct
carcaatagaatngaacaagcagaagaaagaacttcagagctcgaagacaaggytttcaaattaacccaa
tccgacaaagacaaagaaaaaagaataagaaaatatgaacaaagcctccaagaagtctgggattatgtta
aacgaccaaacctaagaataatcggcgttcctgagnaagaagagaaatctaaaagtttggaaaacttatt
cgnggaaataatcgaggaaaacttccccgrcsttgctaragayctagayatccaamtacaaagaagctcw
awraaca
>MER41D   Repetitive element MER41; subfamily MER41d - a consensus.
tgttagggaagcaggagcctaggagagccagagtgacaccattttaaaatcaactccatcttaaaactag
caaggcacattccttgccagtcacgacccatggtcctaagatgtttacagttgaggaagcagcttgawaa
tacctacaaggacacactcctacaacaacagaaagtccagatgtcccaatacccataacaatatatgctt
tcaagataattatagtcatgctttgatgtacttacgcactaaaatgtcaaagatagttttctttaaatca
atatamtaataaattttgtcatgctgtcagcccacccgcacgtaggcacagcttagtttagtctttacat
agacaagactcctatataagaaaagtttaagacagagatggcgcgttcctccgcctnctttccggggacg
ccctactctgtaatggagtagtttttaataaacttgctcttctcactgtactccgcaactcgccttgaat
tccttcctgtgcgagatccaagaaccctctcttagggtctggatcgggacccctttttctggtaaca
>MER51A   a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacactgacttcctagaactnaat
caaanggaaaaccccaactttccacgtccamgtaacmaaaggaccagaggctactccctttrcannnnnn
ngatgaaaaattgaaagtacctctgattggtcccttcccgcaaccaatcaggctggtcgttggcccaagt
cttcatttgcataggagtataactttgtaacttcacttcagcctctgattgatwrctttccgcaaccaat
cagacgtttgcatagggtgtaactttgtaaytcgcttcagcctctgattggtcccctcccacaaccaatc
agactgatcgtgggccacctcttcatttacatagggcgtaccccaagtaaccaatgggaaacctctagag
ggtatttaaactccagaaaattctgtaaccggggctcttgagccgcttgctcgagcccgctcccaccctg
tggagtgtactttcgttttcaataaatctctgcttttgttgcttcattctttccttgctttgtttgtgcg
ttttgtccaattctttgttcaagacgccaagaacctggacaccctccaccggtaaca
>MER51B   Putative LTR of retrovirus-like element - a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacacttcagctatgacaggaaat
atcctctccatagggcataggccgagtaaatgactttgtaactttacttcgtcctcttcatttacatagg
gcgtaccccaagtaaccaatggaatcctctagagggtatttaaactcccaaaaattctgtaatggggctc
ttgagcccctatgctcgggcccgctcccaccctgtggagtgtactttcgttttcaataaatctctgcttt
tgttgcttcattctttccttgctttgtttgtgcgttttgtccaattctttgttcaagacgccaagaacct
ggacaccctccaccggtaaca
>MER57A   a consensus.
tgttaaattaagtttagcctaaagctgcctccttacatattttaagttcggcctaaaggtttctctgtac
atagtgaactataacctaactggaggtgtaaacagaccgtagcctactcttgtgccaatcactgagtttc
ggccaatcacaggcagccaactgttcaaaccatgttcaaataaggcaaatgccgagctgtaaccaatcca
gctgtttctgtacctcacttccattttctgtacgtcactttcctttttctgtccataaatcttctaccac
atggctgcactggagtctctgaacctactctggttctgggggctgcccgattcgcgaatcgttctttgct
caattaaactcttttaaatttaatttggctgaagtttttcttttaaca
>MER57B   Medium reiteration sequence MER57B - a consensus.
tgttaaagcaagctaaatatagcctgagaaggactccgtacttctatatttgagtccttgtggatgaact
gtaacctagcttaataggcagacaaggttgaaaacctaacttaggagtatgcgcctgtaacaatagctga
gtcttggccaatcccagcggccatacttcaaccactcanagactgctaagtgttcaaaccgtgttcaaat
aaggcaaacgccgacctgtaaccaatccagctgtttctgtacctcacttccgatttctgtacttcatttt
cctttttttttatctataaatttgttccgaccacgaggcatccctggagtctctctgaatctgctgtgat
tctgggggctgcccgattcgcgaatcgttcattgctcaattaaactcctttaaatttaattcggctgaag
tttttcttttaaca
>MER65C   MER65c repetitive element - a consensus.
tgtgaaagttgatcatacgaattgggtcattcttgtcatacccaactaaaaccagggccgaggggcccag
ggggaaaaggcactcggggcgcatagcattgctccaaaatataattctctgcaaccctggctgctgaaac
tgcctgttgtaacctgaaaccagttttatctaacagctactgaaacaacctactgtgactctaagactag
ttttacccaccaccgtcactcaccaatcagagcttgccagctccccaaaactttactagtgccaatgaac
tttctttcaaaacaatatgtaacatttctcttttttataaaacctccaaccttctctttgttctttggac
ataccgaagaccacctggtctgtgtgtatgccccaaattgcaattctttcttcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER83   MER83 repetitive element - a consensus.
tgtggagtcctaattagggaaaaggagtcaggctggcgggaccaggggaaagcaaagggagaaagcaaat
aagctataagtctgcctttcttcatggtccaggacacatagccctcctgcgcaaataactcacaatcttc
ctgcgcccaactattatcaaacacctcagctgacagaaaaatgcaagttagctcmctgcaaccttggcat
tatcagtactgcacgcagcmctctgcagcccaagaaccatcctataaaatctccagcaagcctttgtctc
cttgcagtcagctcctctcttgctggtctgcctgttgcttccttgcaacatattttcatactttctctaa
taaatctgcctttctttacctacaactgtcttggtaaattatttttacctcccgcgccaccggccccaga
tagtcgccgctccccacgrca
>MER84   MER84 repetitive element - a consensus.
tgaggagagcaaagaccacctggtgaccatcaaacaggccatccggaggcaaaactccttatctggggaa
tttagaagtaattagacttccctattatctaaagcaggcatctggttccaggcctctttcccnnaaaaac
ttataagtaactagaatttctatacgtctccggaatgcatgcatgctgaaactcactgtgcaacccttgc
tgacatcaaggcaccaaaatgtctacaaatgtaatcatttaccatgacctacgtggctaatatggtccaa
attacccttaagctcccgctttaaggtccataaatgctcctaaggaaaaatccaccgcggcgcgctcagt
cctctcttgctgaggcgccccgctgcactctkctgcagcgttctttctgtctaataaaactttccttttt
caaacctatactgttgtcggtaaattctttttaccaacccacgagtcgaccacttcccgatgccggggct
ctgacacctcgcctggca
>PMER1   Putative non-autonomous DNA transposon - a consensus.
tagagcagtggttctcaaccttcctaatgccgcggccctttaatacagttcctgtgggtcgcgacccaca
ggttgagaaccgctgctat
>MER54   Primate MER54 repetitive element - a consensus.
tgtagtgaattcttataattttatgttgcctcggcatccattttgaatataagtttaactttctcatacc
agaagcagggctyagtcacccttgacacggtttccagttctccacctcctcccagttcctcaatgtggtc
gacccagatatctgccttatacmaccgcctcctggkgaccacctccctatggaacagctggatacaacct
acttgacttgccccactgacccccacaccccacatggactgtgcaggtatgccacagtgaccacctctca
gtcacagcgtgaccccacggaactcgtgcctgcttgctctaaacccaccaattagaactccccgcgggaa
acctgcttgggtaacgccctggaccccaataaaggctttggtcccacaggtctctctctctctctctcgt
tctccccacccgttggttgagcatgcgtgtcccggacagcttcccccttcccattggccctgcgaggcat
gctgccctcttctctctgggatctgtaagtaataaactgcttctgttatttcatgtgttttgttgtgctg
cctcctctgtgtctcacctgaccgacacacccaaacctaactctcttcctggtcagggctctcctagaga
gtggctatcttggcaggaataaactggacacaggtcagacaagagccacaagggcgtctgccagtgtaaa
caagtttcctgtgagagggacacctggtcacgggtcggacacctaggcattaggccgtccgccaggataa
agaagtatcccgtgaaagatacactgtaaacacccacaaccamcttccctggagccccatcagggcaggg
ctagagtttatagccactctccagagagagacctcaagaccaaattagaggaaaatacaaca
>MLT1H   (MLT1h subfamily) - a consensus.
tgtggtagntgattgcaaaaatgacmccattctccacccctccctgtatccatgccctttgcaatgtgac
tttgcagctcctcccatcaagaggcggagtctgtttccccaccccttgaatctgggctggccwtgtgact
tgctttggccaatrgaatgckgcagaagtgacggtgtgccagttccgagcctaggcctcaagaggccttg
cgtgcttccgctcnctctcttggaaccctgccaccgccatgwgaacaagcccgggctagcctgctggagg
atgagagaccacgtggaggagagccgagscgccccagctgaggccatcctggacmggccagcccccagcc
aagatcagcagagccaccaantcaaccagcagctgaccacagatgcatgagggagcccagctgagaccag
aagaaccgcccagctgagcccagcccaaattgccgacccgcagaatcgtgagctaaaataaatggttgtt
gttttaagccactaagttttggggtggtttgttatgcagcaatagctaactgataca
>MER7A   Nonautonomous DNA transposon.
cagtcatgcgtcgcttaacgacggggatacgttctgagaaatgcgtcattaggcaatttcgttgtgcgaa
catcatagagtgtacttacacaaacctagatggtatagcctactacacacctaggctatrtggtatagcc
tattgctcctaggctacaaacctgtacagcatgttactgtactgaatactgtaggcaattgtaacacaat
ggtaagtatttgtgtatctaaacatagaaaaggtacagtaaaaatacggtattataatcttatgggacca
ccgtcgtatatgtggtccatcgttgaccgaaacgtcgttatgcagcgcatgactg
>MER7B   Nonautonomous DNA transposon.
cagtcatgcgtcgcttaacgacggggatacgttctgagaaatgcgtcattaggcaatttcgttgtgcgaa
catcatagagtgtacttacacaaacctagatggtatagcctactacacacctaggctatrtggtatagcc
tattgctcctaggctacaaacctgtacagcatgttactgtactgaatactgtaggcaattgtaacacaat
ggtaagtatttgtgtatctaaacatagaaaaggtacagtaaaaatacggtataaaagataaaaaatggta
cacctgtatagrgcacttaccatgaatggagcttgcaggactggaagttgctctgggtgagtcagtgagt
gagtggtgagtgaatgtgaaggcctaggacattactgtacactactgtagactttataaacactgtacac
ttaggctatactaawtttatwwwwwwwwwwwwwytttttcagcaataaattaaccatagcttactgtaac
ttttttactttataaacttttgcatttttaacttttgactcttttgtaataacacttagcttaaaacaca
aacacattgtacagctgtacaaaaatattttctttctttatatccttattctataagcttttttctattt
wwaaatttttwatttttttattttttaaaanatttttgttaaaaactaagacacaaacacacacattagc
ctaggcctacacagggtcaggatcatyaatatcactgtcttccgcctccacattttgtcccactggaagg
tcttcaggggcaataacatgcatggagctgtcatctcctatgataacgatgcyttcttctggaatatctc
ctgaaggacctgcctgagnctgttttacagttaacttttttttttaataagtagaaggagtayactctaa
aataataataaaaagtatagtatagtaaatacataaaccagtaacatagtcatttattatcactatcaag
tattatgtactgtacataattgtatgtgctatacttttatacaactggcagcgcagtaggtttgtttaca
ccagcatcgccacaaacgcgtgagtamtgagtratatgttgcactacaacgtcactaggcgataggaatt
tttcagctccattataatcttatgggaccaccgtcgtatatgtggtccatcgttgaccgaaacgtcgtta
tgcagcgcatgactg
>MER55   Human MER55 repetitive element - a consensus.
tgaggagagtttaatgaagggactatttacaaaggtgtgggcagggttaagggaarccnacaagggatgg
tgaagcacctmagggctagcaacatgagaagctattaccactcctaggcctaaarggrcaaggggargga
gctgttaccrgaaaccagtgagagctgnagctgtagctacaaggagagggcygcccaaaaggagctgtgg
ctttcggtagaagaatgtagccantgccaaaccgyagcccagcagggagggagccrgataaataccccaa
tctctctctccttcaccctccaatctcctgccagtgcctcccattggccaaacccaaccagaagccagag
ggcaaagaagcctggtgaatgcagtccatagaggtcagggcacagagcagggcagagaagggtgganagt
ggatcttgaaarggaaaaragaatatccagtrcagcccattccttttnncccctctgcatccactcttnc
tttttgtctggatgaaaavctcatgttctcaaaanagaatactcaaagtcctabcagctrctatatcatt
acaggatgatgtcaattcagttatrymtmtrcccacntnaaatctaaaatattagccaacaccag
>TIGGER2   Autonomous DNA transposon.
cagttgacccttgaacaacacgggtttgaactgcgcgggtccacttatacgtgrattttttycaataaat
atattggaaaaawttytggagatttgcaacaatttgaaaaaactcgcagacgaaccgcgtagcctagaaa
tattgaaaaaattaagaaaaaggtatgtcatgaatgtataaaatatatgtagatactagtctattttatc
atttactaccataaaatayacacaaanctattataaaaagttaaaatttatcaaaacttayayayayact
tacagactgtacgtggtaccattcgaagtngagagaaatataaacaaacntaaagatgcagtattaaatc
acaactgcgtaaaattaactgtagtacatactatactaccgtaataattttgtagccacctcctgttgct
attgcagcgagctcaagtgttgtgagtacctgcttaaaacgctskgtgatgctaatcatctccgcgcgag
cagttyatctctccagtaaattgcgtattgcagtaaaaagtgatctctcacggttctcgcgtatttttca
ttgtgtttartgcaatattgtaaaccttgaataacaccatgggacccatacgaagtgccactagtgatgc
tggaagtgctcccaagaagcagagaaaagtcatgacattacaagaaaaagttgaattgcttgatatgtac
catagattgaggtctgcagctggggttgcctgccatttcaagayagatgaatccggcgtaaggaccgttg
tmaaaaaagaaaaggaaattcgtgaaraccgtcgctgcagttatgcccagcaggcacaaaaacttgtnac
tttttgcgaaatacctttttatgttgtattgaaaatgcagcttttntgtgggtgcaggattgctataaga
aaggmatacctanagactctaatatgattagagaaaaagcgaagtcattatgtgannacttaaagcaaaa
rraagatgamrgatctaaagctgganaatttaatgccagcaaakgatggtttgacaattttagaaagarg
twtggcttaaaaaatktcaagakaacaggagaagcasyttctgctgaccaagagacagcagacgagttnc
cagatgccattaacaaaatcattgaggagaaaggatatctgcctgaacaggtttttaatgcagatgarag
tgccctattctggggggaaaaaatgccacaaagracatttattagtaagnaagagaagcgagcaccagga
tttaaggcargaagggataggctaactctactgttttgtgcaaatgcagttaggtttatgatcaggactg
cccttatctataaagctgctaacccccgagccttgaagggaaaagataaacgccagctgccagtcttttg
gttgtacaacaagaaggcctggacaacgagaaccctttttctggattggttccattkatgctttgtccct
gawgtcaggaagtaccttgccagtaagrgactgccttttaaagttcttttgatattggacaatgcccytg
gccacccagaaccccatgagttcaacaccgaaggtgtcgaagtggtctacttgcccccaaacacaacgtc
tctaattcagcctctagatcagggggtcataaggacctttaaggctcattacacacggtactctatggaa
aggattgtcaacgctatggaagagaaccccgatagaragaacatcatgaaagtctggaaggattacacca
ttgaagatgccattgttrttatagaaaaagccgtgaaagccatcaagcccaaaacagtaaattcctgctg
gagaaaactgtgtccagatgttgtacatgacttcacaggatttacgacagagccaatcaaggaaatcatg
aaagagattgtggatatggcaaaaaagttggggggtaaagggtttcaagatgcgaatcttggagaaattc
aagagcwaatagacaccacaccagaggaattaacagaagacgacttgatggagatgagtgcttccgaacc
agtgccagacgatgaggaagaagacatngaagaagcagtgccagaaaacaaattgacattagacaatctr
ggcagaagggttccaattattcaagactgcttttgacttcttttacaacatggacccttctatgatacgg
gcactgaaactaaagcaaacagtggaagaaggattggtaytatacagaaacatttttagagaaatgaaaa
ggcaaaaayrtcagacagaaattacgatgtatttccgtaaagttacaccgagtgtgcctgcctctcctgc
ctccccttccacctcctccacctcttccacctctgccaccctgagacagcaagaccaacccctcctcctc
ctcagcctwctcaatgtgaagacgacgaggatgaagacctttatgatgatccacttccacttaatgaata
gtaaatatattttctcttccttatgattttcttaataacattttcttttctctagcttactttattgtaa
gaatacggtatataatacatataacatacaaaatatgtgttaatcgactgtttatgttatcggtaaggct
tccagtcaacagtaggctattagtagttaagttttkggggagtcaaaagttatacgtggatttttnactg
cgcggggggtcagcgcccctaacccccgcgttgttcaagggtcaactg
>CHARLIE3   CHARLIE3 repetitive element; HAT-superfamily DNA transposon.
caggggtccccaacccccgggccacggaccggtaccggtccgtggcctgttaggaaccgggctgcacagc
aggaggtgagcggcgggcgagtgagcgaagcttcatctgtakttacagccgctccccatcactcgcatta
ccgcctgagctccacctcctgtcagatcagcggtggcactagattctcataggagcgcgaaccctattgt
gaactgcgcatgcgagggatctaggttgcgcgctccttatgagaatctaatgcctgatgatcnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagccctttactgttggtgaagaggtgatcctgcct
gctgccaagcacatttgtcatgaactcttaggagacgctgcagttcaaaaggtgacatgtgttcatcttt
catctttcagccatcacaacaaaatgaactgatgaaacagcagaggatattgaggcacagttgttaaaga
ggatgaatgagtcactgtggtatgcaatccaggttgaaaagtctatcaatgttaacaaggcaacaaggct
tgcttttgtgtgatatattttcagaaggatgtgcaagaggatatgtcatacgcacttttattgccaacca
acaccacagctgcagaattattcaagtctttgaatgattacatatcagaaaaatggaattggtcattttg
tgtcagtatacgcacagacagagaggcttccataactggatgtccttctggcttcacaacttgggtcaga
tggtcacttctgcatgtgactccacacattgtgtcacccatagagaaatgctggctagctgaaaaatgtc
acctgaatttagcaacattttgcaggatatccttaaaattatcaaccacattaagtacatgcccttaacc
cacatctgatggtgcagctctgtgaggagatggacgcagggcacacacgtcatctcttatacacagaagt
gattgctttctaaaggtagattactggccagagtttttgagttacaagagccactccagagatttctttt
agaaaaacagtcaccactggcaacacatttcagtgacacagaatggctcacaaaacttgcttacttatgt
aacatattcaacctgctcaatgaagtcaatctgttgtcacttcaagggagaatgacaacggtgttcaagt
caacagataaaagtggctgcattcaaagccaaactagtattatgagggcaatgcataaacattgggattt
ctgacatgtttcaaacattagcagagattttgaaagagactgagccagggccttctttctcccagctggt
gcatgatcacctatctcagctttcaaaagagtttgagcattacttcccaaccacaaaagaaccccgaact
gggaaggaatggatccgcgacccgtttgtgaataagccacgcgaatcacctttgtccgcgctagaagagg
atcaactgcttgagactgcaaatgacagtggccctaaaagtgtgtttgagacaacttcaaatctccatac
gttctggattaaagtcaaagcggaatatcctgagattgccacgagagcactgaaaagcctgcttccattt
ccaacatcctgtctttgtgaagcagggttttctgcagtgacagcaaccaaaacgagattacagagtagac
tggacataagcaacacacttagggtgtcactgtctcccatcacccccagatgggaccgtctagttgcagg
aaaacaagctcagggctcccactgattctacgttatggtgagttgtacaattatttcattatatattaca
atgtaataataatagaaataaagtgcacaataaatgtaatgcacttgaatcatcccgaaaccatcccccc
cccctggtccgtggaaaaattgtcttccacgaaaccggtccctggtgccaaaaaggttggggaccactg
>LTR9   LTR from human endogenous retrovirus-like sequence (HUERS-P3).
tgaraanaaactgatataggagttaagaagaaatcacttaggcagatagcaagggtatgggagtcctcag
taaggcttttctttttaatgaaaagcagccccaaatcattttctaacaaagagcagcctgtaaagttgag
ctgcagacgyagacaagcaagctggnagcttgcacgggtgaatgctggcaggaactagggactagacatg
ttcaagatggcggctccatcttcccttctctgccagccacgtgtacagtaaggagcagacaagatggcgc
tggccaaggggaaagttcatttgcataataagattagggtggrgagrccagccttccccgcgcgctatgt
aaacgtcatacctgatcaaaccaatctrtgagccctacgtaaatcagacaccacctcctcaarccggact
ataaaatccggcacatccgccaccagctggtcttttycnctcggaagacccctctctctagagagagagc
tgtttttctttttcttttcttctgcctattaaacctccgctcctaaactcctcatgtgtgtycgtgtcct
aaattttcctggcacgagacgacgaaccccggtgtatayataccccagacaatgtagccacttcataang
gggrctcgtctrggat
>MER52   a consensus.
tgganntcatagtgttacgggatccttggggtgtcgcttttccggccggaaacctctgtggccagtggcg
cctttgcctgagttttgcttgggcccgctgggctcgttccgcccactcggcctggcaggctgcgctcggc
tcacgctaccggcctggatcccatgcctgccaagggcgagtcaggcgcggarcagngaggggtgtgtgag
cgagcgtggggtccggccactgngcacagtcagacatgccggctgctgcagtggggcgggcagctccagg
cgccggcacaggcgccggctctccgcgaggctgcggctggaccaggcacaccgcaagcagcttccacagc
tggcaccggggaacgcagtggcgcccagaagcttggagacgccaggaaccgcagggccccaaagagggag
tcacagccctggctcggggagctcccaggtctgggctcccmgaagggccacagctcttctctccttctnt
tcgcccgcaacatggcgagcagggggcgtgtttcagccctgtttgtgttacagctctttyagccccgcca
ttcggtgggtcccgagttcttgtcctgcgwccaggaagaatgaggtacacagacaagtggagggtgagca
agacgaagaggagctttattgagcgacagaacagctcagaggagacccgmagtgggtagctcctctccgc
aggcaggtcgtcccgwcaagtgttcagctctcagcagagaggagaccctggagtgggtagctcctctctg
caggcaggtcgtcccgwcgagtgttcagctctcagcagagaggagaccccggagtgggtagctcctctcc
gcargcwggttgtcccgtcgtctgctcgagtctggctgagcctggggcttttatgggcctcagaggggag
gaagtgcatgccgattggtccatgggtggccatgggtgggcccagaaaaagcaccacaagttcccactcc
ggtccgcaggactggcagnncccnctcccagccttcaggcnntccctggcttgaaggtggggcctcactg
gggacccgcccctttctgcccaggagcctgtctgcctcctgccgccgttcatggtgcccgggctgttcgt
gccgaggggcgcctgcaggccagcgccgagctgccctcagccccgccttggcctccctcccatgctcntc
ggcgtccaaagtctggagggggctgaggcggcagggggctggtgtgtcagcnctgcctcgagcgtgcgca
catctggctgggctgcggcagcgcccaggctcagcctcgactttgctccaagatcggagcgggtgccggg
agcagagagaggccaggcagtgggagcaggcacttctgagcctgcggagcgggcgccgggagnaaggaga
ggccaggcagtgggagcaggcatttccaagcctgtgggggcaggggggccttccccggcccccaagagca
cagagatgcccgggtccacagccgcggcttgggcggctgcagctgcacccgggagggtggggctcccgcc
tgcccccggcccccaagagcacagggangcccgggtccgcagccgcggtttgggcggctgcagctgcacc
tggggagctcctgccccaactcggaaggggcggggctcccgccggcttcgtggagcgcgcagccccggcc
atgcctccctgctgcagccggcgtaatggcagcggccactccagatgggccgccgctgccatcantakgt

>L1M4_5   Partial L1M4 LINE1 repetitive element 5' end - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>L1P5_5   Primate L1P5_5 repetitive element - a consensus.
ggaggtggccaagatggccgactagaagcagctagtgtgtgccgctctcatggagagaaatggaaggggn
gagtaaatacagcaccttcaactgaaacatccaggtacacgcattgggactaatcaagaaaacaacttga
cccatggagaacggagaaaagcaaggcaggacgacggcccacccgggagcgacacggagccaggggagcc
tcccccgcccagggaagtggtgagtgaatgtgcggccccgggaacccacgcttctcccacggatctttgc
aaccctcaggtcaggagatcccctcgtgaacccactccaccagggccttcagtctgacacacagagctat
gtggagtctcggcagagcagccgctcaggcatgcgtggagaccctggagccttagatacccgggcttccc
ggcaaaagtagctgcaactccagcaaagcgggaggttagacccccatacatacccctaggaaagaggctg
aatccagggggccgagcagtgayagtctgcaggccccacttccacrgcacctcacaggataagacccact
gacttggaatttcagcyagccacyggtagcagcgttgcacctmcctgraacrgagctcccagggggaagg
ggcgggctgccatctttgctgtttgggcgacttagccattccagccttcgggctttggagagtccaagcc
aactaggggcagaagsgatcccccagcacagmmcagcwgctctaccaaaacrtggccagactgcttcttt
aagtgggtccccgatcctattcctcctcgctgggcgggacctcccaaccggggcctccagccacccccgc
tggtgttytctagccgacagagatttgtaattctccctgggacggagttcccagagggaagggcgggcca
ccatctttgctgtttgrgcggctcagccgttccaaccttcgggctttggagagcccaagctgaccggggg
cngaaggaatcccccagcacagcacagctgctctaccaaaamgcggccagactgcttctttaakcgagtc
cccgatcccatttctcctcactgggcgggacctcccaaaccgggtctccagccacctcctgcakgtgttc
tcnggctaacagagatttgaaccyccctgggacgragctyycagagggaggggcaggcygccatctttgc
tgtttsrkarmcttmrctgttsawaccttcaggcwytggaraattyaaggcgacyagggkctrgancgga
cccccagcacagyacagcwgcyctaysraaawgtggccagactttttkttaagtaggtcccnaatcccnt
wtctcctcactgggtgggacctnccaaccagggtctccagccacctcctncaggtgnttttgggctggca
acaggtccgtacctccctgggacgaagctcccagaggcaggggcaggctnccatcttcgctgtttcgtag
ccttcactggtgatacctccaggtactagaaaatncgaggtgactanngactggagcgggcccccagcat
attrcagcagccctacggaaaagtggccagactgttatgtgggtscctawtcccatatctcctcactggg
cgggtcctccaggcctgggtctccagccaccacyyaccggggctgtcgngccagtaccarctcwgcaact
ccctggacagagccyccaggggaaactgaaagcctctctgccactgcctctgcagtggaactgcccttgc
taccctcagactaacgaaggagsaaagaccctaagtgccttatccacacctccaacaagctgcagtcgac
ccaaggagaggaggccagtctgtctcycacnggtcccacmcaccccccacwgcttgtcaccasrcaggra
acccctggcttgggcccacagcacagaccctccatcctgggctgactgcactgagcgattgctgacctgc
atctctctggggtggagcccccaggagacaagcaaaagaccctcggccacaaccactactaaggtccctt
cctccgckgcctccaagttggggagaaaacataaaccctgagatcaccccagagctgttatgngcagccc
ggnagtgccaagntacgatctacagccagcactcaagtgngagaggagnccacactttcatagcattgag
agggaacanggctgcaaangtgaggaaatacaggggagccacacgactgagcaagagcctaccaactgac
cactnnanctaagngtcacctactggatcacgccctaaagcttcaagaccaaaagtacttcacaaacata
gccccctgtgaaacaagagacaggaagtaagcttcaaataaagaccatgcacaaagcctcagcccagtga
aaacatccaaaaaggaagtctattgattgtattcaatgcacactgcagttaaaggaanatccacanacag
agatgagaaagaaccaacgcaagaactcgcgtaactcaaatggtcagagtgtcttatgtcctccaaacga
ntgcatagttttccaacaaaggttcttaactaggctgagttggcatgaatgacagaaatagaattcagaa
tatggataggaacaaagatcattgagattgaggagaatggcataacccaattcagggaaactaagaatca
caaaatcatgataaaacgatacaggagctgaaggacaaaatagctggtataagaatgaacctaacaaata
catctgatagagatgaaaaacacactacaagaatttcacaatgcaatcacaagtattaatagcagaataa
agcaagctgaggaaagaatctcagaaattgacaactggctctctgaaataagacagtcagacaatcacaa
agaaacaagaataaaaaggaatgaacaaaacatgcaagaaatatgggattatgtaaagaggccaaatgta
tgaacgactggcatcactgaaaggatggaggagaaagcaaacaacttggaaaacgtatttcaggatatcg
ttcatgaaaacttccgcaaccttgctagaaaggccataagtcaaactcagaaaatatggaaaact
>L186_5   Partial L1M4 LINE1 repetitive element 5' end - a consensus.
tgacatgtaangagcttggaagttggcactcccttcaacaacaacaaaaagntgaacaaacagaaaaatc
aatgacttttcttagatccataagagaagtgaggtcacagggcaaactgtcancctgaaatctggagaga
caggcgcatgcagagaatcacagcagagctctgctttcctgaagcagaagcctctgggagcacaagctgg
taggaaaacttaaatggtaattttggcaaattgctagaggctgagtgtggactagtttgagagtaagaaa
ttctcggnggcccagtctaggggaacctccacactttcgtgggctttacctccaggagtcccactagttt
ctcacagtgaagatccgagaaanttcgcttcacggctctggcagggggaggggaaaagcaatcattktga
aatacgcccagagtattctccgtaacaaactcttgccctacaggagaaaatactttgccagagccttatc
ctagctttagggaagggtaatcacccaactccagccccctctagccttcctgtctcacctaaagggagaa
aaaaagctaagaaacacttgtgaaggtcacagcccagggactcaggcccactaaaagactgagatttaat
cataggattatagaacgtttcccttccccmataccttaccaccacatcaacagggctccagtataataac
aatggattacagctgaaagaactgcaaaacmcagactctatttaagaaggagctnctagggaaacccaaa
gacaggagaggagacaaaaacaaggacaccggagtraagtttagcctctgacacctacagctacagcaaa
cagtaaacacagtctaactcttagccagataaacataaaacctcacattaaaggcctatttacttcagtt
ccttttacccagtacatcatgtccggctttcaacaaaaaattacaaggcatactaaaaggcaaaaaaaaa
aaacacagtttgaagagacagagcaagcatcagaaccagactcagatatgacagggatgttggaattatc
agactgggaatttaaaataactatgattaatacgctaagggctctaatggaaaaagtggacaacatgcaa
gaacagatgagtaatgtaagcagagagatggaaactctaagagaagaatcaaaagaaaacgctagaaatc
aaaacat
>L1ME1A_5   Partial L1ME LINE1 repetitive element 5' end - a consensus.
cagacttccgattccggtaatggtggagtaagcccctaccggaccaaccctcccgcagaaaacaactata
aaacctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaacaaaagcaggcagaaactg
gaggggagtcgacacttggaagaagggagcwgcacggagtgagttcccatttctgtggcttttagcctga
gagcaggccgcagttggtgcggcgtacagatggctaaaacwtcagtagaaaacccgcggtctttctggcc
tggagaaccagagaantgaatctagggcaaccacagccactggaaagagtggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactcaaagcagcccagctaaagacaaaagatctgaactgagactggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagataactgcctactaaaacaaaagaaacaacac
tcattagagaaaaataacagaatccagaatctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmacataagaagaaacagraaaaatggaatncatccttaagagaaaagaaaatcaaatccg
accctgagatraaccagatgttggaattaacagacaaggattttaaagcarctattataactatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtaagtgaacttaaagatagatcaatagaagttatacaa
tgtgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgttcgacaatatca
aatggtcnaacatanatgtaattggaatcmcagaaggag
>MER39   a consensus.
gggcattannnctgtaggggcagaaaggtgtgatnccttccctacccatcataagggtcacggcnnacac
tcctataataaaanayaggttagcaagagaaaagcataayagatttatttaatcaaagttttatgtgaca
tgrgagccttcagaaatgaagacmcaaakactcagggaaaactctatttttatgyttagatttgatgaag
aatgganagctgcgcagaaatgtgattrgacaaaaggggwatgatctaatggtmataractgrgtgtggr
aacccagcaaggcttgtctgttcgtattcttcttggtctmtctgtgcggcattccttcctcccgggtata
gggcgggaccccttctggaatgagggtcttatgacctacwatcagacgagataggtcagawaatttcttt
acggscagcycyaagacagaaaggcgggkrawgattagagggcnagagaaggtcagaaaatgannttctg
tttyctgaggnctgcttctgaggcttagagcgccccaacattntaacaaaagnctgtccntcacctttac
cgctctgaagctgttccaaagctgctacatgaaccaaggacaaaaagccanatanttcaacaaaagatat
ncttatngttttagtcactcaggaaacagcaaggcttataggagctgagaacccggaattatg
>MER39B   MER39B - a consensus.
aagcagaataatggagaaaagcatatacatttatytaacatgtatacactgtatacacgggagccttcag
aatgaagacccaaagatacagggaaaattgtccatttttatgcttaggttcaacaaagaatggacagccg
tgtagaaatatgactggacaaaaaggcyatgatcyaatgctaatgagctgagtggggaaacccagcaagg
cctgtctgtctagattcttcttggcttctctgagcacgcattccttccggntatagggcggggccctctc
tggaatgggggtcttatgacctacaatcaaacaaggtaggtcagataatttctttatggccagtttttac
acagaaaggtggagggaaagttagagtaatatttttaggttttatggctggctttgsaggaaaggrgttc
tggtttctatgacctgccttggggaagagagattctagtttctatggctagcctcggggaggggagaatg
ggactgagagacaggagggcgggagaaggtcagagaaaaaytttgcttctgaggccttcattttgcggta
ttgttttctgagccccaacca
>MER34   a consensus.
ccatggnagrgaaggaaaaattttwcctctaccctcttagagtttccggctgggcccgataattaaactg
acataagacagattaacaggagaaaagcatacaaatttatttaagtatgttttacatgtacatgggagcc
ctcataaggaaatgaagacccaaagaagcggttagagtcgaacgcttwtatactaggttggacaaagagt
agtaaattgtgaaaacgtgacaagacaaaggggtttgggctagggcggttcatcgtggagaagtgactag
gaagatragrgttagtttaacaaggtttgttcgtacagatttccctcggcctcgactccccgtctctgac
gataagaatgtttccttcctcctggtatagagagaacgtctttcacatgggagttttatctcctgctttc
aggaagaaaagaggaaggtcagagtgctcttcttgcayctgctgtttctcaagtgcctttagctcaaaat
aatccttatgccaaagtggcatattttggggtggcatattctgatctccttcawta
>LTR29   Long terminal repeat of endogenous retrovirus - a consensus.
tggccctctgaaggtttgctgaaaaatcaactgacaaaaggcagattaattartaggagaaaaggcatac
aaatttatttaacgtgtatacatgggagccttcagaatgaagacccaacttcccaatgaggtrcagaagc
ttatataccatcttgaggttacagaaagaatgggggcttggatcctggtaaaacaggttatgggaagggg
gagaagaggaattctattgaggggcaataaatgattactagggagaatgawtggatcttggatsrrggaa
cagaaattaacttgtaaatagttctctttggaatttaaatgatccttggagacaatgrtttgtgacaaaa
gtcattatcttgaaaaagggtctgttcaggtgtggttacattctttggtcttctttcctgyaatagattc
naatgagataaactcagggaggggaacaaaaaacaattgttctccttggtgggtctggactttaggcaga
taagggaacttcaacttatattngggagagacagtgggggntntggggggaggtcagagaaaccttgagg
cttcttcagttcagcatgtwcaaaacgccatattttggggtatcggtttctgagcccca
>MER98   MER98 repetitive element - a consensus.
gctccaggggtgggcacatgacccaggccgbaavtgcccagwcaccaatcagagatcccatcccctggcc
acgtgattggttcagggatgggcatgtgacccaagcyaggccaatgagartcaatcctgggacttttgct
ggaactattgggaaagagatactctttccactggggttgctaagctggtaggatgtaagcctggagctgc
tgggggccatcatatggaragagcctgcctgagaatgaagccaacacagagaaaagcagagccragagat
gtggagagagactgattcctgatgacatcatttgagcacctggatccagccatgcctgaactaaccctgg
acttttcagttactggccaataaattcyyttttttgcttaagcyagtttgagttgggttttgtcacttgc
aaccaaaagagtcctgactaatacacaggctgtctt
>MER68A   Primate MER68 repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttcggtgattcaccaggaggactcatgggactcagcata
tagtcgtactcatagctatgatttattacagtgaaaggatacaaagcaaaatcagcaaaggaaaagacac
acgggcggagtccggaggaaaccaggcgcaagcttccaagagtcctctcccagcggagtcacacaggacg
tacttaattcctccagcaacgagttgtgacaacacatgtgaaacgytgtctaccagggaagctcattaga
gactcagtgccccggggttttcaytgggagctggtcacaaaggcastctctgcctagcacgtaccaaaat
tccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagtttaggcacag
tgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgccagccaag
ggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttttctgcac
agacactctncagatcacttt
>MER68B   Primate MER68B repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttctgtgattcaccagaaggactcatgggactcggcata
gagtcgtactcatagctaagatttattacagtgacgtagtaaggatacaaagcaagatcacaaatggaaa
agacacacgggcggagtccggaggaatccacgcgcaggcttccttatgtcctctcccagcggagtcacac
aggacgtacttaattcctccagcaacgaaaatgtgacaacacatgtgaaacgytgtctgccagggaagct
cattagagactcagcaccccggggttttcagtgggagctggtcacaaaggcactctctgcctagcacgta
ccaaaattccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagttta
ggcacagtgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgcc
agccaagggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttt
tctgcacagacactctncagatcacttt
>MER58A   Nonautonomous DNA transposon; HAT superfamily.
caggggtcggcaaactttttctgtaaagggccagatagtaaatattttaggctttgcgggccatacggtc
tctgtcgcaactactcaactctgccgttgtagcgcaaaagcagccatagacaatatataaacgaatgggc
gtggctgtgttccaataaaactttatttacaaaaacaggcggtgggccagatttggcccatgggccatag
tttgccgacccctg
>MER58B   Nonautonomous DNA transposon; HAT superfamily.
caggggtcggcaaactttttctgtaaagggccagatagtaaatattttaggctttgcgggccatacggtc
tctgtcgcaactactcaactctgccgttgtagcgcaaaagcagccatagacaatatataaacgaatgggc
gtggctgtgttccaataaaactttatttatggacactgaaatttgaatttcatataattttcacatgtca
caaaataytcttcttttgatttttcttccaaccatttaaaaatgtaaaaaccattcttagtttacgggca
gtacaaaaacaggcggtgggccagatttggcccatgggccatagtttgccgacccctg
>LTR16B   Primate LTR16B repetitive element - a consensus.
tgtggtggccatgaaaatgtgcctctcagatctcctgctgcagggagcatagttgactgacggccccagc
tgctgtccyttggratccaccactgcgtttgcaccaaggccacgcttccctcaggctactcccagccagt
gactgagcacggcaggggtgctaatgcaggcccgttcctgsnagatgcgggactcctccgacgggcaact
ttggctcgaggactcctcatcagcctggttgaaactttcttagaactgcactgcagtctgaggctcttcc
tacccaatccttcttccttccccctctcctttcacaggtgtcagacctgcatcatggtccgaagtctctc
ctngcccgctcctgctccctccccttttatctttcacaggntttcccctaataaatctcttgcacattta
accctgtcttggcgtctgcttctcagaggacctgaactaacaca
>MLT2F   Interspersed repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttagctaggctgaactacatttcccagaattctcttccctgcatg
tgttttcgggttagggtgggccacaagagacattcttgcgrgagatttggaaggcagaagtgaagcagca
gccattttgcagctcacacacgttgttgctgatctgctggctcatctcgttggcgtaaggcagcagccgg
gcctgcagctgctccaccttcccctggatcctccttcagcttctccgactcctgggccaggtgcgtgtgt
agrttagyctctgtgaaagggtgccagcttctgcaggacacccacatcatcaaggttgaggcagcgagaa
ctgacatgggttccagtttatcctcgtgggttccagtttgttcctgctttcccccactttacatccatct
tcccttcctgactgcctgccctgtggacttcaagctccagcaycagacacagaracaacagccttacawa
gactgtttaaccagctcccacaattgggtaaggtcaaatccctataataaatcyctttatatttaatcac
tcatactagtggttctgcttctctgattgaatcctgactgataca
>7SK   Human family A3 repeated element DNA; 7SK RNA pseudogene.
gatgtgagggcaatctggctgcgacatctgtccccactgattaccagggttgattcggctgatctggctg
gctaggcgggtctcctcttcctccctcagccctccatgtgtgtacctcctgaagcggactggtcttcagt
caagggtagacgagtagctgtgctcccctgctagaacctccaaacaagctctc
>XTR   Repetitive element X-2 from human alpha-fetoprotein gene.
ttaatttgagagaaattaattattctgcaacttagggacaagtcatgtctttgaatattctgtagtttga
ggagaatatttgttatatttgcaaaataaaa
>XBR   Xba repetitive element copy A, from human alpha-fetoprotein gene.
aattgataggtcacgttctcactctatttgcctttaagggaagaaagcaatcaagttaatatgttttcct
tcattgtatagtatgtaactacggacactattagaggagggatttgtgtagcacttaggacattatactt
gataatttccaagggtctttctagatttaaaagtctgattctaacgtagtaataaaaataaaggcccaat
tttctctttaatattgcctgaagatattactctattattgcattaaaattaaacattcacacattgtttg
cactgctaaataaaattatgtaa
>L1PB1   3'-end of L1 repeat (subfamily L1PB1) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgaggatgcaaa
ggcgtaagaatgatacaatggactttggggactcgggagatcgggrgaaagggtgggaggggggtgaggg
ataaaagactacaaattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcacaaatcac
cactaaagaacttattcatgtaaccaaacaccacctgttccccaaaaacctattgaaataaa
>L1MA2   3'-end of L1 repeat (subfamily L1MA2) - a consensus.
ytaatatccagaatmtataaggaactcaaacaaatcaacaagaaaaaaacaaataatccmattaaaaart
gggcaaaagacatgaayagacatttctcaaaagaagacatacaaatggccaacargyatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaacyacaatgagatatcatctcaccccagttara
atggcttttattaaaaagacaaaaaataacaratgctggygaggatgtggagaaaagggaactcttayay
actgttggtgggaatgtaaattagtacarccaytatggaaaacagtttggagrttyctcaaaaaactaaa
aatagarctaccatatratccagcaatcccactrctgggtatatayccaaaagaaaggaaatcagtatat
yaaaragatacctgcactcccatgtttattgcagcactattcacaatagchaagatttggaatcaaccta
agtgtccatcaacrgatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgaratcytgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agycargmacaraaagacaaacaytgcatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtnggaggattggggggng
gkgrrgagggatggttaatgggtacaaaaaaatagttagaaagaatgaataagacctagtatttgatagc
acaacaaggtgactatagtcaataataatttaattgtacattttaaaataactaaaagagtataattgga
ttgtttgtaacacaaaggataaatgcttgaggggatggataccccattttccatgatgtgattattacac
attgcgtgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaat
taaaa
>L1MA5   3'-end of L1 repeat (subfamily L1MA5) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaataccgcatgttctcactcatatgtggaagctaaaaaagttgatctcata
gaagtagagagtagaatagtggttactagaggctgggaagggtagggrgaggggggratagggagaggtt
ggttaawggrtacaaaattacagttagataggaggaataagttctagtgttctgtagcaccgtagggtga
ctatagttaacaayaatttattgtatattttcaaatagctagaagagaggattttgaatgttcccaacac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacawtgtatac
atgtatcgaaatatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaa
>L1MA9   3'-end of L1 repeat (subfamily L1MA9) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgatctcacttatatgtggaatctaaaaaagtcaaaytcata
gaaacagagagtagaatggtggttaccaggggctggggrakgggggaaatgggaagatgttggtcaaagg
gtacaaagttkcagttatgtargatgaataagttctrgagayctaatgtacagcatggtgactatagtta
ataatactgtattgtatacttgaaatttgctaagagagtagatyttaagtgttctcaccacanacaaatg
gtaactatgtgaggtgatggatatgttaattagcttgaytgtggtaatcatttcacaatgtatacatata
tcaaaacatcacgttgtacaccttaaatatatacaatttttatttgtcaattatacctcaataaagctgr
aaa
>MSTAR   MSTa-Mammalian LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>MLT1R   MLT1-Mammalian LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MER3   Nonautonomous DNA transposon.
cagcgctgtccaatagaactttctgtggtgatggaaatgttctatatctgcgctgtccaatacggtagcc
actagccacatgtggctaytgagcacttgaaatgtggytagtgcgactgaggaactgaatttttaatttt
atttaattttaattaatttaaatttaaatagccacatgtggctagtggctaccatattggacagcgcag
>MER5A   a consensus.
cagtggttctcaaagtgtggtccccggaccagcagcatcagcatcacctgggaacttgttagaaatgcag
attctcgggccccaccccagacctactgaatcagaaactctgggrgtggggcccagcaatctgtgtttta
acaagcyctccaggtgattctgatgcatgctcaagtttgagaaccactg
>MER21B   a consensus.
tcaacacacaacacttctgtcaccaaacgtgtggrrrtttttccccacacacaaacaaktcttcagttct
gcggcggacaccarctgggtgtcctccaattcarttcagttctgacactawctacctrgagatagcgtca
gatcccacaggtttaagggctcagtcccacaagactgcccccacttcagatrccagtcgcaagtctrggt
tktcacccgtacttctgaccaactggctataaattgttcccacgacccctctttaggttcgattaatttg
ctagaatrgctcacaraactcagggaaacacttatatttaycggtttattataaaggatattacaaagga
tacagatgaacaaccagatgaagagatrcatagggcgaggtmtgggagagtccngggnncaggagcttcc
gtgccctctctggstnnrccaccttccwggcacctccacgtgttcaccaacccggaagctctccgaaccc
tgtccttttgggtttttatggaggcttcattacgtaggcatgaytgattacatcantggccattgattat
caactcaacctycagcycctctccyctccccagaggttggagggtggggctgaaagttccaaccytctaa
tctgccttggtctttctrgcgaccagcycccatccwgragcntnctaggggctgcccrccakgagtcgmc
tcattagmacaaaagrncrtynctattacccaggarattccaagggttttaggagytctgtgtcaggaac
cggggtcaaagaccaaatattagat
>TAR1   Human telomere associated repeat sequence, complete sequence.
gatcaacagtgaggaggtcccacaaggctaagtggggcaagtcggggacctaaggcagtagcaggaaaac
caaagaaaacaggcggagacttgagacagaggcaggaatgtgaagaagtccaaaataaaaatccctgcac
aggactcttaggctgttatcatgcactatcagcctactcctccctatttttgtacaataagctctttaca
ctgtatttcttttcaatgaagttatcttccatctttgtactgcctcttggtgaaaagctgtcttccaagt
taataactgggacatcagctctctgcagtaatagctccttttcagttttaatttgcagaactgatgggga
ttaataactggcgctctgactttaagtggtgcaggaggcggccagtaggggacgccagccgttacgccgg
gagcaagagggccctgcgtagtccccatctgcctgcatgtggcgtgcagccacgacaatggcagcaagag
ggcccggcagtgtgcccagctgccagcaggcgggtgtgctgccactataatgtgaggaagagggccctgc
aatgtccctagctgccagcaggcggcgtgccaccactatactgcgagcaagagagccctgccgtgccccg
gcgccagcagggggcgctggacagcactgtaagcaagagggccctgcagttgtcctagtcgccagtaggg
gacgcaatggcagagcaccgtgggcaagctggtcctgtagtgcccggctgcaagcagggggcgcccgaaa
cgggcttttcagattactcaggttccactcgtctctgcgccgccggggacgtgtgtctctgcgcgtgcac
cgcgccacccccgcgctccccgcccggcggcgcgcgactgtgcgactgcaacactccccgccaccctcag
cccagcgacgtgcgtctctgcgcctgcgccgcgcctcactcccgcccgctcagcgacccctcccttccgg
ggaggcgccggcgtgcgtctacgccctgcgccgcgtctccccaacagcggcgcgcctctctgcgcctgcg
ccggcgcgccgcgcctctctgcgcctgcgccggcgcgccgcgcctctctgcgcctgcgccggcgccccgc
gcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgc
ctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgc
cccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctc
tgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgcc
ggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgc
ctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcct
gcgccggcgcgccgcctttgcgagggcggagttgcgttctctttagcacacacccggagagcatcgcgag
ggcggagctgcgttctcctctgcacagacttcgggggtattgcgaaggcggagcagagttcttctcaggt
cagacccgggcgggcgggctgagggcactgcgagggtggagctgcgttctgttcagcacagacgtggggg
gcaccgtaaaggcggagcagcattcttctcagcacagacgttgggggtactgcctgcctttgggataact
cggggccgcatcgagggtgaataaaatctttcccgtttgctgccctgaataatcaaggtcagagaccagt
tagaacggtttagtgtggaaagcgggaaacgaaaagcctctctgaatcctgcgcaccgagattctcccaa
ggcaaggcgaggggctgtattgcagggttcaagtgcagcgtcagaactcaaatgcagcattcctaatgca
cacatgacaccctaaatataacaggcatattactcatggagggttagggttcaggttcgggttcgggttc
gggttcgggtt
>HERVL   Internal part of endogenous retroviral element HERV-L.
[encoded data, 5750 characters]
>HERVH   Internal part of endogenous retrovirus RTVL-H (HERV-H family).
[encoded data, 7810 characters]
aagaaggcaggaa
>HERVKC4   Internal part of human endogenous retrovirus HERVK(C4).
[encoded data, 5325 characters]
gggaggggggca
>MER60   5' part of L1M subfamily.
tgcagrttgctagtgccagagggagcaaagaattgtgattgtggattttaattgctggcagctccctgaa
ggactcacaagtctttttttctcggctgaagtggttcaaaaacatttaaaggcacatttgctggagcaag
ggacaacatgrgrcaagcaayagatagaccaaaaagcctaagaaggaagagmtgagaaataagatgcttg
gggaaawaagggctttgaaaagtccacatattcctgggaatctagaaggccatgcacatgtccagggctg
gacacatgctcagaaaagacctaagaaggccctaagctttcacctctggctgaccttnagactctgtaca
agcaggaagtgaaggctaaggcagagttgtaaactgccttggctgagtgttgaaggaatgccycaacaca
cagmcaatctgcaaagactaggagactttttttttgtgtttggtddtkttgttgttrttccaggtattta
aggaaayctctgtcaawyactagctgaccactaagctaaycgarcagagacttcagtggccacacatgac
aaagaatacagactttacaaaattagtttagaaaagtcactaaacaaacaayacaacagcamayaayaag
caacaacaacaaaccctggaaaggggagagaatctgatttccagagttgccacattatawtatttaaaat
gtccagttttttttttcaacarcaacaaaaattatgaggcatacaaagaaacaaagaaaagtatggccca
tacacaggaaaaagaaattaatagaaactatccctgaggaagcccagacattgracttactagacaa
>HERVS71   Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 5538 characters]
gtcatcctcaccacgccgatggctctgaaag
>L1M3_5   L1M3/4 LINE1 repetitive element 5' end - a consensus.
agagcaagatggcagaacagaatgctcnaacaattgcccccatyctryyccnccacaggaacaccaaatt
gaacaactatctacacaaaawagcaccttcataagaaccaaaaatcanntaagcgatcacagtacctggt
tttaacttcatatnactgaaagaggcactgaagagggtaggaaagacagtcttgaatcgccaacgccgcc
cctcccccatcccccggcagtggccgcacggcacggagagagaatccgcgcacttgggngagggagagcg
cagcgattgtgggactttgcgttggaantcagtgctgccctgtcanagcggaaagcaacancgggcagaa
ctcagccggcgctcatagagggancatttagaccagccctagncagaggggaatcacccatcccagcggt
cggaacctaagttccggcaagcctcgccaccgtgggctaaagtgcnntagggtcctaaataaacttgaaa
ggcagtctaggccacaaggactgcaattcctgggcaagtcctggtgctgtgccgagctaagagtcagtgg
acttagggggcacacgacctagtgagacacyagccggggtggccaagggantgcttgcgccacccyctcc
cycaacnccaggcagcacaactcgcagctccgggagagactccttccctccgcttnaggagaggagaggg
aagagtaaagaggactttntcttgcaantcggataccagctcagccatagtaggatagggcaccgagcag
agtnnwgaggycccnattctaggccctagctcccggatgacatttctaaacacaccctgggccagaaggg
aanctgctgccttaaagggaagganccagtcctagcaggantcatcacctgctgactaaagagcccttgg
gccctgaataatcagcagcgatacccaggttagyactcgccgtaggccttgggtgagantctgagacgtg
ctggnttcaggtgtgacncagcacattcccagctgtggtggctacggggagagactccttctgcttgaga
aaaggagagggaanagtaaaggggactttgtcttgcagcttagntaccagcttggccacagtggagtaga
gcaccaagcgggctcttagggtccccgattccaggccttggctgttggatggcatttctggacctgccct
gggccagaggagagcccactgccctgaagggagagtctcaggcctggcagcattcaccgcaagctgacag
aagagtccttgggctttaagtgaacattkgcgrtagycaggcagtacttnctgtgggcctgcggcggtgg
tngccatagggagagnctcctctgcttgtngaaaggggagggaagagtgggaagaactttgtcttgtggc
ttgagtgccagctcagccgcagtagaacagagcaccgggtagatttctaaggtttccgactccaggccct
ggctcctggatagcatcyctggacgtgcccggggccagagagaactcaccaccctgaagggaaggataca
agnctggctggctttaccacctgctgattgtagagtcccggggccttgagcgaacataagcagcggccag
gcagtggttactgcgggccttgggcgagacccagtgctgtgctggcttcaggtctgaccyagtacagtcy
cagtgrtggtggccacaggggtgcttgtgtcacccctccyccagctccaggcagctcagcacagagagag
agacngagtttgtttgrgggaaagtaarggaagagaacaagagtctctgcctggtaatccagrgaattct
tccagatcttatccaagaccacnaaggcagtacctctacgagtctgcaagagccacagtattactgggct
tggggtgccccctaatgcagatacggccgcagtgacaaaaaacttagatcacaacacycaagtcccttca
aatacctggaaagcyttcccaagaaggacgggtacaaacaagcccagactgtgaagactacaataaatac
ctaactcttcaatgcccagacacagacaaacatctacaagcatcaacaccatccaggaaaacatgacctc
accaaatgaactaaataaggcaccagggaccaatcccggagaracagagatatgtgacctttcagacaga
gaattcaaaatagctgttttgaggaaactcaangaaattcaagataacacagasaaggaattcagaatyc
tatcagataaatttaacaaagagattgaaataattaaaaagaatcaagcagaaattctggagctgaaaaa
tgcaattgacatactgaagaatgcatcagagtytcttaacagcagaattgatcargcagaagaaagaatt
agtgagcttgaagacaggctatttgaaaatacgcngycagaggagacaaaagaaaaaagaaaanaatgaa
gcatgcctacaagatctagaaaatagcctcaaaagggcaaatctaagagttagtgaccttaaanaggagg
tagagagagagataggggtraaagtttattcaaagcnataataacagagaatgtcccaaacctagagaaa
gatatcaatattcaagtaaaagaagnttatagaataccaagcanatttaacncaaagaagactacctcaa
gacatttawtaatcaaactcccaaaggtcaaggataaagaaaggatcctaaaagcagcaagagaaaagaa
acaaataacatacaatggagcnccgatatagtctggcagcagacttntcggcggaaancttacaggccag
gagagagcggcatgacatatttaaagtgctgaagaaaaaaaaaaaaactttnatcctagantagcgtntc
cagngaaaatatccttcaaacatgaargagaaataaagactttcccagacaaacaaaagctgagggattt
cntcaacaccagacctgtcctacaagaaatgctanagngaattcttcaatgtgaaagaaaaggacgttaa
tgannaataanaaatyatctgnaggtrcaaaactcactgataatagtgcgcagaaaaacanaatattata
acantgtaattatggtgtataaactactcttragtagaaagactaaaagatgaaccaatcaaaaatanta
actanaacaacttttcaagacatagacagtacnntaagatanaaatagaaacaacaaaaagtttaaaaat
tggnggacgaagttaaaatgtagagtttttattagttttcttnttgttnnttgrtttttttnaanttatg
taatnagtgttattatcagtttaaaatataggatattatttgcaagcctcatggtaacctcaaatcnaaa
aacatacaacggatacacaaaaataaaaagcaagaaattaaaacatatcaccagagaaaatcaccttcac
taaaaggaagacaggaaggaaggaaagaanaaagagaagaccacaaaacaaccagaaaacaaataasaaa
atggcaggagnaagtcattacttatcaataataacattgaatgtaaatggactaaactctccaatcaaaa
gacatagagtggctgaatggatataaaaataagacccaatgatcggtcgcctanawgwaacacacttcac
ctataaagacacakatagactgaaaataaagggatgaaaaaagatatttcatgcnaatggaaaccaaaaa
agagnaggagtagctatacttayatcaganaaaatatatttcaagacgaaaactataagaagagacaaag
aaggtcactatataatgataaaggag
>L1MA10   3'-end of L1 repeat (subfamily L1MA10) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctgggggragggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
ataatactggattgtacacttaaaawttgttaaaagrgtagatctcatgttaagtgttcttatcgcacaa
caaaaaaatggggaacttttggrrgtgatggatatgttcattatcttgattgtggtgatggtwtcacggg
tgtntacatatgtcaaaactcatcaaattgtacacwttaaatatatgcagtttttagtgtataattatac
ctcaacaaagctgttttaa
>L1MB3   3'-end of L1 repeat (subfamily L1MB3) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaacgccactgaactgtacgcttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaaaaaaa
>L1MB7   3'-end of L1 repeat (subfamily L1MB7) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctataattaaaaagacagacaataacaagtrttggcgaggatgtggagaaattrgaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactttggaaaayagtttggcagttcctcaaaaagttaaa
catagaattaccatatgacccagcaattcyactcctaggtatatacccaagagaawtgaaaacatatgtc
cacacaaaaacttgtacacgaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatccatacaatggaatattattcagccat
aaaaaggaatgaagtactgatacatgctacaacatggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggycacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctgggggraaggggaaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctaaaattagatagtggtgatggttgcacaactytgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaarctataa
>L1MC2   3'-end of L1 repeat (subfamily L1MC2) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatccaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catactcttaccatatgatccagcaatcayactccttggtatttacccaaatgaattgaaaacttatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaagaaatgaactatcgagacatgaaaagacatggaggaaccttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaactatatgacattctgaaaaaggnaaaactatgg
agacaagtaaaaagatcagwgattnctagagkgastrggarrgggagggaagaataggtggagcncaggg
gatttttagggcagcgaaactattctgtatgatactataatggtggatacatgacattatacatttgtca
aaayccatagaactgtacaayacaaagagtgaaccctaatgtaaactatggactttagttaataataatg
tatcaatgttggttcatcaattgtaacaaatgtaccacattaatgcaagatgttaataatagggtaaact
rttgtgtgggggagggagtatatgggaactctctgtactttctgctcaatttttctgtaaacctaaaact
gytctaaaaaataaagtctattaataa
>L1MC3   3'-end of L1 repeat (subfamily L1MC3) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgawacyactatatacgt
atannaraattaaacaaataagtaaatgtatkgtagatgatgggagccaggtttctcactgtcggagtga
ggagttacagataagcaaagggaggagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccgctgagagggccta
gaagcaacgacaccccagtagcaatgagcacacctagcacccagatcttggtttctaataccattctcca
ataaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatatacaagatgag
cctggaacatcttgcartgccagaaaataaggaagtgctcaaaaacacaatgatrggggtatgtcaaagg
gacacagragccaactgaaagagctcccaatggccaaagctggaacaatttgagcaacaaaataaattat
rgtagtattggattataacycaaagtataaaataaatatccatgagtccatactgatataaatgaatgat
taaataaataaataaattgagaagataaataagtctctnntgcagaagaatttcaaataatttatgtaga
tarcctnccctcaaggaagtggagcgtaactccccactccttaagtgtgggatggatatagtgacttcct
tccagaaagcatagtataggacggaaaaaaaagtaaatttacwgtagagaaacctgacaaacactacctt
agccaggtaatcaaagttagcatcaacaattgtaagtcatgttgatagyatatacccttgatatgatgtg
ataagaatggcacttcacctccgtggtcttcctcccaaaaacccataaccccagtctaatcatragaaaa
atatcagacaaattccaactgagggacattctacaaaatacctgaccagtactcctcaaaactgtcaagg
tcatcaaaaacaaggaaagtctgagaaactgtcacagccaagaggagcctaaggagacatgacaactaaa
tgtaatgtggtatcctggatgggatcctggaacagaaaaaggacattaggtaaaaactaaggaaatctga
ataaagtatggactttagttaataataatgtatcaatattggtttattagttgtgacaaatgtaccatan
taatgtaagatgttaayaataggggaaactggatgtggggtatatgggaactctctgtactatttttgca
actttcctgtaaatctaaaactatttcaaaataaaat
>L1MC4   3'-end of L1 repeat (subfamily L1MC4) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgaaactattttatatgt
attgtaggattgagcaaataagtaaacgcattgaagataatgggagccaggtttctcactgtcggagaag
ggagttacaaatatggaatgggggaagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccactgagagggccta
gaagcaatgacaccccagtagcaatgagcacacctagcgcccagatcttggtttctaaataccattctcc
actaaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatgtacaagatga
gcctggaacatcttgctrtgccagaaaataaggaagtgctcaaaaaatgatrggggtatgtcaaaaggac
acagragccagcttgaaggggctcccactggccaaatctgggacaatttgagcatcaaaataaataacgg
tagtaatggattataactcattgaataaaataaatatccatgagttcatactaatataaataaatgaata
aaagaaataaataaataagaragaaaggaaagytcttcttacagtagaatgccaactaayaaatgtagaa
ggaataaaataatagaaaaatcaccatttggcaaayaccacagtaataantgtttcaggcaagaaccatc
gatagatgctaaaattagtgggcgaaartttgatgagaaacgggatatttgcatagtctcaaagtatctc
yccacaagatatttattaattayaaagggaaaaatagtractttacagtagagaaacctggcagacacca
ccttaaccaagtgatcaaagttancatcaccaataatgagacaaattgacatcatgcgcytcctgatgtg
atgcgccgagaaggacacaacatcacttctgtgatattcytgccaaaaatgcataacctgaatctaatca
tragaaaatatcagacaaacccaaattgagggacattctacaaaataactggcctgtactcttcaaaaat
gtcaaggtcatgaaagacaaggaaagactgaggaactgttycagattgacggaagactagagacatgaca
actaaatgcaacgcgtgatcctggattggatcctggatcgagaaacggtgggagtttktayctataaagg
acattattgggacaattggcgaaatttgaataaggtctgtagattagataatagtattgtatcaatgtta
atttcctgattttgataattgtactgtggttatgtaagagaatgtccttgtttttaggaaatacacactg
aagtatttaggggtaaarggncatsatgtctgcaacttactctcaaatggttcagraaaaaaaatnnata
tayataaryagagaatgataaagcaaatgcggcaaaatgttaacaattggtgaatctgggtgaagggtat
acgggwgttctttgtactattcttgcaacttttctgtaagtttgaaattatttcaaaataaaaa
>L1MD2   3'-end of L1 repeat (subfamily L1MD2) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatagtttggcagtttcttataaagttaaa
catacamttaccatatgacccagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccatacmatggaatactattcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctcaagaacattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttatatarcattcttgaaacgacaaaactatag
agatggagaacagattagtgrttgccaggkgttagggatrcaggraggaggtggatgtgrytataaarrg
gtagcatgagrgaatytttatggtgatggaacwgttctgtatcttgaytgtggtgrtggttacacgaatn
tatacatgtgataaaattgcatagaactaaatayryryryrataagtacaagtaaaactggcgaaatctg
aataagatwnatggrttgtaycaatgtcaatwtcctggttktgatattgtaytatagttttccaagatgt
taccattgggggaagctaggtgaagaacacacgggatcccyctgtattatttcttacaattgtntgtgag
tktayaattatttcaaaataaaaagtttaatttaaaaa
>L1ME2   3'-end of L1 repeat (subfamily L1ME2) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctcaaaaagttaaa
cacgcacctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacttgtacaagaatgttcatagcagctttattcataatagccmmaaagtggaaacaaccca
aatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatattactcagcaat
aaaaaggaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgtatgattccatttatatraaattcwagaacaggcaaaactaatc
tataatgntagaaatcagaatagtggttgcctctggkgagggtraatgactggraagggrcatgagggaa
ttttctggggtgatggaaatgttctatatcttgatcggggtggtggttacacgagtgtatacatttgtca
aaactcatcgaactgtacacttaaaatctgtgcattttactgtatgtaaattatayctcaattttaaaaa
a
>L1ME3A   3'-end of L1 repeat (subfamily L1ME3a) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctacaaaagctaaa
cacgcgcctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacatgtacaagaatgttcatagcagcattgttcataatagccaaaaagtggaaacaaccca
gatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatactactcagcaat
aaaaatgaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgnntgattctatttgcataaaatacaaaaccaggcaaaactaatc
aatgntgttagaagtcaggatagtggttgttctgggaatagtaatgactgtaaggrarcatgagagggct
ttctggggtgctggtaatgttctgtttcttgatctgggtgctggttacacggctgtgttcartttgtgaa
aattcatyaagctgtacacttatgatwtatgcayttttatgtatgtatattatayytcaataaaaaaaa
>MER63C   Primate MER63C repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaggwaatgymtkgatttgtgtattca
catatataagtttattataaattttactgatataaaggacgtrtagcacacaatttacaaataacaataa
aatatacaatattctttattgtaaattccatatagccagttgattctcacagaatgctttcgttgatttt
tgcccaaactcttgtatccgtagccgaactatgtttgtaattgacgaacaagtgtagttcnaacatgaat
gttggttgatattttcgtttatgttaatgagtaagatgaaagtgaaacaacgaagacgtatgtcagaact
tcactcatttgtcaatgatgtgagtgacttctttgctgaatcggatggtagttttcaaacattagaagaa
tattttctcaatttttggtgctattcgcaatgtaacagctacagacatgacacacttttaagtttaatct
gcatcattaacattttctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctga
tttgtagcgtttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccagcgtgat
gtcactgaatgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagat
acaatagacgtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatga
gttttgagtatttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttc
tttgtttttaatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccg
atacgagccagctccagcacaccactgg
>MER65A   internal sequence MER65I belongs to the MER4I-group; subfamily MER65A.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER68A   Primate MER68 LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcatctgggaacttggatttcgggagggttcccaccattcccwkaactgataagagtggct
cactgtgcctaaactgtttgtgcaaacaatatggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacgtgctaggcagagggtgcctacgtgaccagcccccartaaaaaccctgggcactgagt
ctctaatgagcttccctggtagacaacatttcacatgtgttgtcacaactcgttgctgggggaattaagc
gtgtcctgtgtgactccactgggagaggactcttggaagcttgcgcctggtttcctccggacttcgcccc
atgcgccttttccctttgctgattttgctttgtatcctttcgctgtaataaatcatagccgtgagtatga
ctatatgctgagtcctgtgagtcctcctagcgaatcaccgaacctgggggtggtcttgggaacccctaac
aca
>MER69A   Primate MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcataggccccttc
caaggccctgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgt
ataagcttcaggccccacaaaacctggatctgcccctgg
>MER69B   Primate MER69 repetitive element - a consensus.
cagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccacaattggttaagactgctgtctctttccactccgacttcccctccatcacacttcccc
tcatgtcgggtggtattggagtggccgtgggcatttttgggatctggctaagggaaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtataggaatggcttccaggaayattcctactgcccactgtgccgactcacccagc
gtcgtgacmtgaggcacaggaccggagrtcgtatcgcgatatgaacgtgtcctacggcacctggcaccgg
aagtatgcgggtagtggaggagaaacaaggtttgaaatgtacagagccagaagctagtctgtggaaaatt
cttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgatgcctagycagagcaga
agttctctcctgtcagaaatatactcgataatgcagcgtatacaattataaatgcamcatgcatttattt
gcatttttggaagggaatcatgcgaaatagaatttatcagaantccttgtttgtagggcacagatctrta
gcagtactacaaacagtgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgctgatatga
catgaaatwctgacgttaacgaagataacasttcacttctaatttaccatgacaaaaaagacatcagtga
caaactggttactgagtgtcattaattctaagagyatttaagattagtcactgcacaagaaaacttgaaa
tgccctgaaatcttacagctcatatatgaaagaaacttgataggggtttccccaaatttgacaacaattc
taaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaacttttctaaactatcaataat
aaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctatagaaaat
attacaaaatcgttgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaaaartat
tatagaagtgtgtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatgtttgtg
gtatttgtcaactttttaaaatttgtaatttgttgcgatttcttttctcattctaaataaatattcactt
ttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgtataagct
tcaggccccacaaaacctggatctgcccctg
>MER74   Putative long terminal repeat of endogenous retrovirus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER77   Primate MER77 repetitive element - a consensus.
actacggggggaggtgtcaaattcaaaggtctccaagacmaccctcctgtttartgattcgctagaagga
ctcacagaactcagaaaagccgttatactcacagttacggtttattacagtgaaaggatacagattaaag
tcagcaaagggraaaggcacataggncagngtccaagagarmcaggcacgrgcttccagttgtcctctcc
cggcggagtcgtrcgggcagcgcttaattctcccagcaacgrtgtgtgacagcacgcatgaagtattgcc
aaccagggaagctcacccgagccttggtgtccagagtttttrttgggggtcggtnanataggcatggntg
accccgcagcatggctgaccttggtcttctcaggcttgagccncccaagcatggctgacctnagttactc
agtctycagcccctccagargtcarryaccgtgtagcctaaggcccccaccataaatcacattgttagca
trractgtccggtatggcccaaggccytcgcagataaacaaagayactyttatcaggcaggacattccaa
gggcttagaggttatctcccarrgcctgaggataamcgagggccaganctttctttgggcaaggttaatc
ctttactgyayaagaccaca
>MER80   MER80 repetitive element - a consensus.
caggggttcttaaccttttttgtgccatgggcccctttggcagtctggtgaagcctatggaccccttctc
agaataatgtttttaaatgcataaaataaaatacataggattacaaaggaaaccaattatattgaaatac
agttatcaaaatattaaaaaaccaaatttgtgatatagtaatatatgtgcttctttattaatgcattaaa
taacaagatctagcggcgggtctaataactaccgtaatttcgaagtagtgatgagcataaatgatatttt
gagatatctgcaacaactgtaatgtgatatgaaaatatctgtgatttctattggtgacaaagtcacaggt
actgctaatactactgtggtttgttgcctacattcataattgaaggaaatgctaaatttcagttagaggt
tagtgaaaataaagatgtaanttttttccccatccaagttcacggaccccctgaattctatccatagact
ccaggttaagaacccctg
>MER82   MER82 repetitive element - a consensus.
cagttgatcctcattatccacagtagttatgttctataaagtcaccgcgagcactgaattagcgaatact
gaaccatcgctcctagaggaaatacagagttaggttcctgcaagcctctggtcacaacattttcatcaac
cgatcaatatataacyttgttttatgtgtgtttctgtttaaagacnncttatttaatatatattgttgat
ttattaacactgaactcacagccaacagcactataactcatgcctgaatgaagcttatctaacacacata
ttttctccataaggtacatcacagccttcttgtgcttaggaacaccagacagcacttcagcactatgctc
ggggccattttaaacggcgaaatcaccaacaaaaagcacaaaaatgtgaaaaacgtggcactaaatagac
ctcgaaaaggacgcttgtttacggtatgagagctgaaacaagaaggcagagcgtcgccttgttcgacctc
agctgggaacgtgcacgtcgggcgactcgaatttttcgctgctctgcgcatgtntgcaaatgaccgngaa
agtgctncaagtattgattttggggttacaaataaattttagcgagtaggcgaattcgcaaatacggaat
ccgtggataatgaggattgactg
>MER65I   Primate MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>LINE2   Primate MIR2/LINE2 repetitive element - a consensus.
ctgtcattcattaccgntccttgttgcagtcatccatcgagcccggctcggtcactccctctcatttctc
gaagaktttrtctcctagntcaactgtcactctctcataataatantcctgtcataattcttggtgattt
caatatccacatagacgatccatccaatactctggcctctcagttccttgacctcctctctcccgtggtc
ttgttctcctctacccactctcagccactcactcccatggtcataccctagatcttgtcattactaataa
ctgcaactcctccataatctcaatttcaagcatccyactcttttaccacyacctcctatctttctagctc
actctctctggtgccctaactccaataatyctttgaccccaccgagacctmcaatccattgatctcatat
gcttttcactgtnccgtgtcctcttccctcctttcwttgctcagattccatggtcaatcattataatcac
tcccwtacanataccctcaactcccttgcccctytctcmctttgtcttacttrcttgncaaaaccacaac
cctggttaaatccaactntccgactaatttrcgcctgcacccgngcagctaaacatggctgragaaaaat
acacaaccatgctgactggtctcactttaaatttatgaccacgaacctcaagtgrgcccttaatgctgcc
aggcaattntactacatttccctagtccattcactctcccactctcctagatgactatttyatactttct
tnyttctcaaacctccaacayyyyytnccatctttactctcagctgatgaccttgcttcctatttcactg
agaaaatagaagcaatcagaagagaatttccacatgctcccaccaccacatctacccacctacctgcatc
tgtacccatatactctgccttccctcctgttaccgtggatgaactgtccgtgctcctatctaargccaac
ccctccacttgtgcactagatcccatcccctcttgcctactcaaggacgttgctccagcaattctcccct
ctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatataaacatgctgnnat
ttctcccatctttaaaaaacaaaaattctccctcgaccccacttccccctccagctaccgccctatttct
ctgctcccctttacagcaaaacttctcagaagagttgtctatactcgttgtctccacttcctcacctccc
gttctctcttaaacccactccaatcaggctttcgtccctaccactccactgaaactgctcttgtcaaggt
caccaatgacctccacgttgccaaatccagtggtcagttctcagtcttcatcttacttgacctctcagca
gcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacaccacac
tctcttggttttcctcctacctcactggccgttccttctcagtctcctttgctggytcctcctcatctcc
ccgatctctaaatattggagtgccccagggctcagtccttggacctcttctcttctctatctacactcac
tccctgggtgatctcatccagtcycatggctttaaataccatctatacgctgatgactcccaaatttata
tctccagcccagacctctcccctgaaytccagactcctatatccaactgcctactcgacatttccatttg
gatgtctaacagrcatctcaaayttaacatgtccaaaactgaactcctgattttcccccccaaacctgct
yctcccgcagtcttycccatctcagttaatggcaactccatccttccagttgctcargccaaaaaccttg
gagtcatccttgattcctctctttctctcacaccccacatccaatcyatcagcaaatcctgttggctcta
ccttcaaaatatatccagaatccgaccacttctcaccatctccactgcyaccaccctggtccaagccacc
atcatctctcacctggactactgcaatagcctcctaactggtctccctgctyccacccttgcccccctnc
agtctgttctcagcacagcagccagaatgatccttttaaaatgtaaatcagatcatgtcactccyctgct
caaaacccttcaatggcttcccgtttcactcagagtaaaakccaaagtccttaccgtggcctacaaggcc
ctatatgatctggcccccgcytayctctctaacctcatcttctaccactttccccctcgctcactctgct
ccagccacactggcctccttgctgttcctcgaacacgccargcwcgttcctgcctcagggcctttgcact
tgctgttccctctgcctggaacgctcttcccccagatatccacgtggctcactccytcacctcmttcagg
tctctgctcagatgtcacctyctcagagaggccttccctgaccaccctatctaaaatagcacacccyctc
ccccatcatgcccatytttcttaccycgctttatttttctycatagcacttatcaccatctgacayacta
tatwatttayttgtttgtttgtttrttgtctcctccacyagaatgtaagctccatgagggcagggatttt
gtctgttttgttcactgctgtatccccagcgcctagaacagtgcctggcacatagtaggcgctcaataaa
tatttgttgaatgaatgaat
>LTR10A   LTR from human endogenous retrovirus-like sequence (HERV-I).
tgttaagtacggtgagttctgagatcctctccaaagaaccagtatgtcagtatgttcagctcncctgttc
tttgttctccattttaaagtttaacttcagtatgttcagctcncctgttctttgttctccattttaaagt
ttaactcaacagttctaatcagtagttaacgcctgttcccctggtcacctgctccatcctgactcatccc
gggtcacctgctttgacctgagtcacccttagtcacctgctctgtaaccatccttcccgccaaactactc
accccgccactctggctcatacccctgctctctttaaaatagccaatcggaattagcttagactgtgcgg
tccaaccctagccaataggggaacgacacagcagtaggggctacctgcatcaggaataagaaccccttcc
cctcccttgtccaggtgtgctctcgccattgctccatctgcgagacgcacccttctatagaagtaaaatt
gccttgctgagaaaattaaatttatgtttgagtgctatttcttttgcggcaccgaaacgaaaattaaatt
tatgtttgagtgctatttcttttgcggcaccgaaactttatttataaca
>LTR16A   Primate LTR16A repetitive element - a consensus.
tgtgacggacatgraggtgcgctgcccagatcccccttcaagaacggaartyttattncccyagctgctg
ggagwgctgtcggcagacagccctcagctgtcagccccttcaggaattgcctcngctgaagagagccgcc
tcgcccaaggtcacgccccctccccggggcagcccacatccaatgactgrtcaatrtggaggtataaagg
cccggccctctcgccccaactcgggacaactctgaagggccatyccagctccagagctccccgtggggtc
ggctgaggcctttgttgcgactgcattgcagcccaacttctccctctgcccaatcctgcttccttccctt
cccttccacaggcgttgatcccaagggcgctccctaataaacctcctgcacgctaatctccatctcagag
tctgcttcccggggaacccaacctgcaaca
>MER74A   Primate MER74 repetitive element - a consensus.
tgtattaaccatgttttttattttctgtattcttgatgctttgacatctggggccttgctgaccctggag
ggactgcccctcccagggctagccaattcctagagatagcaaacgactcgcctgggagcgcgcctttcat
atgcaaaccaaccaatccagagcccacacccccaaccacctcctttatcgggctctcacactctgggcca
ctatccccctgccctaatcaccccagggccaggtaccagacaactagggacagcccctataccccagagc
ccgctgaaattattcaaactagccaatcctaagcctgcttaccctgccttgcccattccttcccatggaa
accacaataaaggctcttgcccacgttttcccgtcgctccctctgcctcctgaccgaccctggtgcttcc
ccgtgtggccccccgtggcgtggcgtgcccccttctcttgggawctgtgagtaacaaactatcttttcaa
tggcagtcgtctcctgatctgttggccttaccatacctgaataataataaaacctacattttaaaaca
>MER31A   a consensus.
tgacaaagattctctgcttgaccaaactttagtcaggctcctgaaccttctcctaggcccatctgtgcac
ttccttgtaaaatccagttttagcaaagaaccctgctaagtcagtttagcmagaaccccccacccttgat
atctgatcaccctcaatatctgatcgggttcctcatcctccaccatcccccaggtgatgtctgatcaccc
tggcctgtcttcagcaagaatcctgttaggtcggtttagccagaatccccctacccctgatgtttcctct
tagtaattttccatccactgacccctcaccctgctccttggctataaattcccacttgcccatgctgtat
tcggagttgagcccaatctctctcccccactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtcttccttaccatgctttaacaagtatcattgaataattttttctttaaca
>CHARLIE1   Autonomous DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgacatcatcgctctgatggctaatggaatgtgtgctt
gtgtattcttgtgttttctaaaatttttaaggtagtaggtttagggtataaatatgtaggttttcagaga
ttaactcagtttsttcttagcacttctaccgtgctcttactagctatcttcagttatacctgctataatc
tttgtaacctcattatcgtccaataaatcattattttraaatcctaaagttttcctcgwgcctatgtgaa
aacacaagaagcaagtactacttgtaaaacttgcttgcaataacattttgaaaatttcccaaatgtttaa
attttatcgacaacatatagaatttaatattttattctaaaataaaaatttatttataawgtttttccta
tatttaagggtggattgttggcttaaaaaagggagattagaagactcgctttctcaacccacagctgcam
catctatgtctaaagatgctgaaatggacataccagcaagttctctgattcctcatggaarggaggaatc
tactccaaagaaactgggcgaaactgtaaataaaaaacaaaaatatgataaaagctatcttctcagcttt
atagatgttaataatttaccttattgtgtcttatgcaacagaacattttcgaatagtattatggtgccag
ttaagttgcggcatcattttgagaccaatcattcagagtttaaagaaaaaggaattaaatattttaaacg
tagatgtgatgagctctttaaaagccaaaaattgtttgttgcagcttttcaaactagaaatgaaaaagcc
actgaagcatcttacaggataagttgccayattgcattggctggagaagcmcacacaataactgagagac
taataaagcctcgaacagttgacattgctgaatgcctgctggatgaaaagtcagtaaaagaaatcatagc
actgccactttccaatgatacgataactcgtcaaattaaagatttagctgcaaacatgaagaccgagtta
atatntcatctgcagaattgtacttttgccttacaaatggacgaatctacagatgtkgctagacttgctg
tgttgcttgcgttcgtctggtatcagcaccaactgatcatcgaagaacttcttttatgtgaattcttggc
aacaaacacaagtggtgatgaaatattcaaagtgttgaatgacttttttgaatctcatgatttatcctgg
aacaactgtgttgacatttgcactgatggtgcaaaagcaatggtgggtaaaactgctggcgccttagcac
gaatcaaggcagtggcaccaaactgtactagtagtcattgtattcttcaccgccacgcactcgcagtwaa
aaaaatgccagtttcacttaagaatgtccttgatgaagcagtaaaaattattaattttattaaatctcaa
cccttgagtacacgtctttttaatattctgtgtgacaaaatgggaagtacgcataaagcacttctgctgc
ataccgaagtacgatggttgtctcgaggaaaagcacttgtgcgattgtttgagttgcgagctgaactagc
tgcttttttcatggaacaccatttttacttgaaagaacgactgacagacaaactatggttattcagactt
gggtatttggcagacattttctcgaaaatgaacgaagtgagcctgtcacttcaaggaaaacaactgacag
tatttgttgccaatgataaaattcgagctttcaagcgaaaattagaattttggaaaacttgtatccgcca
ccgtgagcttgacagcttcccaatacttaaagacttttctgatgagatcggtggtgatattaacgaatgt
gattttttgatattgtataatgaaatgtgtcaacatttggaagatctgcataactcagtgaaccaatatt
ttccaaatgaccaatgcatgatgttacaaaatcatgcatgggtaaaagatccattcaaagtgcaagatag
accaatggattttaatgtaacagagtatgaaaagttcattgatatggtttcagattccacattgcaacta
acctttaagaaactaccacttgtcgagttttggtgtagtatcaaagaagaatatccacaattatctgaaa
aggctattaaaatactcctcccttttccaactacatatctgtgtgaggccagattttcttcatatacttc
aaccaaaacaacatatcgcaacagattgaatgcagaagcagatatgagaatccagctgtcttctattaag
ccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcactaaatttttttgttttgga
aaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggtttattattttwaaatgaat
waataaatattttaaaaatttctcagttttaatttctaatacggtaaatatcgatagatataacccacat
aaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtcctgagaccaaaaagtttga
gaaccgctg
>CHARLIE1A   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactgtgttgacatttgcactgatgg
tgcaaaagcaatggtgggtaaaactgctggcgccttagcacggatcaaggcagtggcaccaaactgtact
agtagtcattgtattcttcaccgccacgcgctcgcagtnaaaaaaatgccagtttcacttaagaatgtcc
ttgatgaagcagtaaaaatkattaattttattaaatctcgacccttgagyacacgtctttttaatattct
gtgtgacaaaatgggaagtacgcataaagcacttctgctgcataccgaagtacgatggytgtctcgagga
aaagcacttgtgcgattgtttgagttgcgagctgaactagctacttttttcatggaacaccatttttact
tgaaagaacgactgacagacaaactrtggttattcagacttgggtatttggcagacattttctcaaaaat
gaacgaagtgagcctgtcacttcaaggaaaacaactgacggtatttgttgccaatgataaaattcgagct
ttcaagcgaaaattagaattttggaaaacttgtatctgccaccgtgagcttgacagcttcccaatactta
aagacttttctgatgagatcggtggtgatattaacgaatgtgattttttgatattgtataatgaaatgtg
tcaacatttggaagatctgcataactcagtgaaccartattttccaaatgaccaatgcatgatgttacaa
aatcatgcatgggtaaaagatccattcaaagcgcaagatagaccaatggattttaatgtaacagagtacg
aaaagttcattgatacggtttcagattccacaccgcaactaacctttaagaaactaccacttgttgagtt
ttggtgtagtatcaaagaagaatatccacaattatctgaaaaggctattaaaatactcctctcttttcca
actacatatctgtgtgaggccagattttcttcatatacttcaaccaaaacaacatatcgcaacagattga
atgcagaagcagatatgagaatccagctgtcttctattaagccagacattaaagagatttgcaaaaatgt
aaaacaatgccactcttctcactaaatttttttgttttggaaaatacggttatttttcataaaaatgtta
tttatgttaacatgtaatgggtttattattttwaaatgaatwaataaatattttaaaaatttctcagttt
taatttctaatacggtaaatatcaatagatataacccacataaacaaaagctctttggggtcctcaataa
tttttaagagtataaaggggtcctgagaccaaaaagtttgagaaccgctg
>CHARLIE1B   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgtcgcaacagattgaatgcagaagcagatatgagaat
ccagctgtcttctattaagccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcac
taaatttttttgttttggaaaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggt
ttattattttwaaatgaatwaataaatattttaaaaatttctcagttttaatttctaatacggtaaatat
cgatagatataacccacataaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtc
ctgagaccaaaaagtttgagaaccgctg
>CHARLIE2   DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacatgaagactttccaaggggtatgcgggca
cggatagttttaagggaatcaatttccagatcctcarcttccatatgtactctttcctaaaactgatctg
cctgagaacgcgcctgtggcgagggcctgccgnctttcccacttcccctttcacgatcgcccttctccca
ctttacaaaagaaaggcatacctctcacccatcccgaatcttactatggtgcattgccctggggtgtaaa
aacctccggggcaccaaacaaagggacaattcgaaatactggtgttggtgaagcctcctttaatcaaggc
accataarcccgnngtacagttttatgtcttccctggctttayaaatatttctgttaagggtaaagcatg
atgttggaacaaggtactttggcycatgttggggtgttctgaattcagatatatcntagagtggggtggt
gggagtgatgacgatttttncttgacgatgttgcttcttccatcnctattnacaaagaatacattgctcc
tgaggaagagtcctgagagcaaagcaaagagaacattgntaagaaatggcgaagatggcagtgcnttatt
tcatccaggtgacaaactcatggcgaggtctatctatctgakagttggaatattcaagatwtgkaaaagg
cattctgggaaataccaatcngctacgaagcatgcctcctctgcactttcaccattctcagtantgagaa
agagcttggtgagtactctcattcacctgcgtcttagtctgkgtctcagttgcatattttgcatgatttc
aaggmggtggaggcgaaaagctctgcaattacttctaacagatcaacattacattttcaagtaaaaggaa
catatattggaggtaagttmrtgtatkctattttcttgaacatttattcagattmataggagaaacattt
tcattaacttttgccaaagatttctagatagtgtaaatatatttttctatttaggcamaagtctcctgct
cactgtcactcatgaacmacttctctgttcatttattnattcctaccatatacttactagagttagatta
anttaacaggaatatgttgcagattctactgtaantaatgcacwtaatagcagtcagtaatataactttt
gtaaacccatanttattaatgatccaatancttctctctcnttttgctgwcgatttccacaaagtagatt
aaactgtactcttaaaagcagaacattcacttatgtacgagtgcaggacagaatgttccaaaatgcaats
tagaatgcgatgcccwgaacttcagaaaaccagcttcacttaattaggattaatttctcccgctcggang
ctaatatactgttttanttctgtcaaatgnatnattataagtaataatttttnacaataacgaaattant
antatatacatgaatannctcaagtgtccgtccctctgtcatatttttaaaatgcatttngagacgttct
taaaaaatgaaatwtggtattgtntataggtctctgttcgtagtcgakgagamaagtccccaaatncaca
atttacaatttttcgwtttttccaactccttccatgtatattgaggtccataagcaaggtgcctctaagt
gaaagagtagcaggnataattaatagtcatttgataagtcttggtgaagccttttgggtatacttcctag
aaactgagaaagtgaatgactctaatgactgggtaacaaatccttttgcaagtcaggtggtttccaattc
tttgctttcaacaaaattgaaggaggacctaatcgagttgtcagctgacagatcattaaaaataattttt
gatgatagatcaytatgtgatttttggcatataactcggaaggagttcaaagaattgagtgacattgcta
taacaaaactccttccattcccatctacttatttatgtgaacaagrtttctcagcgcttacatctataaa
aatgaaaaataggaatagaattgatgctgaactctgtctcattctagcaataagtaatattcatccacgg
atacatgaactaattggggaaacaaggccccatccatctcattaagagatgcatttccaataaaatttta
ctttttatgtttawtatttatcaaaatttgtaatatgtttatgttgttttgatcaattgtatattaataa
taattgtaatgataactcaatccagaagaaaawttttaacacttagagccttatggtcanarkaaatata
aaaaattaaatttcaatttatatacatatttttgttgcagagaagtatgatagggtgatcaataaaagac
tttcaagcataaaaatatattacattaggataaaattctgtgggggaagtggaatggaaatacgagttca
aggagaaaaagagaacaatgtaaaatttccgactgttaaagaagagcttgctcatgtattttttaaatgg
atgatggtgggtatcaaatcgctatggtatttagattccattggatacatttaaaagagtgatgtaacag
ttttattttaaaatgtcaatatttacaatatgccagaaattacatcctttgcaactatttaaacttatga
tgaaaaattttagatgtcaacttaaaaatgtgcgagggrgtacatagtttttcaaaattcttttagggga
tacgcaagcaaaaawgtttgaagaccactg
>L1MD_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggca
>LINE2B   3'-end of L2 repeat (subfamily b) - a consensus.
tcccccttgctcactctgctccagccacactggcctccttgctgttcctcaaacacgccaggctctttcc
cgcctctgggcctttgcacatgctgttcyctctgcctggaacgcccttccccwctccttcancctggcca
actcctactcgtccttcaggkctcagctcaratgtcacctcctccaggaagccttccctgacttcccagg
ccgagttaggtgccctcctctgggcccccccggtcctaccctgccactctgggttatmattgtctgtkng
cangtctgtctcccccactggactgtgagctccgcgagggcagggactgtgtctgtcttgttcaccactg
tatccccagcgcctagcacagtgcctggcacatagcaggcgctcagtaaatgtttgttgaatgaatgaa
>MER92C   Primate MER92C repetitive element - a consensus.
tgacaatgcwgaactttacctgagccctgtgctcccggaaaacagcgatggttaagaaatccccccatcc
ttttgtgttccnagaaacggcttaccgcaaagaactacccttccctatatgacttaaataagactctctg
ncccttctttctcacgacttccataagatcannnatgattccttncctgnnaagaccaaacacagacctt
tccccttttgcctgaacccgctgacaaggccagacacggaccctccaacttcctattctttgtttcataa
atgattagctgagattagaagngtctgtccccctgaaactagctagacacagagataaacatttcctgtt
cagctaaccgagacttcccctgattgcaaaacaaccccccctgtaaatctccccacntgaaacctatcta
ccccttcctataaaagtccaaggcaaaaccaccctgccgagacacttcatagtcttcggatcttggatgc
tctccctattgcaatagcctgaataaaatcatctccttamttgtctagtgcattttgtctttca
>L1P_MA2   Primate LINE1 subfamily consensus; L1PMA2 subfamily.
[encoded data, 7739 characters]
tctcatgtaccccataaatatatacayctattatgtacccayaaaaat
>GOLEM   Autonomous DNA transposon; POGO superfamily.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagtatg
ccgtgttagaccggcagcagccacatgcatctcgtgtttaccgcgtctcttgattgcatcattttctctt
gtgcttgatttaatctcatgtgttttgttcatcacggctcctaagcgttcaaaatccacggctaatgttg
ccagtaagaggccacgtcgagtaattgagctggaaacaaaattaaaagtgattaaggaccgccgaaggtg
gaaaatcagtgatggttattgctcgccagacaggtatgtcccattcgaccatagctgccaccttgaagaa
caagagcaaagtgacagaaactgttaaagggtctgcttcatcgaaggcgacgagaccaacaaatttgaga
agtgccaacatcagatatggagaatatctgctaatgacctggattgaaaaccagacacagaaacatagct
ctctcagcaccacgacgaccacggccagagcaaaagggatatttttgatgttgaaagaaaaggctggacc
cgactgtgatatcgaatttactgctagttccgggtggtttaaatgattcgagaatcgttatccattacat
aatgttaacgtgactgctgagtctgtgagggctgacgtgaaggcagctgaagagtttttggaaactctag
atgagtcgtggagaagaaatacttgccagagcaaatcttcaatatggaggaaacctccctattctggaaa
cagatgcctgaaaggactttctgtcataagggggccaagtcaatgccaggtttcaagggttttaaggaca
ggaaacggtcttgctttggggcaatgttgcaggctacaaattgaagccctttgtgatccgacacagtgaa
aaccccagggccttcaagcatatcagtaagcacacgctgccagtgtactacaggagcaataaaaagtcat
ggatgatccatctcctcttccaagatgccctcctgaattgctatgccagagaaatggagaagtactgttt
ggggaataacatacctttcaagattttgcttattgttgataatgctcctgcacatcttccttttactggt
gatcttcatcccaatttcaaagtggtgtttctctctccaaacaccacctctttgatccaatggatcaagg
aattatagcagctttttaaaggcctactaccagagaagggccttcgcccaggttatcactgtaactgagg
aagacactgatgcaattctggaaggattacaacagccaagactgcatcaagaaccttgcttgggattggg
gtgatgtcaccaaggagtgtatgaatggcatctggaagaagacactcaagaggtttgtccatgacttcaa
aggatttgccaaggatgaggaggttgcaaaaatcaacaaggctgtggttgagatggcaaacaactttaac
ctgggtgtggatgaggatgacattgaggagctcctagaggtggttcctgaggaattgactaatgaggagt
tgttggaactggaacaggaatgcatagctgaagaagaggcaagagaaaaggaaactgcaggagaagaaga
agaacccccaagaaaattcacagtaaagggtttagcagaagcttttgcagacctcaacaagctccttaaa
aagtttgaaaacatggaccccaacaccgaaaggttttcattaatagagaggaatgttcatggtgcattat
ctgcttacaagcaaatctatgatgacaaaaagaaacaaaccaagcaaaccatcatggacatatatttctg
aaaagagtgacacctcctcaagaagagcctcaggcaggtccttcaggagatattccagaagaargcatcg
ttatcataggagatgacagctccatgcatgttattgcccctgaagaccttccagtgggacaaaatgtgga
ggcggaagacagtgatattratgatcctgaccctgtgtaggcctaggctaatgtgtgtgtttgtgtctta
gtttttaacaaaaatnttttaaaaaataaaaaaatwaaaaatttwwaaatagaaaaaagcttatagaata
aggatataaagaaagaaaatatttttgtacagctgtacaatgtgtttgtgttttaagctaagtgttatta
caaaagagtcaaaagttaaaaatgcaaaagtttataaagtaaaaaagttacagtaagctatggttaattt
attgctgaaaaarwwwwwwwwwwwwwataaawttagtatagcctaagtgtacagtgtttataaagtctac
agtagtgtacagtaatgtcctaggccttcacattcactcaccactcactcactgactcacccagagcaac
ttccagtcctgcaagctccattcatggtaagtgcyctatacaggtgtaccattttttatcttttataccg
tatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattgcctacagta
ttcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatagcctaggtgt
gtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaattgcctaatg
acgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>ZOMBI   Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>ZOMBI_B   transposon - a consensus.
caggttgagcatccctaatctgaaaatccgaaatccaaaatgctccaaaatctgaaactttttgagcacc
aacatgatgccacaagtggaaaattccacacctgacctcatgtgataggtcacagtcaaaayacaatcaa
gactnnncnagcnnctncngttgctnttnctgccagncaacnacagnttgtgcacctngntggcaragan
actgacacatttgctttctkatggttcagtgtacacaaactttgtttcatgcacaaaattatttaaaata
ttgtataaaattaccttcaggctatgtgtataaggtgtatatgaaacataaatgaatttcgtgtttagac
ttgggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaatctgaaatc
caaaacacttctggtcccaagcatttcggataagggatactcaacctg
>LTR33   LTR from human endogenous retrovirus-like sequence (HERVL33).
tgtgctggatatcttctgtttgcccctccagatccactctccacccttctccaccctgctctgtgccccg
ggaggctgacctctatggactgcatcamcgggctcccttgccctctggcttctggttgggtttggccaat
gggaggcactggcaggagattggagggtggaaggagagwgagatcggggtatttattccccyggctccct
ccctgctgggctgcggtttggcagtggctgcgttcctctaccgaaggccacagctcctgtcgggcagccc
tctccttgtagctacagctmcagctctctctgggttccggtaacmgctccctccccttgccccttcaggc
ctaggggtggtaacagctycccgctgttgctagccccggggtgcttcaccatcccttgttggtttccctt
aaccctgcccacacctttgtaaatagtcccttcattaaactctcctcaattactccatttgagtgtgcca
tctgtttcctgccgggaccctgactgataca
>L1M3A_5   Primate L1M3A_5 LINE1 repetitive element - a consensus.
gagtgawgtcagcaagatggcagaatwggaggtctcaggctccagtctccctcacagaaagtccgactag
caactattcacagacaagaacgcctttgtgaaaaatgccagaacttggaaatgagrctgagacanctncg
tggancacagaaacgaataaaaaccacattaaaagggtaagaggaaccgtctcactttaaccacgttgcc
cctmagtcggcacagtrccacacngagagaawttccccgggcctacagtttctacagtgggaaaagagag
ctkgaggtggacatccagcttccctagcattccaagatgcttcccaggargcccactcynatctcacctc
atgaggaaacactgagggaaatggcanggctagaccgtctggagtcaggtagaaacaaaaaaagggggca
nagctcatagtaaccagtgcacggatcttggtggtagctctgtattcctgccagcggtggcgcctgatca
gaggtaccagccaatggcatagcccacccgcaaagctgagctggtcgctcccagaagcacggtgagaagt
tcnacccggcttgagtccctagatggccagcctccaaacccagccttagascctaccccagngctccacc
caggcagggagatacacaccacmatgtatttcagcagagcacagaggctagacctgcctgacccaggagc
ccaaacagtgactcggcccagcctcaaagcccaccccaaggacccacacaggcaggaaggcaaacgcgga
ttgtgcakctctaccagggcaaagtgccagccaccgtccattcstwncagcaattccatctaaccttgca
gcctaggggctggccctgcccaactgcagagctsaaacagcggctccgcctggccasagagtmtaccccg
tggcycagcccaatagacgcgactncaacgtccantcagcggctccgcctaannncagagcccagccagc
agccccgcctgacctcagagcmcaggcantagcccgnccagctagagaacccaamagcaagcactgccta
cccatggttattaccagctgtcccatccagaatcacaagctggactgaataatgaaggtctwttcctgnc
gaagaacacctgtaaaagccagaagaggtggctgcctmgtcaaatgcatggataccaatgcaaggacgca
agggttacgaagaatcaaagaatcatgacacctccaaaataaactaacaaagctccaacaatggamccta
aagaaataaagatctataaaatgactggcaaagaattcagaataatcctcttaaagaagttcggtgagct
acaagaatacatagatagaaaattaaataaaatttggaaaacaatacatgaamaaaacgaaaagtttgac
aaagaaatagaaacgawtattctaaaacccaaatagaaatcctagagatgaagaacacaattgctgaaca
aaaaaattcaataaaaagcttcgacagcagactcaatcaagcagaagaaagaatcagtgagctcgaagac
agaacatttgaaattatccagtmagaggatcaaaaataaaaaaaatgaaaaacagtgaagaaagcctata
ggaattatgggacaccatcaagaaaactaacatacgcataatagaaatnccagaaggagaagagaaagaa
ggccagaaagyatattttaagaaataatgactgaaaacttcccaaatctggggaaagatgccagcatcca
ggtacaagaagcaca
>L1M3D_5   Primate L1M3D_5 LINE1 repetitive element - a consensus.
gagtgacatcagcaagatggcataataggaagccctggacctttcttcccttcacagacacactgattca
gcaacaattcacggaaaattacctttgtgagaaatgcagaaactagttgagaggctcctgcaccctgggc
gagcgcgaaaccagacccacatcaaagccggtagggagattcaggacaccctctcatcgaagtccctccc
cccggcwcagcgcmgtgcgatcggaaggaaaaaacccccaactcccggcttctcccaggggaggaaaaga
gttggttcgcacgtcaagtgccccracttttccgaggggctacccagaggactgtcttctgtcttgccwg
tctcrgagctctgataggcccggcataatctagacacccgggggagaacagagatggtggtttgggctgg
tagatgccatagctnctcacccctgctcagcacagaacaagnagatgaaaacccccagntctcagctttc
ccctgaggaggaaaanagttgaatggactggaaaacagaattgaatggagcatccaacaatccagctttc
tgggagtgcctaaggaaccgattgcatttcaacttgtcgcgctacgctgatangattnancataccctan
atgctcggcgactgcaaagaacaaaaancaggttggactagtacgaaggtttgagaggnccccaaaatct
ctggctaggctgatcggtgaaggtcttctcctgcataaggccagtctgtgaagactgagagaggtggctg
ctttgtataatgcgcagacaccaatacagagagtcaaggaaaataaagaatcagggaaanatgttccaaa
caaaggaacaggataattttccagaaactgaccctaataaattggagttatanaatttacctgacgaaga
attcaaaacaattgttntaaagatgctcatgaataacatgataaagatgctcaccaagatcaggaaaaca
atacatgaacaaagtgagaatttcaacaaagagatagaaaatgttaaaaagtaccaaacaaaaatcatgg
agctgaagaatacaataactgaactgaaaaattcactagagaggttcaacagcagactagatcaagcaga
agaaaggatcagtgaactcaangacaggtcattcgaaattatcgagtcagaggagcaaaaagaaaaaaga
atgaaaaagagtgaagaaagcctaagggatttatgggacaccatcaagngaaccaanatacacatcatgg
aagtcccggaaggagaagagagaganaaaggnccagaaagcntattcgaagaaatagtgactgaaaactt
cccaaatctggggaaagaaatggacatccagatncaagaagccca
>L1MB6_5   Primate L1MB6_5 LINE1 repetitive element - a consensus.
ggtaatgtcagcgaaaatggcggagtaaggamctccgaaaattcactcctccataaaagcaatgaaaaca
ctggcaaaaattgtcagaatcaactttttcagaactctggaaattaaccaaaggcttacagcaatctagg
aagtgtttattcaagaaaaayagctgaatctcwgtaagaacagcgagctttgtggtattttaacttgccc
tantcccatcccccwctctccagctcagcagtagccttgaaaataacagcttatattatggtgaaaacca
gcagccaccggagkgggcagaacgggtttggagcttctcaaaagycncattcccagggaattgtcattat
ttgacctgtctggcggctccctggaagactccattcamagggcttgtctttatttgacctgactcagagc
tcactcagtgcgaamagcattatacctgggggcatttgttgaaaacawttagaggcaawtgtttaacacc
acagctgcctgaggcagtgrataacagttggggcaaacaagaggctgaccaaaaagcttaaaaggaaaag
ctggggaatgagatgtccgnaggggctttgaaaagctccaacatattcctgggaatctagaaggccacgc
gcatgcccagggctgtacacatgctcagaaaagacctaagaaggccctaagctctcacctctggctgacc
ttgagactctgcacaagcaggaagtgaagactaaggcagagttgtaaactgcctggctgagtgttgaagg
tatgccccaacacacacacagaaccccttggcaaagamtgggagacttgttggttcmaggcatttaagga
aatctctgtccaatcattagctgaccactaagctaacngagcagagacttcagtggccacacatgacaaa
gaatacagactttacaaaattagttcagaaaagtcactaaacaaacagcaacaanaacacaaaagagyaa
caacaaaccctggaaaggagggagaatctgatttccagagttgccacattatattatttaaaatgtccag
ttttcaacaaaaaattacgaggcatacaaagaaacaagaaagtatggcccatacacaggaaaaaaagcag
ttaatagaaactatccctgaggaagcccagacgttggacttactagacaaagactttaaatcagctattw
taaatatgttcaaagaactaaaggaaaccatgtntaaagaantaaagaaaaatatragaacgatgtctca
ccaaatagagaatatcaataaagagacaaaaattataaaaaataaancaaatagaaattctggagttgaa
aagtacaataactgaaataaaaagttcactagaggggtacaacagcagatttgagcwggcagaagaaaga
atcagcgaacttaaagataggtcaatcgagattattcagtctgaggaacaaagaaaaaagaatgaagaaa
aatgaasagagcctcagagacctgtgggacaccatcaagcgtaccaatatatgcataatgggaatcccag
aaggagaagagagaaarkggcagaaagaatatttaaagraatagtggccgaaaatttcccaaatttgatg
aaaaacatywayctwcayatccaagaagctcaataamctccaagtaggataaactcaaagagatccacat
ttasatgcatcatagtcaaactgctgaaaaa
>L1MEC_5   Primate L1MEC_5 LINE1 repetitive element - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>MER91B   Primate MER91B repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
catcacagatttgtataatgacaattttccaacagatggcagtaaagtgtcttgaggaaggggcgccttt
ttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>GOLEM_B   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagnctc
aggcaggtccttcaggagatattccagaagaargcatcgttatcataggagatgacagctccatgcatgt
tattgcccctgaagaccttccagtgggacaaaatgtggaggcggaagacagtgatattratgatcctgac
cctgtgtaggcctaggctaatgtgtgtgtttgtgtcttagtttttaacaaaaatnttttaaaaaataaaa
aaatwaaaaatttwwaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtaca
gctgtacaatgtgtttgtgttttaagctaagtgttattacaaaagagtcaaaagttaaaaatgcaaaagt
ttataaagtaaaaaagttacagtaagctatggttaatttattgctgaaaaarwwwwwwwwwwwwwataaa
wttagtatagcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcac
attcactcaccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaag
tgcyctatacaggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagat
acacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttgt
agcctaggagcaataggctataccayatagcctaggtgtgtagtaggctataccatctaggtttgtgtaa
gtacactctatgatgttcgcacaacgaaattgcctaatgacgcatttctcagaacgtatccccgtcgtta
agcgacgcatgactg
>HAL1   Primate HAL1 repetitive element - a consensus sequence.
ccctatagtgaagcccacmacctggcaagccccacccacgcactcagagcttccaagtcgctttttagts
tcccactcttaaatatgagcagacagccaaggatcaccagacatctgaggaaancctctaatatggcaga
caganaaataaaaacagagaaaaacawwntntatccatgaaacaagaayaggatgctataaaaaggaaca
ttcagagaacaaaaagaagctcttggaaattaaaaacgtgagagcagaaattaaaatttcaatagaaggg
ttggaagataaagttgaggaaatctcccagaaagtagaacaaacaaaggataaagatacggaaaatagga
gagaaaagaattaaaaaaattgaggatcagtccaggaggtccaacatccaactaatagaagttccagaaa
gagagaacagagaaaaagatggaagagaaattatcaaagaaataattcaagaaaatttcccagaactgaa
ggacatgaatttccagattgaaaggncccaccgagtgcttaccgcaaaaatgaaggaaaaaaatagaccc
acaccaaggcacatcattgtgaaatttcagaacactgaganaaaaggaaaatcccaaaagcttccagaga
gaaaaaaaggtcacatacaaaggatnagaatcagaatggcatyagacttctcaacagcaacactggaagc
tagaagacaatggagcaatgccttcaaaattctgagggaaaatgatttycaacctagaattctataccca
gccaaactatcaatcaagtgtgagggtagaataaagacattttcagacatgcaagatctcaaaaaattta
cctcccatgcaccctttctcaggaagctactggaggatgtgctccaccaaaacgagggagtaaaccaaga
aagaggaagacatgggatccaggaaacaggggatccaacacaggagagaggtaaagggaattcccaggat
gatggtgaagggaaattccaggatgacagctgtgcagcaggcctagagagcaaccagtccagattggagc
aggaagatggaaggctccaggaggaatgttctcaagaaaatagaanacaaatgaaactgatagattatct
gatgtgtttgaatatattgagaggntatnatttagwcatgtgaaagtttgggggagaattgaattagtga
taggtacanagaaaactaagcaaatgaaaaaaagcaagacaattattaactccagggaaaacaaaaagtt
gtacaagaaaggaaatgtaatcatagtacactacatggctcagctgtgaataacatatttacatagtcat
aataatgtaaacactraatactgatttaaccaaaattatgatataaactatattgggaggataagaaatg
gaaagggtgtgcgtatkgtgtangnggaatgaragaantaaatcctcatcttccatagtaggaagtcart
agataatgtctaaaactgaaaaatcaagaaatagcaatataagcatgttatttagaaatatggaggtaaa
tattccaaaagaatcagctaaaagagttgaaagtggttgcctctggggaaggagctgnaggtggtgaaga
gngnagggacggggaaytgctgttttttataagccttttagtactatttgaccttttaaactatatacat
rtattactttaatttaaaaaantaanttataaaaaagnaaataagta
>TIGGER5_A   transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttaytgaatactgtactgaaagtraraaacagtatggttgtatgggtacttgaagta
cggtttctactgaatgtgtatcgctttcgcaccatcgtaaagttgaaaaatcgtaagttggggaccatct
g
>TIGGER5_B   Non-autonomous DNA transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttactgaayayartacactgtagartayyggttgtttaccctcgtgatcgcgcggct
gactgggarctgcggytcactgycgctgcccagcatcgcgacagagtattgtaccgcatatcgcyagcct
gggaaaagatcagaaattcgaagtacggtttctactgaatgcgtatcgctttcgcaccatcgtaaagttg
aaaaatcgtaagttgggaaccatctg
>HERVK22I   sequence of internal part.
[encoded data, 6887 characters]
actcttcaatcaacaaaacctgatgcaaaaaacagaaaagggggaga
>L1M6_5   Subfamily of LINE1 repetitive element 5' end - a consensus.
gacatcagcaagatggcggaataggactttccagcgctcgtcctcacagaaacatcaatttgaacaacta
tccacgcacgaaaataccttcacaagagctaaggaaaccaggtgagagattacagyacctgggtgtagca
cagaaataagaaaagacgcattgaagagggtaggaaggacagttttacattacccgcgtcacccctcccc
caancccaggcagcacagcatggagagagataccctctgcttgggggaaggagagggaagtgagcacagg
actttgccttggaccccaaacactaggcccgccccagtaaaacccagtactaggcaggcccccatagccc
cagactccaggccagtacctacggactgagccgyaccagatcccacagcccaggctccaggcctgcctgg
tggactcagtctccaggcctgccccagcaccaggccaaccccagtgccccaggctccagaccggccccag
caccaggccagccccagtagccccaggctccaggctgsccccagcaccaggctggcccccatagccccag
gcttcaggcccaccccagcaccaggctggcccctrcagccctagtcatcaggccagcacctatagaccca
gcctccaggctggcccctgtagacacaggctccaggcctacccagcrccaggccagcccctgtagcccca
ggctccaggcccaccccaggytccagaccagcccagagccaggtyggcccacatagccccaggcttcagg
cctgccccagyaccaggtcagcacccctggcctcagaccttagccaggtaccaggctggcacctgtagac
acaggctccaggcctgcccagtaccaggccagtccctgtggccccaccctccagggcyagcccctgtggc
cccatgctccagcagacccagggttcaggcctgtcccagtagaccccagcactaggctagtccccataga
cccaggctccaggactgtccctgtgtacccaggtcccagggcagcccctatggccccaggacccaggcca
gccctcagagacctagcctctaggccagccctgcagacccagcctccaggctggcacccayagacccaag
ctccaggccatcccccaggttccaggccagcctcagtagctccaggcaccaggctagcacccacagaccc
aggctccagactagccccacgctaccccagcaccaggccagccccaggctccaggctggtccctgtggcc
caggctccagtggacccagggtccaggcctgctccagcagacccagggtccaggcccaccccagtagacc
ctggttccaggctagcccccatggactcaggctccaggaccacccctgcagacccaggctccaggccagc
cccyatggaccaggatccarggcccatytccccagttgcaggctccaggcctgccccagtgccaggccag
cccccatggactcaggctccaggcccatcccagtggacccaggctccaggcccatcccagyaccaggcca
gcccctgyagactcaggctcaaggcccaccccagcaccaggtcagcccctgtggacccaggcttcaggcc
agcccctatagacacaggctccaggccyaccctcatggacccaggctccaggcccayccccacagaccca
atcaacaggtccacccagtggatccaggctccaggcycaaccctgtggacccaggcaccaggcctgccac
ctgctgacccaggcaccaggccagcctgcctaaggactccagcagcaagcctgcctatagaccataccag
atggcctgcccagaatctctggatgactggtgaagggctttcccagacaaagccagtctgcaaagactgg
aataagtccctacttcttcaaatgtgcagacaccaatgcaaggcccaagaatcawgaacaatcagggaaa
catgacaccaccaaaggaacaaaataaatttccagtaactgaccctaaagaaatggagatctatgaactg
cctgacaaagaattcaaaataattgttttaaggaagctcagtgaactwcaagaaaacacagatagacaat
taaatgaaatcag
>ORSL   Origin of replication-like (ORS8) region (a consensus).
ycccatacygtttccrtcactrgtytgwgcaccctctgcarggmagacagcatgayttttyatctttgaa
tycyyaaaasttagctcactgtgtgctcaaacgtgtattgaatgacagttgctatatttgaggacbacat
agattttggggaagacggacaggcacactagcagaaccatacgaaggccaggatcagtcatgaccagggc
tgcattatgacttgtgggccctgagcacttttgcttttatgggccccttcctccataaaaatattaaaaa
ttatattttatgactgcattggtataaagatgagaatataatccaggctgaattaaaacattttcttaga
ctctaaaatttcatttttttctgattttaaaagaaattaaaacattttyatggggccctaaagtattgtg
ggccctaggcactgtgcctactgtgcctaatggataagtcnagcctgaccagggcactctggtgtgaggt
tgaagaaaggaaatttggaacaaagaagccaagtgctctggagaagcaggtgaaacttccactgccgaac
aaaatcagaatgggagcagccatggttaataaggttgtggaagtttagascttccagttcacttcmcctt

>L1MC5   3'-end of L1 repeat (subfamily L1MC5) - a consensus.
aaaaaaaaaayacatttctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatga
gtaccctyaggacccagattgtggtctctaaataccatttcccactaaaaggaaccagggctccttggag
aaatggctaattccaggtctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagata
gcaaggaagctataaaactactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgg
gacaatttgagcatcaataataactgcaatttaacacatcaaatatrtttaaatccatgagtttataata
aaaaaatctaattggtcacctttggagtgatgctagggaaccaactcattattttgaaaactggtaaata
aagggaaagaatcaagcatttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwga
tgagggaaatttctctttatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcac
cattttgcaacccctaatgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaac
tarasatytgcctcctgatggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatca
aacctgaatctgatcaagcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatg
ttaaatgacaccatrgggatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaac
ttttcttcaacaaataaattatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaa
agacatatcaaccaattacaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaa
atatatrtgtatacaattggaaatttgaacactgactagatatttgatgatattaaggaattattgttat
ttttaggtgtgataatggtattatagttattttataaaatagtccttatcttttagagatacatactgaa
atatttatagataaaatkatatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtg
gagctatagatgaaacaaaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagt
tcattatactattctctctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgt
tggacattaatttgttggcaa
>MLT1J   (MLT1j subfamily) - a consensus.
tgtggcagagactgctagttgtcccccaatatccattctccccttcttccttagtaatagaamccccaat
ttttagctgggcacatggccacccagaaataaagactacatttcccagcctcccttgcagctaggtgtgg
ccatgtgactttctaagttctggccaatgagatggtaagcagaagtgatgtgtgcaacttctaggaaatg
tccttaaagagaggggcaygcccttcttttccccttcctccttcctgctgcctggaatgtagatgtgatg
gctggagctctagcagccatcttggaccatgaggtgaaagccacatgctaaggatggcagagcagcaaga
tagaaggagcctgggtccctgagactatggagcagagctgccataccagccctggactgcctacctctag
acttctatatgagagagaaataaattctatcttgtttaagccactgttattttgggttttctgttacttg
cagctaaacctaatcctaacayacca
>HERVFH21   HERVFH21I endogenous retrorvirus flanked by LTR21s.
[encoded data, 6603 characters]
acctattaaaaggctggaa
>ZOMBI_C   transposon - a consensus.
caggtccacaatcccttatctacaattctaaaatccaaaaagctctgaaaactaaaagtttttttataat
ttgaaactcatttggcagcaaaacctgacctgaactgatatgaggctatttatagtctttatttatccca
cttagtgtgaatattcatatatttcactgcagaaatattaatgtgtttgattatagggtgctgccccaga
ccccactgggggtgttatataatatatagtatatgcactatattacctttctaaaatctaaaaaattctg
aattctgaaacacatctggccccaaggatttcagataagggattgtggacctg
>L1P2_5   5' part of L1 subfamily in primates - a consensus sequence.
ataaaaaaattaatgagaagaggattctgggaagatggcagagtaggaagcaccaggaatctgtctcccc
acctagacaacaattgcactggcagaatctgtctgatgtaactattttggaactctggagtctattgaag
gcttgcaacttccaggggaaggcttggatggtaaattgtggttaatttcggtcaatttcagctcttagca
cagtagcagctacccatcccccacccccagccccgtggcaggcagctgtgcacgtgttcctggagcagct
tgcacacagcttgcgggagccagggtgggcaaaaaggatcctgtcctccaaatatcggggatctgtgctc
tgatcgctgattgctgcttctgatcacagaggtgcagacaaagaggtggcggccattgttgtcgcacctc
ccyccattgttgcaagcccctccccctctggctgaagtgacttccaggggatttaaagggctagtaccct
ttctccgctttatttttcttttttccccttttgggagccagacattaaagactaggacattcaaaagcaa
ctgcatatacggggaaaattagaaagtcaccgtgcatgcccagggaaaggcacaggctcagaaaagacct
gagaagaccttaagtttacacctcaggctgatccttggcacagagacagcctacaacaataaaaacaaaa
caaaaaaataacaaaaacacagcaaaccctggggaagagggagaatctgatttccagagttaccacatta
ttagattcaaatgtccagttttcaacaacaacaacaaaaaatcacaaggcatacaaagaaacaggaaagt
atggcccattcaaaggaaaaaaaataaatcaacagaaactgtccctgaaaaagacctgatggcagatcta
ctagacaaagactttaaaacaactgtcttaaagatgctcaaagaactaaaggaaaacgtggagaaagtca
agaaaatgat
>MER97   Primate MER97 repetitive element - a consensus.
caggcagtcctcgctttgcacggttccgatatgcatgaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccacggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactacataaataacagatgcgcatcatgatcagtga
ccaatcacatcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattcgaatcaaacgtaaatggagttatagaagaaatagctgaccgtgggaatgttgacac
tgccgccatttgagagactctagatatgcagccagaggaacttagtgaaggcgaacttatcgacataaat
gaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaagtgacgccagcaaaaaacttcacat
taaaggaactcttggagatatttcacgacattgaaagcgcaaaggataaaatgttggaagctgatccaaa
cttagaaaggagtatgacaatttgccaaggcatagaaaagatgcttactccgtatcgtaagttatataaa
gaagaagaaggcaagcactgttcaaactactcttgataagttttttttggtttgttttgataagtttttt
tacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattatagtgtactaaataaatat
tagttttattatttttttcattccctatacatttataaccgacggtaagagagtttttaatgtttttgac
aaaaatttttaaaggtcacggaacaattataattttcccattgattattaagatcgctttgcatggtttc
agcttgcatggtcatttttacggtcccgtactaccgtgcaaagcgaggactgcctg
>RICKSHA   Primate RICKSHA repetitive element - a consensus.
gggtttggatcataatcccgaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatcctaaagtctaaatccctaaagtctaaaatccctaatgtctaaaatcccgaaaatcacaatca
cgaaagattaaaatctcaaatattgaaatcctgaaagccgaattctggggaagggattagtgcgttttcg
gttgtacgcaggatagttgcatcatgttagttgcatcatgttaggtggcagaactattaccttgttattg
tctttatttggaaattaagtatggtttaaggagacacgtatgggtgccaagttgacaaggagtggacttg
tggacttaattttaggtgtcaacttgactggattaaggaatacctagaaacctggtaaagcattattttg
ggtgtgtctgtgagggtgtttccagaggagattagtgtgtgagtctgagcggactaggcggggaagatct
gccctcaatgttggcgagcaccatccaatcggccgggggcccggagagaacaaatacagaaggcgaactg
gtctctctctgagagctgggacagatttttcttctgctgccttggacatcagaactctgggcttgctggc
tttggactccaggacttacaccagtcctnnnaaccgggtcctgaggctttcggacctcagactgagagtt
acaccattggcttccctggttctgaggcttttggacttggactgagccatactgccggcatcccagggtc
tccagcttgcagacggcctgtcgtgggacttctcagccaccataatcgcgttagccaattcttctaataa
attccctctcatrtatatatatatcatattggttctgtctctctggagaaccctgattaatacagatttg
gtattggggaagccgaatatcattccttcttactgtattccttacaacataatagaagagatctgtgaaa
ttgttccctcacaaaaaggctgtgataaaataagtggacgaggctactcaattgtgaaagataaaattta
aaagctaattattattggtgctgcaaaagcagaaaatcacttaattacaatggccgagcaataaccagct
tttaaatggacagcatatacttacaaaatttgtagaccacaaccactctgcaaatacacatgcagcaagt
gtcttgaagatggcaamartgaaaattcagtttaaaaatacawsaattscctgccaaattattcaatctg
tatgacttctacttctttacacaaaatttatgctatgtatttcatcttcgcatcatttccaatactggag
gtataaattgtgtagagacttttagagagttctaatttgttttatgcattttttgcaaatttgactccac
gaaagtgcattatcacaatgttgactttgtgtgtaagcattgtgcatgtatgtaaaaacgttgaaacttc
ctcaataaatgaagagatgtcctttttgtacatctgcatttgtgaaagataaaatttctcaagatcttgg
ctctttgggcgactgcatatgcggtggtgacccatcgcggtttttgatcgatctcgtcaaaagacttagg
ttgttcgtcacggtatttcagatgaccgcagttataaagctgggtgcacacaattaccaaccatagtgat
atgcgtttatacatttccctttttgacctatttctttatgaatacggttcgtctgctcataactgttata
cccgtgcgactgtcattagtatacctgagtgtttatgcttgcaaaaatatgtatgttattattgcctatt
ttattgtgtaaagtggcctatgaagtgttctgtcatgtttttatatgtttctcaaataaatcccctttta
aaaatgtaaataaattatcttttaaagaatttttaaattttttttcagaattatattttcgggattttga
tctttcgggatttcaacattcgggattatggcgtttgggattgtgtctttcgggattatgatccaaaccc

>HERVK3I   sequence of the internal part.
[encoded data, 7313 characters]
ctttcaattaattcataaacagaaagggggata
>MER102   Interspersed repeat MER102 - a consensus.
gggttgcaaactcaaatgcctacaggggccaggcaggtaacataaatgagtgaagtgggccaggtgggga
ctgtggcaaactggagagcacatgccctgtctaaagggggcagcagctgctactcagctccagccaattg
ttgccatgtgggaatgtaggcccagtgttgccagatcttctgatttttcaagagaagccagaaatctaga
tttttatgtgaaatctcctgatttttaaatgttggcaactaatttaaaatttttawaaaacactgtgtag
gccaaacaaaacatatctgtgggccagatttagcccatrggctgccagtttg
>MLT2E   Interspersed repeat MLT2E - a consensus.
tgctggattgttctgttgtcaacttngttaagctnggaactatgtttcccagaatccccttccctgtatg
gttctgggttagagttggccaaagatgaaattgtggaagatttggaaggcagaagtgaagcagcagccat
tacactctgaaggtcatcattggttasaggcagtgagagatggccagatgcagaggtgcccaggaggttc
cagcttgtcctcactctcccctgctcyatatccagctcttcttcctgaccactggccctgctgaccaaca
gcarccccaggcccaccaccagatgcttggctgcaaactcacagaggtagtngccacacagagncaacaa
ctttccatagagttctccaccagctccccttcatggtcncacttyagcggctggatatgcttagcttcaa
atttccccacaagctccagnctcattcaactncgccagagctggttagtgaccctttttctgatccttca
actcccccctccagaccttcacttccccagctcctcccacaattgtataaggtctaattcctataataaa
tcccttattccatanatactacatagtggctctgcttccctgactganacctgactaataca
>MER103   Primate MER103 repetitive element - a consensus.
agttccatggtcaaataagtttgggaaatgctgggttaaacaaagttaaacaggtttctttactgcagga
cttctcagagcctttaatatgctaatgtgcattgtgaatctccaagaggggaaatatagtatgcagtrtt
tcccaaatttatttgaccatggaact
>MER104   Non-autonomous DNA transposon - a consensus.
taccatatttcattgaatctaagatgccatcaattgtaagatgcaccattattttatgtaccactaagaa
agaaaaaaatgctgccaattaaactataacatgccattaattgtaagatgcatcccaatttcagagatgt
taaaatgtgaaaaaatgtgcatcttagaatcgatgaaatatggta
>LTR54   Long terminal repeat - a consensus. 
tgttaaataaaatttataggaggccattgttttggactaagctcctgcactaggccccaacagaacagac
caaaccaaaatggagtcactcatgctaaagttccatgtcaccaagctgaaactaagttgtttatctgacc
ttccaagaaatcaggagagagagagagataacagccaaatccccaaacaggccagttttagccagcatga
taaggaagtcccctctgctttaacctttaacctaatgttaagcaatcagttacttntctattgttctgtn
tccctgtnttaaccttacaaggaaagtaactttgaaatgaccaatctgctttttgttctctgtttctgct
ttcttcagcccttttctgtctataaagccaacctcctctgctcagctcatyggaacactcattctatttt
atagaatgaggtrttgcccaattctagaatcacaaataaaagccaattgagatctttaaactaaatttgt
tgtaattttgtcttttgaca
>MER44B   Nonautonomous DNA transposon.
cagtagtccctccttatccatgggggatatgttccaagacccccagtggatgcctgaaactrtggatagt
acygaacyctatatatactatgttttttccyatacatacttatgataaagtttaatttataaattaggca
cagtaagagattaacaatantaactaataataaaatagaacaattataacaatatactgtaataaaagtt
atgtgaatgtggtctctctctcaaaatatcttattgtactgtactcacccttnttcttcttgtgatgatg
tgagatgataaaatgcctatgtgatgagatgaagtgaggtgaatgatgtaggcattgtgatgtagcgtta
ggctactattgaccttctgatgtctgatgatatgtcagaaggaggatcatctgcttcaggtgatcctgga
tcattgagccatgacaatgtcgatggttggatgtcaggagcagacaatgtcgatgactaatgggtggrta
gcatatacagcntggatacgctggacaaagggatgattcacgtcccaggtrggatggagcaggacagtgt
gagatttcasccatcatgctactcagaacaatacacaatttaaaacttatgaattgtttatttctggaat
tttccatttaatattttcagaccacagttgacyatgggtaactgaaaccacagaaagtnaaaccayrgat
aagggagaactactgtaca
>HERVL68   Primate HERVL68 repetitive element - a consensus.
gcactrtntgggannnttnntggaanggaagaagagggaagatggatgacaaaattatgcctgggtvgct
atggagttattcatggtatraaayagcagctragctgctgtctgttatgagaggtaaaagttacctgtgr
aatttgaaaatgatagatccaatcacagagagttggcnysctggatcccytggctgcttttggccwtkct
ggctaaagtnaggaaraarcacancycarrtgatgtctttggtttttgttctytcctccarktgggagga
gaaagggcccaaacattccnaaangtgagcttnntwtgsaswaaagwyawwaacaktwnnttgnagttnt
cttctccaggtggnaggngnaangrtcngaaaantnctnnaggcnngnwttgagtgrrccaaraatgtta
aaagtttgcattgctctctcctccaagtggaagraaaaargttaaatcagttcccagggctggagyaang
ctttagataaaccagaggaggagaaaaagtaaaaaaaaagcccnccaaacaagwaaaccactctagccnt
ttctacagcttagctgctgcyacagcaactcaacnccctcctttcmctacaaccttcanctccagcanct
gtaatgttaaccytgtaaadtgctnaatttactgctaggggtttgantaaacatghaatgagtaaaaaga
aggaaatnattatwgaatsrctttgtattttgtggctattgcatctggatgtatgataaaaattratgta
aaatgttatatgcttgtaatttcataaatgctagaggaatcatcctaatmgggaaagctgcaaagaaaaa
aaagttagtggnawcacaactcccttgctttytgctgcyggtgggtggattggaatttaaactctttgag
tattggaaasagaacaagtctccataactgatgatttttgcctattggarcctctgnaaaaagggagaca
acatnaaaagagaggcaatctccagatggagatacacttttggagttttaaaaanyagtttttagtttgc
taatgwgctcttgytgaaatgagatgtctgacccttagaggctgatgattttcagcctgatgtgcatgat
ttttgagggggtcaatttggactctaaractgacaagataaaaaggmctyttagaaaagccttgcttgtc
acttggacttggaatacagctgtctggntcttcagtntctcagctttgctgctgctgaagaaaagccact
ggcttttttggaatcctgaattcacagatcctaattgcctgtacctgactctaagctgaaacctcatact
gtctgctgtgrgctgtttcagcctcgngntgagctgtgctgaactgaaatnngntgaaatggctcgactc
aatgaacagaactcagactctgggactgttgcagatttaggaccaccctctgtggggccataaactatga
aaacatcacggatgctggctggactgtctgggtcacatacagatgcccacaggaaagggcttgttctctg
atgggaccatctaaaattgagctgctgattggctctatatttctgatacagagactaattgcattcttaa
cttgtgatttctgtcgaaagctgcaagttgggggagggcacattacaagaagtgtgacccctccacccac
tcctgacagattggacttgaccccctctcggggatgtctcactgctattgacttgttgtgttcggctttc
tggattagttgcagtttgcaacaatggactgacagcctgagtctacttccctcacctttctcctggtaca
cacatcttagtgagacagtttgattattaaatgcagctgtccccagaaagggattgatcttttttttcct
aggctgctcaccggataaatgatcaggacgaaaagggtgggaaggttatgtaaactcattttgaaaaatt
ttgaaaattcagaattcatcctgaccaatttctgaacatgatgtgtctttccggttaagttgtataaaaa
tgtttttctataaaaatgtttttgtccctcttgcatacaacccttccagacaaaaggtctgggtgagagt
aagagatgattggagaaatatgaagttaagattgtaagttatgaatattgctgaatgggacacactgatt
ttgtaacaacggagaaaaaagaaaaacctatggaggcacggggtgtgagagagggcattaatgatctttg
tttttcagaactgctcctggaagctttcccctcttcctgaagaaaaattccccatgctgcctttccaagc
tgctgcgagcgctttgaattcaaactgactgctgagcctaagatcacacctgacagcgctgactatgaga
cagcagggggtggccccagctcctgcactttccacgaagaacacctccagatgtcatccacacacatgag
acggatgaactggtgtcatggacaagcaaaactgtttggaactgactgcctttaggcagtccctctgaaa
ccaaggactaaactgaattaattggactagactctttgggagtagtccccgtggtaagaggccacactgg
ggaccctgttaacctgtactgcctgactaatgtatgtcctgcttggggtaccctaacaattgtaaactct
ttgtttccaggggtaccacgtgtgccctctgggattgtacttttatgtgtaccctgactatcatgacact
gcctcagccctggaaggctttcaggtcagcttcaacttactggccagagttgtgctgtgcctgaattgat
gcctcaggccaraaaaaaaaaggttaatacagaaacttaaggaggaagccacctggctttctaagataga
cctttatggttaatgggatttgttttaactggctaaattcaggacccctaaagggcataaactgagatca
atactgcaggttggtctcaccctgctgcgtggggtcctactgataataattttgctgtaaagatgccttg
gccaagggggtggactgtgcagaagag
>MLT2F   Long terminal repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttggctaggctggaactacatttcccagaattcccttccctgtat
rkttccaggttagggtgggccacaagagacattctgtgtgagatttggaaggcggaagtgaagcagcagc
cattttgttttctgtgctcggagaggtcagagtcagcaggcgctgttgcagctcacacacgttgtcgctk
atctgctggctcacctcgttggcgtggggcagcagccgggcccgcagctgctccascttcccctggatcc
tccttcagcttctccgactcctgggccaggtgtgtgtktagctccgtgacgaagggcgccagcttctcct
gcaggacacccacatcatcgaggtcggaggcagtgagagactgacatgggttccagtttgtcctcgtggg
ttccagctcatgcttgtgggttccagcttgtccttgctctcccccactttatatccatcttcccttcctg
actgcctgccctgtggacttcaagctccagcatcagacgcaragacaacagccttacagagactgcttaa
ccagctcccacaattgcgtaaggtcaaatccctataataaatctcttattatatatatctcctagtggtt
ctgcttctctgattgaaccctgactgataca
>HERV18   Endogenous retrovirus HERV18, internal part - a consensus.
[encoded data, 6603 characters]
grtg
>HERVK11I   It is flanked by MER11 LTRs.
[encoded data, 6461 characters]
agaacgaacaagccttcatcgccatggcacatttatataaaaagaaagggagaga
>HERVK9I   HERVK-related endogenous retrovirus.  It is flanked by MER9 LTRs.
[encoded data, 6032 characters]
>HSRIRT   Partial internal sequence of endogenous retrovirus HSRIRT.
tttctggtggcccatatggggattggagataacagatttactgtctcctttgcccatgggactagggccc
tggggctgtggaagacctggcatccaaggcatgccatgggggagtttcacccggacggagactggctctc
cccgcatcctgcccagcagtgcaactgaacctgagatggggctgcaggatgacaccagcacttcaggaac
cgcgttgcaggtgtcacaccttggattcaccatagctggctgaaactagcagcagcagtgactcccgact
atgaccagtggattaaccaacaagaccctgattgccccacccgaatagacctacggcgaatcccaaccac
cagtaagaaggacaactgccctgctctgaccacactggaggctggtcagtctacacatggctgaagcttg
aagatcttgcaagctcttgctcttagtcacatctggaagctgactagtctacacacagccgaagctaaga
ggaccactctagataagtaaatgtagataaaatttataagcctagttataattgttctgttgttacatta
ttactgcaaatgctgcaaatgtccatgcccagaggaaggtttgccattcctgtgtgtagtgtaagcatgt
ttctattacatacactaatgttgttaccatttctgcctatactagaaggggagaaatctctagaaggatg
cccacactgtgtacatactacctgggtaaggaataccatagttaaaactctactgtaccatacctacagt
acaggaaccaagttaggaacctgcacatacaaccagaccacctattcggtctgtgacccaggaaataatc
agctatatgtatgttatgaccctaagctcttaccctatgaattctggtttgaaatacatattaaatcaga
gggagaaaaagaaggagagttatagctcgaacaaaagaagcccctccctcctgtaaagggcctatttcct
tgtactttgatgcctgctatgctgcatatgttcacaatcctaaaaaaaaaccagaagccagtctgcaatg
gtgtaacacaagagaggcttagcaggagcagccctaagcatctgtacaaagaaccacaaatcggatgccc
agactgtaacattcagtggtccacactaacacaactccaatatttatattcaggaaggagtgctctgcta
agtagtatgttaaccaaaccaaactgtaagacaagaacatgcaatcctttacattttactatcttaaagc
cagagatacctttctggtctacaggacagacagcactataacgacttgatagactaggagcaggccttgg
agttccactactaattgtcaaaaagactaaaaggactcaaatgcatccaaccccgcaattctgggtccat
aatcattctataagcatttggataagccagtgcctgagcttcccccaccaaccaaaaacttatttgctca
actagctgaaaacatagctggcagcttaggaatttcctcatgctatgtacgtggaggaactaatatgggg
aaccagtggccatgggaggcaaaggaattaatgccacaagataacttcacttcgcttaaccctgccagtg
aaccaacagcctcagccagtgtttggttgttaaaaacctccataattggaaagtaccgtatcgccgttgg
gaaaggctttcacagaggcagtaggagaaataacctgcctaggcaacagtattatgatgagactaaaaac
aaaactctatggagaagcacccagaattactcctacttaccagatccaaatcctttatctccattctcta
ccctaagccacacttggcatcaactagaggttccaaatgcttcgaaagcaccctctggcctatattggat
ctgtggagcatgggcatattggcaactgccagctaaatggacaggagcatgtgtgtagtaacaatcaagc
cattcttctttctaattcctctaaagcaaggggaactcttatggtatccagttgatgatgaaaataaaag
aagaactagaagagcataatcacaaaaatagacacaaatgtcaaaaaggatgtggacataggagactgga
aagataatgaatggcctcctgaaagaataattaaatattattggccagctacctgggtgcaagatgggtc
atggggttaccacaccccaatctatatgctcaactgcatcataaggttgcaggcagtctttgaaattata
accaatgaaacatcaagggcactagatttattggcaatacaagcaacacaaatgagaaatgctatatatt
gaaatagattggcattagattatcacttagcctctgaaggaagagtatgtggaaaatttaatttaaccaa
ctgttgcctagaaattgctaataatggccgggttgtcatggaaatcagagctagaatgcacaagttggcc
catgttccaattcagacttggtcctaatggtccctggattctttgtttggaggatggttctcaacctttg
gaggattcaaaaccctcactggtgggtttttgtttattcttggcatctgcctcatcctcccttacctttt
acccctgtttattaggaggattcagtcaactatagaggcagtaataactcaacacactaccgcacagttg
atggcattaaccaaatatcagccactgccagtagaagaagctcagctctgtgaagaggtggcaaatagtg
gtgctttctattaacacctttgttataaaaagcagcaaagggggaaa
>HERVK3I   sequence of the internal part.
[encoded data, 7313 characters]
ctttcaattaattcataaacagaaagggggata
>LTR63   Putative LTR from human endogenous retrovirus - a consensus.
tgttagagtaggcagatagccagacatgagcaggagnggaagcccctgrgaaaaggaaggtctggaaaat
ctcacacccsagagaccacccaaaanatacataytagatatgagcagagangaggggaaatacctatgca
gaaaaaaatgccccttaagatgcccagtaatcattcactctgcagttaaactgtcagaatgttgctagct
acatgctgataagggaagagggcaaaggagaaattcctaagagataygcaggtgcagtaagtacagattt
gaccactatacaaccttcctggggtggcagtaatgagcaatgcmgccattaggtagrattcatatccaac
accgggtccgtgcatgcgcatcaaccaacagtaagggaggvtcccacaagcctgggtaggaactaggtgg
ggaaargcagggacttaaggcagaagcaggaaaactagasaaagaaaaaggtggagacttaagacagagg
tgggaacttcaaraaaaatcygacatcataaaaaccccgtgcagactctcagggctgctgctggctcact
ctctttcagcagcccrctctgcctca
>MER109   Interspersed repeat - a consensus.
aaagactagatntttcanatyagaacttaannttgtccactatatacacagcantgttaaataaaatngc
acacacataacaatggttanaatctgaaatatcttctaaatatgaacattttggcctagaacctttcttt
tctcacttccttctctctgccttcaantcagtggacaagtatangcatgtgtaatgctctagagatggtt
taacaaatttatatccaaaagtcatttccagaagacaanccttnctatraantttaacaaaaagtktaca
aaaggtgctaattctactangtnctttgtcatacactggcagcctctttaacatctagagactagatgtt
gcaaaattaggactcatttgtccattatatacacnatatacaaagcaaaacaaaatgcacaanacataca
gaacaagagttcctgaaaatgtgcaattatnaacacactggcacadaaccnttcgcacttccttctctcc
canctcctctaaaccactgaataagcacagacantaatatacngctcaaagagatggtttaacaattcca
ttyccmaaagacagtntttcctrtgaattttanntaaaagtnacttaaagngtgttattttactacctct
acatttaacatacattangcacttcnraacatctagaaagactagatrtttcaaanaagnacttaatttg
tccactatatgtacagtagcattgaataaattgcacacatataacaatggttataatttgaaagtgtctt
ctaaatatgamcattctggcctaaaacccttcccatctccatcaacycagtggacaataatgctcaagtt
ttcagaagacantctttnctatganttttaangcaaaatgtacaaaattattagtttactaactctactt
ttgtcatacactggcaacctctttaacatctagaaagactagatgttgtaaaattaggacttgtttgtcc
tttatatacactatatacacagataagtaaaataaaatgcacagacataagagacaatggttaatcttgc
ctcactgtaaacacantgntggcataganctctttgcacttccttctcctgcctcctcccctgaaccagt
gcacaaacacaatgtgtaytactcaagaggtggtttggccattcccccaaagacaacatttcatatgaat
tttaacaaaaagatatttacaaaatgtattattttactacntctactttnaacatatatcaggcacttca
gaacatctagaaagactagatatttcaaaaaaatacttagcattgtcaacgatatatacagtagtgagga
ataaaatgcacacaaaacaatggttataatatgaaaatgtcttctaartatgaccagtctggnaaagaac
cttcttctcttcattctcacgccttctgctccatgkcctctaacccactgaatgaacgtggtsgtgtntg
ttgctcctggtgtcacttctagagctcgtctaacaatttcgtttcnaaaagtcatttccagaagacattt
rttttctankattttttaaaanaaaaaagggcatttacaagacgtgnnattttctaact
>MER62   Repetitive sequence MER62, 5' end of L1.
caaagaaatgtatktwtgcaggagggcttcaagatggctgactagaggcatctgatacttacctcctcca
caaagaagaaccaaaatagyaagtagataatcacactttgaatagatcatctaagagagaacactggaat
tcaacagagaagtgacaggaaacacctaaagcaaggaagragaaggaagtgaggcagcctgattggctgg
gagcctggagaggctcccyaatgcagggaaagggtaagtgagagacccccagtggtccacattcccacca
tagactcttacaatcctagccatgagagagcccctcaaccctcatgggccctgagactaacatagagctg
cctggagantgtgtgatggcattgctccagagagngagctcacactgggtcccacamacccccaagtcct
aagcagctgcagcatggtaccattttgagagcctagcccccaccagactgcatcctgccctgggrccaaa
aatcttccctatctccacattcctggagccccagtgatatnccccacccatggctgcagctgctggggca
raggcaggaaccactggcagcaabcccwcccctgcccagcagaggggtggccayacaatttcatayacac
caaggacaaattcccctgmctgcaaatgctaccactgngagctgctgtggagctgagryanaagcaatgc
acmcgctacccaggcrcctgcctatggctgctnccacagaaagcaaccccaccctccccagcagcagggc
cacagtgcagccactgctgccctccacctgagcattccaccaggggcctggggatcaccctgcccctcga
ctactacagccagtacctgcatacaccactrggaggcctgaggacaggtctgcccagcccagctctgcca
natcccccagtacccaagcacctatctaggggcctggggattgcccaacccaatctaccaccrktggcat
ctgagcactcctcctggggtctgaggatnggcctactcaacctgctactaccaccacagctggcacccac
ccacatgtaccacctgcaggcctggggactggccyrcccagcctgtngcanccactgccaacacmaacat
ggantgcttggnacccagagggttgtcccacccyactactgccatcrcycataccatgcncgctgcccag
gggctaagaacctntctacccacctrgcccacctctgctattyctggcacccaagcaagccacctggagg
cccaagaatcagcctgcctggaccyactaacaycagtgccaatatacrccrctctgggacccaaggacag
gcacactcagccwacyawtgccaccactggkgcctgaagactggcccacytggcatcccagtccccagca
aaaywtcaccacagcttccactaacaaccrcaccctaagccactaaggaaatcacagacaccaytgatrc
tgtttacarctaaagaaatcatatggagactacactacttcaygcacmcaga
>L1MCC_5   Primate L1MCC_5 LINE1 repetitive element - a consensus.
gggggaagaacagaagcaaaagccttctscycnygngraagggcagrraacwntntyaggyncaggatnn
tgcantgatacaaancagaggtcwgctactactgggagaggnacaggtcccatcccaaccacagatacaa
ggagagtttgactgccatggagagaggggcaggaacactgagaaagccccactcctgaggcccaggcgca
cagggcctgcctaagactgaggctggaccaggacaacagagaacatccctnctcccaccacaagcctaac
aagcaccaagtaacamagcaacagcagtctaccactgggggagggnnannannatggagagagactccct
ctgtggcacaggtatgcagggactactgaaagctgagggtggagcaggaacactgagaaaaaccctctag
caaaccagcccccacactaagcacaaggtaacagcagcccaccactagaggaatttgaagcctgtggtgc
actgarggtaaccatagcaacaacaaaacccaaacccagctcaactcctgactagattgactcaaccccc
acactaaaagcctagcagaagaaaaggcatgcccatttccaggcataaatactatttacctcagtctcta
ctgttcttctacacataatgtctrgcattcaataaaaaattacaagacananaaaaaaagnaaaaaaaaa
caacccattgtcaagagacaaagcaatcaacagaaccagactcagatatgacacagatgttggaattatc
agacaaagaatttaaaataactatgattaatatgttaaaggatctaatggaaaaanggtagacaacatgc
aagaacagatgggtaatttcagcagagagatggaaactat
>LOOPER   Molecular fossils of autonomous DNA transposon - a consensus sequence.
ccttyagaayaycatcaggtcttgnannnnnttttatttttgagtttttahttgtaactatttdtaagga
tattttatgncntttattctttcaaagaacwrargaaanatgnctgaataaanctcantnnagctngtan
ttaannatagnntgaganatcttnatgancctattttttccattttgctatttnatcttnctaggnatta
tttyatcattactantcaattntttctaactgtgctnwtataaaaagactaaaataataagaaaatggaa
gaatgatnaaacctcctgggatgaaataaataaatcatcactatgacatcatccttcagttttcttactg
tgttgcccaaagtattgcatatctttcaagaagggtataaaagaagtctggagacaccatctttgwagtc
tttttttagctttcattgaacacagttgagaattcagaatttttcattttctacccataatggcaaagag
aaaaaaattgacagaggaaacaattattagatgaatcagaagatgaatgcaaagagamagatagcagcac
tctagactctaatgatgatggtgaaattgatcatataagtgaaatctcagactatgagtcttcagatgat
gatatcctagatraattttctcaaactcaagaatcgacgagtgaacaatatatttctaaggacaaaaagg
aaatatggtattctcatccagttagtcattcaacaggaaggacttcatcacgcaatattttgcgacaaga
acctggaccatcccattttgctaaaaggacatgtgacagtattctttcatcttttatgatgtttgtgcac
caaatttactacagtttgtaagtggacaaatgctaaaggcaggtcaaaaggtaactggaaggaaatagat
gaagagaaraaaaaawtcattgaattgatcattctaattggtgtttataaatctaaaaatgaaaatgttt
tgcagttatggagcaaagaagatgrctctcttcaacaaaattatgagccctcaaaattttcaaaagtatt
acgttttgacaatgtaaatatggaagaaaagacaagaaataataataagctagaacctattagagatgta
tttgaaatctggaatcaatatttacaaaatagatatgttccaggctcatccatgacagttgatgagcagt
tagttgcattcaaaggacgttgcccatttcggatatatataccttcaaaaccaggaaaatacggaataaa
gaatggaattacaattttgggttataattcaaattaaaatttttaatgaagtttttttacaattccttaa
ttcttcttctgtaaattattcgtaaaatgacttaaatataaaaaaataaaaagagttcattggacccaga
tggtaaatgatgatgactgtttttccttggtgtascgaggg
>LTR6   LTR from  human SSAV-related endogenous retroviral LTR-like element.
tggccagattcctgcttagattcatcactcacatcaaaaaggccaacagagcccaacaagaaacataggt
ccccaagcataggccaggccccttaaaactgtgcctaagtcgagtgaagcctttagattaattcttttta
tttatctctcttgtttatttccacctgttatgccctccgtgccttcctattcttctcacttctttcacga
caggacgtgtatttgcaaacactacttggaaggcaagaacctccaagaaagtctcttttgcagtcgattt
atgtgctttgttcccagagcctgcccataaccttgaagaacaatgcaacctgccggtcatagaagcgggg
aacatcaaccttgctacagggttcggacacacaggaagccggactggatgtaaaaactctaaaagtgaaa
aaaaaaggactccagagcattgacttttacctctgtcctaaaaatcaccctgactctagttgtcacgatt
cttaccaatttttctgccctcactggttttgtgtgaccctagcca
>HERVS71   Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 5538 characters]
gtcatcctcaccacgccgatggctctgaaag
>PRIMA41   a consensus.
[encoded data, 7810 characters]
cgtccctctgcaacccttaggattaagggtcttcttgtaaagggaggggggagata
>MARNA   Human non-autonomous mariner-like element.
ttatacatccaaatgaatgttntcnttcaaagtagtcaccttgggaaagctatacatttatttttaaccn
awcacaattctgccattgatcaaaacatttttggaacttctcttttggaattgccttcagaaccagttta
tgagccacataagaaaatcagtctcattactttatagtcacacctcatttttgaccaaaaatagtattac
ccagtttgatcacccaccttattcaccagacttggctctgaatgacttttggctgtttccaaaaatcaaa
tccaccctcaaaggataaaganaagatttgccaccattgaggatattcaaaagaatatgctgcaggctct
gaaggcaattccaaaaagaatgttccaaaaatgttttgagcaatggcagcatcattggaataagtgcata
gcttcccaaggtaattattttgaaggggacaactctcatttggatgtataa
>MER119   Medium reiteration frequency repetitive element - a consensus. 
tagagcagaggttcccaaactttctcagttcatagtgcccttagtgtctcagtaattttttcatagtgcc
cttaggcagtgtctcagtaattttttcatggcacccctaggccaaaagaaatacctaacagttcyattta
ttaagtagttaggtccaaacaacttaataagtatttatgtcctaacaacttagtagccatttgaaaaaat
aatacacataaattgaaagaaaaaaaaaaaatatttttatttcattcttaaataaccacaattacttact
aatgggatgtgtgtgcctgttgggcactgcacaacttctcaaaccttggaatcagattggacactgccac
cctcatttcctgttccacattgattgnttttcacatagtacttgctttttatcacagcaaccactgaaaa
cccagcttcacaaagatatgatatcatcaaaaggaatgtagcacacatgatctaatgttgaaactgtgaa
ctacctcaagctagtagt
>HAL1   HAL1 repetitive element - a consensus sequence.
ccctatagtgaagcccacmacctggcaagccccacccacgcactcagagcttccaagtcgctttttagts
tcccactcttaaatatgagcagacagccaaggatcaccagacatctgaggaaancctctaatatggcaga
caganaaataaaaacagagaaaaacawwntntatccatgaaacaagaayaggatgctataaaaaggaaca
ttcagagaacaaaaagaagctcttggaaattaaaaacgtgagagcagaaattaaaatttcaatagaaggg
ttggaagataaagttgaggaaatctcccagaaagtagaacaaacaaaggataaagatacggaaaatagga
gagaaaagaattaaaaaaattgaggatcagtccaggaggtccaacatccaactaatagaagttccagaaa
gagagaacagagaaaaagatggaagagaaattatcaaagaaataattcaagaaaatttcccagaactgaa
ggacatgaatttccagattgaaaggncccaccgagtgcttaccgcaaaaatgaaggaaaaaaatagaccc
acaccaaggcacatcattgtgaaatttcagaacactgaganaaaaggaaaatcccaaaagcttccagaga
gaaaaaaaggtcacatacaaaggatnagaatcagaatggcatyagacttctcaacagcaacactggaagc
tagaagacaatggagcaatgccttcaaaattctgagggaaaatgatttycaacctagaattctataccca
gccaaactatcaatcaagtgtgagggtagaataaagacattttcagacatgcaagatctcaaaaaattta
cctcccatgcaccctttctcaggaagctactggaggatgtgctccaccaaaacgagggagtaaaccaaga
aagaggaagacatgggatccaggaaacaggggatccaacacaggagagaggtaaagggaattcccaggat
gatggtgaagggaaattccaggatgacagctgtgcagcaggcctagagagcaaccagtccagattggagc
aggaagatggaaggctccaggaggaatgttctcaagaaaatagaanacaaatgaaactgatagattatct
gatgtgtttgaatatattgagaggntatnatttagwcatgtgaaagtttgggggagaattgaattagtga
taggtacanagaaaactaagcaaatgaaaaaaagcaagacaattattaactccagggaaaacaaaaagtt
gtacaagaaaggaaatgtaatcatagtacactacatggctcagctgtgaataacatatttacatagtcat
aataatgtaaacactraatactgatttaaccaaaattatgatataaactatattgggaggataagaaatg
gaaagggtgtgcgtatkgtgtangnggaatgaragaantaaatcctcatcttccatagtaggaagtcart
agataatgtctaaaactgaaaaatcaagaaatagcaatataagcatgttatttagaaatatggaggtaaa
tattccaaaagaatcagctaaaagagttgaaagtggttgcctctggggaaggagctgnaggtggtgaaga
gngnagggacggggaaytgctgttttttataagccttttagtactatttgaccttttaaactatatacat
rtattactttaatttaaaaaantaanttataaaaaagnaaataagta
>MLT1G2   MLT1G2 subfamily - a consensus.
tggtgatttttanaamanngctcaaattccttgacactcctntcatcaagaggtggagtctatgtctcct
gnctccttttgaatctgggtgggcttgngattgcttyaaccagtagaatgcagcagaagtgatactntgt
gacttctragrctaggtcataaaaggcaatgcagcttctgacttgtttcttggaacncttgctcttggar
accctaagccaccgtgtaagaagtctgactvcnctgaggctgccatgctgtgaggaagcccaagccacat
ggagaggccatgtgtaggtgttttaggctgacagtcccagctgagcccagccatccaagcaccagacatg
taagtgaagaagcctncagatgattccagcccccagccattgagtcacccccaggcctttgagtcttccc
agctgaggccccagacattgtggagcagagacaagtcatccctnctgtgngccctgtccaaattcctgac
ccacagaatctgtgagcataataaaatggttgttttaagccactaagttttggggtngtttgttatgcag
caatagataactaaaaca
>L1ME_ORF2   Primate L1ME LINE1 repetitive element - a consensus.
atggcagacntaaancctaacatatcaatrmttacattaaatgtaaatggattaaacactccaatcaaaa
gatacagattgtcagagtggataaaaaaacaacacccaacaatatacwgcctatmagagacacaccttaa
atataaagacacasataggttgaaartaaaagaatggaaaaagatataccatgcaaatwgtaaccaagag
aaagccggagtggctatattaatatcagacaaagtagactttaaaccaagaaatattactagagataaag
agggacatttcataatgataaaagggtcaatctatcagaaagacataataattataaatgtatatgcacc
taataacagagcctcaaaatacatgaagcaaaaactgacagaactgaagggggaaatagacaaatccaca
attatagttggagacttcaacatccctctctcagtaattgayagaacaactagacagaatatcagtaaag
aagtagaggatttraacaacactataaamcaantagacctaaytgacatttatagaacactntacccaac
aacagcagaatacacattcttttcaagtgcacatggaatattcaccaagatagaccatatgctgggccat
aaaacaagyctcaawaaatttcaaaagactgaaattwtannaagtatgttttctgaccacartggaatta
aattagaaatcaataacaraaggacatttagaaaatcyccaaatatttggaaattaaacaatacacttct
aaataaccmataggtcaaagaagaaatcacaakggaaattaraaaatattttgaaatgaatgayaatgaa
aatacaacatatcaaaacttgtgggatgcagctaaagcagtacttagagggaaatttatagcattaaatg
cctacattaaraaataggaaagatckaaaattaatgatntaactttgtacctcaagaaactagaaaaaga
agagcaaantaaacccaaagtaaawanaagaaaggaaataataaagataaaagcagaaatnaataarata
gaaatargaaaataanannngaaaatcaacgaaaccaaaagttgkttctttgaaaagattrataaaattg
ataaacctctagcaagactgacaaagaagaaaatagacaagatacaaataaacgcaatcaggaatgaaag
aggagacatcactacagatcccatggaaattaaaagaataataagagantantatgaacaattatatgcc
aacaaatttgataacttagangaaatagataaattcctngaaacatacaaactaccaaaactgactcaaa
aagaaatagaaaatctgaacagccctataatnattaaggaaattaaatcagtaataaaaaanctcccnac
aaagaaaantccaggaccagatggcttcactgctgaattctaccaaacatttaaagaagaattaacacca
attcttcacaatttcttccaaaaaatagaagargagggaacacttcccaactcattttatgaggccagca
ttaccctgataccaaaaccagataaagacattacaanaaaagaaaactacagaccaatatttctcatgna
catagatgcaaaaatcctcaacaaaatactagcaaaccaaatccaacagcacatgaaaaggattatacac
catgaccaagtgggatttatcccagggatgcaaggctggtttaacatayaaaaatcaaycaatgtgatwc
actacatyaacagrntaaaggagaaaaatcatatgatcatctcaatagatgcagaaaaagcatttgacaa
aattcaacatccattcatgataaaaactctcaataaactaggaatagaaaggaacttcctcaanataata
aaggnmatatatgacaaacctacagctaacatcatacttaatggtgaaaaactgaaagcwtttcccctaa
gatcaggaanaagacaaggatgtctactctcaccatttctattcaacattgtactggaagtcctagccag
tgcaataaggcaagagaaagaaataaaaggcatacagattggaaaggaagaagtaaaactgtctttattk
gcagatgacatgattttntatatagaaaatyctaaagaatccacaaaaaaacwactagaactaataaata
aatttagcaagntcncaggatacaaggtcaatatacaaaaatcaattgtatttctatatactagcaacga
acaatntgaaaatgaaattaagaaaacaatwccatttacaatagcatcaaaaaaataaaatacttaggaa
taaatttaacaaaatayatrcaagacttgtacgctgaaaactacaaaacattgatgaaagaaattwaaga
agacctaaataaatggagagatataccatgttcatggattggaagactcaatattgttaagatgkcaata
ctccccaaattgatctatagattcaatacaatcccaatcaaaatcccaatggttttttttgtagaaattg
acaarctgattctaaaatttatatggaaatgcaaaggatccagaatagccaaaacaattttgagaaagaa
gaacaaagttggaggactcacattacctgatttcaaaacttactayaaagctacagtaatcaagacagtg
tggtattggtataaggatagacatatagatcaatggaacagaatagagaacccagaaatagacccacaca
tatatggtcaaytaatttttgacaaaggtgccaaggcaattcaatggggaaagaatagtcttttcaacaa
atggtgctggaacaactggatatccatatgcaaaaaaatgaasttmgacccctacctcacaccatataca
aaaattaactcaaaatggatyatagacctaaatgtaaaanctaaaactataaaactyttagaagaaaaca
taggagaaaatcttcgtgaccttgggytaggcaawgatttcttagatatgacacmaaaagcacaagcaac
aaaaggaaaaattgataaattggacttcatcaaaattaaaaacttctgctcttcaaaagacacyatcaag
aaaatgaaaagacaagccacagactgggagaaaatatttgcaaawcatatatctgacaaaggacttgtat
ccagaatatataaagaactcttacaactcaataataaaaagacaaataacccaattaaaaaatgggcaaa
ggayttgaacagacatttcwccagagaagatatacaaatggccaataagcacatgaaaagatgctcaaca
tca
>HERV49I   LTR49 - a consensus sequence.
gtctgaaaatggctgggaacccgagacacataagattttaagcagcacactttttgttctgaatgtgtca
agctctcaggagggtttgtcttaagaagtcccatccataaggggcttttgtcatctcaacccttgttgcc
tggttagtcctgggaaagtccaatcccaggagggcctacccggtgtcacggattaatgggtctgtgactg
gcagccccccacaaatttgtgggttactggaggcaccgtacgcacaaacaccatccttaaccatctgtgg
caacaagagtcttttgctatcttagcctattcctgggagtaaattttttgagaatcattgggattgcctc
ttctatgccctctccaggaacacctcttgcttatatggtaaaagttattctaaacctggaaaattacctt
ttgggctttccatgaagaggcttattggattgagtcgctattggaataagtacaccattgaaaattctaa
ttgtcaatggccaaaagatggatcctttaaattagaaagactcctaaatttaaaaaaaaaaaggatttta
gagatctcttattctaaacaattgccttatttgtattgatgggaagatcaaatttaaaaaaagacacata
atagtgtcatggctagccttaaaaattctcttgactaaattaaagagcaaaaatctgacctaaaacaaag
ttaaaatcttttgtacgctcaaactgcccgctttggattccctgcgggattaacaatgaaggccactcca
tcttgtagtctggtggttaaaattccatactttcaccaccatggcctgggtttgattctcggt
>L180_5   L1PB or L1M1 LINE1 repetitive element 5' end - a consensus.
tttttttcccaagatggcggattagaggcttttagtatgcctcagccacttggaaatggnaaaatagtgc
ataaagatcaactctgtgagctttaattcaagaaggaaaatgggaatccaccataatcgtgaaggacacc
ccagatcctagggaggagaatgtnggcaaacagcccctatgatggcgtccagctgataaaagtgagtgaa
gccccagtacgcgagagaggcagagagtctccctctgtgactcacttttccactggggatccgagcaacc
caggccaagggagaacactttgtttctcccaagccctggagctaacgtggggagaggcttggagatgctg
tgagggaaagacaccgggaaaagctgcagacattttcccagacctaggamcaagagcaggatgccatttt
taatccgggcgcatacaaagtcagccattctttggcgacccggcagcgtggccgcgcaggcattttagtc
tcaggccagagattggagcgcctgctctggagtagggtaggggcctccacagccagaactgtgaaaagcg
cctcagcagtaggcgctggaattgtgctctcccctactgcaagcctggggcgggaggagagctgctacag
ctgcagtttctcctgggcggcgagacttgcagccagggccagcttggcgacctggaactggtctgtgtgt
gccattgctgggtgccccagcctgctcccctgagatcgtggtgcagsggggccctctctgctccacgccc
aggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagccgccccacccttcctg
kgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctccaggcattcagagcac
ccgctcgcctggwtcagcagcctgagccgccccacccttcctgkgcatagatcgtggtgcagsggggccc
tctctgctccacgcccaggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagc
cgccccacccttcctgkgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctc
caggcatctggagcacccactctcctggattaggagtttaagccgccccacccttcccgtgcagagaact
tggggctgaggaggtttccctgctccacgcctaggcacacctctgggcgcttggtggctgcccactggat
tctcccttggcgctggcgcttgtgcccgccatgggagatctgtaggcggacctgcctagtccggccccac
ccatcttggmccccgcccctccagggctgagcagrsagttcagancactntgcattccatgcatcagccc
attkcctgaggcaacagagagcttctnccagtaaacaaggatcaaatatatacccagccacactggccgt
agctagctcttacctataagcgccatctactggcttgtaggtcaaactgcacwgcccaatataaaacctg
ctaaaagaagtgcatagggctatagaagcaaagccaaaagaccatacccagcattctctacagtcacacc
mcctagggaggaggagaaaggaaagggaaagaaaaaacaccaataatattatagggaaagaaagaaaaga
aaaaaccctactcncatggaaataattacaaaaattagaagtgccagnatctccagatgagaaggaacca
gcacaagaattntggcaccatgaaaaatctgaatgtagtgacaccaccaaaggatcgcactagctctcca
gcaatggttcctaatcaaaacggaaactcagaaatgacaggcaaagaattcaaagcatggatt
>L1PA16_5   Primate L1PA16_5 LINE1 repetitive element - a consensus.
tttttttcccaagatggcggattagaggcttttagtatgcctcagccacttggaaatggnaaaatagtgc
ataaagatcaactctgtgagctttaattcaagaaggaaaatgggaatccaccataatcgtgaaggacacc
ccagatcctagggaggagaatgtnggcaaacagcccctatgatggcgtccagctgataaaagtgagtgaa
gccccagtacgcgagagaggcagagagtctccctctgtgactcacttttccactggggatccgagcaacc
caggccaagggagaacactttgtttctcccaagccctggagctaacgtggggagaggcttggagatgctg
tgagggaaagacaccgggaaaagctgcagacattttcccagacctaggamcaagagcaggatgccatttt
taatccgggcgcatacaaagtcagccattctttggcgacccggcagcgtggccgcgcaggcattttagtc
tcaggccagagattggagcgcctgctctggagtagggtaggggcctccacagccagaactgtgaaaagcg
cctcagcagtaggcgctggaattgtgctctcccctactgcaagcctggggcgggaggagagctgctacag
ctgcagtttctcctgggcggcgagacttgcagccagggccagcttggcgacctggaactggtctgtgtgt
gccattgctgggtgccccagcctgctcccctgagatcgtggtgcagsggggccctctctgctccacgccc
aggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagccgccccacccttcctg
kgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctccaggcattcagagcac
ccgctcgcctggwtcagcagcctgagccgccccacccttcctgkgcatagatcgtggtgcagsggggccc
tctctgctccacgcccaggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagc
cgccccacccttcctgkgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctc
caggcatctggagcacccactctcctggattaggagtttaagccgccccacccttcccgtgcagagaact
tggggctgaggaggtttccctgctccacgcctaggcacacctctgggcgcttggtggctgcccactggat
tctcccttggcgctggcgcttgtgcccgccatcgggagatctgtaggcggacctgcctagtccggcccca
cccatcttggmccccgcccctccagggctgagcagrsagttcagancactntgcattccatgcatcagcc
cattkcctgaggcaacagagagcttctnccagtaaacaaggatcaaatatatacccagccacactggccg
tagctagctcttacctataagcgccatctactggcttgtaggtcaaactgcacwgcccaatataaaacct
gctaaaagaagtgcatagggctatagaagcaaagccaaaagaccatacccagcattctctacagtcacac
cmcctagggaggaggagaaaggaaagggaaagaaaaaacaccaataatattatagggaaagaaagaaaag
aaaaaaccctactcncatggaaataattacaaaaattagaagtgccagnatctccagatgagaaggaacc
agcacaagaattntggcaccatgaaaaatctgaatgtagtgacaccaccaaaggatcgcactagctctcc
agcaatggttcctaatcaaaacggaaactcagaaatgacaggcaaagaattcaaagcatggatt
>MER115   Medium reiteration frequency repeat - a consensus.
aaggctccactctggccctcctccngctncatgcccttccccanggggtaaagagtctgtggggccaagg
ggatatgcccaccygaaayccatgcccccctttctagaccacgctccaggtacctgggactccagaattc
cctgtccanatagccccgagcctgcttccagggccttcttccytttccctaggtctgtcctccagagggt
ggaccgtgccaccagtgtgggcacccctaggcctgagagatggccaaggggtagctgtttgtaggggggt
tagntgtggacagagcttggacatgcgggctggggtgtccacatacatgcanaggaggccccttatggtg
taggatggagcygggggtgggaagagaagggggagtaggccaggggccaggggctggctctcccccaggc
aggctgccatgttctggcatggaactccaaggagtctgagaattctaaatttgaacctggccttccaggt
cattatgaaggtatatttgtcaaggtaggagaatagaacatattttaatttaacagtttgttagcttgat
ttataacttttaaatatttagacatatggtatgtgggcctccatttgtactcttgccctaggccctrcaa
atgttaggggtgggcctgggttctg
>L1MD_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggca
>L1MD_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggcaaaagac
ataaacctacagatagattcaagaagctgagtgaaccccaaacaggataaacccaaagaaatccacacca
agacacatcatagtcaaacttctgaaaactaaagacaaagaaaaaaaaatcatcttgaaagcagcgagag
agaaatgacaccttacctataggggaaaaacaattcaaatgacagtggatttctcatcagaaaccatgga
ggccagaaggaagtggcacaacaattttttcaagtgctgaaagaaaagaactgtcaacccagaattctat
atccagyaaaaatatccttcaggaatgaaggggaaatcaagacattctcagatgaagaaaaactaagaga
atttgttaccagcagacctaccctaaaagaatggctaaaggaagttctctaaacagaaaggaaatgataa
aagaaggaatcttggaacatcaggaaggaagaaagaacatagtaagaagcaaaaatatgggtaaatacaa
tagactttccttctcctcttgagttttctaaattatgtttgatggttgaagcaaaaattataacactgtc
tgatgtggttctngcnaaaaatgtatgtagaggaaatatttaagacaattatattataaattgggggagg
gtaaagggacataaagggaggtaaggtttctacacttcacttgaactggtaaaatgataacaccagtaga
ctgtgataagttatgtatatataatgtaatacctagagcaaccactaaaaaagctatacaaagagatata
ctcaaaaacactatagataaatcaaaatggaattctaaaaaaaatgttcaagtaacccacaggaaggcag
gaaaaagaaaacagagaaatgaaaaacagaacaaacagaaaacaaaaaataaaatggcagacttaagccc
taacatatcaataattacattaaatgtaaatggtctaaatacaccaattaaaagacagagagattggcag
agtggattaaaaaacatgacccaactatatgctgtctacaagaaactcacttcaaatataataatatagg
caggttgaaagtaaaaggatggaaaaagatatatcatgcaaacattaatcaaaagaaagcaggagtgg
>L1PAXX_5   Primate L1PXX subfamily 5' end - a consensus.
ggggtggggccaagatggctgactagaagcagcwgcgatcggaggctcccatggaaaagaaccaaaacag
tgtgtaaatcctgcaccagcaactgaggtatccaggttctctcatcaggactgactaggcagctggcatg
acccatggagaggaaggaagagcagtgtggtgtggcggcccacctgagagccacacggggcaggggagcc
cccaccccccagccaagggaggcagtgagtgagcatgctacccagcctgggaaaccgtgctttttccacg
gaactgtgcaacccatggatcrgaagatcccactcrtgaacccacrccaccagggcctagsgtcccaacc
ccggagctgtgcagattctcaacagcctctcagctggaatctgcttaagcctaccgagctcccgggggga
ggggcgaccagcaccacagctgcagctgcctgctgtctaagccatttgagctccttgggggaggggcagc
agccagcactgggactcacaactgcctaacacnctaagctccctgggcaggggaagggcagcatccatct
ctatagctccaggctgtgcttttcccctgctggagccagggaggct
>L1PBA_5   Primate L1PBA_5 LINE1 repetitive element - a consensus.
acaaantagggaaaaatggcggataggaggcaggactaaattgcagctcccactcggatggacagagcag
catgtggagactcacatcgtgaacttttgctccaagaaccaccgcaggaatataycaagaaagccgagag
aatycacagaccctctgaaggaagcagattgctcctgcargayccaggaaacggcccaaaaactgtgagt
gcccaaagtgtgagaagggraaaatctgcccccgaacacacatcctyactggggaacctgaagatccaga
tcacaggagaaggatttgaccttacctggagctgagacaatttagagggccgagcaaaatacaggggtag
aggaagcagtgggaaaagccctgtgggctctccgggtccccagggaagccatttctgactttgtctcaca
ggggtccctggggagggctgccagwggaactggggaaaggccacagggagaaggaaacctccagctgaac
tttgtaacaattccgaccgaacgcgaagtttcctggccagaactcaggggagggcgtgaatccggwgtgc
agactcagcacagaagccgtggcaggcaggaggcgcgaagcctgaaagccctgcttgctttctcagcwgg
gaggctggtagcctggggcaagttctcagccctgctcaccaactgcctggaaataaactcggtgctgttg
tgggggggcacggtgggagtgagaccggccttttkggttgcatgggagctgggtgaggcctgtnactgcc
agctttcccccacttccctggcgacctgcatgacacagcagaggcagccataatccccctgggaacgtaa
ctccattggcctgggaactacacccccatccctcacagtagccgcagcaagccccgcccaaggagactct
gagctcagacatgcctaaccctgcccccacctgatggtctttctctacccaccctggtagccgaagacaa
aagacataawctcttgggagctctayggccccacccatcgcctgagaaacwgaaatayttaycywggcma
mcttagggcaagcttrtatccwccctatactrtcgcagctgatgccctcttgaaagcgccacctcttggc
tggaggccaaccaactcaagacattacagcaaytcayracagaataaccctgcccctarrraaggagaaa
acgacagctatcaccactgcctgcaacatcctggctaaccagaggtcctgagtctgtccacgtgayaast
tcactrctakyataaccagcattcgagaaarccagcacactaagtctatctacaaccaaggaatctcaca
gagtctayttcactcccctgccacctccatcagagctggtgctggtattcaccgctgrgagacttgaaga
caggtcacatcacwggatycyttgcagacattccccagyaccagcccggagtctggtagctccactgggt
ggctagayccagaagagcaataacgatcactgyagtccggctctcaggaagtcccattcctaggrgaagg
gggagagcaccacatcaagggaacaccctgtgggacaaaagaatctgaacggcagsccttgagtcccaga
tcttycctctgacatagcctacccaaatgagaaggaaccagaaaaayaattctggtaatatgacaaaaca
aggttctttaacacccccaaaaratcacactagctcaccagcaatggatccaaaccaagaagaaatcyct
gaattgccagaaaaagaattcagaaggtcgattattaagctactcaaggaggcaccgaggaaggtgaana
ccaacttaaagaaanttanaatataatacaggatatgaatgraraaatctycagwgaaanagatagcata
aakaaaaaacaatcamaacttcwggaaatcgaagyacacttatagaaatgcgaaatgcwctggaaagtct
carcaatagaatngaacaagcagaagaaagaacttcagagctcgaagacaaggytttcaaattaacccaa
tccgacaaagacaaagaaaaaagaataagaaaatatgaacaaagcctccaagaagtctgggattatgtta
aacgaccaaacctaagaataatcggcgttcctgagnaagaagagaaatctaaaagtttggaaaacttatt
cgnggaaataatcgaggaaaacttccccgrcsttgctaragayctagayatccaamtacaaagaagctcw
awraaca
>L1MCA_5   Primate L1MCA_5 LINE1 repetitive element - a consensus.
ttaakatagngaatnttcttcaaaatnnatanntanaaaacgataacaggacttctagtttccggtcccg
catgtaaggagcttgaaagttgccactccatcctaacaacaagtaaaaagctgaacaaactgaaaaatca
acaactcttcttagatccgtaagagaagtgaggtcatagggcaaaccactgcccccagaattggagagac
aaacaggtgaatacagagaatcacaacttaccggagcagaaactcataagcagaaacctctgtgggaacc
agtaccggggtaggaaaacctgaactgtaattgacaaattgctggaggctcagtgtggacaagtctgaga
gttgaaaactccaggggancccagtcattaggtgacccccacacttttgtgagttttacctccaggagcy
tgaccaggttctcacagtgaatatcggagaaaaatccccttgtgcttccggcaagaggagaggaaaagga
acaattctgaaatataccasagcattctgttcttttaacaaagtcctgccctcaggagaaactatttaac
cagagcctaacctgttagagttttwtcagagcctaaccgacctgggggaagggaaatacccaactccagc
cccctctagccatcctgtcccacctaaagggagaaaaaaagctaagaaacacttgtgaagttcacagycc
aggngcacaggctcactaaaagactgagaactaatcataggactatagaacacttccctcccccncatac
cttaccaccacattactaaaagcctatttacaacagttccttttacccagtacatcatgtccggctttca
acaaaaaattacaaggcatactaaaaggcaaaaaaaaaaaacacagtttgaagagacagagcaagcatca
gaaccagactcagatatgacagggatgttggaattatcagactgggaatttaaaataactatgattaata
cgctaagggctctaatggaaaaagtggacaacatgcaagaacagatgagtaatgtaagcagagagatgga
aactctaagagaagaatcaaaagaaaacgctagaaatcaaaacat
>MER97   MER97 repetitive element - a consensus.
caggcagtcctcgctttgcacggttccgatatgcatgaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccacggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactacataaataacagatgcgcatcatgatcagtga
ccaatcacatcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattcgaatcaaacgtaaatggagttatagaagaaatagctgaccgtgggaatgttgacac
tgccgccatttgagagactctagatatgcagccagaggaacttagtgaaggcgaacttatcgacataaat
gaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaagtgacgccagcaaaaaacttcacat
taaaggaactcttggagatatttcacgacattgaaagcgcaaaggataaaatgttggaagctgatccaaa
cttagaaaggagtatgacaatttgccaaggcatagaaaagatgcttactccgtatcgtaagttatataaa
gaagaagaaggcaagcactgttcaaactactcttgataagttttttttggtttgttttgataagtttttt
tacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattatagtgtactaaataaatat
tagttttattatttttttcattccctatacatttataaccgacggtaagagagtttttaatgtttttgac
aaaaatttttaaaggtcacggaacaattataattttcccattgattattaagatcgctttgcatggtttc
agcttgcatggtcatttttacggtcccgtactaccgtgcaaagcgaggactgcctg
>LTR34B   MER4I-group; a consensus sequence.
tgtgggagaccagaatatgccaccccaaaatatgcctctttggcataaggaytgttgagctgaaggcaat
taagaagaagcagatgcaggaaagctctctgccctccctctatttgcctaaaagcaggacatagatttac
aaagacaaaaggtatcctgcccccaccccttctaccagggagaacaaaggttaaccactgaagacaactt
tagacccttattggcctggagatggtaccagaggaatctacattaacaagccttactaactagcctttat
ctgccagttatttgccttcccacaagttgctgcccctagagactcaaagtccttttcctttgtcttgtca
cttctctaaaaatttnttttactgttctttgttgaagatgctatataagctggaattcaaagccacctct
ttgagaactactcattctctgggtgtctcccatgtatatatgaaatatacatgttnaaaaataaanttaa
taaacttctgtctgtttttctcttgttaatctgtcttttgttacaggggtctattccaactaagaactta
tgagggttgaggagaaaaaattatttttcttcccctaca
>MIR3   MIR3 SINE element associated with L3.
ttctggaagcagtatggtatagtggaaagaacaactggactaggagtcaggagacctgggttctagtcct
agctctgccactaactagctgtgtgaccttgggcaagtcacttcacctctctgggcctcagttttcctca
tctgtaaaatgagngggttggactagatgatctctaaggtcccttccagctctaacattctatgattcta
tgattctaaaaaaa
>LTR3   LTR from human DNA related to mouse mammary tumor virus (MMTV) 3' LTR.
gttggaggccgaaagaatagggtcgtgaccaactcagtataccactggaggctatatgagcaaacagcaa
actgttctcatgaatgcaggatgctggcaagctgacaactgcatctgccaccagaaggaatgctgagggc
agtcataccccacgtgcagtgttccttgtggttatctataggaatatctggaggctgttgtataaagaaa
gcaattatgtgagcccgtgataaatcaagcagctgaccaaccattacctcttcctccctgttgattctac
ctaataaatacaaagggctgtagaagctcagggcccttgttccctagaagaaaggagccgcctgtctcct
tctttaaaacagatctttttgtctttgtcttcatttctgcatttgttctcttttgttcagtcccaaaccg
acagccata
>LTR4   LTR from human endogenous retrovirus ERV3, POL-ENV-3'LTR region.
gaagcaggaaatataaaaggaaaaacaagtaaagggaaaacaagtcctttcctgaccagtctgactcact
ccaaagtcctgctggagctatgataattatctgcaaggccaggcaggggctccgaaggagggctccagga
gcagggatgagaaaaacaagttctccttatcagtttccctgtttgaaattctctccccataacattattc
tttgttctgctctcacaactatttttgtaactatttctgcaagtctgtaaagattttgtaagttcttgtt
tttctttctgtagcatggcaaggtcacaagacatgtttaagtaaggtaggctcatgttgcaaatcctgtt
gtaaaacctgtcacggtatgattaactgcctttgttctgcttctgtaagactgctttctcacctcgcagg
ttttgcgccaaaaacccgacttgcccctgcctgatgcatgtataaaagtcaagcccgtctttgttccggg
ctcagcctttggatgttaatccgctgggccagtggccacctaaataaaaccttcctgttgcacccagtga
tctctccggcctcctgatacccacaaca
>LTR12   LTR from human ERV9 endogenous retroviral sequence (HRES-1/1).
tgtatctagttaatctggtggggagttggagaatctttatgtctagctaagggattgtaaatacaccaat
cagcactctgtatctagctcaaggtttgtaaacacaccaatcagaaccctgtgtctagctcagggtttgt
gaatgcaccaatcagcactctgtatctagttaatctggtggggacttggagaatctttatgtctagctaa
gggattgtgaatgcaccaatcggcactctgtatctagctcaaggttgtaaatggaccaatcagcactcta
tgtctagctcagtgtttgtaaatacaccaatcgacactctatctagctaatctagtggggacgtggagaa
cttttgtgtctaactcagggatgtaaatgcaccaatcagaaccctgtcaaaatggaccaatagctctctg
taaaacagactgactttctgtaaaatggaccaatcagcaggatgtgggtggggccagataagagaagaaa
agcaggctgcctgagccagcagtggcaacccgcttgggtccccttccacactgtggaagctttgttcttt
cgctctttgcaataaatcttgctgctgctcactctttgggtccacactgcctttatgagctgtaacactc
accgcgaaggtctgcagcttcatctgaagcagcgagacacgaacccaccaggaggaacaaacaactccga
tgcgctgccttaagagctgtaacaccgcgaggtctcgagcttcactcctgagccagcaagaccacaaacc
caccagaaggaagaaactcaggaaaacagccgaacatcagaaggaataaactctggacacaccaccttta
agaactgtgacactcgctgcgagcgtctgtggcttca
>LTR13   LTR from a  putative human endogenous retrovirus.
tgtgggccgcaagccagggagctgcccaggcaagagcctgaaggcacaagctgttccagtacagcaaaga
aaataattagaataagaaaagttttactagagataggaaacggataggattatatctgactattattaat
cattagtttgtagcatcactctttgttctattaccataatgatctctgttctattatgattaccttgggg
gaaaccaggccacacagagttaggagctgaagggccacagtgagaggtgaccagaagacgagagtgtgag
ccctcattcacgcccagagaagggccgctggagggctccttggcctagcggtaatgccagtgcctgggaa
ggccctggttacttagcaggccttggtctagcggtggccccagtgcctgggaaggcacccgttacttagc
agacccggaaaggaatctccctctctccaggggagacagagaacgctccgctccaccacctcttgtggga
ggtctgacattagccaggccgggccgagtcatccggaggctccaacgtctgtctccctgtgatgctgtgc
ttcagtggtcacgctccttgttcactttcatgttcagcctgtgcacctggctcctccttttaagttctta
gaagacagcagtagcagaactagtaggagtaccacagtcttcgatctttctgataagtgcatagaagaaa
cgctgacgtttgctgtcctccctctccacctcggctaccacaaagggaaaggccccctgtccagtggaca
cgtgactcgcgtgacctatcgatcattggagatgactggcactccttaccctgcccccttgccttgacta
caataaatagcagcgcctccaggcactcggggccactacctgtctgtctccgcgctttggtggcagtggt
cccccgggcccagctgtctttcttcctatctctttgtcttctgtctttatctcttcgatctctcgtctcc
gcacacacgcgaagagaaaacccacagacccggtaggggtggaccctaca
>MER21B   a consensus.
tcaacacacaacacttctgtcaccaaacgtgtggrrrtttttccccacacacaaacaaktcttcagttct
gcggcggacaccarctgggtgtcctccaattcarttcagttctgacactawctacctrgagatagcgtca
gatcccacaggtttaagggctcagtcccacaagactgcccccacttcagatrccagtcgcaagtctrggt
tktcacccgtacttctgaccaactggctataaattgttcccacgacccctctttaggttcgattaatttg
ctagaatrgctcacaraactcagggaaacacttatatttaycggtttattataaaggatattacaaagga
tacagatgaacaaccagatgaagagatrcatagggcgaggtmtgggagagtccngggnncaggagcttcc
gtgccctctctggstnnrccaccttccwggcacctccacgtgttcaccaacccggaagctctccgaaccc
tgtccttttgggtttttatggaggcttcattacgtaggcatgaytgattacatcantggccattgattat
caactcaacctycagcycctctccyctccccagaggttggagggtggggctgaaagttccaaccytctaa
tctgccttggtctttctrgcgaccagcycccatccwgragcntnctaggggctgcccrccakgagtcgmc
tcattagmacaaaagrncrtynctattacccaggarattccaagggttttaggagytctgtgtcaggaac
cggggtcaaagaccaaatattagat
>MER39   a consensus.
cataattccgggttctcagctcctataagccttgctgtttcctgagtgactaaaacnataagnatatctt
ttgttgaantatntggctttttgtccttggttcatgtagcagctttggaacagcttcagagcggtaaagg
tganggacagncttttgttanaatgttggggcgctctaagcctcagaagcagncctcagraaacagaann
tcattttctgaccttctctngccctctaatcwtymcccgcctttctgtcttrgrgctgsccgtaaagaaa
ttwtctgacctatctcgtctgatwgtaggtcataagaccctcattccagaaggggtcccgccctataccc
gggaggaaggaatgccgcacagakagaccaagaagaatacgaacagacaagccttgctgggttyccacac
ycagtytatkaccattagatcatwccccttttgtcyaatcacatttctgcgcagctntccattcttcatc
aaatctaarcataaaaatagagttttccctgagtmtttgkgtcttcatttctgaaggctcycatgtcaca
taaaactttgattaaataaatctrttatgcttttctcttgctaacctrtnttttattataggagtgtnng
ccgtgacccttatgatgggtagggaaggnatcacacctttctgcccctacagnnntaatgccc
>MER4D   internal sequence belongs to the MER4I group; subfamily MER4D.
tgtaaaccaaaaataaaatcctaagccccccaaccgactgaacggatccctctcttggccaaggggaccc
caragaaacctgaaaaactaattcaggccataacgggaagtggggtcagacacgcctcattatagcctcc
tccctttggagttcaggcacaactgaccagcattaacattaaaacagagatcataagactgacaaaacag
actntttgtagcaataagataccacgaggacgaagytctkatttttttatcttgcccaaattcctatgta
aggggtctagggagtcgcgccttacaaaccatgaattctcattagatgggttttattaaaccctgtatat
cgtgacttaatttccaacctgactctggtatagcatcacatgacagatagcagaccctgaaggaaatcaa
aatattttaccccaaaatatatttctttgacatattttgaaatggccctgcgaagctgtctcttgtgggg
aaaatctgcattctgtagagaatctctttccctttctaggtctttttccctgatccaggggagaataact
gagagtctggcaccttttaaggtctgataagagaaawttaccatctattctctctgaagcctgctacctg
gaggcttcatctrcatgataaaanccttggcctccacaactccccttatcttcactcgattgatttcaay
tctttagacagagcttaactctttcaaccaattgccaaycagaaaatctttgaatccacctatgacctgg
aagcccccgcttcgagttgtcccgcctttcckgrgcgaaccaatgtacaccttacatgtattgatttatg
tctttgcctataagttccgtctccctaaaatgtataaaaccaagctgtancccgaccaccttggrcacat
gttctcaggacctcctgaggctgtcacgggccatggtccttcactttggcaaaataagcctctatttaaa
ttgattaaaatctgtctcggatattttttgctttaca
>MER39B   MER39B - a consensus.
tggttggggctcagaaaacaataccgcaaaatgaaggcctcagaagcaaartttttctctgaccttctcc
cgccctcctgtctctcagtcccattctcccctccccgaggctagccatagaaactagaatctctcttccc
caaggcaggtcatagaaaccagaacycctttcctscaaagccagccataaaacctaaaaatattactcta
actttccctccacctttctgtgtaaaaactggccataaagaaattatctgacctaccttgtttgattgta
ggtcataagacccccattccagagagggccccgccctatanccggaaggaatgcgtgctcagagaagcca
agaagaatctagacagacaggccttgctgggtttccccactcagctcattagcattrgatcatrgccttt
ttgtccagtcatatttctacacggctgtccattctttgttgaacctaagcataaaaatggacaattttcc
ctgtatctttgggtcttcattctgaaggctcccgtgtatacagtgtatacatgttarataaatgtatatg
cttttctccattattctgctt
>HERVS71   Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 6106 characters]
gtaaccctggccacataccctggaggattgacctggtcctcaacacttt
>LTR9   LTR from human endogenous retrovirus-like sequence (HUERS-P3, HuRRS-P).
tgatacaggagttaaaaagaaattatttaggcagatagtgagggtaagggagtcctcggtaaggttttcc
ttttaacgaaaagcagcccccaaatcattttcttttctaacaaagagcagcctgtaaaatcgagctgcag
acatagayaagcaagctggaagcttgcacgggtgaatgccggcagctgtgccaataggaaarggctacct
gggggcyaggcatgttcaanatggnggctccatcttcccttctctttgtcagccacgtgtacagtaagga
gcagacaacatggcgccggccargtagagagcccatttgcataataaaagattagggtggggcggccagc
cttccccgcgcgctatgyaaacgkcacacctggtccaaccaatctntgngccctatgtaaatcagacacc
gcctcctcaagcycgtctataaaatccgntgcatytgccaccagccggncttttccactcgggnacccct
ctctctnnagagagagagagctgttctcctttctcttttcttttgcctattaaacctccgctcctaaact
cactccttgtgtgtccgcgtccttratttycttggcgtgagacgacgaacctcgggtatttaccccagac
aacgangccgcttca
>MER70A   Primate MER70a repetitive element - a consensus.
aagcagattcgctaattaccagtcccaagagaagactcctactgcgtggagaatagcgaagatcatcact
atgccaaccaccaggaacttcttcccggnccactgcatcytgrgctacwgtttatgtccwccatgcactg
gtnacctcgcttacccgantccggtgagacagaacgcgcgcacacacaagttacgcgaagcgggtttatt
acttacagacaggcagcaagggacaacagaagcctaggattcagggtragyymgtcycccaaggctcagg
aaagctgcccagggcggatggaatcttgwctgcgcgtgccccacttgcactgcagctgagggrccccgga
aggcaccccgccctgggttttatacctcaggaacmacatgacacgctgggctaaagcgttgaaggacatc
ctgtttcyaggagaganwggaacagagcccaggctgttcnggccagttcctccctatctcaggatgttgc
attcccagcacattctacagttattcttgagaactacaagcaagaaagaggggagwactgggtcggtcca
aggccacctggrgaactgtcctgcagagctatccgag
>MER70B   Primate MER70B repetitive element - a consensus.
aagcagattcgctaattaccagtcccaagagaagactcctactgcgtggagaatagcgaagatcatcact
atgccaaccaccaggaacttcttcccggnccactgcatcytgrgctacwgtttatgtccwccatgcactg
gtnacctcgcttacccgantccggtgagacagaacgcgcgcacacacaagttacgcgaagcgggtttatt
acttacagacaggcagcaagggacaacagaagcctaggattcagggtragyymgtcycccaaggctcagg
aaagctgcccagggcggatggaatcttgwctgcgcgtgccccacttgcactgcagctgagggrccccgga
aggcaccccgccctgggttttatacctcaggaacmacatgacacgctgggctaaagcgttgaaggacatc
ctgtttcyaggagaganwggaacagagcccaggctgttcnggccagttcctccctaamtcaagatrttac
attccctaggagggkcaagaacaaggccaasctgttccgggcagttcctccctatctcaggatgttgcat
tcccagcacattctacagttattcttgagaactacaagcaagaaagaggggagwactgggtcggtccaag
gccacctggrgaactgtcctgcagagctatccgag
>MER73   Long terminal repeat.
tgtcataaatttgtttaatacagttgctgcctcggcatccatttttaggcctgacataagttgtttgaaa
cccagtcgtaccccgtcacctttggcctagttaaaacntctcctccctgtgtggttgtttgcgatatggc
ccacttgttcctcatctcgctgacccaaaacccaacacaccccacagctgctgaccatgataaaacctaa
tggtcaacgccagagtcatgtaaataagtttcctccttctggcatgttttctttaaactagccaatccac
aacccccgtnggaaagcctgagggataatgcccatggaccttaataaaggcatactcccgcagctgctct
ctccctccctacccactggttgagctccctgccgcctccagacttcccatcggcctcccgtcggcacccc
taacctctctgggatctgtaagtaatamatttcttctgtttcatgcattttngtttcacttgcctcactg
tgtctcmcctgacacacacactcgaacctaactttcccccgggtcagggctctcctagaaaatggctatc
ttggcttatggccactctcaagagagagacctcaagaccaaattagaaagaaancataacgataaaaatc
acaaca
>MER77   MER77 repetitive element - a consensus.
actacggggggaggtgtcaaattcaaaggtctccaagacmaccctcctgtttartgattcgctagaagga
ctcacagaactcagaaaagccgttatactcacagttacggtttattacagtgaaaggatacagattaaag
tcagcaaagggraaaggcacataggncagngtccaagagarmcaggcacgrgcttccagttgtcctctcc
cggcggagtcgtrcgggcagcgcttaattctcccagcaacgrtgtgtgacagcacgcatgaagtattgcc
aaccagggaagctcacccgagccttggtgtccagagtttttrttgggggtcggtnanataggcatggntg
accccgcagcatggctgaccttggtcttctcaggcttgagccncccaagcatggctgacctnagttactc
agtctycagcccctccagargtcarryaccgtgtagcctaaggcccccaccataaatcacattgttagca
trractgtccggtatggcccaaggccytcgcagataaacaaagayactyttatcaggcaggacattccaa
gggcttagaggttatctcccarrgcctgaggataamcgagggccaganctttctttgggcaaggttaatc
ctttactgyayaagaccaca
>MER51A   a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacactgacttcctagaactnaat
caaanggaaaaccccaactttccacgtccamgtaacmaaaggaccagaggctactccctttrcannnnnn
ngatgaaaaattgaaagtacctctgattggtcccttcccgcaaccaatcaggctggtcgttggcccaagt
cttcatttgcataggagtataactttgtaacttcacttcagcctctgattgatwrctttccgcaaccaat
cagacgtttgcatagggtgtaactttgtaaytcgcttcagcctctgattggtcccctcccacaaccaatc
agactgatcgtgggccacctcttcatttacatagggcgtaccccaagtaaccaatgggaaacctctagag
ggtatttaaactccagaaaattctgtaaccggggctcttgagccgcttgctcgagcccgctcccaccctg
tggagtgtactttcgttttcaataaatctctgcttttgttgcttcattctttccttgctttgtttgtgcg
ttttgtccaattctttgttcaagacgccaagaacctggacaccctccaccggtaaca
>HERV17   Internal sequence of endogenous retrovirus HERV17.
[encoded data, 8591 characters]
tcgtcggccaacctccccaacagcacttaggttttcctgttgagatgggggac
>LTR18A   Long terminal repeat of endogenous retrovirus HERV18 - a consensus.
tgtaaggaaaatggmtgtgctkyrgtcaaggaataggccaaggcagacatccggtscagcatgactcagt
argtttggagtgcaggygcacaacyccackcattatgtaaccayrycdcatgarrcgcatakgtaatcac
ycacrtgagctcatacttggctcggagccactattgtctgtraaaggtataactgccctgctgacgctgt
gcacatggctcgcwyccacccagagagagaataaagccatgtctcaactgcctacggtccctcgagtgtt
ytttcagctacccgccacycatccacccactcccctcggacctcagcttaggctggaacctgacacttgg
ctntgaca
>LTR18B   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgtaaggtatatggatgtgctctggtcaaggaataggccaaggtggacatctgggccagaatgactcagt
gagtttagggtgcaggcgcatactccacttgttatataacctgtttgtgtaagctcatactgggctcgga
gccactattgtttgagaaaggtataactgccctgctgacgccgtgcacagggctyktgcgggcgcgcccr
aagaaaagagagagagccagagttgtccatcttgtagacggacaagggggagccagggctcggctcgctt
gccacccagagaaawgagttaagctgctaaccctgtaagggagagcctaccttgtaggccagggaatgca
gctgtgtgtgggagtggcaggagctgcagagctggagcagacagccgagataaaggtagacagtgtgaga
gagctgctgcgagagagctgctgatgagagagctagtgtgagtgagctgctratgaaagagctgctgaat
aaarccatattcactgcctacrgycccyygagtgttctttcagctatttgtcgcccatccacccactccc
ttcggacctcagcataggctggaacctgaccctgggtgtgaca
>LTR20   Long terminal repeat of endogenous retrovirus - a consensus.
tggtawtgaaaggagttagccagcttgctttaggcagacagtaagggaaagggtccccagagaacctccg
acccgccccacaagtgtttacaccagatgttttgtgcagataagggaacttgcacagggggcttgcctar
acatkcccacagtgaaaaattttwttcyttaacacatgckcagtaagaaaaataaatcaatatggagtag
ctcagactragggccyacatgcgcactggaaggatggggtggagccaccaggaattcgcaccttatgcaa
atrrggaaccagcctcatcagcttytstataraagcyctkgtattcaactgtgaagtggcaaccwgmaac
ctgctttcaggacccctctcttttgctgagagcttttctcttcctttcgcttaataaattctgctcyacc
tcacccttcaatgtgtctgcatgcctaattcttcctggtcatgagacaagaacctggatytagctgagct
aaggagcaaaaaccctgcatca
>MER74A   MER74 repetitive element - a consensus.
tgtattaaccatgttttttattttctgtattcttgatgctttgacatctggggccttgctgaccctggag
ggactgcccctcccagggctagccaattcctagagatagcaaacgactcgcctgggagcgcgcctttcat
atgcaaaccaaccaatccagagcccacacccccaaccacctcctttatcgggctctcacactctgggcca
ctatccccctgccctaatcaccccagggccaggtaccagacaactagggacagcccctataccccagagc
ccgctgaaattattcaaactagccaatcctaagcctgcttaccctgccttgcccattccttcccatggaa
accacaataaaggctcttgcccacgttttcccgtcgctccctctgcctcctgaccgaccctggtgcttcc
ccgtgtggccccccgtggcgtggcgtgcccccttctcttgggawctgtgagtaacaaactatcttttcaa
tggcagtcgtctcctgatctgttggccttaccatacctgaataataataaaacctacattttaaaaca
>MER74B   Primate MER74 repetitive element - a consensus.
tgttttcttagattctgtattcgtctatttggcatccgttcatcacagagncanttatattaaccatgtt
ttttattttctgtattcttgatgctttgacatcttggggccttgctgaccccggagagactgcccctccc
agggctagccaattcctagagatagcaaaggactcgcctgggagcgcgcctttcatatgcaaaccaacca
atccaaagcccatacccccaaccacctcctttatcgggctctcacactccaggccaatattccccctgcc
ctaaatcaccccagggccaggtaccaggcaactagagaccacccctgtaccccagagcccgccagaatta
ttcaaactagccaatcctaagcctgcttaccctgccttgcccgttccttcccgtggaaaccmcaataaag
gctctggcccacgttttcccgtcgctccttctgcctcctgaccgaccctggtgcttccccgtggggctct
gcgtggcgtggcgtgcccccttctcttgggaactgtgagaataacaaactatcttttcaatggcagtcgt
ctcctgatctgttggccttaccatacctsaataaaataaaatcccaggtacattttaaaaca
>MER88   Repetitive sequence.
cactgtattgtaaattttaaaaacttcmtattttcctgatgcctcaacatncccacaaacaggctgtgag
caccccgcccaggcgaccaggtgcaccagtgtaataaggctggtccctgctacaagttccccttcttgcc
ttcccctgactgtgacccagtgacattcaaacgcaccagtgaaatccccttacgccttktgcttgtgtsc
tccaccctgacccccagkaaaggcacttgcccgnnngttctctctctccctgcctcntaccngcttggtt
gagcccgctccctgggcactcctcccatccggccccctgcatggcatggcntgcctccctctctaggacc
tgtgagtataataaannctttaanttacgtctctctgagtgcaatttctntggccgtgctggagtgatcc
ttaaagaccccaccagaggnacttccccgtttacaacaca
>MER54B   Primate MER54 repeat subfamily - a consensus.
tgtngtaaatwcttataattttatgttgcctcagcatccattttgaatacaagtttgactttctcatacc
agaagcagggctcagtcacccttgacacggcttttagttctacaccacacccaaatggctcaagccggtg
gccagagataaaaacttggaggcatctctcccgcctggcagactgggctccccactttcccgccgcttcc
tttaaaaagaccattcaggcatttgcccgcnaacttaaagtgaccacaccctgttcccttatatatgctg
ctagctgtcatgctctctctgcctgactcttcattcctgcctcgcgtgacccggggacggaggactgccc
tccngactcattgcaccctccctgtccaggacctgtaagtaaaaatctttgaacttgtttcctattgtgg
tggtgtattgaatttgcgccttccatctgaagaaccaggggctgccccaggctgggttttccccgggatg
ccagggagaanacaaggtcaggctcccagtgccagagcgatggtcaggcaggcataaactggacacgggt
cagacaagagccacaagggcatctgccagtataaacaagtttcccgtgtgagggaccccctggtcgcagg
tcggacaactaggcattaggccgtccgccaggtaaaagaagtatcccgtgaaaggcacactgtaaacacc
cacgtccagctccccttcattttccattagggcagggttgctagctgctctggtactggaaccccaattt
agctgggggctctcaaaaca
>HERVH48I   HERVH-related endogenous retrorvirus flanked by MER48 LTRs.
[encoded data, 5183 characters]
tagacaggaa
>LTR29   Long terminal repeat of endogenous retrovirus - a consensus.
tggggctcagaaaccgataccccaaaatatggcgttttgwacatgctgaactgaagaagcctcaaggttt
ctctgacctccccccanancccccactgtctctcccnaatataagttgaagttcccttatctgcctaaag
tccagacccaccaaggagaacaattgttttttgttcccctccctgagtttatctcattngaatctattrc
aggaaagaagaccaaagaatgtaaccacacctgaacagaccctttttcaagataatgacttttgtcacaa
aycattgtctccaaggatcatttaaattccaaagagaactatttacaagttaatttctgttccyysatcc
aagatccawtcattctccctagtaatcatttattgcccctcaatagaattcctcttctcccccttcccat
aacctgttttaccaggatccaagcccccattctttctgtaacctcaagatggtatataagcttctgyacc
tcattgggaagttgggtcttcattctgaaggctcccatgtatacacgttaaataaatttgtatgcctttt
ctcctaytaattaatctgccttttgtcagttgatttttcagcaaaccttcagagggcca
>LTR20B   Long terminal repeat of endogenous retrovirus - a consensus.
tgagagaggagaaaggaagaaactggtcaggcaggcagttagggtgggtcctcggttgaattctttcaaa
caaaagaacagcctgcaggcacagataagggaacttgcacaggggggcttgcctaagacatgcccacagc
cgcacagataagaaaggctacacaggagacttgcccagacatgcccgcaatggaaaattccgtcccctga
cacatgtgcagtaaggggaacaaagcaatatggagtaactcaagctaagggcccgcatgcgcactaggag
gatggggtggagctaccagaaattcgtgccttatgcaaatgagacacccagccctcatcggtttcttata
aaagcctttgcattcaactgtaaaaatggcaaccctcttccgggccccctctccgcggcggagagctttc
ttctttcgcttattaaactttcgctccaacctcaccctttgtgtccatgctccttaattttcttggtcgt
gagacaaagaactccgggtgatacctcacaaggagagactgagagactgctacattgtggtgcattggcg
agactaaca
>LTR45   Putative LTR from retroposon related to the MER4I-group.
tgtaaccgcgggaccagcccaaactgggcctactctgttgataacaaaatgtcaagttaccttgtaggta
taacagagcccaaaactgcaagtcatgtagcccgggcatgtgcaatagaaaaagctttgacctctaacaa
cacccagaaccaatgattcctcccctcggaaccaagaagaccgggacatgaccggaacctgaatgccgga
actctttcagaagcaaaggggtccgttggcccggaagatctggggctaaaatctgcctcaacatacctta
ccgtaaatggtcaaatttgaagccctccaatcagaccctgccaagccaacattcctaaatcctttccctt
gccctctgatcccttaaaacttgccccagaccccaaatcggggagacagatttgagcccacctcctgtct
ccttgctggccggttttgcaataaagcctttcttttctcaaaagctggtgccatagttattggcttctgt
gtgcatcaggcagcaagcccatttgctcgataaca
>MER4BI   MER4BI LTR-retrotransposon - a consensus.
tttnncactnggaatttgggttnctanragtnaaaatantannagantaaaatgttttnnntnnagttta
taangayatgaggatgtgktttttgttgaaaaaaatgtatttttgtctnagntagaagttatttaaaagt
tgtttcaaaataaagggaaaaaattatataaataaaaataaatgrataaagagaaaaataaaaaggtggg
aaatgagaaacctttgactcctgggtggccahgtggtcacccatagtatagagctgcagctgdgctgtgt
tcagttactaaaggtaaaagttaccagtgaaatttagagatggatcatactcccagggagttggttcact
ggatgcataaggaaatgcaaactaataagncaaaaagcaaatatgcaatctcttggctattgttatctnt
aatagctaaaaaaaaaataaaagagtgctgggttgggtcttgatgctggaccaagctcagatgtvggtct
gtctnagctcaggccactagcctcaaagctacccacaaaaagaaaaattaagccaggacaacaaaaggta
cctctgagacctgtggttaccaagaagatagtcaatrtgggggaagggcaaaaccaagtaactattaaaa
ccagagggtataatgtaaaggaattgttccattttgtagattggtatcatcagcttcctgaaaaaccttt
actaaaatggattgtgagaataactaatttarggacagtatctttrrttttaaatgctgcagaatrgaag
agcatgtttgggttgatgcaggaccctacagctcactattgaacaatcactgatgrgtatatgtgatcca
aacacacaggaggttattcctgagagaacagccagcctagtggactggataaaagccactgtaaggtctg
tttaccctgagaaggggactgcccaactctccctataaaatgccaagtgagagcaccccagatgaagcag
ctgatatgcttcatatgcaagccatgtgggactggctttatgatgaccgggatattcacccactgaatat
gcctattacccaggtcatggtaaatgctggggttaagggggccccttttacatgggcaccccatgtaaca
ttactcctgcagaatcaaacaactgtttaagaagccttatcaaatttgctgtccctcatgggtcttacag
atgcttaataaaacattagawtaattaacaacaaaagaaaatggaaaaggaaaagggagtcaaaggactc
accccagaagsgtggtggaaatctttaaatggttattaagaaatggaataaattaaaattgatggggtta
aaacaaaggtctttacaacactatcaaaggttgggtggaccaaagggagcccctgctggtcccccaacat
taaagggccccaaactagttttctgtatttrctccagattggagaaatttaaaaaaaatcanaaggcaaa
gattataatgagaaagctgacattgcctggrgcaatgctgaggcaaatyaagataaagattgacaaaagg
gcctgagtcccttggctcaacyccctgctgggaacccaaatcctttttcaccagaaaaggtaaaatggtc
tgggagtagaraagaaaggttcctgggaccagaacataaaaatgtaaaggttgatataatgaaadatata
cmnttntnaaagsttgaattataaaatttgaaatgtttaaacakyggctttatgtaaagtagttgtaact
cctttacctaaatgtcttatgaaaatggntantgtatctaactgggggatgtttcccctatctagtacta
taaaacagaaggcatgtaaatctgccctttaagaaatgttaattggacatgctaaatgggaacyagtaag
attgcctaagcccacagaatatagggtagaagctggagtgctagtmgggacaaatcctccacttcatagc
cctttgtggagcatttacyggggcttatggcaaaagcctgtgagtacttcccaatgacaacgactgagac
tttggactagagaatttccacttgaggggcatttactgccttgctatgggatgttaactgaagctacccc
tatgctaatgaaaataatggtgcccaaaagagttccatgataaaataaaaatggtttatataggatcttg
ctacctgggaatgyaaggaggagatactcatgagcagagagcctcttttcccctaggactaactctaact
gtgtgaggagctgctagattctacagtgcctaataaacagctctcatytgacaagagctgcttggtttgt
gaatggcagttccaaggtaaacaaacaacatcttgtttggaaggctgctgctctggttaaagaagagtca
agaaaatctttttcttttaagttatttatagtttagagcaattgggtaaagtatgtttttgtaagcaaat
ttac
>MER50I   Primate MER50I repetitive element - a consensus.
tactttggtgccacgtgacttggatacgttccctagtggtaagagacctctatgcctcaccttctttggc
tggaggcgttcaacccccgtacgcggttttcttctcccctttcactctcctgcttactaaccaaccccca
gaacgattcctctcagccacagtggctctgctccccctggctgatctctcagctcaccctgacgggtggc
tcgcaggggtgggaaggaccttggagtccacaccgagtagacctgagacactaatggccctcctggacag
gaggctcatgagagtggtagggctaaagcctaagaccgtgcaatgtctggggtttcctctgctttttcaa
ctaaaattggctctttcccaaaaacccacaccgcctattctcctgttttctctgtgtgtgttctgaaatg
gccttgcgcacccgccggactgtccacctcgggggcaagtctgccttttctctgctttcactttgcatgc
cacgcgacttccttctctgccttaaacacacactccctgtttgttatttgtgcacccgcggctcttgctg
catttgcatggcagcaaagacacgggctcccttgtggatattccctgagatttatacttgtttttaccct
accagctcagatgacctccaacccttcctctgtctgttggctcattgccaggacagacactaatcggaac
cccggctctgccagcttcttatgacttaccatatacttttcattcctgttatgccccagggccaagtttt
ccggtggcttttgaagcagtttgtccgcctgcataggacctcactctgtggccctttaaggacctcacct
acttgctttttttgagttagcactcctttgggaggagggaaaattcttcctttgccatttgcgagctctt
atcccaagccccaagtcctccagaggttcctcctttatgtcaagagggcaaataaacgttgccctctcga
atccaagggctgctgtttttgcgagcatatgaaggctttccatgagtattcctcttgcttcctcccactt
cctcctgtagcagagggattgtcctgtctgcttaagcatttgttctgcatgttaccccaggaggacaagg
aaccccaaatacaaaattttctccattcctctaatcacttccatgcccttctcaatatgcatcaagacct
tcaaggtcatattcgaagggagggaagtccagccccttgcggcagttagctgaaaaacaggcttctcatc
tacttaaagaacatgggaaatggaatatgagaaaaaaagagataatcattttgttgctagaatgctccaa
gtgagagtcactataaggtcatggagacaaggatataggctggcccaaggccgcaggcacaagagacaaa
gtacc
>LTR6A   LTR from retroviral-like sequence S71.
tgtgataccttaccttgttttaatatgacacagactctcccttagctgagaaagccagacagactccatt
tggctccttcatttgcaagacatcaagggctccttacccacccccttcctcaaggactcgtgcaagctga
ctcccagcacatcaaggtagtgcaattaaccaataaggtactgtggcaagttatgtccacagttcccaga
aattcgcccaagtgatagtaccctaagcccccgcgtttgtgtctggtagatagcagccaaagccctcgca
cctatcaccttgtgatgtgatggatttaaagcccctgcacctggaactgtttgttttcctgtaaccattt
gtctttttaactttttttgcctgttttacttctgtaagattgctacagctaggcttcccctcccctctct
aaaccaaagtataaaagaaaatctagccccttcggggccgagagaattttgagggctagccatctctcgg
tcgacagctaataaaggactcctgaattaatctcaaagtgtagcgtttctccataactcgcttggttaca
aca
>LTR67   Long terminal repeat - a consensus.
tgtcattyttttggcnactcagcatttgaacacccttcctatgtttggggaatttcccaccttataaatt
ctacctctttaaggtagaagccagaaanctcattttcccagcctcccttgcagctagggtgcwggcatgt
gacctaggctccgccaatcagatgcacccatgcagcaagacttcaaattagaagctagtgatgcaaagaa
gcaggtgccatgcagaatccactcnngggtgagagtggcagcagctggcagagagttttcagaggcagga
gtggcagagatccaagtagtagtgtccagtgttcatgtgtggtgcaagtggtggtatgcagtgtccagta
gtagcagcagtggtatcctcactgtgaccagttctgcagtgtgatttgggcngcattgttcctggctgta
tagcctctaagcctggttctctagccctcctagagattctgtgagctacctaatatcctttaatattcct
ttaataaattccttttctgcttaaattagccagagttggtttctgttgtttgcaactaagaaccctgact
gataca
>MER4E   internal sequence belongs to the MER4I group; subfamily MER4E.
tgaggactaagctctgatttttttttttttntttttatcttgcccaaattcctatctaaggggtctgggg
agtcatgccctacaaaccataaattctcatcagatgggttttatttaaccctatatatcgtgacttactt
tccaatctgactctggcataacattacgagacaaggaagaaaatcaaaatattttaccccaaaacatgtt
tctttgccatatcttgaaatggccctgcaaagctgtcctttgtgggggaaaatctacatctgtaaagaat
ctctattaacatagctagatctttttcttccaggccttcccaatcctgaagagattaactaagagtctag
caccttttaaaggtctgaataggaaacatttgtcatctattstctctaagggcngccactatgagacttc
aaaagaaccttggtctccacaatcttttatcttaacctgaacatttcctttctattgatcccaggtcttt
agacaaactcaaccaattgtcaaccagaaaatgtttaaatttacctatagcctggaagcccccactttga
gttgtcccgcctttctgraccaaaccaatgtatttcttaaatgtatttgattgatgtctcatgcctccct
aaaatgtataaaaccaagctgtaccccgaccaccttgggcacatgttctcaggacctcctgagggctgtg
tcacgggccatggtcactcatatttggctcagaataaatctcttcaaatattttacagagtttgactctt
ttcgtcaaca
>MER100   Molecular fossils of HAT DNA transposon.
gattccagggtaakcttacaagacataaattcattcactgcatcattcataggcaagctaytrcaacaaa
gatgttgaarccagaggtacamaaaaggctgcatgacgttactaatgttaatgttataaaaacaaanctt
taatatcttgtacagtagaatctatataatactttgtaataaawtgggaartgaccatgaaaatcttttg
taccacacagaagtttgctagttatcttgtggcaaagtacttaattaagagttgtcaaacttaaagatga
gttatattnatttttctttttacaaaaagacaagtgttccaaatttgactgaccttttctgtgatgacaa
gtgactgtcagtagtatgctacctagtagatatttttgaaaaaaataaacgcacttaatctgtcccttca
aggtaaaggtgtcgatattttaacaatgagtgagaaagtaactgcttttgaargaaatgcacaatatgga
gagancattttgaaaatagatgtttggaaatgtttccattgttatatgattttgtngccgaaaatgatgt
aagtgtgatacctataaaaactctcatatctgcacactttaaaacttggaaacagaaatttctaacctgc
tttttaaaaatcttccaaatgaagagttttaagtgggttttgaacacatttgttaaaaatattaaaatgc
aacatcttccgattagtttgcaagaacaactgattgacatcagggaaaatggaaatttactagccaaatt
tcaacaaaaacctttgcataattggtagatgggattgaaaaatgagtatcatgatttagtaagcacagcc
aatgatatayttcttccatttggatctacatatctttgtgaggtatctttttcagctatgacagccatta
aaaccaagtattgaaataaagtaaaaaccagaccttcaaatcactgtatcaaagtgttaaaccaagattt
catattatyctagcatttaaataatgtyagatttttaaaaaaaagcatattcaatcatattctctcatta
aaaaatwaataataaaattttaatgaatatataaaargttttatatacaattataaaatwtaaattattt
taaawtatatttyatctttatctcatccttttaaaatttsttttntgtatatgctttataatatgcatan
taagagtagtacatgcatataatttawaaattaaaatacayatgttknaantayatgttcaaaatatttt
tatt
>MER102   Interspersed repeat MER102 - a consensus.
gggttgcaaactcaaatgcctacaggggccaggcaggtaacataaatgagtgaagtgggccaggtgggga
ctgtggcaaactggagagcacatgccctgtctaaagggggcagcagctgctactcagctccagccaattg
ttgccatgtgggaatgtaggcccagtgttgccagatcttctgatttttcaagagaagccagaaatctaga
tttttatgtgaaatctcctgatttttaaatgttggcaactaatttaaaatttttawaaaacactgtgtag
gccaaacaaaacatatctgtgggccagatttagcccatrggctgccagtttg
>MER108   Interspersed repeat - a consensus.
antacacctngcagttnnmncacagtttcactgtaaattttaaacacaaataaaaantccaartggtcac
atagaatgatagaattgaantaactcaagttctgttgtctttntttttacaatcactatgctatngttta
aatacaggaatatgtagtaccacaggggttggagacatgaantnactgtacccgaagtgagcttgaatgr
attctaaactattangaacttactctagaaacaaacatatgtagctgagtccacgtgtgttgggggccaa
ctgtataactggaagttctctnaattaacttccatgtagaatacaatgtttattaaaggataagtaataa
aaatgtgctaatttgaagtttacatatatattattaaaactcaacagtaactgcagcaattkgtttagaa
cttagaccaacaaaagattttttttttwgggaggagtattttatcactgacattgtttagaattgctggt
gcatggtgataataamaaagcagactgacttttagtcagttttattattgttaattctctacagacaatg
cacccccttattgcctgcacctggggcggaccactcccactgccctgcccttggtatgccactggtttcc
tac
>MER118   Medium reiteration frequency sequence - a consensus.
ataaaaataaaactattcacaattctagtattcaatatccatctagttgccaatgtaaagaatcagtatc
atacttcatgcatgttacatctagacctacatatatacaaatttaagagtaatatgaattgtttaatatt
gcaaaatgttcctcagctaccatgtgcaactgttgtgaatactgtgctaatttgtgagtacctctggaac
cacaaattggaacatgaagagaagcaagaaaatggacacttagcactactgggaaatgatactttgttaa
gttatgcaagaatctattgcattcatgctatctgaggagaggaaggatttgacaagttaattaatttgtt
ttcttttctcttacctaagtgcttctgctgctcaaatcctccctacactctaaagcagtgtctatctctg
acgtcancagcagcggcacaacccacaaaccttcatggcatttggacacagtcacnccttttgttttgag
gacanagggcaagagatgtggagaagcatttccctggggcctgaayagtgttagtcacannagagtagat
gtttagggttataggttgtgctgtgccagtactgagtaccagatcccaagtgacagaggtacccatgtgt
tctttatttaataaatgtatgtgtgtttgtgatatgtggggccctctaaagcatggggcccagggcaggg
gcccctcttgcctgggt
>MER111   Interspersed repetitive element.
atatatcttcagcattttgtacatgttctttaattttattcttttccttcacaattgagcacncagtnaa
ctgaaatataaaatgagactcngattttgntaaanatttatnattttgaccacatctaatnatttctatc
tttrtcycaattatattagattatsagacctacgcttctttttactagtatcagcacttttattttnata
tttwttttccactcatttttaataaataanngrnaaaatgcaataaaataktcatatant
>MER34   a consensus.
tawtgaaggagatcagaatatgccaccccaaaatatgccactttggcataaggattattttgagctaaag
gcacttgagaaacagcagrtgcaagaagagcactctgaccttcctcttttcttcctgaaagcaggagata
aaactcccatgtgaaagacgttctctctataccaggaggaaggaaacattcttatcgtcagagacgggga
gtcgaggccgagggaaatctgtacgaacaaaccttgttaaactaacyctyatcttcctagtcacttctcc
acgatgaaccgccctagcccaaacccctttgtcttgtcacgttttcacaatttactactctttgtccaac
ctagtatawaagcgttcgactctaaccgcttctttgggtcttcatttccttatgagggctcccatgtaca
tgtaaaacatacttaaataaatttgtatgcttttctcctgttaatctgtcttatgtcagtttaattatcg
ggcccagccggaaactctaagagggtagaggwaaaatttttccttcyctnccatgg
>L1P5A1   L1P5A1 - a consensus.
ggtggctggcaagatggccgaataggaacagctctggtctgcagctcccagcgagatcaacgcagaaggc
aggtgatttctbcatttccaactgaggtacccggctcatctcattgggactggttagacagtgggtgcag
cccacggagggcgagcagaagcagggtggggcgtcgcctcacccgggaagcgcaaggggtcagggaactc
cctcccctagccaagggaagccgtgagggactgtgccacgaggaacgrtgcattccggcccagatactat
gcttttcccatggtcttcgcaacccacagaccaggagattccctcgggtgcctacaccaccagggccctg
ggtttcaagcacaaaactgggcagccgtttgggcagacaccgagctagctgcaggagtttttttttttcg
taccccagtggcgcctggaacgccagtgagacagaactgttcactcccctggaaagggggctgaagccag
ggagccaagtggtctagctcagtggatcccacccccacggagcccagcaagctaagatccactggcttga
aattctcgctgccagcacagcagtctgaagtcgacctgggatgctcgagcttggtggggggaggggcatc
cgccattactgaggcttgagtaggcggttttcccctcacagtgtaaacaaagccaccaggaagttcgaac
tgggcggagcccaccacagctccgcaaancggctgtagccagactgcctctctagattcctcctctctgg
gcagggcatctctgaaagaaaggcagcagccccagtcaggggcttatagataaaactcccatctccctgg
gacagagcacctgggggaaggggcggctgtgggcgcagcttcagcagacttaaacgttcctgcctgccag
ctctgaagagagcagcggatctcccagcacagtgctcgagctctgctaagggacagactgcctcctcaag
tgggtccctgacccctgtgcctcctgactgggagacacctcccagcaggrgtcgacagacacctcataca
ggagagctccggctggcatctggtgggtgcccctctgggacgaagcttccagaggaaggaacaggcagca
atctttgctgttctgcagcctccgctggtgatayccaggcaaacagggtctggagtggacctccagcaaa
ctccagcagacctgcagcagaggggcctgactgttagaaggaaaactaacaaacggaaagcaatagcatc
aacatcaacaaaaaggacgtccacacagaaaccccatccgaaggtcaccaacatcaaagaccaaaggtag
ataaatccacgaagatgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaaccagaacgcctcttc
tcctccaaagaatcacaactcctcgccagcaagggaacaaaactggacggagaatgagtttgacgaattg
acagaagtaggcttcagaaggtgggtaataacaaactcctccgagctaaaggagcatgttctaacccaat
gcaaggaagctaagaaccttgaaaaaaggttagaggaattgctaactagaataaccagtttagagaagaa
cataaatgacctgatggagctgaaaaacacagcatgagaacttcgtgaagcatacacaagtatcaatagc
cgaatcgatcaagcagaagaaaggatatcagagattgaagatcaact
>MER60   5' part of L1M subfamily.
tgcagrttgctagtgccagagggagcaaagaattgtgattgtggattttaattgctggcagctccctgaa
ggactcacaagtctttttttctcggctgaagtggttcaaaaacatttaaaggcacatttgctggagcaag
ggacaacatgrgrcaagcaayagatagaccaaaaagcctaagaaggaagagmtgagaaataagatgcttg
gggaaawaagggctttgaaaagtccacatattcctgggaatctagaaggccatgcacatgtccagggctg
gacacatgctcagaaaagacctaagaaggccctaagctttcacctctggctgaccttnagactctgtaca
agcaggaagtgaaggctaaggcagagttgtaaactgccttggctgagtgttgaaggaatgccycaacaca
cagmcaatctgcaaagactaggagactttttttttgtgtttggtddtkttgttgttrttccaggtattta
aggaaayctctgtcaawyactagctgaccactaagctaaycgarcagagacttcagtggccacacatgac
aaagaatacagactttacaaaattagtttagaaaagtcactaaacaaacaayacaacagcamayaayaag
caacaacaacaaaccctggaaaggggagagaatctgatttccagagttgccacattatawtatttaaaat
gtccagttttttttttcaacarcaacaaaaattatgaggcatacaaagaaacaaagaaaagtatggccca
tacacaggaaaaagaaattaatagaaactatccctgaggaagcccagacattgracttactagacaa
>L1M3_5   L1M3/4 LINE1 repetitive element 5' end - a consensus.
agagcaagatggcagaacagaatgctcnaacaattgcccccatyctryyccnccacaggaacaccaaatt
gaacaactatctacacaaaawagcaccttcataagaaccaaaaatcanntaagcgatcacagtacctggt
tttaacttcatatnactgaaagaggcactgaagagggtaggaaagacagtcttgaatcgccaacgccgcc
cctcccccatcccccggcagtggccgcacggcacggagagagaatccgcgcacttgggngagggagagcg
cagcgattgtgggactttgcgttggaantcagtgctgccctgtcanagcggaaagcaacancgggcagaa
ctcagccggcgctcatagagggancatttagaccagccctagncagaggggaatcacccatcccagcggt
cggaacctaagttccggcaagcctcgccaccgtgggctaaagtgcnntagggtcctaaataaacttgaaa
ggcagtctaggccacaaggactgcaattcctgggcaagtcctggtgctgtgccgagctaagagtcagtgg
acttagggggcacacgacctagtgagacacyagccggggtggccaagggantgcttgcgccacccyctcc
cycaacnccaggcagcacaactcgcagctccgggagagactccttccctccgcttnaggagaggagaggg
aagagtaaagaggactttntcttgcaantcggataccagctcagccatagtaggatagggcaccgagcag
agtnnwgaggycccnattctaggccctagctcccggatgacatttctaaacacaccctgggccagaaggg
aanctgctgccttaaagggaagganccagtcctagcaggantcatcacctgctgactaaagagcccttgg
gccctgaataatcagcagcgatacccaggttagyactcgccgtaggccttgggtgagantctgagacgtg
ctggnttcaggtgtgacncagcacattcccagctgtggtggctacggggagagactccttctgcttgaga
aaaggagagggaanagtaaaggggactttgtcttgcagcttagntaccagcttggccacagtggagtaga
gcaccaagcgggctcttagggtccccgattccaggccttggctgttggatggcatttctggacctgccct
gggccagaggagagcccactgccctgaagggagagtctcaggcctggcagcattcaccgcaagctgacag
aagagtccttgggctttaagtgaacattkgcgrtagycaggcagtacttnctgtgggcctgcggcggtgg
tngccatagggagagnctcctctgcttgtngaaaggggagggaagagtgggaagaactttgtcttgtggc
ttgagtgccagctcagccgcagtagaacagagcaccgggtagatttctaaggtttccgactccaggccct
ggctcctggatagcatcyctggacgtgcccggggccagagagaactcaccaccctgaagggaaggataca
agnctggctggctttaccacctgctgattgtagagtcccggggccttgagcgaacataagcagcggccag
gcagtggttactgcgggccttgggcgagacccagtgctgtgctggcttcaggtctgaccyagtacagtcy
cagtgrtggtggccacaggggtgcttgtgtcacccctccyccagctccaggcagctcagcacagagagag
agacngagtttgtttgrgggaaagtaarggaagagaacaagagtctctgcctggtaatccagrgaattct
tccagatcttatccaagaccacnaaggcagtacctctacgagtctgcaagagccacagtattactgggct
tggggtgccccctaatgcagatacggccgcagtgacaaaaaacttagatcacaacacycaagtcccttca
aatacctggaaagcyttcccaagaaggacgggtacaaacaagcccagactgtgaagactacaataaatac
ctaactcttcaatgcccagacacagacaaacatctacaagcatcaacaccatccaggaaaacatgacctc
accaaatgaactaaataaggcaccagggaccaatcccggagaracagagatatgtgacctttcagacaga
gaattcaaaatagctgttttgaggaaactcaangaaattcaagataacacagasaaggaattcagaatyc
tatcagataaatttaacaaagagattgaaataattaaaaagaatcaagcagaaattctggagctgaaaaa
tgcaattgacatactgaagaatgcatcagagtytcttaacagcagaattgatcargcagaagaaagaatt
agtgagcttgaagacaggctatttgaaaatacgcngycagaggagacaaaagaaaaaagaaaanaatgaa
gcatgcctacaagatctagaaaatagcctcaaaagggcaaatctaagagttagtgaccttaaanaggagg
tagagagagagataggggtraaagtttattcaaagcnataataacagagaatgtcccaaacctagagaaa
gatatcaatattcaagtaaaagaagnttatagaataccaagcanatttaacncaaagaagactacctcaa
gacatttawtaatcaaactcccaaaggtcaaggataaagaaaggatcctaaaagcagcaagagaaaagaa
acaaataacatacaatggagcnccgatatagtctggcagcagacttntcggcggaaancttacaggccag
gagagagcggcatgacatatttaaagtgctgaagaaaaaaaaaaaaactttnatcctagantagcgtntc
cagngaaaatatccttcaaacatgaargagaaataaagactttcccagacaaacaaaagctgagggattt
cntcaacaccagacctgtcctacaagaaatgctanagngaattcttcaatgtgaaagaaaaggacgttaa
tgannaataanaaatyatctgnaggtrcaaaactcactgataatagtgcgcagaaaaacanaatattata
acantgtaattatggtgtataaactactcttragtagaaagactaaaagatgaaccaatcaaaaatanta
actanaacaacttttcaagacatagacagtacnntaagatanaaatagaaacaacaaaaagtttaaaaat
tggnggacgaagttaaaatgtagagtttttattagttttcttnttgttnnttgrtttttttnaanttatg
taatnagtgttattatcagtttaaaatataggatattatttgcaagcctcatggtaacctcaaatcnaaa
aacatacaacggatacacaaaaataaaaagcaagaaattaaaacatatcaccagagaaaatcaccttcac
taaaaggaagacaggaaggaaggaaagaanaaagagaagaccacaaaacaaccagaaaacaaataasaaa
atggcaggagnaagtcattacttatcaataataacattgaatgtaaatggactaaactctccaatcaaaa
gacatagagtggctgaatggatataaaaataagacccaatgatcggtcgcctanawgwaacacacttcac
ctataaagacacakatagactgaaaataaagggatgaaaaaagatatttcatgcnaatggaaaccaaaaa
agagnaggagtagctatacttayatcaganaaaatatatttcaagacgaaaactataagaagagacaaag
aaggtcactatataatgataaaggag
>L1PA15_5   Primate L1PA15_5 repetitive element - a consensus.
aagatggctgactagatgcagccaggwggaacakctcccactgagggaccaggacatcaggaagactggc
acactcctarcagatcttcagagggaaggcaytgagagtggacggagggaagacacagawgctgggctga
agggggaggaagctgggaaccctgcacggggctaccrmgcaccaggactcgttcctggcccccagtgact
cctggggaakgggtgagttgaacaggcaaggagyracccactctcaccatggacctctggaatcctagca
gsaggagaccccwcgaccmccayrgacacttgagytggcagggagagctgcttagagaagtggtaggggc
agramtccagcctgtgtggagcccagagggtttggtgcaggarcatctgtagtggagcacggccagggay
gcccatcccccaaggctcamcatgctcccataggagactttagcccttagggkaactgtyrgacctgaac
wctgcagggtrgtcttgcccatgagacrgggccagtctgacctgagcaccccttggtctgctggcctctc
cyggggccccagcctggccacacctgcttgcagtgcagcctccaggtgcctcctgggggcccacatcata
gcttctgcactggcagaccatgcctgaccagcagagagctccagcagggcggcccccatggmcacgcacc
agcctgcatgctccctccccacactgcagcttccccatggygctttgcctgcacacattnrcccatggca
actccccacatcactttgctggcacgtgtctgcatrggtggrttttgctttccttgccctgccagygtac
atgtgygagtgcaccctgctgtgccactgctgctggygggagtgcaccccccacccattctcccatacct
sctgactgccattgcagatggagccttggtgggcacagagccagccagccccacccccaccagyrcccyr
cccytgyrctaacactgcccctggagtgaaaccaggcacaagaacagcggatyctccccyaccctgagcg
accactcctgcttgtggggcacagagaaggcacacagacctcacmcagwyctgwgccgaccagcgcttcg
ccccgtgctaacaccaccwccggtgcaancgcawgcacagwcgccggcgrcggcccctcgccgctctgag
ccgttctgccwctgctgccgctgtgaatgcscacagggaggcaggcacccccgcacccgctagtaccccc
nacccccacctaaggcgttgagcgygcaccctgccgtgccgccgctgctgctggcacacgcaagcaagca
tagatcctgctgccaccgccccaaaaaagcactttggctggcaccacccatcggagtgttgtggccagtg
gaccgggaacacctcggncccyccagcgcagcaggttcctaacctcgaggggccagagaacaaagctggg
gacccgrtaccagccccccagagttagagcacacagcccaggagtgctgagctgagccttggncccctaa
aatcttccagaaacgaanccagtcaactgaacccaccttataccacaatcaaacccccaagggcatcaaa
gaagatraaagaaaaaaaaaycatccaaaggacagcaacttcaaagattgaaggaacatcagcccacama
gatgagaaagaaccagtgcaagaactctgrcaactcaaaaagccagartgycttctttcctscaaatgac
tgcaytasttcyycagcaakggttcktaactaggctgaaatggctgaaatgncagaaatggaattcagaa
tatggataggaatgaagatcatcaagattcaggagaamgtcgaaacccaatccaaggaakctaaggaatc
acaataaaacgatayaggagctgamagacaaaatggccaktwtaraaaagaaccwaactgatytgataga
gctgaaaaacwcgctacgagaatttcataata
>L1MD_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggcaaaagac
ataaacctacagatagattcaagaagctgagtgaaccccaaacaggataaacccaaagaaatccacacca
agacacatcatagtcaaacttctgaaaactaaagacaaagaaaaaaaaatcatcttgaaagcagcgagag
agaaatgacaccttacctataggggaaaaacaattcaaatgacagtggatttctcatcagaaaccatgga
ggccagaaggaagtggcacaacaattttttcaagtgctgaaagaaaagaactgtcaacccagaattctat
atccagyaaaaatatccttcaggaatgaaggggaaatcaagacattctcagatgaagaaaaactaagaga
atttgttaccagcagacctaccctaaaagaatggctaaaggaagttctctaaacagaaaggaaatgataa
aagaaggaatcttggaacatcaggaaggaagaaagaacatagtaagaagcaaaaatatgggtaaatacaa
tagactttccttctcctcttgagttttctaaattatgtttgatggttgaagcaaaaattataacactgtc
tgatgtggttctngcnaaaaatgtatgtagaggaaatatttaagacaattatattataaattgggggagg
gtaaagggacataaagggaggtaaggtttctacacttcacttgaactggtaaaatgataacaccagtaga
ctgtgataagttatgtatatataatgtaatacctagagcaaccactaaaaaagctatacaaagagatata
ctcaaaaacactatagataaatcaaaatggaattctaaaaaaaatgttcaagtaacccacaggaaggcag
gaaaaagaaaacagagaaatgaaaaacagaacaaacagaaaacaaaaaataaaatggcagacttaagccc
taacatatcaataattacattaaatgtaaatggtctaaatacaccaattaaaagacagagagattggcag
agtggattaaaaaacatgacccaactatatgctgtctacaagaaactcacttcaaatataataatatagg
caggttgaaagtaaaaggatggaaaaagatatatcatgcaaacattaatcaaaagaaagcaggagtggct
atattaatatcagataaagtagactcttcagagcaaagaaaattaccagagacagagagggacattacat
aatgataaaagggtcaatccacaaagaagacatagcaaatcctaaatgtgtatgcaccaaacaacagagc
tgcaaanatatgtgaagcaaaaactgatagaactgaaaggagaaatagacaaatccacaattatagttgg
ggacttcaacanccctctctcaacaattgatagaacaactagacagaaaatcagcaaggatatagaagaa
ctcaacaataccatcaaccaataggatctaattaacatttatagaacattccacccaamaacagcagaat
acacattcttttcaagtayccanggaacatataccaagatagaccatatcctgggycataaaacaaacct
caacaaatttaaaagaattgaaatcatacagagtgtgttctctraccacaatggaatcaaactagaaatc
aataacagaaagataacaggaaaatctccaaacacttggaaactaaacaacatacttctaataatccatg
ggtcaaaaaagaagtctcaaaggaaatnaa
>L1ME1B_5   Partial L1ME LINE1 repetitive element 5' end - a consensus.
cagacttccgcttccggtaatggtggagtaagctcctaccggaccaaccctcccgcagataacaactata
aactctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaccaaaagcaggcagaaactg
gaggggagtcgacacctggaagaagggaatwgcacggagtgagttcccatttctacggctttttgcctga
gagcaggccgcagttggtgcgtcgtacagatggctaaaacwtcagtagaaaacccgcggtcttactggct
tgaagaaccagagaanagaattcggggcaaccacagccactggaaagtgaggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactccaagcagcccagctaaagacaaaagaactgaactgagattggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagytaactgcctactaaaacaaaagaaacaacac
tctttagagaaaaataacagaatccagagtctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmagataagaagaaacagraaaaatgtaatncatccttaagagaaaagaaaataaaaaccg
accctgagatraaccagatgttggaattaacagacaaggactttaaagcarctattataaatatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtcagtgaacttaaagatagatcaatagaagttatacaa
tctgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgtgcgacaatatca
aaaggtcnaacatanatgtaattggaatcmcagaaggag
>MER86   Repetitive sequence.
gacttccgtttctagtaatatggtagactagatatcctgaaaacccttccgctacaaaacacctagaaat
gctggataaaatataacaaacatccttttaaatgcatagctgagctcgcaagaaagtaagggaaatcccc
aggggccaaaaatgaagagagaactgaaaaccagagcggtgagtamgtgagctgacgctgtggctg
>L1M5_5   L1M5 LINE1 repetitive element 5' end - a consensus.
aaagagtttcacttctagaatggcagtgtgaggagctccatagacccactccccagtgaaacaaccataa
ctggtgaaaattatttttaaaaanncaaccatttaaagtctctggaaattgtcctaagggcatacagcaa
atgaaacatttattcaagaaaatctactaaatcttagtaagaacagtgagagtctgtggtatttgagcca
tgactgtctcccttcttcccccccccnasccagctcagcawgatagaaactccactccaggtkggtgcag
ccaagaacacagggctccctctcccctcagctcccagtcaagggctatggtatctncctaggaggagcag
gacatcagcatttctcatcccccccagctccatgttgcagaggctaaattccaggtgagtgtagctgaga
ggtcgggggctcccttcctccacccagcccccactcataggatggacttggctctaccngccaggtatgg
caggctgagaatactggggccctaattacccttaccccagctcgctcatagggnagaggttccatgccag
gagaggcaagccaagaagaccagaggctactrncccnncccagcacccagagcagtggctcagagatttt
gcccagggggagaggcaggccataagaacagagagctccaaagctctccccaaaggaactgactttattt
gcaacagagtgtgaggaagttcaagcctaagggcactctcaaaaacaatggagattttggtggtaagcaa
ttaagggaggctggtagctcnannanagyaacaagctaaaccataggccagctagtttaccagagagaac
cagggaaagagacagctaagaagagccctcctggggtcagaacaaacctcaaacactgacctcaaaaaac
tacccctgcctraatttaattggatcagactgtggagcaatttatgccccagggattgttgaaaaacaat
agagcaatcagccagcaattagtggagcctaacagctgggtgtgantacmnamngaggcagacagcttaa
cagagagatcagagaaagagacagtcaaagagagccctgctaaaaccactgtcatcccagggtgactgtg
cacatgcccaaggctgtgccctctgaggagcaacatcagaggctt
>L1M6_5   Subfamily of LINE1 repetitive element 5' end - a consensus.
gacatcagcaagatggcggaataggactttccagcgctcgtcctcacagaaacatcaatttgaacaacta
tccacgcacgaaaataccttcacaagagctaaggaaaccaggtgagagattacagyacctgggtgtagca
cagaaataagaaaagacgcattgaagagggtaggaaggacagttttacattacccgcgtcacccctcccc
caancccaggcagcacagcatggagagagataccctctgcttgggggaaggagagggaagtgagcacagg
actttgccttggaccccaaacactaggcccgccccagtaaaacccagtactaggcaggcccccatagccc
cagactccaggccagtacctacggactgagccgyaccagatcccacagcccaggctccaggcctgcctgg
tggactcagtctccaggcctgccccagcaccaggccaaccccagtgccccaggctccagaccggccccag
caccaggccagccccagtagccccaggctccaggctgsccccagcaccaggctggcccccatagccccag
gcttcaggcccaccccagcaccaggctggcccctrcagccctagtcatcaggccagcacctatagaccca
gcctccaggctggcccctgtagacacaggctccaggcctacccagcrccaggccagcccctgtagcccca
ggctccaggcccaccccaggytccagaccagcccagagccaggtyggcccacatagccccaggcttcagg
cctgccccagyaccaggtcagcacccctggcctcagaccttagccaggtaccaggctggcacctgtagac
acaggctccaggcctgcccagtaccaggccagtccctgtggccccaccctccagggcyagcccctgtggc
cccatgctccagcagacccagggttcaggcctgtcccagtagaccccagcactaggctagtccccataga
cccaggctccaggactgtccctgtgtacccaggtcccagggcagcccctatggccccaggacccaggcca
gccctcagagacctagcctctaggccagccctgcagacccagcctccaggctggcacccayagacccaag
ctccaggccatcccccaggttccaggccagcctcagtagctccaggcaccaggctagcacccacagaccc
aggctccagactagccccacgctaccccagcaccaggccagccccaggctccaggctggtccctgtggcc
caggctccagtggacccagggtccaggcctgctccagcagacccagggtccaggcccaccccagtagacc
ctggttccaggctagcccccatggactcaggctccaggaccacccctgcagacccaggctccaggccagc
cccyatggaccaggatccarggcccatytccccagttgcaggctccaggcctgccccagtgccaggccag
cccccatggactcaggctccaggcccatcccagtggacccaggctccaggcccatcccagyaccaggcca
gcccctgyagactcaggctcaaggcccaccccagcaccaggtcagcccctgtggacccaggcttcaggcc
agcccctatagacacaggctccaggccyaccctcatggacccaggctccaggcccayccccacagaccca
atcaacaggtccacccagtggatccaggctccaggcycaaccctgtggacccaggcaccaggcctgccac
ctgctgacccaggcaccaggccagcctgcctaaggactccagcagcaagcctgcctatagaccataccag
atggcctgcccagaatctctggatgactggtgaagggctttcccagacaaagccagtctgcaaagactgg
aataagtccctacttcttcaaatgtgcagacaccaatgcaaggcccaagaatcawgaacaatcagggaaa
catgacaccaccaaaggaacaaaataaatttccagtaactgaccctaaagaaatggagatctatgaactg
cctgacaaagaattcaaaataattgttttaaggaagctcagtgaactwcaagaaaacacagatagacaat
taaatgaaatcag
>L1P2_5   5' part of L1 subfamily - a consensus sequence.
ataaaaaaattaatgagaagaggattctgggaagatggcagagtaggaagcaccaggaatctgtctcccc
acctagacaacaattgcactggcagaatctgtctgatgtaactattttggaactctggagtctattgaag
gcttgcaacttccaggggaaggcttggatggtaaattgtggttaatttcggtcaatttcagctcttagca
cagtagcagctacccatcccccacccccagccccgtggcaggcagctgtgcacgtgttcctggagcagct
tgcacacagcttgcgggagccagggtgggcaaaaaggatcctgtcctccaaatatcggggatctgtgctc
tgatcgctgattgctgcttctgatcacagaggtgcagacaaagaggtggcggccattgttgtcgcacctc
ccyccattgttgcaagcccctccccctctggctgaagtgacttccaggggatttaaagggctagtaccct
ttctccgctttatttttcttttttccccttttgggagccagacattaaagactaggacattcaaaagcaa
ctgcatatacggggaaaattagaaagtcaccgtgcatgcccagggaaaggcacaggctcagaaaagacct
gagaagaccttaagtttacacctcaggctgatccttggcacagagacagcctacaacaataaaaacaaaa
caaaaaaataacaaaaacacagcaaaccctggggaagagggagaatctgatttccagagttaccacatta
ttagattcaaatgtccagttttcaacaacaacaacaaaaaatcacaaggcatacaaagaaacaggaaagt
atggcccattcaaaggaaaaaaaataaatcaacagaaactgtccctgaaaaagacctgatggcagatcta
ctagacaaagactttaaaacaactgtcttaaagatgctcaaagaactaaaggaaaacgtggagaaagtca
agaaaatgat
>L1M7_5   Subfamily of LINE1 repetitive element 5' part - a consensus.
tgcaaggtgaaatgaaaggacactagacagtaacttgaagccgtatgaagaaataaagatctcagtaaag
gtaaatacatgggcaattataaaagctagtattattgtaacwatggtttgtaactccactttttgttttc
tacatgatttaaragactaatacattttttaaaaattattagtctaaaagctagtattattgtaattttg
gtttgtaactccattttgttttctacataatttaaaagactaatacattaaaaataattattaatttatg
tttttgggcacacaatgtataaagatgtaattttgtgacatcaataactgaaaggggtggggayagagct
gtaaaggcagagtttttgtatgttattgaagttaagttggtataaattcaaattagattgttataacttt
aggatgttaaatgtaatccccatggtaaccacaaagaaaatagctatagaatatacacaaaaggaaatga
gaagggaattaaaatatttcactacaaaaaaaatcaactaaacacaaaagaagacagtaatggaggaaat
gagggacaaaaaagctataaggcatat
>L1M3E_5   L1M3/4 LINE1 repetitive element 5' end - a consensus.
gagtgatgtnaccaaaggtagaatagaagcaagctggcttcactccccccacccacagaaaaccaaaaac
aaatatacagcaccaagattatcaccagcaatatcccagaactcaaatatgaggatgagacagttcctga
ggccacagagaagtaaaaaactctgagcagayagtaagagaattagacttcnatatcnacratgcccctc
ccccaatctgcccagcaccacatanaaaanttctcccagactcanagtttctacaytggaaaaagtgaga
ttraggtggacaaccagcttccccaccatcttgggttccttggcaggagacctgtccctgcctcaaccca
trggaagcatcaygagtgcctgaagggagaaatatycctgaggacagccagagacaaagggaggaggtag
gactaccatccccagccctggaaactcggggggctgctctgtaacttggmcaaaggagacaccaaatcag
agtggctgttcagcagcaccatgctgtaggaggttcnttccacaggtcccctggrcatgaacccctagcc
agccttcccacactgccaggatatcccctttgggacctcccccaatccgggatgggnagcactctgagag
ccaaggcaaacctrggcttaaggtgccatctagtgcygaaaggaggcagngacctagygaaaagaaattc
aacaggtaaattacaaagaatctctaagcaaacaaaacaaaccagmcaga
>L1PAXX_5   Primate L1PXX subfamily 5' end - a consensus.
ggggtggggccaagatggctgactagaagcagcwgcgatcggaggctcccatggaaaagaaccaaaacag
tgtgtaaatcctgcaccagcaactgaggtatccaggttctctcatcaggactgactaggcagctggcatg
acccatggagaggaaggaagagcagtgtggtgtggcggcccacctgagagccacacggggcaggggagcc
cccaccccccagccaagggaggcagtgagtgagcatgctacccagcctgggaaaccgtgctttttccacg
gaactgtgcaacccatggatcrgaagatcccactcrtgaacccacrccaccagggcctagsgtcccaacc
ccggagctgtgcagattctcaacagcctctcagctggaatctgcttaagcctaccgagctcccgggggga
ggggcgaccagcaccacagctgcagctgcctgctgtctaagccatttgagctccttgggggaggggcagc
agccagcactgggactcacaactgcctaacacnctaagctccctgggcaggggaagggcagcatccatct
ctatagctccaggctgtgcttttcccctgctggagccagggaggctggatggcttggtcccaagacntgt
ccccacagcccaacacacyggctgtggcagactgcrgccagagtgcctcttcaggcctgactgaccctga
cccatccttcctncctcactgggtggggcytccctgcaggaactccaataactccagccagaggctcagg
gacagaactctgatctccctgggcctgagcccctagggggaggggtggccacagtctctgyggaccagca
gacttagcctttcctcctggtagttctgaggaatccaggcagcccagatgagtgggtttccccccgaagc
gaagcacaccccctccaccaagggacagtcaaagtgcttcattaaatgggtcctgttccccatgccaccc
aactgggtgagaccctccaacaggggttgtcagacaccctatacaggagcaatcctactggcatcaggtt
ggtgcccctcgaggtcagagatcccagaagaaggagcaggcacccatctttgctgttctccagcctcctt
gagtgacatctccaggcaygggagcgaaycagatgaatagggcctgaagtgaacccccagcaaactgcag
cagccctacagaagagggacctgaccattgaaagaaaaacaaacaaacagaaagcaacaacaacagcatc
aacaacaacaacaaaaaagcccccacaaaaaccccatccaagggtcagcagcctcaaagaycgaaactag
acaaactcatgaagatgagaaagaatcaatgaaaaaatgctgaaaacccaaaaggccagagtgcctcttc
tcctccaaatgattgcaacatctctccatcaagggcacagaactggacggaggatsagatggacgaattg
acagaagtaggcttcagaaggtgggtaataahaaactctgctgagctaaaggagcatgttctaacccaat
gcaaagaagctaagaaccttgataaaaggttagaggagctgctaactagaataaccagtttagagaggaa
cataaatgacct
>L1MDE_5   Expanded 5' end of L1MD/L1ME subfamilies - a consensus.
gaagtactctccttccccaccaggcctgagactcctcccctaccaagagataccaaggtgaccaggtggc
accagcaagagggatcctgccacaacaagcagcctggnnnancctggaagcactctctttccccatgggc
ctgagactcccctcccctacccagagacaccaggtatgcyaggcagcactagcaagggggatcctgccac
aacaagcacctagcccaggaagcctctttatccccatgggcctgggagactcccttccncacccacatcc
cctcccctnnccccacctagagacaccaggcagcctggcctggggaagctccttctgccccctcaggcag
caccagcagggaccagtgggagccccagtagcaccagataaaccaagcagaccaaaatagcactgcaaag
gctctgaaaattaaactgtcattggaaccacagcccacaaaaggtaggccaggacctacatgctaaacct
aaacagggtgact
>L1PA2   3'-end of L1 repeat (subfamily L1PA2) - a consensus.
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaatg
ctcatcatcactggccatcagagaaatgcaaatcaaaaccactatgagatatcatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttac
actgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctaga
actagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcactattcacaatagcaaagacttggaaccaaccca
aatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaatgatgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctcagtaaacta
tcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatg
gacacaggaaggggaatatcacactctggggactgtggtggggtggggggaggggggagggatagcattg
ggagatatacctaatgctagatgacgagttagtgggtgcagcgcaccagcatggcacatgtatacatatg
taactaacctgcacaatgtgcacatgtaccctaaaacttaaagtataataaaa
>L1PA7   3'-end of L1 repeat (subfamily L1PA7) - a consensus.
ctaatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcaaaggatatgaacagacacttctcaaaagaagacatttatgyagccaacaaacayatgaaaaaaag
ctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccatctcaygccagttaga
atggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttac
actgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctrc
tataaagacacatgcacacgtatgtttattgcagcactattcacaatagcaaagacttggaaccaaccca
aatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaaggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaacta
acacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgaacaatgagaacacatg
gacacagggaggggaacatcacacaccggggcctgtcggggggtggggggctaggggagggatagcatta
ggagaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcacatgtatacctatgt
aacaaacctgcacgttctgcacatgtatcccagaacttaaagtataataata
>L1PA11   3'-end of L1 repeat (subfamily L1PA11) - a consensus.
ctaatatccagaatstacaargaacttaaacaaatttacaagaaaaaaacaaamaaccccatcaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatwtatgtggccaataagcacatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcayrccagtcaga
atggcaattattaaaaagtcaagaaacaacagatgctggygaggctgtggagaaataggaatgcttttac
actgttggtgggaatgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgrgtatatacccaaaggaatataaatcattctat
tataaagacacatgcaygtgtatgttyattgcagcactattcacaatagcaaagacatggaatcaaccya
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaagaatgagatcatgtcctttgcaggaacatggatggagctggaggccattatccttagcaaacta
aygcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaacgatgagaacacatg
gacacatggaggggaacaacacacactggggcctgtcggagggtggagggtgggaggagggagagcatca
ggaaaaatagctaatggatactgggcttaatacctgggtgatgggatgatctgtgcagcaaaccaccatg
gcacacgtttacctatgtaacaaacctgcacatcctgcacatgtaccccggaacttaaaataaaagttga
aa
>L1PA15   3'-end of L1 repeat (subfamily L1PA15) - a consensus.
ctaatatccagaatstacaargaacttaaacaaatttacaagaaaaaaacaaamaaccccatcaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatwtatgtggccaataagcacatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcayrccagtcaga
atggcaattattaaaaagtcaagaaacaacagatgctggygaggctgtggagaaataggaatgcttttac
actgttggtgggaatgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgrgtatatacccaaaggaatataaatcattctat
tataaagacacatgcaygtgtatgttyattgcagcactattcacaatagcaaagacatggaatcaaccya
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaagaatgagatcatgtcctttgcaggaacatggatggagctggaggccattatccttagcaaacta
aygcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaayattgagtacacatg
gacataaagaagggaacaacagacactggggcctacttgagggtggagggtgggaagagggagaggatca
aaaaactacctatcgggtactatgcttattacctgggtgatgaaataatctgtacaccaaaccccagcga
cacgcaatttacctatataacaaacctgcacatgtaccccctgaatctaaaataaaagttaaaa
>L1PB1   3'-end of L1 repeat (subfamily L1PB1) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgaggatgcaaa
ggcgtaagaatgatacaatggactttggggactcgggagatcgggrgaaagggtgggaggggggtgaggg
ataaaagactacaaattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcacaaatcac
cactaaagaacttattcatgtaaccaaacaccacctgttccccaaaaacctattgaaataaa
>L1PB3   3'-end of L1 repeat (subfamily L1PB3) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgggtatatacg
ggcatatagagtggtataatagacaytggagactcaaaaggtggagggtaggagaggggtgagggatgaa
aaattacctattgggtacaatgtwcactattcgggtgatgggtacactaaaagcccagacttcaccacta
yacaatatatccatgtaacaaaaakgcacytgtaccccctaaatytataaaaataaa
>L1MA2   3'-end of L1 repeat (subfamily L1MA2) - a consensus.
ytaatatccagaatmtataaggaactcaaacaaatcaacaagaaaaaaacaaataatccmattaaaaart
gggcaaaagacatgaayagacatttctcaaaagaagacatacaaatggccaacargyatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaacyacaatgagatatcatctcaccccagttara
atggcttttattaaaaagacaaaaaataacaratgctggygaggatgtggagaaaagggaactcttayay
actgttggtgggaatgtaaattagtacarccaytatggaaaacagtttggagrttyctcaaaaaactaaa
aatagarctaccatatratccagcaatcccactrctgggtatatayccaaaagaaaggaaatcagtatat
yaaaragatacctgcactcccatgtttattgcagcactattcacaatagchaagatttggaatcaaccta
agtgtccatcaacrgatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgaratcytgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agycargmacaraaagacaaacaytgcatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtnggaggattggggggng
gkgrrgagggatggttaatgggtacaaaaaaatagttagaaagaatgaataagacctagtatttgatagc
acaacaaggtgactatagtcaataataatttaattgtacattttaaaataactaaaagagtataattgga
ttgtttgtaacacaaaggataaatgcttgaggggatggataccccattttccatgatgtgattattacac
attgcgtgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaat
taaaa
>L1MA5   3'-end of L1 repeat (subfamily L1MA5) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaataccgcatgttctcactcatatgtggaagctaaaaaagttgatctcata
gaagtagagagtagaatagtggttactagaggctgggaagggtagggrgaggggggratagggagaggtt
ggttaawggrtacaaaattacagttagataggaggaataagttctagtgttctgtagcaccgtagggtga
ctatagttaacaayaatttattgtatattttcaaatagctagaagagaggattttgaatgttcccaacac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacawtgtatac
atgtatcgaaatatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaa
>L1MA9   3'-end of L1 repeat (subfamily L1MA9) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgatctcacttatatgtggaatctaaaaaagtcaaaytcata
gaaacagagagtagaatggtggttaccaggggctggggrakgggggaaatgggaagatgttggtcaaagg
gtacaaagttkcagttatgtargatgaataagttctrgagayctaatgtacagcatggtgactatagtta
ataatactgtattgtatacttgaaatttgctaagagagtagatyttaagtgttctcaccacanacaaatg
gtaactatgtgaggtgatggatatgttaattagcttgaytgtggtaatcatttcacaatgtatacatata
tcaaaacatcacgttgtacaccttaaatatatacaatttttatttgtcaattatacctcaataaagctgr
aaa
>L1MA10   3'-end of L1 repeat (subfamily L1MA10) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctgggggragggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
ataatactggattgtacacttaaaawttgttaaaagrgtagatctcatgttaagtgttcttatcgcacaa
caaaaaaatggggaacttttggrrgtgatggatatgttcattatcttgattgtggtgatggtwtcacggg
tgtntacatatgtcaaaactcatcaaattgtacacwttaaatatatgcagtttttagtgtataattatac
ctcaacaaagctgttttaa
>L1MB3   3'-end of L1 repeat (subfamily L1MB3) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaacgccactgaactgtacgcttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaaaaaaa
>L1MB7   3'-end of L1 repeat (subfamily L1MB7) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctataattaaaaagacagacaataacaagtrttggcgaggatgtggagaaattrgaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactttggaaaayagtttggcagttcctcaaaaagttaaa
catagaattaccatatgacccagcaattcyactcctaggtatatacccaagagaawtgaaaacatatgtc
cacacaaaaacttgtacacgaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatccatacaatggaatattattcagccat
aaaaaggaatgaagtactgatacatgctacaacatggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggycacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctgggggraaggggaaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctaaaattagatagtggtgatggttgcacaactytgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaarctataa
>L1MC2   3'-end of L1 repeat (subfamily L1MC2) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatccaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catactcttaccatatgatccagcaatcayactccttggtatttacccaaatgaattgaaaacttatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaagaaatgaactatcgagacatgaaaagacatggaggaaccttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaactatatgacattctgaaaaaggnaaaactatgg
agacaagtaaaaagatcagwgattnctagagkgastrggarrgggagggaagaataggtggagcncaggg
gatttttagggcagcgaaactattctgtatgatactataatggtggatacatgacattatacatttgtca
aaayccatagaactgtacaayacaaagagtgaaccctaatgtaaactatggactttagttaataataatg
tatcaatgttggttcatcaattgtaacaaatgtaccacattaatgcaagatgttaataatagggtaaact
rttgtgtgggggagggagtatatgggaactctctgtactttctgctcaatttttctgtaaacctaaaact
gytctaaaaaataaagtctattaataa
>L1MC3   3'-end of L1 repeat (subfamily L1MC3) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgawacyactatatacgt
atannaraattaaacaaataagtaaatgtatkgtagatgatgggagccaggtttctcactgtcggagtga
ggagttacagataagcaaagggaggagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccgctgagagggccta
gaagcaacgacaccccagtagcaatgagcacacctagcacccagatcttggtttctaataccattctcca
ataaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatatacaagatgag
cctggaacatcttgcartgccagaaaataaggaagtgctcaaaaacacaatgatrggggtatgtcaaagg
gacacagragccaactgaaagagctcccaatggccaaagctggaacaatttgagcaacaaaataaattat
rgtagtattggattataacycaaagtataaaataaatatccatgagtccatactgatataaatgaatgat
taaataaataaataaattgagaagataaataagtctctnntgcagaagaatttcaaataatttatgtaga
tarcctnccctcaaggaagtggagcgtaactccccactccttaagtgtgggatggatatagtgacttcct
tccagaaagcatagtataggacggaaaaaaaagtaaatttacwgtagagaaacctgacaaacactacctt
agccaggtaatcaaagttagcatcaacaattgtaagtcatgttgatagyatatacccttgatatgatgtg
ataagaatggcacttcacctccgtggtcttcctcccaaaaacccataaccccagtctaatcatragaaaa
atatcagacaaattccaactgagggacattctacaaaatacctgaccagtactcctcaaaactgtcaagg
tcatcaaaaacaaggaaagtctgagaaactgtcacagccaagaggagcctaaggagacatgacaactaaa
tgtaatgtggtatcctggatgggatcctggaacagaaaaaggacattaggtaaaaactaaggaaatctga
ataaagtatggactttagttaataataatgtatcaatattggtttattagttgtgacaaatgtaccatan
taatgtaagatgttaayaataggggaaactggatgtggggtatatgggaactctctgtactatttttgca
actttcctgtaaatctaaaactatttcaaaataaaat
>L1MC4   3'-end of L1 repeat (subfamily L1MC4) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgaaactattttatatgt
attgtaggattgagcaaataagtaaacgcattgaagataatgggagccaggtttctcactgtcggagaag
ggagttacaaatatggaatgggggaagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccactgagagggccta
gaagcaatgacaccccagtagcaatgagcacacctagcgcccagatcttggtttctaaataccattctcc
actaaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatgtacaagatga
gcctggaacatcttgctrtgccagaaaataaggaagtgctcaaaaaatgatrggggtatgtcaaaaggac
acagragccagcttgaaggggctcccactggccaaatctgggacaatttgagcatcaaaataaataacgg
tagtaatggattataactcattgaataaaataaatatccatgagttcatactaatataaataaatgaata
aaagaaataaataaataagaragaaaggaaagytcttcttacagtagaatgccaactaayaaatgtagaa
ggaataaaataatagaaaaatcaccatttggcaaayaccacagtaataantgtttcaggcaagaaccatc
gatagatgctaaaattagtgggcgaaartttgatgagaaacgggatatttgcatagtctcaaagtatctc
yccacaagatatttattaattayaaagggaaaaatagtractttacagtagagaaacctggcagacacca
ccttaaccaagtgatcaaagttancatcaccaataatgagacaaattgacatcatgcgcytcctgatgtg
atgcgccgagaaggacacaacatcacttctgtgatattcytgccaaaaatgcataacctgaatctaatca
tragaaaatatcagacaaacccaaattgagggacattctacaaaataactggcctgtactcttcaaaaat
gtcaaggtcatgaaagacaaggaaagactgaggaactgttycagattgacggaagactagagacatgaca
actaaatgcaacgcgtgatcctggattggatcctggatcgagaaacggtgggagtttktayctataaagg
acattattgggacaattggcgaaatttgaataaggtctgtagattagataatagtattgtatcaatgtta
atttcctgattttgataattgtactgtggttatgtaagagaatgtccttgtttttaggaaatacacactg
aagtatttaggggtaaarggncatsatgtctgcaacttactctcaaatggttcagraaaaaaaatnnata
tayataaryagagaatgataaagcaaatgcggcaaaatgttaacaattggtgaatctgggtgaagggtat
acgggwgttctttgtactattcttgcaacttttctgtaagtttgaaattatttcaaaataaaaa
>L1MD1   3'-end of L1 repeat (subfamily L1MD1) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatactttggcagtttcttataaagctaaa
catacamttaccatatgactcagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccataccatggaatactactcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctccagaaaattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttacataacattcttgaaatgacaaaattwtag
arwtgragarcagattcctggttgccaggggttagggacgggggtgggggtggagggaggtgggcatsst
ggagttccctgtggtgatggaaatgttctgtatcttcactgtatcaatgtcaatatcctggttgtgatay
tgtactatagttttgtaagatgttaccattgggggaagctggatgaagggtacacgggatccctctgtat
tatttcttacaattgtntgtgagtgtgtaattatttcaaaataaaaagtttaatttaaaaa
>L1MD2   3'-end of L1 repeat (subfamily L1MD2) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatagtttggcagtttcttataaagttaaa
catacamttaccatatgacccagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccatacmatggaatactattcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctcaagaacattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttatatarcattcttgaaacgacaaaactatag
agatggagaacagattagtgrttgccaggkgttagggatrcaggraggaggtggatgtgrytataaarrg
gtagcatgagrgaatytttatggtgatggaacwgttctgtatcttgaytgtggtgrtggttacacgaatn
tatacatgtgataaaattgcatagaactaaatayryryryrataagtacaagtaaaactggcgaaatctg
aataagatwnatggrttgtaycaatgtcaatwtcctggttktgatattgtaytatagttttccaagatgt
taccattgggggaagctaggtgaagaacacacgggatcccyctgtattatttcttacaattgtntgtgag
tktayaattatttcaaaataaaaagtttaatttaaaaa
>L1ME2   3'-end of L1 repeat (subfamily L1ME2) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctcaaaaagttaaa
cacgcacctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacttgtacaagaatgttcatagcagctttattcataatagccmmaaagtggaaacaaccca
aatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatattactcagcaat
aaaaaggaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgtatgattccatttatatraaattcwagaacaggcaaaactaatc
tataatgntagaaatcagaatagtggttgcctctggkgagggtraatgactggraagggrcatgagggaa
ttttctggggtgatggaaatgttctatatcttgatcggggtggtggttacacgagtgtatacatttgtca
aaactcatcgaactgtacacttaaaatctgtgcattttactgtatgtaaattatayctcaattttaaaaa
a
>L1ME3A   3'-end of L1 repeat (subfamily L1ME3a) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctacaaaagctaaa
cacgcgcctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacatgtacaagaatgttcatagcagcattgttcataatagccaaaaagtggaaacaaccca
gatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatactactcagcaat
aaaaatgaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgnntgattctatttgcataaaatacaaaaccaggcaaaactaatc
aatgntgttagaagtcaggatagtggttgttctgggaatagtaatgactgtaaggrarcatgagagggct
ttctggggtgctggtaatgttctgtttcttgatctgggtgctggttacacggctgtgttcartttgtgaa
aattcatyaagctgtacacttatgatwtatgcayttttatgtatgtatattatayytcaataaaaaaaa
>L1M2_5   Primate L1M2_5 LINE1 repetitive element - a consensus.
caaagaaatgtatktatgcaggagggcttcaagatggctgactagaggcakccggtactcgcctcctcca
caaagaagaaccaaaatagcgagtagataatcacacttcgaatagakcatctaagagagaacactggaat
tcaacagagaagcgacaggaaacacctaaagcaaggaaggagaaggaagcgaggcagcctgctcggccgg
gattggctgggagccaggagaggctccccaatgcggggaaagggtaagtgagagacccccagcggtccac
attcccaccacggactcctgcaatcctagccacgagagagcccctcaaccctcgcgggccctgagactaa
catagggagctgcctggagwccgcgcganggcattgctccagagagggagctcacgctgggtcccacama
cccccaagwcctaagcagctgcagcacggcgccattttgagagcccagccmccaccagactgcatcctgc
cctggggcccaacagcccctgcatctccacattcctggagccccastgacatnccccacccatggctgca
gctgctggggcaraggcaggaaccactggcagcaancccwcccctgcccagcagaggggtggccatacaa
tttcatryacaccaaggacaaattcccctgmctgcaaatgctaccactgngagctgctgtggagctgagg
yacgagcaatgcacncgctacccaggcgcctgcctatggctgctnccacwgaaagcaaccccaccctccc
cagcagcagggccacagtgcagccactgctgccctccacctgagcattccaccaggggcctggggatcac
cctgcccctgcctaccacagccggcgcctgcacacaccaccggggggcctgaggacaggcctgcccggcc
cagctctgccacacccmccagtgcccaagcacgccatctaggggcctggggatcgcccaacccagtccac
caccgctggcacctgagcactcctcctgggggcctgaggacgggcctactcagcctgccactaccaccac
agctggcacccacccacatgcgccacctgsrggcctggggactggcccgcccagcccgtcgcagccactg
ccaacaccaacacgcactgcttgggacccagagggttgtcccaccactgctactgccatcgcccatgcca
tgcyngctgcccaggggctcaagaacctgtccacccacccggcccaccgctgccactactggcacccaag
caagccacctggaggcccaagaatcggcctgcctggacccgctaacaccagtgccaatatatgccaccct
ggggcccaaggacaggcacactcagcccactantgccaccactggggcctgaagactggcccacctggca
tcccagtccccagcaaaacttcaccacagcctccactaacaaccacaccctaagccactgaggaaatcac
agacaccactgatgctgtttacagccaaagaaatcatacggagactacactactgcacgcacccagaatc
aaagccaaagcgccctacccaaccaacaccatagatacatctwcaggaaaaagtccttccctacgaaagc
tamtccataaaattggaagaagcgactgttacaccagatgtgcagatatcaacgtaaggacacaagaaac
atgaaaaagcaaggaaacatgacacctccaaaggaacacaataattctccagtaayagactccaawnaaa
aagaaatctatgaaatcccmgawaaakaattcaaaatgatgatattaaagaagctcagtgagatacaaga
gaacwcagawaaacaatacaaggaaatcaggaaaacaattcakgatatgaatgagaaatttaccaaagag
atagatatcataaaaaagaaccaaacagaaatcctggaactgaagaattcawtgaatgaaatamaaaata
catttgaaagcttcaanaatagactagatcaagcagaagaaagaatctcagaacttgaagacaggtcttt
tgaaataacccagtcagannnwaaaaaawaanaataaaaaagaatgaasaaagcctatgtgacatatggg
acacmattaagcgaacaaatatttaaattwtgggwgttccagaagaagaagagntgggnaaaggcnyaga
aaacctatttaataaaataatagctgaaaacttcccaggtttagcaagagattnagacatccagatacag
gaggctcanagatccccaaatagatncaacgcnaaaagggcctctccamggcacattatagtcaaactgt
caaaagtcaaagacaaagaganaattctaaaaacagcaagagaraagcatctagtcacatataagggaat
ccccatcagactaacagtggatttctcagcagaaaccttacaggccaggagagaatgggatgacatattc
aaagtgctgaaagaaaaagcaaaactgccagccaagaatactatacccagcaaagttatccttcaaaaat
gaaggagaaataaagtctttcccagacaagcaaawamtgagggaattcgtcaccactagaccggccctac
aagaaatgctcaagggagtcctamacctggaagcaaaaggacgatatctaccatcatgaaaacayacaaa
agyataaaactcactggtagagcaawcacacaaakgagaaagagaaaggaatcaaatgktaccactacag
aaawccaccaaaccacaaaganaaacaatgagaggaaacaaaagatatacaaaacaaccagaaaacaatt
aacaatatgacaggaacaagwcctcacatatcaataataaccttaaacgtaaatggattaaatttcccac
ttaaaagatanagactggct
>L1PA12_5   Primate L1PA12_5 repetitive element - a consensus.
ggaggtggccaagatggccgactagaagcagctagtgtgtgccgctctcatggagagaaatggaaggggn
gagtaaatacagcaccttcaactgaaacatccaggtacacgcattgggactaatcaagaaaacaacttga
cccatggagaacggagaaaagcaaggcaggacgacggcccacccgggagcgacacggagccaggggagcc
tcccccgcccagggaagtggtgagtgaatgtgcggccccgggaacccacgcttctcccacggatctttgc
aaccctcaggtcaggagatcccctcgtgaacccactccaccagggccttcagtctgacacacagagctat
gtggagtctcggcagagcagccgctcaggcatgcgtggagaccctggagccttagatacccgggcttccc
ggcaaaagtagctgcaactccagcaaagcgggaggttagacccccatacatacccctaggaaagaggctg
aatccagggggccgagcagtgayagtctgcaggccccacttccacrgcacctcacaggataagacccact
gacttggaatttcagcyagccacyggtagcagcgttgcacctmcctgraacrgagctcccagggggaagg
ggcgggctgccatctttgctgtttgggcgacttagccattccagccttcgggctttggagagtccaagcc
aactaggggcagaagsgatcccccagcacagmmcagcwgctctaccaaaacrtggccagactgcttcttt
aagtgggtccccgatcctattcctcctcgctgggcgggacctcccaaccggggcctccagccacccccgc
tggtgttytctagccgacagagatttgtaattctccctgggacggagttcccagagggaagggcgggcca
ccatctttgctgtttgrgcggctcagccgttccaaccttcgggctttggagagcccaagctgaccggggg
cngaaggaatcccccagcacagcacagctgctctaccaaaamgcggccagactgcttctttaakcgagtc
cccgatcccatttctcctcactgggcgggacctcccaaaccgggtctccagccacctcctgcakgtgttc
tcnggctaacagagatttgaaccyccctgggacgragctyycagagggaggggcaggcygccatctttgc
tgtttsrkarmcttmrctgttsawaccttcaggcwytggaraattyaaggcgacyagggkctrgancgga
cccccagcacagyacagcwgcyctaysraaawgtggccagactttttkttaagtaggtcccnaatcccnt
wtctcctcactgggtgggacctnccaaccagggtctccagccacctcctncaggtgnttttgggctggca
acaggtccgtacctccctgggacgaagctcccagaggcaggggcaggctnccatcttcgctgtttcgtag
ccttcactggtgatacctccaggtactagaaaatncgaggtgactanngactggagcgggcccccagcat
attrcagcagccctacggaaaagtggccagactgttatgtgggtscctawtcccatatctcctcactggg
cgggtcctccaggcctgggtctccagccaccacyyaccggggctgtcgngccagtaccarctcwgcaact
ccctggacagagccyccaggggaaactgaaagcctctctgccactgcctctgcagtggaactgcccttgc
taccctcagactaacgaaggagsaaagaccctaagtgccttatccacacctccaacaagctgcagtcgac
ccaaggagaggaggccagtctgtctcycacnggtcccacmcaccccccacwgcttgtcaccasrcaggra
acccctggcttgggcccacagcacagaccctccatcctgggctgactgcactgagcgattgctgacctgc
atctctctggggtggagcccccaggagacaagcaaaagaccctcggccacaaccactactaaggtccctt
cctccgckgcctccaagttggggagaaaacataaaccctgagatcaccccagagctgttatgngcagccc
ggnagtgccaagntacgatctacagccagcactcaagtgngagaggagnccacactttcatagcattgag
agggaacanggctgcaaangtgaggaaatacaggggagccacacgactgagcaagagcctaccaactgac
cactnnanctaagngtcacctactggatcacgccctaaagcttcaagaccaaaagtacttcacaaacata
gccccctgtgaaacaagagacaggaagtaagcttcaaataaagaccatgcacaaagcctcagcccagtga
aaacatccaaaaaggaagtctattgattgtattcaatgcacactgcagttaaaggaanatccacanacag
agatgagaaagaaccaacgcaagaactcgcgtaactcaaatggtcagagtgtcttatgtcctccaaacga
ntgcatagttttccaacaaaggttcttaactaggctgagttggcatgaatgacagaaatagaattcagaa
tatggataggaacaaagatcattgagattgaggagaatggcataacccaattcagggaaactaagaatca
caaaatcatgataaaacgatacaggagctgaaggacaaaatagctggtataagaatgaacctaacaaata
catctgatagagatgaaaaacacactacaagaatttcacaatgcaatcacaagtattaatagcagaataa
agcaagctgaggaaagaatctcagaaattgacaactggctctctgaaataagacagtcagacaatcacaa
agaaacaagaataaaaaggaatgaacaaaacatgcaagaaatatgggattatgtaaagaggccaaatgta
tgaacgactggcatcactgaaaggatggaggagaaagcaaacaacttggaaaacgtatttcaggatatcg
ttcatgaaaacttccgcaaccttgctagaaaggccataagtcaaactcagaaaatatggaaaact
>L1MCA_5   Primate L1MCA_5 LINE1 repetitive element - a consensus.
gaaagaaatgaaggaaccattaaaaaaatataataaagacttctggtttccagttcagcatgtaaggagc
ttagaagtcgccactccatcctaacaacaagtaaaaagctgaacaaactgaaaaatcaacaactcttctt
agatccatcagagaagtgaggtcacagggcaaaccactgcccccaaaattggagagacagacaggtgaat
acagagaatcacaacttaccagagcagaaacccacaagcagaaaccttccacaggaaccagtgccagggt
aggaaaacctgaactgtaattgatraattgctggaggctcagtgtggacaagtctgagagtgagttaaaa
actccagggggacccagtcatagggggggccccccacacttttgtgagttttacctccaggagctctacc
aggttctcacagtgaatatcagagaaaaatccccttgtgcttcyngcagggggaggggaaaaggaaccat
tttgaaatatgccagagcattctgttcttcttaacaaggcctgccctcaggagaaactattttaccagag
cctaacctgctggggttttatcagagcctaactgacctgggggaagggaaatacccaactccagctccct
ctagccttccacatgggggaagggaaatacccaactccagcccactctagccatcctgtcccacctaaag
ggggagaaaaaaactgagaagcacttgtgaagttcacagtccagaggcacaggctcactaaaagactgag
acctaatcataggactatagaatgcttcccctccccccmccaacacacagccacacaccttaccaccaca
ttaactaaaggcctatttacagcagttccttttacccagtacatcatgtctagctttcaacaaaaaatta
caaggcatactaaaaggcaaaaanaaaaacaaaaaaaaacaaaaacacagtttgaagagacagagcaagc
atcagaaccagactcagatatggcagngatgttggaattatcagactaggaatttaaaacaactatgatt
aatatgctaagggctctaatggaaaaagtagacaacatgcaagaacagatgggtaatgtaagcagagaga
tggaaattctaagaaagaatcaaaaaaaatgcagagagatggaaattctaagaatcaaaaagaaatgcta
garatcaaaaacacttgtaacagaaatgaagaatgcctttgatgggctcattagtagactggacatggct
gaggaaagaatctctgagcttgaggatatgtcaatagaaacttccaaaactgaaaagcaaagagaaaaaa
gactgaaaaaaaaaagaacagaaatatccaagaactgtgggacaactacaaaaggtgtaacatatatnta
atgggaataccagaaggagaagaagaaagagagaaaggaacagaagaaatatttgaagcaataatgactg
agaatttccccaaattaatgtcagacaccaaaccacagatccaggaagctcagagaacaccaagcaggat
aaataccaaaaaaaaaaaacaaacaaaaactacacctaggcatatcatattcaaactacagaaaaamaaa
raaaaaattcaaagataaagaaaaaaatcttgaaagaagccagaggaaaaaacaccttacctatagagga
gcaaagataagaattacatctgacttctcctcagaaaccatgcaagcaagaagagagtggagtggagtga
aatatttaaagtgttgagagaaaaaaacnaaccaacctagaattctgtaccctgtaaaattatccttcaa
aagtgaaggagaaataaagactttctcagacaaaaatt
>HAL1   HAL1 repetitive element - a consensus sequence.
aagatggcagattgaacatatacatttatttttctccctcccaaaaccccactaaaatgacaataaagga
attttttaaaagacataaacccacaaggacaaagagaacaggagaggagacaatagcaacaaaattttgg
aagctggaaagcagatggataagtggtaactgacttagcagacctgagaaagctgaatcctaagccagca
gtggggaaagccaagaagcaacccaatttacaccgccagaatcctccccaaaaggctcaggaattggtgg
caccaggtacctctggaagtgggggtgaaggtgaggctaaaaacagggaggattgattgaaagtctgttt
aagaagcagttagatccccagattccctcccccactctatngcagccagataactgatcctcctccaccc
tagcagaagactggaggtttattctctggagaggataaaacaaaggggtctctggactggggaacaccag
gcacagttgagggcagaggggnactgtactgaaaacaggggaattaagtgaaagtttacatactgaatgt
tgagactcccagccctcttcccccattcagctcccagaatgctggcagccaggcctataccctccagaca
ggagattagaagagntcttctctggagaatctgaccagcccaagagaaaagacttaaaaatactgataat
agaggttccccaaacaaaatagcccagccagatcacccctatagtgaagcccacmacctggcaagcccca
cccacgcactcagagcttccaagtcgctttttagtstcccactcttaaatatgagcagacagccaaggat
caccagacatctgaggaaancctctaatatggcagacaganaaataaaaacagagaaaaacawwntntat
ccatgaaacaagaayaggatgctataaaaaggaacattcagagaacaaaaagaagctcttggaaattaaa
aacgtgagagcagaaattaaaatttcaatagaagggttggaagataaagttgaggaaatctcccagaaag
tagaacaaacaaaggataaagatacggaaaataggagagaaaagaattaaaaaaattgaggatcagtcca
ggaggtccaacatccaactaatagaagttccagaaagagagaacagagaaaaagatggaagagaaattat
caaagaaataattcaagaaaatttcccagaactgaaggacatgaatttccagattgaaaggncccaccga
gtgcttaccgcaaaaatgaaggaaaaaaatagacccacaccaaggcacatcattgtgaaatttcagaaca
ctgaganaaaaggaaaatcccaaaagcttccagagagaaaaaaaggtcacatacaaaggatnagaatcag
aatggcatyagacttctcaacagcaacactggaagctagaagacaatggagcaatgccttcaaaattctg
agggaaaatgatttycaacctagaattctatacccagccaaactatcaatcaagtgtgagggtagaataa
agacattttcagacatgcaagatctcaaaaaatttacctcccatgcaccctttctcaggaagctactgga
ggatgtgctccaccaaaacgagggagtaaaccaagaaagaggaagacatgggatccaggaaacaggggat
ccaacacaggagagaggtaaagggaattcccaggatgatggtgaagggaaattccaggatgacagctgtg
cagcaggcctagagagcaaccagtccagattggagcaggaagatggaaggctccaggaggaatgttctca
agaaaatagaanacaaatgaaactgatagattatctgatgtgtttgaatatattgagaggntatnattta
gwcatgtgaaagtttgggggagaattgaattagtgataggtacanagaaaactaagcaaatgaaaaaaag
caagacaattattaactccagggaaaacaaaaagttgtacaagaaaggaaatgtaatcatagtacactac
atggctcagctgtgaataacatatttacatagtcataataatgtaaacactraatactgatttaaccaaa
attatgatataaactatattgggaggataagaaatggaaagggtgtgcgtatkgtgtangnggaatgara
gaantaaatcctcatcttccatagtaggaagtcartagataatgtctaaaactgaaaaatcaagaaatag
caatataagcatgttatttagaaatatggaggtaaatattccaaaagaatcagctaaaagagttgaaagt
ggttgcctctggggaaggagctgnaggtggtgaagagngnagggacggggaaytgctgttttttataagc
cttttagtactatttgaccttttaaactatatacatrtattactttaatttaaaaaantaanttataaaa
aagnaaataagta
>L1MC5   3'-end of L1 repeat (subfamily L1MC5) - a consensus.
aaaaaaaaaayacatttctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatga
gtaccctyaggacccagattgtggtctctaaataccatttcccactaaaaggaaccagggctccttggag
aaatggctaattccaggtctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagata
gcaaggaagctataaaactactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgg
gacaatttgagcatcaataataactgcaatttaacacatcaaatatrtttaaatccatgagtttataata
aaaaaatctaattggtcacctttggagtgatgctagggaaccaactcattattttgaaaactggtaaata
aagggaaagaatcaagcatttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwga
tgagggaaatttctctttatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcac
cattttgcaacccctaatgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaac
tarasatytgcctcctgatggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatca
aacctgaatctgatcaagcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatg
ttaaatgacaccatrgggatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaac
ttttcttcaacaaataaattatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaa
agacatatcaaccaattacaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaa
atatatrtgtatacaattggaaatttgaacactgactagatatttgatgatattaaggaattattgttat
ttttaggtgtgataatggtattatagttattttataaaatagtccttatcttttagagatacatactgaa
atatttatagataaaatkatatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtg
gagctatagatgaaacaaaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagt
tcattatactattctctctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgt
tggacattaatttgttggcaa
>L1ME4   3'-end of L1 repeat (subfamily L1ME4) - a consensus.
tttggcaatatctatcaaaatcacacatacatttaccctttgacycagcaatcccacttctaggaattta
tcctacagacatacttgcaacatgtacaaaatgacatatatacaaagttantttattgcagcattatttg
taatagcaaaaaaytggaaacaacctaaatgtccatcaataggaaaatggttaaataaattatggtatat
ccatacaatggaatactatgcagctataaaaaagaatgaagaagatctctatgtactgatatggaatgat
ctccaggatatattgtttaagtgaaaaaagcaaggtgcaagaatagtgtatatagtatgctaccttttgt
gtaaaaaagaaggaaaaataaaaatatatatatatatttgcttatatatgtataaaataactctggaaaa
ataaacaagaaactnataacagtggttgcctcttntggggggaggggaactgggnngntgggtggctggg
ggacatgtgggatggacagggatgggagggactgacttttcactgtatacctttttgtactttgtacttt
ttgaaattttgaaccatgtgaatgtattacctattc
>L3   Human LINE3 element, 3' end - a consensus.
attatattcagttctgggtatcacattttaagagagacattgacaaactggaacatgtccagagaagagt
gaccagaatggtaaagggtctgaaaaccatgtcatatgagaaatagttgaaggaactggggatatttagc
ctggaaaagagaataggggagacttagagggagacatgatagctgtcttcaaatatttgaagggctgtca
tatggaagaggaattagacttattcttgtgcagctccagaggacagaacaaggaccaatgggtggaagtt
acagggaggcagatttcagctcaatataaggaagaactttctaacagtcagagctgtccaaaaatggaat
gggctgccttgggaggtagtgagctccctgtcactggaggtattcaagcagaggctggatgaccacttgg
cagggatgttgtaaaagggatttctgcattggatgggggattggactagatgacctttaaaggtctcttc
caactctntgagattctatgattctatctttcaggga
>L1M3DE_5   L1M3DE_5 LINE1 repetitive element - a consensus.
gcacacttttccagcwgctgcctgagggtctggcttctaactagcctgcatctgggagctgatagggcag
ataaacaatagacctccaggagcctgaacaggaggttggcacttcccatgccttctccccagctcactcc
agtgataaatccaggtctacagattctccctggaaggagtttgtccacacatcaagcgccccaactttta
tagcttccacccaagggactggctcctaaatcacctagctctgggagttgatggggctttgcatttatga
gtctccctagaccacagagaacaaagaggtggttttaaaacaggcacacttccagcagctatctccccag
gatcagagggtgcagcctgaacatgagtacaggnatttgccacagatcctctccctggcttagtgcagag
agagtgggagataaacacccatgctcagcttcaccstgaagatagaagaaactggaacatacatccaaca
ccctaacctttccagctacatctagagagtctggtttctaccttacctgtctyagagtactracaggata
tggcacatcctaatctccagggggccaccaaaaacanaga
>L1MED_5   L1MED_5 LINE1 repetitive element - a consensus.
aaatcacaaaaacacacaaagaaacaagacaccantgagtaaatcagcagaaacaataaacaacagacac
acanagacttcagatatttggaattttagataaataatataaaataaatattttaatatatttaaagaaa
taaaaaattaaaaaattaaaaaaaaaaaataaaaaaaattattaaaaaaattaaaaagcagatttaaaaa
aaaaaaaatcaaatagaacttttagaaataaaaaatataataattaaaatttaaaaatttcattggaaag
ttttaacagcagattagaccaagtagaagagagaattagtgaantggaagatagatttaaagaaattatc
cagaatgaagcacagagagaaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaaatatgcaaaaaatatgg
gaaaatttcaaaatatntaaaatatatctaataagaatttgtgttccaaaaagagagaatagagagaatg
aaaaangggaagaaaaaatatttgaagagataatggctgnaaaattttccagaattgatgaaagacatca
atcctcagattcaagaagctcaaagaataccaagcagaataaatacaaaaaaatttacatctagacacat
aataatcaaactgtcaaaagtcaaagataaaaaaaagatcttaaaagcagccagagagaaaagatagatt
acctaaaaaggagcaacaataagactaacagcagacttctcancagaaaccatacaagccagaagacagt
ggaatgaaatctttaaagtgctgaaagaaaataaaaaantatcctnctatcaatctagaattgtatatcc
agtgaaactaaccttcaaaaatgaaggagaaataaaaactttttcagacaagcaaaaanaanagctgagg
gaatttattaccaccagacctgcaagaaatnctaaaggaagtacttcag
>L1ME5   3'-end of L1 repeat (subfamily L1ME5) - a consensus.
ctaaggaaagaattaaaaaaagtacaaaaatatatattcaagaattttcatttcaatattggntttaaaa
caataaaatatttggaaacaatctaaatgtctaataatgggagaataaataaattatagtatatctataa
aataaaatattatatagctattaaaawtatatttttaaaaaatatttaatgatataaaaaaatntttata
atataatattaaataaaaaaaataaattataaaattatatatataatataattttatatnttaaatatat
aatatatatataaatatatatatatatatatnaaataaaaaaaaaagactgaaaggaaatatacaccaaa
atgttaacagtggttatctctgggtggtgggattataggtgatttttatttttttttttttttttatatt
ttctgtattttctaaattttttntaaattttctacaataaatatgtattacttttataatcagaaaaaaa
ataaaaataataaaaat
>MER2   Nonautonomous DNA transposon.
cagtcggccctccgtatccgtgggttccacatccgtggattcaaccaaccgcggatcgaaaatattcaga
aaaaaaattgnatggttgcgtctgtactgaacatgtacagacttttttccttgtcattattccctaaaca
atacagtataacaactatttacatagcatttacattgtattaggtattataagtaatctagagatgattt
aaagtatacgggaggatgtgcgtaggttatatgcaaatactacgccattttatatcagggacttgagcat
ccgcggattttggtatccgcggggggtcctggaaccaatcccccacggataccgagggacgactg
>MER6   Nonautonomous DNA transposon.
cagcaggtcctcgaataacgccgtttcattcaacgtcgtttcgttataacgytgatgagraaaaaaatcg
attcccggccggggccactgtctgtgtggagtttgcacgttctccccatgtctgcgtgggttttctccag
gtactccggtttcctyccacatcccaaagatgtgcacgttaggttcaytggcgtgtctacatggtcccag
tctgagtgagtgtgnntgtgtgtgtgagtgtgccctgcgatgggatggcgtcctgtccagggntggytcc
cgccttgcgccctgagctgccgggataggctctggccacccgtgaccctgaamtggaataagtgnrttgr
aaaatgaatraatgaatgartacgaattattataaaataaaaatttgtaaagtctatgntaatcttacac
atacatgacaatacatgaaatggtaagaaagtgatcagtgagcctgccatatatgttattgcttgtttct
gaactgagtggtgggaggaggtgttcctaacaatgttcactttgcagacatttatttctttatttaatcc
attatcactatgaccactgtcattcagtkattcwccaaaaattgggtaaataattatcwtryttgttttt
attaatctttcttaaatgtatgtatagctcacatttatttcagtgtttaatattagaagtgttttgggtc
tttatttagaagtttggtgatgtttttgtgaccagaaatatgccataggaacttaactcttgtttatatc
aattagcctrtggtaaaattggtttcgttatacgtcgtttcacttaaagtcgcagtttccaagaacctat
caacgacgttaagtgaggacttactg
>MER44A   Nonautonomous DNA transposon.
cagtagtccccccttatccgcgggggatacgttccaagacccccagtggatgcctgaaaccacagatagt
accgaaccctatatatactatgttttttcctatatatatatacctatgataaagtttaatttataaatta
ggcacagtaagagattaacaataactaataaaatagaacaattataacaatataccgtaataaaagttat
gtgaatgtggtctctttctctcaaaatatcttattgtactgtactcacctattttcggaccgcggttgac
catgggtaactgaaactrcggaaagtgaaaccgcggataaggrgggactactg
>MER44C   Nonautonomous DNA transposon.
cagtagtccccccttatccacgggggatacgttccaagacccccagtggatgcctgaaaccacggatagt
accgaaccctattgctatcagtcttttggaacatgtttctgttcatgtcttctgcccacaaatttaatgc
ctcttccacctcaactaaacacgtatcatgcactccggccatcacttttgcagtttgaggtatgacatca
aaactagcatgaatttatttttccttcttcacaattccaaagatggaagattctttcttaccgtagatct
tagcaacctcagcatacgattatttttcytttctttttaagtcaagaactttcaccttttcgcttaaagg
aagcactttacagcttctytttggcatgtccgaattgccaccaacactactcttgtgcttttgggccatt
attaagtaaaacgggagttacttgaacacaagcactgtgataccaagacagtcggtctgataactgagat
ggctactaagtgattaacaggcaggtagcgtanacggcgtggatacgctggacaaagggatgattcacat
cccggatgggacggcgcgaaatttcatcacgctactcagaacggcgcgyaatttaaaacttatgaattgt
ttatttctgnaattttcaatttaatattttcggaccgcagttgaccacgggtaactgaaaccacagaaag
traaaccacggataaggggggactgctg
>MER45   Nonautonomous DNA transposon.
caggaccggctacataatttgcgggrcccagtgcaaaatgaaaatgcggggccccttgttcaaaaattat
taagaatttcaagacggcgacagcagagcattaaaccaagcacggggcccttctragcgcggggccctgt
gtgactgcacaggtcgcacgcccatgaagccggccctg
>MER63C   MER63C repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaggwaatgymtkgatttgtgtattca
catatataagtttattataaattttactgatataaaggacgtrtagcacacaatttacaaataacaataa
aatatacaatattctttattgtaaattccatatagccagttgattctcacagaatgctttcgttgatttt
tgcccaaactcttgtatccgtagccgaactatgtttgtaattgacgaacaagtgtagttcnaacatgaat
gttggttgatattttcgtttatgttaatgagtaagatgaaagtgaaacaacgaagacgtatgtcagaact
tcactcatttgtcaatgatgtgagtgacttctttgctgaatcggatggtagttttcaaacattagaagaa
tattttctcaatttttggtgctattcgcaatgtaacagctacagacatgacacacttttaagtttaatct
gcatcattaacattttctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctga
tttgtagcgtttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccagcgtgat
gtcactgaatgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagat
acaatagacgtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatga
gttttgagtatttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttc
tttgtttttaatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccg
atacgagccagctccagcacaccactgg
>MER69A   MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcataggccccttc
caaggccctgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgt
ataagcttcaggccccacaaaacctggatctgcccctgg
>MER69B   MER69 repetitive element - a consensus.
cagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccacaattggttaagactgctgtctctttccactccgacttcccctccatcacacttcccc
tcatgtcgggtggtattggagtggccgtgggcatttttgggatctggctaagggaaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtataggaatggcttccaggaayattcctactgcccactgtgccgactcacccagc
gtcgtgacmtgaggcacaggaccggagrtcgtatcgcgatatgaacgtgtcctacggcacctggcaccgg
aagtatgcgggtagtggaggagaaacaaggtttgaaatgtacagagccagaagctagtctgtggaaaatt
cttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgatgcctagycagagcaga
agttctctcctgtcagaaatatactcgataatgcagcgtatacaattataaatgcamcatgcatttattt
gcatttttggaagggaatcatgcgaaatagaatttatcagaantccttgtttgtagggcacagatctrta
gcagtactacaaacagtgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgctgatatga
catgaaatwctgacgttaacgaagataacasttcacttctaatttaccatgacaaaaaagacatcagtga
caaactggttactgagtgtcattaattctaagagyatttaagattagtcactgcacaagaaaacttgaaa
tgccctgaaatcttacagctcatatatgaaagaaacttgataggggtttccccaaatttgacaacaattc
taaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaacttttctaaactatcaataat
aaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctatagaaaat
attacaaaatcgttgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaaaartat
tatagaagtgtgtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatgtttgtg
gtatttgtcaactttttaaaatttgtaatttgttgcgatttcttttctcattctaaataaatattcactt
ttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgtataagct
tcaggccccacaaaacctggatctgcccctg
>MER80   MER80 repetitive element - a consensus.
caggggttcttaaccttttttgtgccatgggcccctttggcagtctggtgaagcctatggaccccttctc
agaataatgtttttaaatgcataaaataaaatacataggattacaaaggaaaccaattatattgaaatac
agttatcaaaatattaaaaaaccaaatttgtgatatagtaatatatgtgcttctttattaatgcattaaa
taacaagatctagcggcgggtctaataactaccgtaatttcgaagtagtgatgagcataaatgatatttt
gagatatctgcaacaactgtaatgtgatatgaaaatatctgtgatttctattggtgacaaagtcacaggt
actgctaatactactgtggtttgttgcctacattcataattgaaggaaatgctaaatttcagttagaggt
tagtgaaaataaagatgtaanttttttccccatccaagttcacggaccccctgaattctatccatagact
ccaggttaagaacccctg
>CHARLIE1   Autonomous DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgacatcatcgctctgatggctaatggaatgtgtgctt
gtgtattcttgtgttttctaaaatttttaaggtagtaggtttagggtataaatatgtaggttttcagaga
ttaactcagtttsttcttagcacttctaccgtgctcttactagctatcttcagttatacctgctataatc
tttgtaacctcattatcgtccaataaatcattattttraaatcctaaagttttcctcgwgcctatgtgaa
aacacaagaagcaagtactacttgtaaaacttgcttgcaataacattttgaaaatttcccaaatgtttaa
attttatcgacaacatatagaatttaatattttattctaaaataaaaatttatttataawgtttttccta
tatttaagggtggattgttggcttaaaaaagggagattagaagactcgctttctcaacccacagctgcam
catctatgtctaaagatgctgaaatggacataccagcaagttctctgattcctcatggaarggaggaatc
tactccaaagaaactgggcgaaactgtaaataaaaaacaaaaatatgataaaagctatcttctcagcttt
atagatgttaataatttaccttattgtgtcttatgcaacagaacattttcgaatagtattatggtgccag
ttaagttgcggcatcattttgagaccaatcattcagagtttaaagaaaaaggaattaaatattttaaacg
tagatgtgatgagctctttaaaagccaaaaattgtttgttgcagcttttcaaactagaaatgaaaaagcc
actgaagcatcttacaggataagttgccayattgcattggctggagaagcmcacacaataactgagagac
taataaagcctcgaacagttgacattgctgaatgcctgctggatgaaaagtcagtaaaagaaatcatagc
actgccactttccaatgatacgataactcgtcaaattaaagatttagctgcaaacatgaagaccgagtta
atatntcatctgcagaattgtacttttgccttacaaatggacgaatctacagatgtkgctagacttgctg
tgttgcttgcgttcgtctggtatcagcaccaactgatcatcgaagaacttcttttatgtgaattcttggc
aacaaacacaagtggtgatgaaatattcaaagtgttgaatgacttttttgaatctcatgatttatcctgg
aacaactgtgttgacatttgcactgatggtgcaaaagcaatggtgggtaaaactgctggcgccttagcac
gaatcaaggcagtggcaccaaactgtactagtagtcattgtattcttcaccgccacgcactcgcagtwaa
aaaaatgccagtttcacttaagaatgtccttgatgaagcagtaaaaattattaattttattaaatctcaa
cccttgagtacacgtctttttaatattctgtgtgacaaaatgggaagtacgcataaagcacttctgctgc
ataccgaagtacgatggttgtctcgaggaaaagcacttgtgcgattgtttgagttgcgagctgaactagc
tgcttttttcatggaacaccatttttacttgaaagaacgactgacagacaaactatggttattcagactt
gggtatttggcagacattttctcgaaaatgaacgaagtgagcctgtcacttcaaggaaaacaactgacag
tatttgttgccaatgataaaattcgagctttcaagcgaaaattagaattttggaaaacttgtatccgcca
ccgtgagcttgacagcttcccaatacttaaagacttttctgatgagatcggtggtgatattaacgaatgt
gattttttgatattgtataatgaaatgtgtcaacatttggaagatctgcataactcagtgaaccaatatt
ttccaaatgaccaatgcatgatgttacaaaatcatgcatgggtaaaagatccattcaaagtgcaagatag
accaatggattttaatgtaacagagtatgaaaagttcattgatatggtttcagattccacattgcaacta
acctttaagaaactaccacttgtcgagttttggtgtagtatcaaagaagaatatccacaattatctgaaa
aggctattaaaatactcctcccttttccaactacatatctgtgtgaggccagattttcttcatatacttc
aaccaaaacaacatatcgcaacagattgaatgcagaagcagatatgagaatccagctgtcttctattaag
ccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcactaaatttttttgttttgga
aaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggtttattattttwaaatgaat
waataaatattttaaaaatttctcagttttaatttctaatacggtaaatatcgatagatataacccacat
aaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtcctgagaccaaaaagtttga
gaaccgctg
>MER45B   Nonautonomous DNA transposon.
caggaccggctacataatttgcggggcccagtgcaaaatgaaaatgcggggtcccttgttcaaaaagcag
gaaaaagtgccattaaaggtactaaaatataaagctttttcctttcttccgtagtctctctctcgacttg
tcatggtgtttttatatttgctatttaatgtcattctaagtaagaaaaattaaaattttaaattattagc
atgaattttaccattcatctttatattgtgcaatgccagttttaaatgcaaatataagagcatttaactc
gtatgcggaatcaccgaaattacacaatttgtattttatagctcgtacatgcgtatgtatttcgttctta
ccagaacagtggaaacgctgcacaaaactaactcaactgtttttatttcacttcttgatacgcgcacatt
ctaccaacactctctacctttggcttactgatgagtaaggaaggactgaaaggaaaaggaactataggtt
gsccnatctttccctttccttctatgtcatcattttcagcgtaagtggttggctaatacagagaagtaac
acgagtaagaaaggatatgacagggttccttggtcgttcgtgtttcttagaatgccattgccttctttct
gtgttcgaagcaagttctagtttgaatggaaagcgtggcctctcggggctgtcagtgccccgcttactca
gtcgtrgatgtaacacgcttaccttgtacttgctttgagtctcgctgaactcccacgcattgtgggycca
ccggaattctgtgctcatggggcaycgcgaatgctatatgcaaatggggcggcaaggaacggcggacaca
catattgcgcgtatctcctctgctcacacacatgctccattgtcccatcagacttcacttacaaaacaca
agttcaaagataaaattattaagaatttcaagatggcgacagcagagcattaaaccaagcgcggggccct
tctgagcgcggggccctgtgtgactgcacaggtcgcacgcccatgaagccggccctg
>MER45C   Nonautonomous DNA transposon.
caggaccggctacataatttgcggggcccagtgcaaaatgaaaatgcggggccccttgttcaaaaagcag
gaaaaagtgccattaaagrtactaaaatataaagctttttctttcttccgtagtctctctctcgacctgt
catggtatttttaaatttgctatttaatgttcatgctccttcaggcacggggatattcactgggtcagtg
cagaccctcacaggtgcccaggrggcctcaccccacgatttggcacgcscacacggcccaccagctgtta
ggttccccctcctgccagccactgggccgacatgccgtggcctnccgggagcggggaagtcgagccaggc
atctctccttcccacgggcctactgccccagcccaangcggatgggtgattcccaagggactgcaacttt
catgccggaatgtggtmggtgcctggatgagaggtggacgagaggctcgcccccgccaagtcacccgcca
aatgtgctgtggcgactgccagttcagggcaggacagctgtcgccaagccccatcccgagataccacggg
gcatgcgcccaaccctgacccttcttgcacccgcgcccgggccctggttcctggcggaggcarggggcgg
cagtggtcgttgggcaagwctgtggagggagaaggcagggcaggtctggggcaccaggagstaggggagc
gggcggccgagaacccgccccggggaggcggggaggcagcgggagrcgggactgcskgtgagcccaggct
ccaagcccccagcacatgctccattgtcccatcagacttcacttacaaaacacaaattcaaagataaaat
tattaagaatttcaagacagcgaccgcagagcattaaaccccaagcgcggggcccttctgagcgcggggc
cctgtgtgactgcacaggtcgcacgcccatgaagccggccctg
>GOLEM   Autonomous DNA transposon; POGO superfamily.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagtatg
ccgtgttagaccggcagcagccacatgcatctcgtgtttaccgcgtctcttgattgcatcattttctctt
gtgcttgatttaatctcatgtgttttgttcatcacggctcctaagcgttcaaaatccacggctaatgttg
ccagtaagaggccacgtcgagtaattgagctggaaacaaaattaaaagtgattaaggaccgccgaaggtg
gaaaatcagtgatggttattgctcgccagacaggtatgtcccattcgaccatagctgccaccttgaagaa
caagagcaaagtgacagaaactgttaaagggtctgcttcatcgaaggcgacgagaccaacaaatttgaga
agtgccaacatcagatatggagaatatctgctaatgacctggattgaaaaccagacacagaaacatagct
ctctcagcaccacgacgaccacggccagagcaaaagggatatttttgatgttgaaagaaaaggctggacc
cgactgtgatatcgaatttactgctagttccgggtggtttaaatgattcgagaatcgttatccattacat
aatgttaacgtgactgctgagtctgtgagggctgacgtgaaggcagctgaagagtttttggaaactctag
atgagtcgtggagaagaaatacttgccagagcaaatcttcaatatggaggaaacctccctattctggaaa
cagatgcctgaaaggactttctgtcataagggggccaagtcaatgccaggtttcaagggttttaaggaca
ggaaacggtcttgctttggggcaatgttgcaggctacaaattgaagccctttgtgatccgacacagtgaa
aaccccagggccttcaagcatatcagtaagcacacgctgccagtgtactacaggagcaataaaaagtcat
ggatgatccatctcctcttccaagatgccctcctgaattgctatgccagagaaatggagaagtactgttt
ggggaataacatacctttcaagattttgcttattgttgataatgctcctgcacatcttccttttactggt
gatcttcatcccaatttcaaagtggtgtttctctctccaaacaccacctctttgatccaatggatcaagg
aattatagcagctttttaaaggcctactaccagagaagggccttcgcccaggttatcactgtaactgagg
aagacactgatgcaattctggaaggattacaacagccaagactgcatcaagaaccttgcttgggattggg
gtgatgtcaccaaggagtgtatgaatggcatctggaagaagacactcaagaggtttgtccatgacttcaa
aggatttgccaaggatgaggaggttgcaaaaatcaacaaggctgtggttgagatggcaaacaactttaac
ctgggtgtggatgaggatgacattgaggagctcctagaggtggttcctgaggaattgactaatgaggagt
tgttggaactggaacaggaatgcatagctgaagaagaggcaagagaaaaggaaactgcaggagaagaaga
agaacccccaagaaaattcacagtaaagggtttagcagaagcttttgcagacctcaacaagctccttaaa
aagtttgaaaacatggaccccaacaccgaaaggttttcattaatagagaggaatgttcatggtgcattat
ctgcttacaagcaaatctatgatgacaaaaagaaacaaaccaagcaaaccatcatggacatatatttctg
aaaagagtgacacctcctcaagaagagcctcaggcaggtccttcaggagatattccagaagaargcatcg
ttatcataggagatgacagctccatgcatgttattgcccctgaagaccttccagtgggacaaaatgtgga
ggcggaagacagtgatattratgatcctgaccctgtgtaggcctaggctaatgtgtgtgtttgtgtctta
gtttttaacaaaaatnttttaaaaaataaaaaaatwaaaaatttwwaaatagaaaaaagcttatagaata
aggatataaagaaagaaaatatttttgtacagctgtacaatgtgtttgtgttttaagctaagtgttatta
caaaagagtcaaaagttaaaaatgcaaaagtttataaagtaaaaaagttacagtaagctatggttaattt
attgctgaaaaarwwwwwwwwwwwwwataaawttagtatagcctaagtgtacagtgtttataaagtctac
agtagtgtacagtaatgtcctaggccttcacattcactcaccactcactcactgactcacccagagcaac
ttccagtcctgcaagctccattcatggtaagtgcyctatacaggtgtaccattttttatcttttataccg
tatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattgcctacagta
ttcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatagcctaggtgt
gtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaattgcctaatg
acgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>ZOMBI   Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>CHARLIE5   Primate CHARLIE5 repetitive element - a consensus.
ctgcgctgtccaatacggtagccactagccacatgtggctaytgagcacttgaaatgtggctagtgcgac
tgaggaactgaatttaatttntattattaatttaaatttaaatttaaaaactgaaacagtataaaatatt
ttnccattaaacayaactttattgttttggtaggactatayttcactttaaccattgcatcgcgkcatat
agatattgttgtattgtagtgcgcgtgtcgggtacgtgcgtcatttctagtattacacgtaaacacatca
ctaatctagtcggtgtcaayagattgattcagttcaaatgatttttttctrtgcactgatgtaacattgt
aatgtgtttatttgaatattttatgcagacagcacgarttacagtgatacctatgtaaatcanaattggt
aactaaattgaaatacttattattttmattattataaattattttcttagttaaaaataaatgtggamaa
atttaaatttaaaacgaaggcatactactgatgtagaattgagtggagatgcagaagttagtactatgac
tagaatagtaaagaaacaagagactggaagaaggtatgtcgcaaatttcatgatgaatggcaattgcaat
ttgctgcggcagagcaaaacaaaaaagctgtttgttgtgwaaaaaatgttaaagataacaaagtagacaa
tattgagagacattttcagcaaatacatagtgaatttgataagtttctcctccaamagtcaaaaaagaat
taacaaaattagtcgnctgaaatcagaattaaatgtccaacaaaaaatatttaataagttttaacagnat
ctaagcttgtaactttggccagctataaaatgtcttggattcttatwcaaaaaaagaaaacaattttaga
tggagagntggtaaaagaaattatttcagttatggaaattttgttagaaagttatgaggaaaagactaaa
aagatattttacaaaaagtgaaagatcttcaattaagccaccaaacaattgcccgtagaatgnaagacct
tkctaacaatatcaaagataaattgattcaaaatttgaaaaattgcaagkactttagctttagatgagtc
gtgtgatatgagacactgcccaattaatactttgggtatgttttactcaaaggacttscaaatttacaaa
gaaatctgttgtcaattcatgncttaaaaaactcgtagcaaagattttttaaactcttttacatctnnca
aagaakaatttcacttagatatgaaaaaaaatktttctatcacgncggatggtgctccagctatgttagg
tcaaaaatccagatttattggaattttaaaacaagagactgatgttttccttattgcttcattccactgw
atgatacatactgaaaatatttgtgctcagttttctgaagcagactccgtgaaaggwgtcatgggtacag
ttgttaaaattsttcagtatatacgtgcaaatgctgtgaatcaccgccagtttatggaactgttgaaaga
aatagaagacaatgaatttaatgatcttgtgttctttgccaatgttcattggttgagtcatagaagagtt
ttacaaagatttactgtactgttaactccaattcaagattttcttgaaacaaaaggaatgcttgccaaat
attcaataatcaaagacaaaaaatggcantgtgatttacgttttctcaccaatatcacactgcatatgaa
caagctaaatttgaagctccaaggaaaggaaaagcttatttgtgacctagctagacaggtataagaattt
atgttgaaattgaaacttttcataatacaaatcaataataatgattttacacatttttctaacgtgaatc
aatatgcagaagattttaattgtaattgacagtattatgtaaattggctgcaaaaactacaagaaaaatt
tgaagaatattttgttgatattgataaatttagaattgcttttcaatttatgcaatacccctttgaattc
aatgttaataatactgagttgacacaagaattagtgaatttacttaacttggacagacatagttttgaaa
ctgatatscttttgcttcaaagtaaaatcaattcttctaaaaaaatgaaccagttttgtcaatgtggatt
taaatattaaaagaaaatgatttttgatactcgattcagttattggaaaacttttaagtatgtttggaac
aacttgggtatgtgaatctactttttcaactgtaaattttatgaaatctaaatacagatcaagtatttcc
gatgaaaatttagcgtccgaattgagatgtgctgtaagtgtaaaatacacaccggatttcgaagacttag
tatgaaaaaaagaatgtaaaatatctcattaataatttttatattgattacatgttgaaatgataatatt
ttggatatattgggttaaataaaatatattattaaaattaatttcacctgtttctttttactttttttaa
tgtggctactagaaaatttaaaattacatatgtggctcgcattatatttctattggacagcgctg
>CHARLIE6   Primate CHARLIE6 repetitive element - a consensus.
ttgcttgkgcccaktttcggkcwgtgatgcaagatangggaagctantgntaantggtgagtgctgcatt
acacagamgagaggggcggtaaaccgatgacatnagtttcccctnctccaattatttcccccagnctccc
cttatgcgntgccggntgacttaaggaacgaacaacctncgctagtataacgaaaatcagagggaatttg
ttttcattctaaggaaggagtttttacgtgccgcanctcagctctctncctgmcactttgttgttaaaac
attgcaaaacgtnggttcaagtaggctagaagtgaattgtncagtgaagttttwttanttttgagatttt
cttgtttangtatgcttttwtgtttttcttttaactaatgtttgtgttttataaacatgtctganagccc
aatgtggcaatttttgaaggcgagatgtgagatggaagaggaagwttctaggcctgggtctacggacaat
tctgataaggntagtgatgaaggattatagccttctgagtatncttcagtgtactagtgcaacaagggac
acaganaaagtctatctttacgacgaaagccacttatcaakggttttatatgggctggtagtccaagctn
tcttattccattgtgnatcgtctgtggcaaacaacttanaaangcagcaatggctccagcaaaattgaaa
aaacaccgtaacnataagtcacagctatttgacaagtaaagatgntgattatttttaaacggcnattgga
ctctcaaaacaaacgagtaaagctttcgttcaaaaawnacntttagtgaaaaggctcaggaagcaagtta
tttagtagcagaacttattgcccagaaaaggaaaagncacanggttggtgagaacctaataatgccanca
tgtaaaattacagtgaatcaaagcctgggcaagatgcagtacgagaaattgaaaaggctccactctcaaa
cagtgcgataagntgacgtattgatgacatgtcacatgatgcnaaagaggttttgtgtaataaactgana
aatagcagcttctctatccaggttgatgagtcaacagatttcactaatanatgtcatgctgtagcatttg
taagatttgtaaaggatggtgaaattcaagaaaacattttctgctgcaaagagctgcccaaaacaaggaa
aggccaagatatanttaatgttttgacttcatatctgnaaaccagaggtctmagaaccgcgctgncatct
acactnatngtgctccgtcagtanttggttcnatgagnnattttgcgttattaaataaaaaaagagaagk
cctknttttcacattacagcacactgctttctccacagagatgctgatgtcaaaaactcttggagataca
gtgaaagttctggataatgttacaaaactggttacctktattaacaaaggccaatttatgcgaaaatktt
aaaaaaaaaaaangagacaacctnggcagasagcacataaacctcctgcaccatacagamatccggtggc
ttmkcagaggaagcgttctcwacagggtgtttgagttgaagggtgaattnccagagtactttcaawanan
ggccggccagnttttgctgagtgctttggaatgaaaaatggctgcagaaagtcgnctacttngcagacat
ttttcatcacatgaaccagtgaacaagtctctgcaaggccctggagaaaatgntttkacttcgagtgaca
agatttttggatttaaaaggaaactgaatctttggaaaagtcatgttgcaaaaggaaatcttgaaatgtt
tccnctgctgcttgggcttgagagtgaggaaggatatcagcmagtctcaagtcttactgaaaaccgcctg
gaagaaccgcagaacaaaacaaatggcattttccctcccnttcaacacaagtgtgtggctaggtgaggga
ccctttctctgaatctgctcagcctgagaacctggctttgagagaagagaaagnactttgtgagttgcgg
tctgatcgcacattcangatgagatttcctkatttttaccctaggcgcgttctggatcccwgtgamagaa
gmmtctcctgccactcgcaggaaagcagtgggcatktktgccgwgsttctcmacctcctkcatgtkgswk
kaacaggctcgctcacgttttactaagnatcaagagcaagngcagaaatnnnctcatttcagttgaaaat
gaaatctttatgtagctgtstsawgctcgatcmataattgagtgaaataaactgatcattaactatgtac
aggtttcatgtgagagagtaacatatttttagtttaagtttcaaaaacaktgttttagtctatgcatgtg
taagcctaaaacagagatcaagaaactaatgtacatatataaaaatattattaacttctaggcctgtatt
tnnacctgatcatgtnactcagtaagaaatgttatnttttcaaagtcttatataaaattgtgcttaggct
atattttattcatatttctttgcttacagttttantagctttactattcaacattgccaataaattttca
tgttgtaaataacattaattaaaatcaatttanaatatttatttaaattaaatctaccgagcctactttt
agaaaaattaaattccattttgnctcaagccagttatttaacagaaatttgcttgtcttatgttttttta
atttatgaaaangaaagaaagatwatttcaagaamagtaagctawgtctaacawcttttttctaggtaaa
akttggmtagawggtmactcttakcttcwaatawggaagaatgtamaactagtcttgtatgtwcmatgt
>ORSL   Origin of replication-like (ORS8) region (a consensus).
ycccatacygtttccrtcactrgtytgwgcaccctctgcarggmagacagcatgayttttyatctttgaa
tycyyaaaasttagctcactgtgtgctcaaacgtgtattgaatgacagttgctatatttgaggacbacat
agattttggggaagacggacaggcacactagcagaaccatacgaaggccaggatcagtcatgaccagggc
tgcattatgacttgtgggccctgagcacttttgcttttatgggccccttcctccataaaaatattaaaaa
ttatattttatgactgcattggtataaagatgagaatataatccaggctgaattaaaacattttcttaga
ctctaaaatttcatttttttctgattttaaaagaaattaaaacattttyatggggccctaaagtattgtg
ggccctaggcactgtgcctactgtgcctaatggataagtcnagcctgaccagggcactctggtgtgaggt
tgaagaaaggaaatttggaacaaagaagccaagtgctctggagaagcaggtgaaacttccactgccgaac
aaaatcagaatgggagcagccatggttaataaggttgtggaagtttagascttccagttcacttcmcctt

>MER99   MER99 repetitive element - a consensus.
aartcagaattcctgnaarttctyagraattytccaartcataagttattcttaaamtaytwcygtctca
aaacaaaacaaaaaaattgtaacatycttcmnacnnyttaytcattatyatrgayatctaaaaatytgtt
trnttaawaacraatattnagcttagtaggatttacaaaraaytayagyytataataaatattcaaacac
tgaaaaacashancaaanattattgggtagtattcaaataacattcagatctcctaacaaagttasgrga
caacactacacagagtcanatgtcnaaactgccaatttaaggacttattttgcttccaaaacyyattatt
tcttggaataccactcataggatttgtataaagtatacnatrcatataaacntattaatatttattttat
ttgcaagaatgattcaccattagcagyakacarggccatgaacacatasttanaatggcaacagctacaa
gcaaggctgactgattaattraatngtgccacttctctcttacgtgytcctgtcctggtttctrgaaata
ccraccttaaccttcaactccatgtgcymanrtttyctgctcytgctttcaacttgntgtcactggattc
cttcaaatcagtaatgtctctatgttgattgttaagttttaatttttcagagaataanattttttcttat
tttcccratttttyaactgatttttcttgggattcagragaaaaatttcttaagaaatgccaggaaggaa
ttcccacttggaaacac
>MER106   Interspersed repeat - a consensus.
cctatttacattaggccatgcattctcaacaggggcaatattgcccccaagggggtgaaaattggttctt
ggggggagaaaaaatcttagatattacaatggtttgtggccctccaaagggccacagtacataaacagat
atacagtatatctgtggtattaaaatttcatggggaagggggtattaggaaaaaaatgtctaaaaaggct
ccttagggggggaataatgaaaaaaggttgagaaacactggtctagag
>MER44B   Nonautonomous DNA transposon.
cagtagtccctccttatccatgggggatatgttccaagacccccagtggatgcctgaaactrtggatagt
acygaacyctatatatactatgttttttccyatacatacttatgataaagtttaatttataaattaggca
cagtaagagattaacaatantaactaataataaaatagaacaattataacaatatactgtaataaaagtt
atgtgaatgtggtctctctctcaaaatatcttattgtactgtactcacccttnttcttcttgtgatgatg
tgagatgataaaatgcctatgtgatgagatgaagtgaggtgaatgatgtaggcattgtgatgtagcgtta
ggctactattgaccttctgatgtctgatgatatgtcagaaggaggatcatctgcttcaggtgatcctgga
tcattgagccatgacaatgtcgatggttggatgtcaggagcagacaatgtcgatgactaatgggtggrta
gcatatacagcntggatacgctggacaaagggatgattcacgtcccaggtrggatggagcaggacagtgt
gagatttcasccatcatgctactcagaacaatacacaatttaaaacttatgaattgtttatttctggaat
tttccatttaatattttcagaccacagttgacyatgggtaactgaaaccacagaaagtnaaaccayrgat
aagggagaactactgtaca
>MER115   Medium reiteration frequency repeat - a consensus.
cactctggccttcctcctgccatgmccctccccanagggyaaggagtccgtagggccaagcatgccaccc
ggagcctatgtctccccttctagaccatgctccgggtaccagaaccctggaatttcctgcccaaatggcc
ctaagcctacttccaggncctgcacgggcctcttccctaggtctgtcctccaaagggtggaccgcactas
tggtgtgyacaccctaggcccaaggggtggccaaggggcagctgtttgtggggggtgtggatggagcttg
gacgtgtgggctggggtgtccacatacatgcacgcgaggcccctcgcggtgcaggacagagcttaggggt
gggaagagaaggggggcaggcaggggccagggccagctctccccatgccgccacattctagcatagaact
ctaaggagtctaagaattctaaatttgaacctggccttccaggtcattatgaaggtatatttgtcaaggt
aggaggatagaacatattttatttaacagtttgttagcttgatttataacttttaaatatttagacatat
ggtatgtgggcctccatttgtactcttgccctaggccctgcaaatgttaggggcaggcctgtttaa
>MER45R   Autonomous MER45 DNA transposon - a consensus.
caggaccggctacataatttgtgrgacccagtgcaaaatgnaaatgtaggancccttttcaaaaagcaaa
aaaaaaatgccttaaagataataaaatataaaattttttttttaaaatattttaacttataaaatgtaat
agggataatagtgatacataaataaattataacaacataaacttataaattgcaaaaaaattattttggt
gtcataattttatataatataataaataataatactttattaatgtgatatcttgattgatccataaaat
ttttttggctcacttttctgcaaattcatttattaggttattaaaatttaaatacttttagcaacttcat
tttcaattgatataattgaaagcaacatcaatcactcttggcaaatgcaagattacaaataattttttat
aatttttaattttgagaaggatctttctgctgatgcaactgttactggagctgttaaragtattttatat
gctgtgacaacattaggatacatttatgataaattattttaaaatataaattttattacatytatagatg
atgattcttgtagaacaatttttctaaaaagatttaactcttcatacaaatcagttttatataagtctga
atttaatttaaattntaaatnttattgtaaatttatacaatgatattttaatgtanttcctctgattttc
tgtaacttgtggaggnttataagctgaaagtggcttcatgatttntatataattcaaaatncctatttat
gcattctatcactg
>MER119   Medium reiteration frequency repetitive element - a consensus. 
tagagcagaggttcccaaactttctcagttcatagtgcccttagtgtctcagtaattttttcatagtgcc
cttaggcagtgtctcagtaattttttcatggcacccctaggccaaaagaaatacctaacagttcyattta
ttaagtagttaggtccaaacaacttaataagtatttatgtcctaacaacttagtagccatttgaaaaaat
aatacacataaattgaaagaaaaaaaaaaaatatttttatttcattcttaaataaccacaattacttact
aatgggatgtgtgtgcctgttgggcactgcacaacttctcaaaccttggaatcagattggacactgccac
cctcatttcctgttccacattgattgnttttcacatagtacttgctttttatcacagcaaccactgaaaa
cccagcttcacaaagatatgatatcatcaaaaggaatgtagcacacatgatctaatgttgaaactgtgaa
ctacctcaagctagtagt
>LTR66   Long terminal repeat from endogenous retrovirus HERVL66 - a consensus.
tgttctgtgcgggaaacgcgtgaggggagaagaaaagacacacacacaatacctttaagggtaaacaagc
tttatcccacgtaaatggcaatgcagatataataagcaaatgatataataagcaaattgatataataagc
aaattgcaatgggaaggggagaagggaaaagatatatatatatgtatatatatatatatatatatattta
cactcaccagactatggaggattcaccaccagactgggaagcaacagcctgggctccagagtcggccact
catccgtgcacagacgaggagaggtctcatgaagcttyggygcagtctgggaccctagctctttttgtaa
cgagttgtttggcatgaggcccagtcacgagggcccttcacgactgggctcaaggaacacaaaaaggtca
acttgtttttgtgattgtctattgtttttcaataactaatgtataggaatagattgaaatagagatttct
ccgaaacagcgctggatgaatgcctcaaggggctcacacaacctgttccaggacttggtgaccattgttt
gtgtccatgttcaattgagttcaaatttaatatttaacttttcctccaca
>THE1B   a consensus.
tgatatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacgtgtcg
tgggagggacccggtgggaggtaattgaatcatgggggcgggtctttcccgtgctgttctcgtgatagtg
aataagtctcacgagatctgatggttttataaaggggagttyccctgcacangctctcttgcctgccgcc
atgtaagacgtgmctttgctcctccttcgccttcygccatgattgtgaggcctccccagccatgtggaac
tgtgagtccattaaacctctttyctttataaattacccagtctcgggtatgtctttattagcagcatgag
aacggactaataca
>MSTA   a consensus.
tgatatggtttggatctgtgtccccacccaaatctcatgttgaattgtaatccccaatgttggaggtggg
gcctggtgggaggtgattggatcatgggggcggattyctcatgaatggtttagcaccatccccttggtgc
tgtyctcgtgatagtgagtgagttctcatgagatctggtcgtttaaaagtgtgtggcacctcccycctct
ctctcttgctcctgctctcgccatgtgacgtgcctgctcccccttcgccttccgccatgattgnaagctt
cctgaggcytccccagaagccgagcagatgccagcgccatgcttcctgtacagcctgcagaaccgtgagc
caattaaacctcttttctttataaattacccagtctcaggtatttctttatagcaatgtgagaacagact
aataca
>MSTC   a consensus.
tgctacggtttgaatgtttgtcccctccaaaactcatgttgaaacttaatccccaatgtggcagtattga
gagrtggggcctttragaggtgattgggtcatgagggctctgccctcatgaatggattaatggattaacg
tattaatggattaattggttatcacgggagtgggatcggtggctctatcataaaarycattttgnctctc
gnrtgngccccttcttgccctttcacgccttccgccatgttatgacagagcacaaggccctcaccagaaa
ccagatgcagccgccatgatcttggacttcccagcctscagaaccgtgagcaaaataaacctcttttctt
tataaattacccagtctatggtattccgttaaagcagcacgaacggactaagaca
>MLT1A   (MLT1a subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>MLT1B   (MLT1b subfamily) - a consensus.
tgttatgggctgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gactgtatttggagatagggtctttaaagaggtaattaagttaaaatgaggtcattagggtgggccctaa
tccaatatgactggtgtccttataagaagaggaaattwggacacagacacgcacagaggraagrccatgt
gargacacagggagaaggcggccatctrcaagccaaggagagaggcctcagaagaaaccaaccctgccgr
caccttgatctcggacttcyagcctccagaactgtgagaaaataaatttctgttgtttaagccacccagt
ctgtggtactttgttacggcagccctagsaaactaataca
>MLT1C   (MLT1c subfamily) - a consensus.
tgttatgggttgaattgtgtccccccaaaattgatatgttgaagtcctaacccctagtacctcagaatgt
gaccttatttggaaatagggtcwttgcagatgtaattagttaagatgaggtcatactggagtagggtggg
ccctaaatccaatatgactggtgtccttataaraagaggaaatttggacacagacacgcacacggggaga
aggccatgtgaagacggaggcagagattggagtgatgcakctacaagccaaggaacgccaargrytgcca
gcaaaccaccagaagctaggaagaggcaaggaacagattctccctcacagccytcagaggarrccagccc
tgccgacaccttsatctcggacttctggcctccagaactgtgagagaatamatttctgttgtttaagcca
cscagtttgtggtactttgttacggcagcccyaggaaactaataca
>MLT1D   (MLT1d subfamily) - a consensus.
tgtggtaggcwgaataatggctccccaaagatgtccacgtcctaatccccagaacctgtgaatatgttac
cttacatggcaaaagggactttgcagatgtgattaagttaaggatcttgagatggggagattatcctgga
ttatccgggtgggcccaatgtaatcacaagggtccttawaagagggaggcagagggtcagagtcagaaga
aggagatgtgacgatggaagcagrragngaaaactcaacgttgctggctttgaagatggaggaaggggcc
atgagccaaggaatgcgggcagcctctagaagctggaaaaggcaaggaaacggattctcccctagagcct
ccagaargaacgcggccctgccgacaccttgattttagcccagtgagacycattttggacttctgacctc
cagaactgtaagataataaatttgtgttgttttaagccactaagtttgtggtaatttgttacagcagcma
yaggaaactaataca
>MLT1E   (MLT1e subfamily) - a consensus.
tgtggtaggcagaattctaaratgmtcccaatgatcctcgcctcctggcgtaatctccttgagtgtgagt
aggacctgtgacttgcttctagccaacggaatatggcaaaggtgatgaratrtcacgtgattacgcgtac
gtgattatgtaasattcagtctttgmcgtcattcttgccgagagactctcctsctggtyttgaagaagta
agctgccacgtcatgagnnnncnnannagarygccgcaaggcaagggnntctagagctgagagtcgccct
tactgatgggcagcaagaagcaagccacctcagtcctacagccgcaaagaactgaattctgccaacaacc
tagtgagcttggaagcagatcctgcccagtcgagcctccagatgagancgcagccctggctgacgccttg
actgcagccttgntagaccttgagcagaggacccagctaagccgtgcccagactcctgacccacagaaac
tgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgttacgcagcaatagaaaa
ctaacaca
>MLT1F   (MLT1f subfamily) - a consensus.
tgtggtagccagcctccaagatggcccccaatgatccctgctcctggtattcacayccttgtatggtcyc
ytcctacattgaryyagggctrgtctgtgtgaccaatagaatagggcagaagtgatggcgtgtsacttcc
aagaytargtcayaaawaacactgtggyttctgcyttgntctcttcgggctactcactctgggggaagcc
agctgccatgctatgaagacactcaagcagcctatggagaagtccacgtggsaaggaactgaggtctcct
gccaacagccagcttcgacytgccagccatgtgagtgagccatcttggaagcggatcctccagccccagt
yaagccttcagatgactgcagccccggctgacatcttgactgcaacctcatgagagaccctgagccagaa
ctacccagctaagctgctcctarattcctgacccacagaaactgtgagataataaatgtttrttgtttta
agccactaagttttggggtaatttgttacgcagcaatagataactaataca
>THE1BR   THE-1B Mammalian LTR retrotransposon internal sequence - a consensus.
gtaaattggtaccagtagagtggggcgctgctgaaaagatacccgaaaatgtggaagcgactttggaact
gggtaacaggcagaggttggaacagtttggagggctcagaagaagacaggaaaatgtgggaaagtttgga
acttcctagagacttgttgaatggctttgaccaaaatgctgatagtgatatggacaataaagtccaggct
gaggtggtctcagatggagatgaggaacttgttgggaactggagcaaaggtgactcttgttatgttttag
caaagagactggcggcattttgcccctgccctagagatttgtggaactttgaacttgagagagatgattt
agggtatctggcggaagaaatttctaagcagcaaagcgttcaagaggtgacttgggtgctgttaaaggca
ttcagttttaaaagggaagcagagcataaaagttcggaaaatttgcagcctgacaatgcgatagaaaaga
aaatcccattttctgaggagaaattcaagccggctgcagaaatttgcataagtaacgaggagccgaatgt
taatccccaagacaatggggaaaatgtctccagggcatgtcagagatcttcgcggcagcccctcccatca
caggcccggaggcctaggaggaaaaaatggtttcgtgggccaggcccagggtccccgtgctgtgtgcagc
ctagggacttggtgccctgcgtcccagccgctccagccatggctaaaaggggccaacgtacagctcgggc
cgtggcttcagagggtgcaagccccaagccttggcagcttccacgtggtgttgagcctgcgggtgcacag
aagtcaagaattgaggtttgggaacctccgcctagatttcagaggatgtatggaaacgcctggatgtcca
ggcagaagtttgctgcaggggcggggccctcatggagaacctctgctagggcagtgcggaagggaaatgt
ggggtcggagcccccacacagagtccctactggggcactgcctagtggagctgtgagaagagggccaccg
tcctccagaccccagaatggtagatccaccgacagcttgcaccgtgcgcctggaaaagccgcagacactc
aacgccagcccgtgaaagcagccaggagggaggctgtaccctgcaaagccacaggggcggagctgcccaa
gaccatgggaacccacctcttgcatcagcgtgacctggatgtgagacatggagtcaaaggagatcatttt
ggagctttaagatttgactgccccgctggatttcggacttgcatggggcctgtagcccctttgttttggc
caatttctcccatttggaatggctgtatttacccaatgcctgtacccccattgtatctaggaagtaacta
acttgcttttgattttacaggctcataggcggaagggacttgccttgtctcagatgagactttggactgt
ggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggttttga
aatgtgaggacatgagatttgggaggggccaggggcggaa
>MSTAR   MSTa- LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>LINE2   MIR2/LINE2 repetitive element - a consensus.
ctgtcattcattaccgntccttgttgcagtcatccatcgagcccggctcggtcactccctctcatttctc
gaagaktttrtctcctagntcaactgtcactctctcataataatantcctgtcataattcttggtgattt
caatatccacatagacgatccatccaatactctggcctctcagttccttgacctcctctctcccgtggtc
ttgttctcctctacccactctcagccactcactcccatggtcataccctagatcttgtcattactaataa
ctgcaactcctccataatctcaatttcaagcatccyactcttttaccacyacctcctatctttctagctc
actctctctggtgccctaactccaataatyctttgaccccaccgagacctmcaatccattgatctcatat
gcttttcactgtnccgtgtcctcttccctcctttcwttgctcagattccatggtcaatcattataatcac
tcccwtacanataccctcaactcccttgcccctytctcmctttgtcttacttrcttgncaaaaccacaac
cctggttaaatccaactntccgactaatttrcgcctgcacccgngcagctaaacatggctgragaaaaat
acacaaccatgctgactggtctcactttaaatttatgaccacgaacctcaagtgrgcccttaatgctgcc
aggcaattntactacatttccctagtccattcactctcccactctcctagatgactatttyatactttct
tnyttctcaaacctccaacayyyyytnccatctttactctcagctgatgaccttgcttcctatttcactg
agaaaatagaagcaatcagaagagaatttccacatgctcccaccaccacatctacccacctacctgcatc
tgtacccatatactctgccttccctcctgttaccgtggatgaactgtccgtgctcctatctaargccaac
ccctccacttgtgcactagatcccatcccctcttgcctactcaaggacgttgctccagcaattctcccct
ctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatataaacatgctgnnat
ttctcccatctttaaaaaacaaaaattctccctcgaccccacttccccctccagctaccgccctatttct
ctgctcccctttacagcaaaacttctcagaagagttgtctatactcgttgtctccacttcctcacctccc
gttctctcttaaacccactccaatcaggctttcgtccctaccactccactgaaactgctcttgtcaaggt
caccaatgacctccacgttgccaaatccagtggtcagttctcagtcttcatcttacttgacctctcagca
gcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacaccacac
tctcttggttttcctcctacctcactggccgttccttctcagtctcctttgctggytcctcctcatctcc
ccgatctctaaatattggagtgccccagggctcagtccttggacctcttctcttctctatctacactcac
tccctgggtgatctcatccagtcycatggctttaaataccatctatacgctgatgactcccaaatttata
tctccagcccagacctctcccctgaaytccagactcctatatccaactgcctactcgacatttccatttg
gatgtctaacagrcatctcaaayttaacatgtccaaaactgaactcctgattttcccccccaaacctgct
yctcccgcagtcttycccatctcagttaatggcaactccatccttccagttgctcargccaaaaaccttg
gagtcatccttgattcctctctttctctcacaccccacatccaatcyatcagcaaatcctgttggctcta
ccttcaaaatatatccagaatccgaccacttctcaccatctccactgcyaccaccctggtccaagccacc
atcatctctcacctggactactgcaatagcctcctaactggtctccctgctyccacccttgcccccctnc
agtctgttctcagcacagcagccagaatgatccttttaaaatgtaaatcagatcatgtcactccyctgct
caaaacccttcaatggcttcccgtttcactcagagtaaaakccaaagtccttaccgtggcctacaaggcc
ctatatgatctggcccccgcytayctctctaacctcatcttctaccactttccccctcgctcactctgct
ccagccacactggcctccttgctgttcctcgaacacgccargcwcgttcctgcctcagggcctttgcact
tgctgttccctctgcctggaacgctcttcccccagatatccacgtggctcactccytcacctcmttcagg
tctctgctcagatgtcacctyctcagagaggccttccctgaccaccctatctaaaatagcacacccyctc
ccccatcatgcccatytttcttaccycgctttatttttctycatagcacttatcaccatctgacayacta
tatwatttayttgtttgtttgtttrttgtctcctccacyagaatgtaagctccatgagggcagggatttt
gtctgttttgttcactgctgtatccccagcgcctagaacagtgcctggcacatagtaggcgctcaataaa
tatttgttgaatgaatgaat
>MLT1H   (MLT1h subfamily) - a consensus.
tgtggtagntgattgcaaaaatgacmccattctccacccctccctgtatccatgccctttgcaatgtgac
tttgcagctcctcccatcaagaggcggagtctgtttccccaccccttgaatctgggctggccwtgtgact
tgctttggccaatrgaatgckgcagaagtgacggtgtgccagttccgagcctaggcctcaagaggccttg
cgtgcttccgctcnctctcttggaaccctgccaccgccatgwgaacaagcccgggctagcctgctggagg
atgagagaccacgtggaggagagccgagscgccccagctgaggccatcctggacmggccagcccccagcc
aagatcagcagagccaccaantcaaccagcagctgaccacagatgcatgagggagcccagctgagaccag
aagaaccgcccagctgagcccagcccaaattgccgacccgcagaatcgtgagctaaaataaatggttgtt
gttttaagccactaagttttggggtggtttgttatgcagcaatagctaactgataca
>MLT1I   (MLT1i subfamily) - a consensus.
tggccatgtgacttgctttggccaatgaaatgtgagcagaagtgacatgtgtcacttctaggtagaagca
tttaagagccagtgcgtagattcgccatrattctctttccctctgccatgagaccacaatgttccagatg
gaggctgctccatcagcctgggtccctgagtgaggaatgacatggagcagagccccagctgacctacaat
agacatgtaacatgagtaagaaataaacctttgttgttttaagccactgagatttgggggttatttgtta
ctgcagcataacctagcctatcctgactgataca
>MLT1J   (MLT1j subfamily) - a consensus.
tgtggcagagactgctagttgtcccccaatatccattctccccttcttccttagtaatagaamccccaat
ttttagctgggcacatggccacccagaaataaagactacatttcccagcctcccttgcagctaggtgtgg
ccatgtgactttctaagttctggccaatgagatggtaagcagaagtgatgtgtgcaacttctaggaaatg
tccttaaagagaggggcaygcccttcttttccccttcctccttcctgctgcctggaatgtagatgtgatg
gctggagctctagcagccatcttggaccatgaggtgaaagccacatgctaaggatggcagagcagcaaga
tagaaggagcctgggtccctgagactatggagcagagctgccataccagccctggactgcctacctctag
acttctatatgagagagaaataaattctatcttgtttaagccactgttattttgggttttctgttacttg
cagctaaacctaatcctaacayacca
>MLT1K   (MLT1k subfamily) - a consensus.
tgtggttctrgtggggctgactccaacccctagctccaggggtgggcacatgacccaggcctggccaatc
agagcattccatcccyctggccacagtgattggttcagggatgggcatgtgacccaagctgggccaatga
gagttctcaagccctgggacttttgctggaactattgggaaagagrtgttctttttctcctggggttgct
aagctggtaggatgtaagcctggagctgctggtggtcatcttgccaccacrtggagagagcctgcctgag
aatgaagccaacacagaggaaagcagagccaagagatggagagagacagattcctgatgacatcatttga
gcacctggatccagccatgcctgaagccagatctatgctacccctggacttttcagttacatgagccaat
aaattctcttttttgcttaagcyagtttgagttgggtttcttgtcacttgyaacca
>MLT1L   (MLT1L subfamily) - a consensus.
tgaatcttgattggtctaagccaatcatggtaaatcctattccccttgccagtgattggtttaggaatgg
gcatgtgacacaattctggccaatgagacatgaggggaagtctgctgggngggcttctggaaaagntttt
cttttttaattaaaaaatntaaagagaaaacatgtcctcttttcttgctcttgntttggatgttgttttg
tgaggatgtgatgcttggagctgtggcagccatcttgcaaccatgaggcgacaagcctgagangraaagc
caacacactgaggatggcagagcagaaagataaaaagaacctgggtccttgatgatatygttgagctgct
gaatca
>MLT1E1   LTR from retrotransposable MaLR element - a consensus.
tggtaggcagaattctaagatggcccccaagattcycaccccctggtatcatatrccctgtataatcccc
tccncttgagtgtgggcaggatctgtgaatacgatgggatatcactcctgtgattaggttacattatatg
gcaaaggtgaagggattttgcagatgtaattaaggttcctaatcagttgactttgagttaatcaaaaggg
agattatcctgggtgggcctgacctaatcaggtgagccctttaaargaggytctagaagtcagacatgga
agaagtcagagagattcaaagcagcagagatgctctcctgctggccttgaagaagcaagctgccatgttt
tgtggagagggccatatgncagggantggngagcagcctctaggagcngaagtcctcagtcctacaacca
caaggaaatgaattctgccaacaaccngartgagcttggaagaggatcytgagcctccagatgagaaygc
agccccagctaacaccttgatttcagccttgtgagaccctgagcagaggacccagctaagctgtncccag
attcctgacccatagaaactgtgagataataaatttgtgttgttttaagctgctaagtttgtggtaattt
gttatgcagca
>MLT1J1   Mammalian long terminal repeat MLT1J1.
tggctagctgttcaccaaatctgtttccttttcttcctgggcacacagctagactacatttcccagcctc
ccttgcagcttaggtgtggccatgtgactgagttctagccaatggaatgtaagcagaagtgatgtgtgtc
acttccaggcctggcccataaaacctcccatgccatcttcctctctattctctcttctsctgcatctgct
ggctggatgttaacacccagggtgaccttggaagccatatgttgaagatggcagagcctccatcagcctg
ggtccctgaatgactgtgtggagcagagcaccactcccacccccccatcatcaattggactttacatgag
caagaaataaacttctattgtgttaagccactgagattttgagggtttatttgttacagcagctagtgtt
accttaactaataca
>MLT1J2   Mammalian long terminal repeat MLT1J2.
tgtggcagagactggctaggtgttcaccaaacccatttccttttcctcctgggcacacagctagactaca
tttcccagcctcccttgcagttaggtgtggccatgtgacntgagttctggccaatggaatgtgggcagaa
gtgatgtatrccacttccaggcctggcccataaaaccctccaatayataatcctctctctctctttcttc
mtcbrctggctggatgcagagaatccaaaggactccaaggatggtagagccacaagatggaaggagcctg
ggtccctgagtcactacttggaggagagccactcagcagaaacacccnaccagaaacccacactgaattg
taacatgagtgagaaataaacttttattgtgttaagccactgagatttgggggtttttgttacagca
>MLT1E2   LTR from retrotransposable MaLR element - a consensus.
tgccctaatcctggaacctatgaatacgttacatnacatagcaaaagggattttgcagatgtaattaagg
ttactaaccttaaaatagggagattancctggattatctgggtgggcctaatctaatcacatgagccctt
aaaagcagagagttttctccggctgatagcaggaaatgtaaagcagaagaggaagtcagagagatttgaa
gcatgagaagrattcgatgtaccattgctggctttgaagatggagggggccacgatgcaagaaatggaag
aggcctctaggagctgagagtggctcccagctgacagccagcaaggaaatggggacctcagtcctacaac
cacaaggaactgaattctgccaacaacctgaatgagcttggaagtggattcttccccagagcctccagat
aagagcccagcctagctgacacctttgatttcagccttgtgagaccttaagcagagaacccagttaagcc
tacctggacttctgacctacagaactgtgagataataaatgggtgttgttttaagctgctaaatttgtgg
taatttgttacacagcaatagaaaactaataca
>MLT1G1   (MLT1g1 subfamily) - a consensus.
tgtggcagattgtattttccaaagatggccacaacaatatctcccatcccacatgctcttctttcaatgt
gacctttgccacttcttccatcaagaggtggggtctatgtcccctccccttgaatctgggcagacctttg
tgactgccttgaccaatagaatatggtagaagtgatgctgtgtgacttctgaggctaggtcataaaagtg
ccatgcacttctgccttgctcacttgggacactcactcttggaacccagccaccatgctgtgaggaagcc
caagcagcccatggagagacccgtggagaggatctgaggttcctggtcnacagccccagctgagctccca
gccaacagccagcatcaacttgccagcca
>MLT1F1   MALR long terminal repeat; MLT1F1 subfamily: a consensus.
tgtccacaaattctttgatactcctcttaagaggtggagtctaattcccctccccttgaatntgggctgg
acttagtgacttgcttctaaccaatagaatatggcagaagtgatggtatgtgacttctaaggctaggtca
taaaaggcattgywgtagcttcctncttgctctctctctctctctctcttggatcactcactctggggga
agccagctgccatgtcatgaggacactcaagcagccctgtggagaggcccatgtggcaaggaactgaggc
ctcctgccaacagccagcaaggaactgaggcctcctgccaacagccatgtgagtgagccatcttggaagc
agatcctccagccccagtcaagccttcagatgactgcagccccagctaacatcttgactgcaacctcatg
agagaccctgagccagaaccacccagctaagctgctcctaaattcctgacccacagaaactgtgagagat
aataaatgtttgttgttttaagccactaagttttggggtaatttgttatgcagcaatagataactaatac
a
>MLT1H1   (MLT1H1 subfamily) - a consensus.
tgagancaccatgcttgagaggccacgtgtaggagctcnagtnranagtcctagctgagcccagccttcc
agccatccctaccaaggtaccagacatgtgantaaagccatcttggattgtctaggccagcccakctgcc
agmtgaataccactgagtgaccccagtcaatnctayatggancagaagaatcaccnagctaagccctgcc
caaattcctgacccacaaaatcatgaratataataaaatggttgttgttttaagcyactaagttttggga
tacttttctacacatcaatagataactggaaca
>MLT1G2   MLT1G2 subfamily - a consensus.
tgtggcagattgtattttccaaagatggccacaacaatatgtcccttccacatgctttcttcaatgtgac
tttgacactcttcccatcaagaggtaggggtctatgtcccctccccttgaatctgggtaggcttgtgact
gcttctgaccaatagagtatggtagaagtgacactgtgtgacttctgaggctaggtcataaaaggcaatg
cagcttctgcctgccttgttcgctggaacactcactcttggagccctgagccaccatgtaagaagtctga
ctaccctgaggctaccatgctgtgaggaagccaagccacatggagaggccatgtgtaggcattctgatca
acagccctagtgtttgagtcatcccagcccaggtgccagacatgtgagtgaagaagccttcagatgattc
cagcccccagccattgagtcacccccagccttcgaatcttcccagctgaggccccagacatcatggagca
gagacaagccatccctactgtgccctgtctgaattcctgacccacagaatctgtgagaangcataataaa
atggttgttttaagccactaagttttggggtgrtttgttacacagcaatagtaactggaaca
>MSTD   Long terminal repeat - a consensus.
tgctatggtttgaatgtgtcccccaaagttcatgtgttggaaacttaatccccaatgcaacagtgttgag
aggtgggrcctaataagaggtgattaggtcatgagggctctgccctcatgaatggattaatgccattatc
acaggaatgggttagttattgtaggagtgggttccttataaaaggatgagtttggccccctcttgctctc
tctctcacactctcttgccctttttctgcctgccttctgccatgggatgatgcagcaagaaggccctnac
cagatgcgccagccccttgatcttggacttcccagcctccagaactgtnagcaaataaatttctgttctt
tataaattacccagtctgtggtattctgttatagcagcacaaaatagactaagaca
>MER104   Non-autonomous DNA transposon - a consensus.
taccatatttcattgaatctaagatgccatcaattgtaagatgcaccattattttatgtaccactaagaa
agaaaaaaatgctgccaattaaactataacatgccattaattgtaagatgcatcccaatttcagagatgt
taaaatgtgaaaaaatgtgcatcttagaatcgatgaaatatggta
>MARNA   Human non-autonomous mariner-like element.
ttatacatccaaatgaatgttntcnttcaaagtagtcaccttgggaaagctatacatttatttttaaccn
awcacaattctgccattgatcaaaacatttttggaacttctcttttggaattgccttcagaaccagttta
tgagccacataagaaaatcagtctcattactttatagtcacacctcatttttgaccaaaaatagtattac
ccagtttgatcacccaccttattcaccagacttggctctgaatgacttttggctgtttccaaaaatcaaa
tccaccctcaaaggataaaganaagatttgccaccattgaggatattcaaaagaatatgctgcaggctct
gaaggcaattccaaaaagaatgttccaaaaatgttttgagcaatggcagcatcattggaataagtgcata
gcttcccaaggtaattattttgaaggggacaactctcatttggatgtataa
>MER104A   Non-autonomous DNA transposon - a consensus.
tatttcattgaatctaagatgccatcgattataagatacaycattattttatgtatcactaagaaaaaaa
aatgctgccaattaaactatgacacaatgcttttcttatcattagaattttwtattttatacttattgaa
agagctcttttagatttatttagacatagatttttatcatatatcactcttgtgcatacataaaaaggaa
aatataagtaaaataaattggttaaggtattcctaaaacttcttcacattcagagtccaactcttctgaa
tcactttctactcagaatcatcratgtccattttcccwsacatcgtattgtcccatcaagagcgttggtg
atgcagcatttcttaaaagagtgctccactattgtctggattttcttccaagccgctgacatccattctg
ccacctgaaggtgtcaatagaarattttcagacaactatgattcatgttccttcctcaaatggtccttaa
atgatttgttgactgaaatatcaagragttgcaattgtccagtcatgccactaggaataaactatgttca
ttcatgtataggcaatgacaactacatcacaactgccgcctggctgacagcaattgtaagatgccatcga
ttgtaagacgcatcccgatttcagagatgttaaatgtgaaaaatgtgtatcttagaatcaatgaaata
>FLA   FLA subfamily - a consensus.
GGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCTACTTGGGAGGCCGAGGCGGGAGGATCACTTGAGC
CCAGGAGTTCGAGACCAGCCTGGGCAACATAGTGAAACCCCGTCTCTACAAAAAAAAAAAAAA
>LINE2   MIR2/LINE2 non-LTR retrotransposon - a consensus.
ccctccgcaagagtaaagagggagccccaaaactcacccctcccnnacccctcagcactcacagcctctc
caccactatctgccttgagaccaccgggactaatctcatcatgccctttatccctgtttatgtcagtcac
cacaagaagcccaagactcccaggtcatccctcaccccccacgcttgaatccccatnaggctctgtacat
ctccttttctgaccccatctcccatccctccccanctcctgaaacccttccactgngccctctggaactc
acggtcmatcatcagcaaaatcccccgtatcctcaacctcttctctgaacgttcccttcaccttcttgct
ctaacngaaacctggctctcccctgaggacactgcttcccctgcagccttctcaagtggtggccgttttc
tctcccacanccctcgtaccactgggcctggaggtggggtaggtgtcctccttgctcctcattgctgctt
ccagaccattctccctccctcctccctaaaacaccccagctttgaatctcatgtcatcagactacatcac
ccgctacccctccttgttgcagtcatctacngacctccgggtcactccccctcattccttgaagatttta
gctcctggctcactgtcactctctccaacactactcctgtcntaattcttggtgatttcaatatccacat
agatgatccttccaataccctggcctctcagttccttgacctcctctcctccaatgatcttgtcctccac
cctacctcagccactcactcccatggtcataccctagaccttgtcattaccaataactgcaacccctcca
taatctcaatttcaagcatcccactctctgaccaccacctcctatctttccagctcactccctctagtac
cctaactccaacaattcttcgaccccaccgggacctccaatccattgatcctaccaccttttcactgtcc
ctcacccccctnatgtcctcacttccctccttacccagcttaaattccatggtcaatcattataatcact
cccttgcatataccctcaactcccttgcccctctctcgcttcgtcntactcgcctggcaaaaccacaacc
ctggttaaatccaactctccgcctactccgcgcctgcacccgtgcagctgaacgtggctggagaaaaaca
cacaaccatgctgactggtctcgctttaaattcatgaccacgaacctcaagtgggcccttaatgctgccc
ggcaatcatactacatttccctagtccattcactctcccactctcctagatnactatttcacaccttctc
ctctctcctcaaacctccaacacctcctcccctatcctcactctcagctgatgaccttgcttcctatttc
actgagaaaatwgaagcaatcagaagagaacttccacanactcccaccaccacatctacccacctacctg
catctgtgcccacatactctgccttccttcctgttactacggatgaactgtccgtgctcctatctaaggc
caacccctccacttgtgcactagatcccatcccctctcgcctactcaaggacatcgctccagcaattctc
ccctctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatacaaacatgctg
ttatttctcccatctttaaaaaacaaaaattctcccttgaccccacttccccctccagctaccgccccat
ttctctgctcccctttacagcaaaactcctcaaaagagttgtctatactcgctgtctccaattcctctcc
tcccattctctcttaaacccactccaatcaggctttcgtccccaccactccaccgaaactgctcttgtca
aggtcaccaatgacctccatgttgctaaatccaatggtcaattctcagtcctcatcttacttgacctatc
agcagcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacacc
acactctcttggttttcctcctacctcactggccgctccttctcagtctcctttgctggttcctcctcat
ctccccgacctctnaacgttggagtgccccagggctcagtccttggacctcttctcttctctatctacac
tcactcccttggtgatctcatccagtctcatggctttaaataccatctatatgctgatgactcccaaatt
tatatctccagcccagacctctcccctgaactccagactcgtatatccaactgcctactcgacatctcca
cttggatgtctaataggcatctcaaacttaacatgtccaaaactgaactcctgatcttccccctcaaacc
tgctcctcccacagtcttccccatctcagttaatggcaactccatccttccagttgctcaggccaaaaac
cttggagtcatccttgactcctctctttctctcacaccccacatccaatccatcagcaaatcctgttggc
tctaccttcaaaatatatccagaatccgaccacttctcaccacctccactgccaccaccctggtccaagc
caccatcatctctcgcctggattactgcaatagcctcctaactggtctccctgcttccacccttgccccc
ctncagtctattctcaacacagcagccagagtgatccttttaaaacataagtcagatcatgtcactcctc
tgctcaaaaccctccagtggcttcccatctcactcagagtaaaagccaaagtccttacagtggcctacaa
ggccctacatgatctggtcccccgttacctctctgacctcatctcctaccactctccccctcgctcactc
cgctccagccacactggcctccttgctgttcctcgaacacgccaggcacgctcctgcctcagggcctttg
cacttgctgttccctctgcctggaacgctcttcccccagatatccacgtggctsgctccytcacctcmtt
caggtctcwgctcaaatgtcacctcctcagagaggccttccctgaccaccctatctaaaatwgcacaccc
tctcccccatcatgcccatctttcttaccccgctttatttttcttcatagcacttatcaccatctgacat
actatatwatttatttgtttgtttgtttattgtctcctccactagaatgtaagctccatgagggcaggga
ctttgtctgttttgttcactgctgtatccccagcgcctagmacagtgcctggcacatagtaggcgctcaa
taaatatttgttgaatgaatgaat
>LINE2B   3'-end of L2 repeat (subfamily b) - a consensus.
tcccccttgctcactctgctccagccacactggcctccttgctgttcctcaaacacgccaggctctttcc
cgcctctgggcctttgcacatgctgttcyctctgcctggaacgcccttccccwctccttcancctggcca
actcctactcgtccttcaggkctcagctcaratgtcacctcctccaggaagccttccctgacttcccagg
ccgagttaggtgccctcctctgggcccccccggtcctaccctgccactctgggttatmattgtctgtkng
cangtctgtctcccccactggactgtgagctccgcgagggcagggactgtgtctgtcttgttcaccactg
tatccccagcgcctagcacagtgcctggcacatagcaggcgctcagtaaatgtttgttgaatgaatgaa
>LTR68   internal sequence belongs to the MER4I-group - a consensus.
tgatatgtaaataaaatttttccaggagccagatagccmcatgtgtctcagattttatgacctaragatg
tctccaaggtctgaggcttcattattctttgaaatgtaaataccyagagagatagctactccagtcttcc
tggcaccttgggaacttaacctagggacctagtccgggctgtaaccatttggccctctaggggagataag
aaagttttattatccttttggatcagagcaattaactagacaaatggctacagatctaattctcatggta
tgtgaagagtaaaatgcttctaggggaagtgaaagcaaacattccctatctttacgtcatatacatttcc
atgtctcaggaggctagggctttttacagaagcactgagaaatccagggaaattttatttccccaca
>HY3   Ro(hY3) pseudogene - a consensus.
tagtcaantgaagcagcgggagtggagaaggaacaaagaaatttgtaactggttgtgatcaattagttgt
aaacancgctgcactccaaccagcc
>HERV3   Partial internal sequence of endogenous retrovirus HERV3.
ctgggtattcgccctatgaaagactgttcggcaagccatccccaatcataagtcaaattaagggtaatct
tcgtgaactaggggaattaactttaaggaggcaaatgcaggctttagggatagccatgtgaagtgtccat
ggctgggtacaggaaagaatgcccataagcctgatagatccaatacacccctttaaacccagggactctc
tttgggtcaaaaaataaaacccaaccactctgggacccatatgggatgggctccatactgtaatcttgtc
tattcccactgttgttaaagttgcaggaattgtgccttggatccatccatccagtcagctgaaaccagca
gcccaggacaagtggaccagccaacaggacctagaccatgcaacccagctgatcctacgatggaaccaag
gtgccagtgagatgacaacagccctgctctggtcactccggaagctgaccagtccacgcacggctgaagc
ttgaggagacaacagccctgctctagtcaccccagaagctgactagtctatgcacggccgaagcttgagt
catcatcagggaagtaaatgtggttagaaatctgaagtccagtaattttccttgtcatattaattacttt
gctattaagctgtcactttgcttagccttctccccccaggaaaaagccttttctgtccatgctgggtatg
aacatgctactcatcactttgttcttgctactccccttatccatgttaaaaggagaaccctgggagggat
gcctccactgcacccacactacgtgtcggggaacatcatgactaaaaccctgttgtatcacacttattat
gagtgtgctgggacctgcctaggaacttgtactcacaaccagacaacctactcagtctgtgacccaggaa
ggggccagccttatgtgtgttatgaccctaagtcttcacctgggatctggtttgaaattcatgtcgggtc
aaaggaaggggatcttctaaaccaaaccaaggtatttccctctggcaaggatgtcgtatccttatacttt
gatgtttgccagatagtatccatgggctcactctttcccgtaatcttcagttccatggagtactatagta
gctgccataaaaataggtatgcacaccctgcttgttccaccgattccccagtaacaacttgctgggactg
cacaacgtggtccactaaccaacaatcactagggccaattatgcttaccaaaataccattagaaccagat
tgtaaaacaagcacttgcaattctgtaaatcttaccatcttagagccagatcagcccatatggacaacag
gtttaaagacaccgctaggggcacgagtcagcgatgaagaaattggcccaggagcctatgtctatctata
tatcataaagaaaactcggacccgctcaacccaacagttgcgagtttttgagtcattctatgagcatgtt
aaccagaaattgcctgagccccctcccttggccagtaatttattcgcccaactggctgaaaacatagcca
gcagcctgcacgttgcttcatgttatgtctgtgggggaatgaacatgggagaccaatggccatgggaagc
aagggaactaatgccccaagataatttcacactaaccgcctcttccctcgaacctgcaccatcaagtcag
agcatctggttcttaaaaacctccattattggaaaattctgtattgctcgctggggaaaggcctttacag
acccagtaggagagttaacttgcctaggacaacaatattacaacgagacactaggaaagactttatggag
gggcaaaagcaataattctgaatcaccacacccaagcccattctctcgtttcccatctttaaaccattct
tggtaccaacttgaagctccaaatacctggcaggcaccctctggcctctactggatctgtgggccacaag
catatcgacaactgccagctaaatggtcaggggcctgtgtactggggacaattaggccgtccttcttcct
aatgcccctaaaacagggagaagccttaggataccccatctatgatgaaactaaaaggaaaagcaaaaga
ggcataactataggagattggaaggacagtgaatggcctcctgaaagaataattcaatattatggcccag
ccacctgggcagaagatggaatgtggggataccgcaccccagtttacatgcttaaccgcattataagatt
gcaggcagtactagaaatcattaccaatgaaactgcaggggccttgaatctgcttgcccagcaagccaca
aaaatgagaaatgtcatttatcaaaatagactggccttagactacctcctagcccaggaagagggagtat
gcggaaagttcagccttactaactgctgcctggaacttgatgacgaaggaaaggttatcaaagaaataac
tgctaaaatccaaaagttagctcacatcccagttcagacttggaaaggatagtctccagattcccttttc
agaggttggttcttatcccttggaggatttaaaaccttagtacaaatagtcctagccatattgggagttt
gccttatactcccttgtctcttacccctcattgtcaaaaatatccaaacagccatagaggctcttgtgga
cagacggactaccacacgactaatggccctaactaagtattaacccctgccaagaaaagagctacttcct
cttgaagtaaatgaagatagtgatgctttctcttaaactttacttataaaaagcatcaaaggggggaat
>LTR16C   Primate LTR16C repetitive element - a consensus.
tgcctgaggrctttctctggccastgaagccagmtttgtcngcccacgtggcaagccggaaatgctgggg
agttaacaccccttggaagcagccctcaaccaatgasagatggggagttggtggataaataccccagctt
cctcacccctcagkgggataactctgaggtatgtgttctacactgtctcccagagtttcccagyrggayt
gagccccagttgcccacagtggtaacttgmtaatatacaytttattggcttccttctctttcctgtctca
cttccccacttccctacyagtgtttcctgggatcacctcccaaataaactacttgcactcaaatccttgt
ctcagggtctgcttctgggggaacccaaactaagaca
>LOR1I   Primate LOR1I repetitive element - a consensus.
gattttggttccctgaccgggaacgcattgctcgtggctcggctgctgtgggccgggagtttcagaagcc
ctcctaagcagctgcccatcccatttttggccggaggtgagtttctgtttctctttggccccgccgctgc
cagccccaacagtgttcctgattgcctaggaagaacagtctttgaaatttgacatctgcgtctagatgga
tgagtgtcttttgtgggtaccagacagcgggatctgctcctctcaatttgggaaattctgaaggaatttc
cgtttgcaggttgaacaagcccaaccgactgagagaggaagcaccccgactgtttcagtttggacactct
tggggcttgtttgttgctgcagcagttggattgcgttttggtgattgtgtgcgtgtgtgtgtgtgtgtgt
gtcaatatagtcacgggaaattagaatttgataaacggatattcttttataatactgtttggccccacta
t
>HERV49I   portion - a consensus sequence. 
[encoded data, 6248 characters]
tkactttaatatgtgaaactttcnaaagtttcaaattggggac
>MER84I   Primate MER84      repetitive element - a consensus
tcttggtggcttgcatgggtactttactggaatttctcccttcctttttctccctgcttccctcaatgct
ctgcttccttacccctgggaactcaaggtccctggctgaagcagctcttcagtgggattctgaagcccta
gagaagagatagctgtctgtcatttcccttaggggtgagggaatggccaggattcctttctatttcttgt
actgccagtgaaccaatttaagtcctctttggcaattgacagtttctgtcaaggactgtttcttggtgtt
acccgaagcctaagacaaaagggttaattcattattgcccatcagggtggcaagtctattttcactttaa
cactcaataaacctgtgtgcacagacacactctactggttgcgaacccaattttggattcaactttgtca
caaacaccacatcccaagttacaagtgagttctcctttacattaggtttgaattgacccctcgagcaagg
gcattcctggaatggtcatccaggcaaaggcagaccctctatctgtggtggagtccccccaaatagagtg
agccaaagggaaaagagaggtccaaaatgcctcagggatcttgtagctccttatctaaaccctttacata
ccatgaaatcacactatgagaaattaccacctcccttgaaataaccttagcaaaaactggctcaagtgta
tcaaagctaaagaaatctttagactcacttgcaggaatagtttttgattatagatgagcactaaattatc
tcctagctgaacaaggagtctgtgctgtcatcaataaaacctattgcacctatgttaatgtgtctggaga
agtagaaaccaatgtctgagaaattttcaaacaagccaaatagctacacacactttttcaaagtaaccaa
gactggaccaaagcctttatcgattggtttctaaaaatcactcggcttctcccattccttggacctttat
tcctcttcattcttcttttaatgtttggtccctgcatttttaatgctctcattaactttatatctttcag
attacaaaaattctaccacaagtgattatgcaatcacaataccagcctgcaacagcaacttccatttata
tgaggcctcttgatggaatccggtcttactctcatgagcaagtttttcatgaccttccattgccttcatg
acagagtaagaaggggaaaaatgcaacttatcccctccacacccacattcagcaaaaatagccagacttg
atgcccctcttcactgtgctgttttccatttcttgagaccctagtaggcagcaggtagacatgagcatgg
aggaatataaagggtagaaactttaaacaaaatatttttcagggggaaaa
>L1MC5   3'-end of L1 repeat (subfamily L1MC5) - a consensus.
aaaaaaaaaayacatttctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatga
gtaccctyaggacccagattgtggtctctaaataccatttcccactaaaaggaaccagggctccttggag
aaatggctaattccaggtctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagata
gcaaggaagctataaaactactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgg
gacaatttgagcatcaataataactgcaatttaacacatcaaatatrtttaaatccatgagtttataata
aaaaaatctaattggtcacctttggagtgatgctagggaaccaactcattattttgaaaactggtaaata
aagggaaagaatcaagcatttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwga
tgagggaaatttctctttatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcac
cattttgcaacccctaatgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaac
tarasatytgcctcctgatggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatca
aacctgaatctgatcaagcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatg
ttaaatgacaccatrgggatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaac
ttttcttcaacaaataaattatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaa
agacatatcaaccaattacaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaa
atatatrtgtatacaattggaaatttgaacactgactagatatttgatgatattaaggaattattgttat
ttttaggtgtgataatggtattatagttattttataaaatagtccttatcttttagagatacatactgaa
atatttatagataaaatkatatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtg
gagctatagatgaaacaaaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagt
tcattatactattctctctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgt
tggacattaatttgttggcaa
>L1PBA_5   Primate L1PBA_5 LINE1 repetitive element - a consensus.
ggaaaatggyggataggaggcaggactaacttgcagctcccacttggatggacagaacagyrtgtggaga
ctcacaycatgaacttttgctccaagaactaccacaggaacataccaggaaaaccaaaagaattcacaga
ccctttgaaagaagtggcttgctrctgcaaactccatgagacagccraaaaactgtgagtgcccaaagtg
tgagagggggaaagggggaaagtctgcctctgaacacacatcctcactggggaacctgaaaatccagatc
acaggagaaggatttaaccttacctrgagctgaaatgaatttagagagccnagtgaaatataaaagtaga
agaagcagtgggaagagccctgtaggcactcccagtccccagctcaagcccagggaagccatttctgact
ttatctcacaggggtccttggggagggctgccagtggaattggggaargaccacagggagaaggaaactt
ccagctgaactttgtaataatttygacygarcaygaattttcctggrcagaatccgggggatgaatggga
agtgctgcagataygagcacagaagccgcagctgatggtgtgggcaggcggggaggggcgangcctgaaa
gccctgcttgctttctcagyggggaggcttgtagcctggggcaagttctcagccctgctcaccggctgcc
tggaaataaacttggtgctgttgggggggcacagtgggagtgagactggccttgctggctgcatgggagc
tgggtgaggcctgtcactgctggctttcccccacttccctggtgacctgtatgacgcagcagcagaggca
gccataatccccctgggaacataactccattggcctgagaaccacacccccatcccccacagcagccaca
gcaagcccygcccaaggagagtctgagctcagacaygcctaaccctgcccccacctgatggtctttctct
accyaccctggtagcygaagacaaargacataatctcttgggagctctatggccctgcccaccacctgag
aaacctgaatacttatccaggtgaccctagggcaagcttgtatcctccctatactaccacagctgatgct
ctcttgaaagngccacctcctggctggaggccaaccaactcaagccattacagcaactcataacagaaca
accctgctccaaggaaggagaaaacaacagctaattccactgcctgcaacatcctggctaaccagaggtc
ctgagtctgtccacgtgacaacttcactgctagcataaccagcattcaagaaaaccagcacactaaacaa
aactacaaccaaggaccctcacagagtccacttcactcccctgctacctccaccagagcaggtgctggta
tccatggctgagagacctgaagatggatcacatcacaggactctttgcagacactccccagtaccagccc
agagcctagtagctccactgggtggctagacccagaagagcaataacaatcactgcagtttrgctctcag
gaagccccatccctaggggaagggggagagcaccacatcaagggagcaccccatgggacaaaagaatctg
aacagcagcccttgagtcccagatcttccctctgacatagtctacccaaatgagaaggaaccagaaaaac
aattctggtaatatgacaaaacaaggttctttaacacccccaaaagatcacactagctcaccagcaatgg
atccaaaccaagaagaaatctctgaattgccagaaaaagaattcagaaggttgattattaagctactcaa
ggaggcaccagagaaaggtgaaaaccaacttaaagaaattaaaaaaaatgatacaggatatgratggaaa
aatctccagagaaatagatancataaataaaaaacaaactaatcacaacttctggaaatgaargacacac
ttagagaaatgcaaaatgcactggaaagtytcagcaatagaatcgaacaagtagaagaaagaacttcaga
gctcaaagacaaggctttcraattaacccaatccaacaaagacaaagaaaaaagaattttaaaaaaatga
acaaagcctccaagaagtttgggattatgttaaatgaccaaacctaagaataattggtgttcctgaggaa
gaagagaaatctaaaagtttggaaaacatatttgagggaataatygaggaaaacttccctggccttgcta
gagatctagacatccaaatacaagaagctcaaagagctcaaagaacacctgggaaattcatcacaaaaag
atcatcacctaggcacatagtcatcaggttatctaaagtcaagatcaagacraaggaaagaatcttaaga
gctgtgaggcaaaagcatcaggtaacctataaaggaaaacctatcagattaacagcagatttctcagcag
aaaccctacaagctagaagggattggggtcctatctttagcctccttaaacaaaacaattatcagccaag
aattttgtatccagcraaactaagccttcataaatgaaggaaagatacagtctttttcagacaaacaaat
gctgagagaattyrccactaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaaca
aatcctcaaaatacaccaaaatagaacctccttaaagcataaatctcacaggacctataaaacaataaca
caatgaaaaaaaaaaaaacaacaacaaaacaaacacacacacacaacaaacaaaaacaaacaaacaaaca
aggtattcaggcaacaamtagcatgatgaatagaatagtacctcacatctcaatactaacattgaatgta
aatggcctaaatgctccacttaaaagatacagaatggcagaatggataagaattcaccaaccaagtatct
gctgtcttcaagagactcacctaacacataa
>L1M2_5B   Primate L1M2_5B LINE1 repetitive element - a consensus.
tagaggcatctggcactcacctcctccacaaagaaggaccaaaatagcaagtagataatcacattttaaa
tagagcatctaagagagaacactggaattcagcagagaagtgacaggaaacatctgaggcatggaaggag
agggaagyaaagcagccagcccagccaggattggctcagagccaggagaggctccccagtgtggggaaag
ggtaagtgagagatccccagyrgtccacattcccaccacrgactcctgcaatcctagccacrggagagcc
cctcancccttncaggccctgagactagtatagggagctgcctggagtccatgtaatagcattgttccag
agagggagttcacactgggtcccacacaccccctgagacccaagcagctgcagcatggnaccattttgag
agccyagcccccaccagactacatcctgccctggggcccaatagcccctgcatctccacatccctggagc
cccactgacattcccccacatccacccaggagggctgcagtgttacaataccagctggacccagcagtgc
agcagggtccccagcactctagcccacacagtgtcctacaccccagggaataggcagtgcagtacaccag
ggaggctgcccctcnaccccccgccccccgccygacctaggacaaagggagccaaagggagccaaagcat
gcactccccagagcctgagagctgcctgcctggggctgctgccactgacagcaaccctgccccctccagc
agcagggctgctgtacacctgcatgtaccctgaggacaggctctccctacctactgctgctgccagtgca
aagtgtatgctccccagagcctgaggaccacctgcctggggctgctgccactgacagcaaccctgcccca
actctggccccagcagcagctgctgtacacntgcacgggccctgaggacaggctttccctacccactgcc
actacnyctgactctggggccaaagcacatgctccccagagcctgagagctgcctgcctgggctgctgcc
actgacagcaaccctgcccccacccccagcagcagggctgctgtgcacctgcatgcaccctgaggacagn
ctgcccttcccaccactgctgctgccacccngacccaagcactgccatccaggggcctgaggatcggcct
gccccacccaccacagccagtgcccatgtgcaccaccaggggggcctgaggacaggcctacccggcctgc
caccaccaccagtgcctgagcatgccatccaggggcctgaggattgccctgccccacccaccaccactgg
yrcccatgcacaccacccaggggcctgaggacaggcccacccagcctgctgccaccactaccactggcac
ccacctgcacatgccacctgggggcctggggactggcccgcccagcccaccacagccactgctagcacca
atatgtgccacttaggggcctgaggattggcccaccactgctactgccactgcccatgctatgcatacta
cccaggggcccgaggacctgcccacccagctggcctactactgccactgctagcacccaagcaagccacc
tggaggcctaagaactggcccgcctagacccgccaccaccagtgcccatgcatgccacctaggggcctaa
ggacaggcatgcctagcccaccactgccaccactggggcccaaggactggcccacctggtgtccctatcc
ccagcaaagccttnccacagcctccactaacaactacagcctaagccactgaggaamtcacagacaccac
tgatactgattnacagctgaagaaatcatatggagactacactactgcatccacccagaatcaaagccaa
agtaccctacccaaccaacactatagatacatctacaggaaaaaagtctttccctatgaaagccaathca
taaaattggaagaagtaactgttacaccagatghacagatatcaatgtaagganacaanangacacaaga
aacatgaaaaagcaaggaaayatgacayctccaaaggaacacaataattctccagtaacagattccaatg
aaaaaratatgaaatgcctgaaaaagaattcaaaataatgatattaaagaaactyagtgagatacaagag
aacacagataatacaaagaaatcagwaaaaaaacaattcakgatatgaatgagaaattcamcaaagagat
agatatcataaaaaagaaccaaacagaaatcctggaactgaagaattcaatgaatgaaataaaaanacat
atacaattgagagcttcaaaacaatagactagatcaagcagaagaaagaattttagaacttgaagayagg
tctttwgaaataacccagtcagacaaaaaagaaaaagaatttaaaaaataaacaaagcctaygtgacata
tgggacaccataaagtgancaaatatttaaattttgggtrttccagaaaaagaagagatggtcaaaggga
tagaaaacctatttaatgaaatwatagctgaaaamttcccaagtctwrcaagagatttagacatcnagat
ataggaagctcagaratccccaaatagatwcaanncaaaaaggtcttcttcaaggcacattatagtcaaa
ctgycraaagtcaaagacaaagagagaattctaaaancagcaagagaaaagtatcaagtcacwtataagg
raatccycatcagamyaacagtrgatttctcagcagaaaccttacaggccaggagagaatgggatgayat
attcaaagtgctgaaagaaanaaaagytgccaaccaagratactatacccagcaaagttatccttcataa
aaggagaaataaagtatttcycagayaagcaaaagctgagggaattcatcaccactagrccngccctaca
agaaatrcttaagggagtyytacayctggaagcaaaaggacaagtatctaccatcatgaaaacacatgaa
agtataaaactcactggtagadcagacacacaaatgagaaagagaaaggattcaaatgttahcactahag
aaaaccaccaaatcanaatgangaanaataaragagaaagtatanacaaaacaatnatanacaaaacaac
cagaaaacaattaacaaaatgacaggaataagtcctcacatatcaataataatcttnaatgtaaatggat
taanntttccacttaaaagatatagactgnct
>L1MCA_5   Primate L1MCA_5 LINE1 repetitive element - a consensus.
tttaaaaaaatanantaaagacttctggtttccggtccggcatgtaaggagcttggaagtcgccactcca
tcctaacaacaagtaaaaagctgaacaaactgaaaaatcaacaactcttcttagatccataagagaagtg
aggtcacagggcaaaccactgcccccaaaattggagagacagacaggcggatacagagaatcacaactta
ccggagcagaaacccacgagcagaaacctccatgggaaccagtgccggggtaggaaaacctgaactgtaa
ttgacgaattgctggaggctcagtgtggacaagtctgagagttaaaaactccaggggnacccagtcatna
gggggcccccacacttttgtgagttttacctccaggagctcgaccaggttctcacagtgaatatcggaga
aaaatcccctcgtgcttccggcagggggaggggaaaaggaaccattttgaaatacgccagagcattctgt
tcttcttaacaaggcctgccctcaggagaaactatttaaccagagcctaacctgctggggttttatcaga
gcctaactgacctgggggaagggaaatacccaactccagcccnctctagccatcctgtcccacctaaggt
ggggaggagaaactgagaagcacttgtgaagttcacagtccagaggcacaggctcactaaaagactgaga
cctaatcataggactatagaacgcttcccctccccccacaccttaccaccacattactaaaggcctattt
acagcagttccttttacccagtacatcatgtccggctatcaagaaaaaattacaaggcatactaaaaggc
aaaaaacacagtttgaagagacagagcaagcatcagaaccagactcagatatggcagggatgttggaatt
atcagaccgggaatttaaaacaactatgattaatatgctaagggctctaatgganaaagtagacagcatg
caagaacagatgggcaatgtaagcagagagatggaaattctaagaaagaaccaaaaagaaatgctagaga
tcaaaaacactgtaacagaaatgaagaatgcctttgatgggcttattagtagactggacacggctgagga
aagaatctctgagcttgaggatatgtcaatagaaacctccaaaactgaaaagcaaagagaaaaaagactg
aaaaaaaacagaacagaatatccaagaactgtgggacaactacaaaaggtgtaacatacgcgtaatggga
ataccagaaggagaagaaagagagaaaggaacagaagaaatatttgaagcaataatgactgagaatttcc
cccaaattaatgtcagacaccaaaccacagatccaggaagctcagagaacaccaagcaggataaatgcca
aaaaaaaaacaaaacaaaactacacctaggcatatcatattcaaactacagaaaatcaaagataaagaaa
aaatcctgaaagaagccagagggaaaaacaccttacctatagaggagcaaagataagaattacatccgac
ttctcctcagaaaccatgcaagcaagaagagagtggagtgaaatatttaaagtgttgagagaaaaaaann
ccaccaacctagaattctgtaccctgcgaaattatccttcaaaagtgaaggagaaataaagactttctca
gacaaaaattaaaaaaaaccccaccaacctagaattctgtaccctgtgaaattatccttcaaaagtgaag
gagaaataaagactttctcaaacaaaaattgagggaatttgttgccagtagacctgccttgcaagaaatg
ttaaaagaagttcttcagagagaaggaaaatgatataggtcagaaacttagatctacataaagaaaggaa
gagcattagagaaggaataagtgaaggtaaaataaaaacttttatttttcttattcttaattgatctaac
agataacagtttgttcaaaataataatagcaacaatgtatttaattatgtatgcttatgtatatatgtgt
gatatatatatatgcttatatatgcttatgtataagtgaaatgaatgacagcaatgatacaagggatagg
agggaggaattaggattattttgttattataaggtacttgcactacctrtgaagtggtatagtgttattt
gaaagtggacttggattagttgtaaatgtatattgcaaactctagggcaaccactaaaaaaagttaaaaa
aaaaaaaagaagtataactgatatgctaagaaaggagagaaaatggaatcatataaaatgctcaattaaa
accacaaaaggcagaaaaagagtggaagacaaaaataggaacaaagaacaagggcaacaaatagaaaaca
gtaacaaatatggtagatattaatccaactatatcaataatcactttaaatatcaatggtctaaatanac
caattaaaagacagagattgtcagagtgg
>L1MA8   3'-end of L1 repeat (subfamily L1MA8) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaatagcaagaaaacaaataacccgattaaaaaat
gggcaaaggacctgaatagacatttctcaaaagaagacatacaaatggccaacaggtatatgaaaaaatg
ctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacgaaagataacaagtgttggwgaggatgtggagaaaagggaacccttgcac
actgttggtgggaatgtaaattagtacagccattatggaaaacagtatggaggttcctcaaaaaattaaa
aatagaactaccatatgatccagcaatcccactwctgggtatatatccaaaggaaatgaaatcagtatgt
caaagagatatctgcactcccatgttcattgcagcattattcacaatagccaagatatggaatcaaccta
agtgtccatcaacggatgaatggataaagaaaatgtggtacatatacacaatggaatactattcagcctt
aaaaaagaaggaaatcctgtcatttgcgacaacatggatgaacctggaggacattatgttaagtgaaata
agccaggcacagaaagacaaataccgcatgatctcacttatatgtggaatctaaaaaagttgaactcata
gaagcagagagtagaatggtggttaccaggggctggggagtgggaggattggggagatgttggtcaaagg
atacaaaatttcagttagacaggaggaataagttcaagagatctattgtacaacatggtgactatagtta
ataacaatgtattgtatacttgaaaattgctaagagagtagattttaagtgttctcaccacaaaaaaatg
ataagtatgtgaggtaatgcatatgttaattagcttgatttagccattccacaatgtatacatatwtcaa
aacatcatgttgtacaccataaatatatacaatttttatttgtcaattwaaaaaaaaa
>LTR7   LTR from human endogenous retrovirus RTVL-H2.
tgtcaggcctctgagcccaagctaagccatcacatcccctgtgactagcacatatacgctcagatggcct
gaagtaactgaagaatcacaaagaagtgaaaatgccctgccccaccttaactgatgacattccaccacaa
aagaagtgaaaatggccggtccttgccttaagtgatgacattaccttgtaagagtccttttcctggctca
tcctagctcaaaaatctcccctactgagcaccctgcgacccccactcctacccgccaaagaacaaccccc
ctttgactgtaattgtcctttacctacccaaatcctataaaacagccccacccctatctccctttgctga
ctctcttttcggactcagcccgcctgcacccaggtgattaaaagctttattgctcacacaaagcctgttt
ggtggtctcttcacacggacgcgcatgaaa
>MER72   MER4I-group.
atgaagacagcgtwctcttnngnattancatgataaataaaaatraaatcctaaracccccaaccgactg
arcagaccacctcttggccgaggggaccccagagwaaccttgaaarctgagttcycggccgkgacgggat
ggagggrtcagacacacctcgttrtacccctcccttrctaaccatsaykrggcttgcytccctaargrct
aaacagaaaccagcyctttcgaaagactccagcactgrnnnnnnntcctttccttcctgrtaagagacca
ccraccacggagwgkttctggccagtctncggaggatgtrcagcgagggttttcgtgtcctctgcttcac
cttttgacgtcagagggccgaaaactccaccctcngatcatgctaacactgccaktttttgwacatgggw
cccatgaagaggcaggaarctcaattgtgcacgcgtgtgtttctccyttcacgnatattcatgactcctc
ctatagcttattgaatatgtatatttggccatyccactcagcataaattcctgttccctttgccyctccc
tcgaaatgtctgtttctggcttctggccggaggctacgcttcccagcctgtcagaatggccgccctgcag
gctgcaaccctttatgagaaataaagctctcctttccaaatttgaacctcntcattcttcagttgacaaa
gtrkcaaarat
>CER   Human D22Z3 repetitive DNA (centromeric DNA).
ctgcagaacactacttccagggtctaaatgtctgtccttcacataggattccagaacactgctacgagag
tgtgaatgtttgtccttcacatagcatttcacaactgccatggtctgaatggttgtccctcacatagtat
tccagaacactgctatgagggtctgaatgtttgtacctcacataggattccagaacactgctatgagggt
ctgaatgtttgtacctcacataggattccagaacactgctatgagtgtttgaaagtttgtccctcacata
ggattccagaagactgctgctggggtctgaatgtctgtccctcacatcggattccagaaccctgctgctg
gggtttgaatgtctgtccctcacatagaattc
>LTR71A   Long terminal repeat of HERVI-like retrovirus.
tgtcccctaggcctagaatttctgtttcccatttttggtcagtctctgtgtctgagcttttccctgtgta
ctcarcccccatactggaggtttcttgcacacccmgagaatcacttcatccatctcyggccrtttccctc
acgggagaacrgaaccacggattgggactcyrcactcgcttcrtatctaggatacatctcagtcacacac
actcaacctcygaaaatgcccaaccaccaaggcagtacttayagtccaattttcctaccttggcttntgc
acgaggttgcctggttgctgcagtgcctgcttttctccctgtgtcacctccgctgcctcctgaataacag
tctcgggtttgtctatggcctctgcagggagccaggatgcctggacagagcaggccacctaaatcaggtg
ggacgtatctcccctctcrgctggagtcccactccacgcaggcacagagatcccagatgggcccccaggt
ttgtgagaaacacacattcacccatccaaacccaaagaatggactcagagacacgaagaacagtggaagc
gagacttttaatggtggtcttgcaagatcaggtgtctggtaggcaggcacacccggggcagttacagcag
gtaatttatctcctagcatrcaagtccytcccccagttcctcattggtygagtactatggggttacaatc
ttcctrrayatcgcctaagtttcattatcccccttataaggttataccctggtccccttccctgcttaag
tttcaatttcccaataacaaaactttcttcccttttatgggctgacccctcctctacattctgttcactt
atbgtgaccttctaggtgcatgaghcatgcagtttgtcacattcgcaggctggctgccagtacttagatt
tatcatgccttgaaaatggacca
>LTR71B   Long terminal repeat of HERVI-like retrovirus.
tgtgagaaacamactcacccgtccaaacccaaagaatggactcagagacacgragaacagcgaaagtgag
acttttaatgacggtcttgcaagatcgggtgtctggtaggcaggcacacccagcacagttwcaacaagca
atttatcccctagtgygcargtccctcccccagttcctcataggctgagtactatggggttacaatcttc
ccnggacgtcgcctattggttgttgggtaggggctttaggtgttttctttagggttgtcttggctgcatt
ttgttgcagcccacaatgcattgcaatcctagttagctcaggggctcttcaagtatttgacttatgacct
aagtagctgggcaggctgataagaacagacaaagtgagctattttgcaggctagtaaactttcatcttag
actaaacttctttggtttgggtgagggcaactaagtgggggggaagggggggccgacaagcaggcattgg
ctatccaagcaggggcctagtattatcctgtttcttctgtagtttgctgacctaagccrattcaaggcac
tttgtcttggaaatggaccactgtatacattatttccttca
>L1PA8A   3'-end of L1 repeat (subfamily L1PA8A) - a consensus.
ctaatatccagaatttacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcaaaggatatgaacagacacttctcaaaagaagacatttatgcggccaacaaacatatgaaaaaaag
ctcaacatcactgatcatcagagaaatgcaaatcaaaaccacaatgagataccatctcacgccagtcaga
atggcgattattaaaaagtcaggaaacaatagatgctggcgaggctgtggagaaataggaatgcttttac
actgttggtgggaatgtaaattagttcaaccattgtggaagacagtatggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgggtatatacccaaaggaatataaatcattctac
tataaagacacatgcacacgtatgtttattgcagcactatttacaatagcaaagacatggaaccaaccca
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaggaatgagatcatgtcctttgcagggacatggatgaagctggaagccatcatcctcagcaaacta
acacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgaacaatgagaacacatg
gacacagagaggggaacaacacacaccagggcctgttggggggtggggggtgaggggagggaacttagag
gatgggtcaataggtgcagcaaaccaccatggcacacgtatacctatgtaacaaacctgcacgttctgca
catgtatcccgkwwsttagaagaaatwaagaaaaaaaa
>L1P3B_5   Primate L1P3B subfamily 5' end - a consensus.
ggggtggggccaagatggctgactagaagcagcwgcgatcggaggctcccatggaaaagaaccaaaacag
tgtgtaaatcctgcaccagcaactgaggtatccaggttctctcatcaggactgactaggcagctggcatg
acccatggagaggaaggaagagcagtgtggtgtggcggcccacctgagagccacacggggcaggggagcc
cccaccccccagccaagggaggcagtgagtgagcatgctacccagcctgggaaaccgtgctttttccacg
gaactgtgcaacccatggatcrgaagatcccactcrtgaacccacrccaccagggcctagsgtcccaacc
ccggagctgtgcagattctcaacagcctctcagctggaatctgcttaagcctaccgagctcccgggggga
ggggcgaccagcaccacagctgcagctgcctgctgtctaagccatttgagctccttgggggaggggcagc
agccagcactgggactcacaactgcctaacacnctaagctccctgggcaggggaagggcagcatccatct
ctatagctccaggctgtgcttttcccctgctggagccagggaggctggatggcttggtcccaagacntgt
ccccacagcccaacacacyggctgtggcagactgcrgccagagtgcctcttcaggcctgactgaccctga
cccatccttcctncctcactgggtggggcytccctgcaggaactccaataactccagccagaggctcagg
gacagaactctgatctccctgggcctgagcccctagggggaggggtggccacagtctctgyggaccagca
gacttagcctttcctcctggtagttctgaggaatccaggcagcccagatgagtgggtttccccccgaagc
gaagcacaccccctccaccaagggacagtcaaagtgcttcattaaatgggtcctgttccccatgccaccc
aactgggtgagaccctccaacaggggttgtcagacaccctatacaggagcaatcctactggcatcaggtt
ggtgcccctcgaggtcagagatcccagaagaaggagcaggcacccatctttgctgttctccagcctcctt
gagtgacatctccaggcaygggagcgaaycagatgaatagggcctgaagtgaacccccagcaaactgcag
cagccctacagaagagggacctgaccattgaaagaaaaacaaacaaacagaaagcaacaacaacagcatc
aacaacaacaacaaaaaagcccccacaaaaaccccatccaagggtcagcagcctcaaagaycgaaactag
acaaactcatgaagatgagaaagaatcaatgaaaaaatgctgaaaacccaaaaggccagagtgcctcttc
tcctccaaatgattgcaacatctctccatcaagggcacagaactggacggaggatsagatggacgaattg
acagaagtaggcttcagaaggtgggtaataahaaactctgctgagctaaaggagcatgttctaacccaat
gcaaagaagctaagaaccttgataaaaggttagaggagctgctaactagaataaccagtttagagaggaa
cataaatgacct
>HERV70_I   Human mosaic endogenous retrovirus - a consensus.
[encoded data, 7597 characters]
cactgctttaaaatgtaaatagccaaaaagatagaaccctattcaaccatttt
>L1M2_5   Primate L1M2_5 LINE1 repetitive element - a consensus.
aggaggggcttcaagatggctgactagaggcatctggtactcgcctcctccacaaagaagaaccaaaata
gcgagtagataatcacactttgaatagatcatctaagagagaacactggaattcaacagagaagtgacag
gaaacacctaaagcaaggaaggagagggaagcgaggcagcctgctcggccgggatcggctgggagcctgg
agaggctccccaatgcggggaaagggtaagtgagagacccccagcggtccacattcccaccacggactcc
tgcaatcctagccacgggagagcccctcgaccctcgcgggccctgagactaacatagggagctgcctgga
gaccgcgcgatggcattgctccagagagggagctcacgctgggtcccacacacccccgagtcctaagcag
ctgcagcanggcgccattttgagagcccagcccccaccagactgcatcctgccctggggcccaacagccc
ctgcatctccacatccctggagccccantgacattccccgcccacagccaccgccactgctggctgctgc
caccagggccgaagcacgagccactggcagcgaccccgctgcccccagcagcggggcngccacgcatttt
cacgcgccctgaggacaaactcccctgcctgcagctgccaccactgcgggctgccgcggggccgaggcac
gagcaaagcgcacgctccccagccgcctgcctatggctgctgccactgaaagcaaccccgccctccccag
tagcagggccgcagcgcagccgctgctgcccccacccgagcattccaccaggggcctggggatcaccccg
cccctgcctaccacagccagcgcctgcacgcaccaccggggggcctgaggacaggtccgcccggcccggc
tccgccccccccagtgcccaagcacgccgtccaggggcctggggatcgcccagcccagtccaccaccgtt
ggcacctgagcactcctcccgggggcctgaggtcgggcccacccaacctgccactaccaccacagctggc
acccacccgcatgcgccacctgcgggcctggggactggcctgcccagcccgtcgcagccaccgccaacac
cagcgcggaccgcttgggagccagagggttgtcccaccactgctactgccatcgcccatgccacgcccgc
tgcccaggggcccgagaacctgcccacccacccggcccaccgctgccactnctggcacccgagcaagcca
cctggaggcccaagaatcggcctgcctggacccgctaacaccggtgccagcgtacgccgccctggggccc
aaggacaggcacgctcggcccaccgctgccaccactggggcccgaggactggcccacctggcatcccngt
ccccagcaaaacttcaccacagcctccactaacaaccgcaccctaagccactgaggaaatcacagacacc
actgatgctgtttacagccgaagaaatcatacagagactacactactgcacgcacccagaatcaaagcca
aagtgccctacccaaccaacaccatagatacatcttcaggaaaaagtcctcccctacgaaagcaaattca
aaaaattggaagaagcgactgttacaccagatgcgcagatatcaatgtaaggacacaagaaacatgaaaa
agcaaggaaatatgacacctccaaaggaacacaataattctccagcaacagattccaatgaaaaagaaat
ttatgaaatcccagaaaaagaattcaaaataatgatattaaagaagctcagtgagatacaagagaacaca
gaaaaacaatacaaagaaatcagaaaaacaattcaggatatgaatgagaaatttaccaaagagatagata
tcataaaaaagaaccaaacagaaatcctggaactgaagaattcantgaatgaaataaaaaatacattcga
aagcttcaacaatagactagatcaagcagaagaaagaatttcagaacttgaagacaggtcttttgaaata
acccagtcagacaaaaataaaaaaaaaagaataaaaaagaatgaacaaagcctacgtgacatatgggaca
ccataaagcgaccaaatattcgaattttgggtgttccagaaggcgaagagaaggcnaaaggcatagaaaa
cctatttaacgaaataatagctgaaaacttcccaagtctagcaagagatttagacatccagatacaggaa
gctcagagatccccaaatagatacaacccaaaaaggtcttctccanggcacattatagtcaaactgtcaa
aagtcaaagacaaagagagaattctaaaaacagcaagagaaaagcatctagtcacntataagggaacccc
catcagactaacagcggatttctcagcagaaaccttacaggccaggagagaatgggatgatatattcaaa
gtgctgaaagaaaaaaaaaactgccagccaagaatactatacccagcaaagttatccttcataaatgaag
gagaaataaagtctttcccagacaagcaaaagctgagggaattcatcaccactagaccggccctacaaga
aatgcttaagggagtcctacacctggaagcgaaaggacgatatctaccatcatgaaaacacacgaaagta
taaaactcactggtagagcaaacacacaaatgaggaagagaaaggactcaaatgttaccactacagaaaa
ccaccaaaccacaatgataaacaataagagagaaagaaaggaacaaaggatatacaaaacaaccagaaaa
caattaacaaaatgacaggaataagtcctcacatatcaataataaccttgaatgtaaacggattaaactt
tccacttaaaagatatagactggctgaatggatt
>MLT1A   Mammalian long terminal repeat (MLT1A subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>L1PA17_5   Primate L1PA17_5 repetitive element- a consensus.
gagtnctgggagccttgnatcccnnngcatnntggcachagcagctgcatctccagcaatgggggaggcc
aggctcccttgcatgcccgcaggahaggggchgaatcccatggggctgagcagcagatgahcagcaggct
tcacctgbactgcacctcactgggtgggatctcctaactggggtctctagygcagccaccccagccctgc
cggtgttttcgggctggcaacaggtctatacctccctgggatggagctcccagagggagngggcaggcca
ccatctttgctgttttrcagccttcactgttgataccttcaggtactggaaaatccaaggtgactaggga
ctggagtggacccccagcatactgcagcagccctatggaaaagtggccagactgtttgttatgtgggtcc
ctgatccyatatactcctcactgggcaggtcctcctggcctgggtctccagccaccccctgctggggcta
tcgagccagtagcagctctgcaactccctgggacagagctcccagtgggaggggntgggttgccatcttt
gctgtcttgcagccctyatcctttgcccttgctgtctccaggctctggagagtctgtggggaccaggggc
tggtccggacccccagcacagagcaaccacctcacrgaaaagtggccagactgttctccatgcagatcct
ggtcctcacttctcctcactgggcagggccgcccgacctgggactccagcacaaccaccctgcccccacc
tgaycacttcaatcagaggcagcccagcatttctccgaggaggaaatcccagagtcaacccacaacccct
ctgccactgcagttgcagtggtaccgccctaacagcccttgggctggggaaggaacaaagggcctragtc
attatrctggcacctccagcacaccacagccaccatacagagaggagtccagcccctcttccctgggaac
ccccanccccccactcttcaccamksggcagggcccctggctcatgactgcagaacagtcgccccaccca
ctggctgagcatacccactggtagtggctctgagtttccctgggaagaggctcccagaggcaaccaacag
cccctctgccactgccacagcagcagttctgtccctgctgccctcagtctggggaagaaacaaagagcct
garggctacacctaagcttacagcatgccacagtcaccatatggagaggagaccagtctctcctccctgt
gagcccttgaccccctgctcctcaacaagtggagccccgtcaagctcatngccagcagtgcagctgccac
ccccctggctagaacactyccagtaacagcagctctgcatttctccrtggaggtggagctcccaggggca
actgaaagcccctctgccactgcctctgcagtggtactncccntgctaccctcagactaacgaaggagca
aagaccctaagtgcnttayccacacctccagcaagctgcagtngacctaaggagaagaggccagtctgtc
tcccccatgggtcccacccaccacccctgctcatcaccaggcagggaacccctagcttgggcccacagca
cagacaccccatcccccaggctgattgcactgaktrattgcagccctgcatctctctggggtggagcncc
caggagacaagtgaaagrccctctgccacaaccactgcyaaggtcccttcccctgctgcctccaagttgg
ggagggaacataaaccctgagatcaccccagagctgcggtgtncagcctgggagtgccaagccragatct
gcagccagcaytcaagtgggagaagcccacactttcagagcantgagaggaagcatggctgcaactgtga
ggaaatacagaggagccacatggctgagcaagagcctacctactgaccattatgcttaagygccacntac
tggatcacatctsaaacttyaacaccaaaaatactttgctaacataccaccctgtgaaaccaaggacaag
aattcagctrcaaataaagaccctgcacaaagcctyagctctctgaaaacatccagaaaagaagtcwact
gactanantcaaantanaccacagttaaaggaacayncacacacagagatgagaaagaaccagcacaaga
actctggcaactcaaatggcnncagagtgtcttntgtcctccaaatgacyrcactagttctccagcaagg
gttcttaaccaggatgagatgactgaaatgacaaatagaattcagaatatggataggaatgaagatcatt
gagattcaggagaatgtcaaaacccaatccaaggaawctaagaatcacaataaaatgatacaggagctga
aagacaaaatarccagtataaaaaagaacctaactgatctgatagagctgaaaaacacactacaagaatt
tcataatgcaatcacaagtattaacagcagaatagaccaagctgaagaaagaatctcagaacttgaagac
tggctctctgaaataagacanncagacaaaaataaagaaaaaaacaatgaaaaaaaatgaacaaaacctc
cnagaaatatgggattatgtaaagagaccaaatctacnamtcantggcatccctgaaagagacagggaga
aagcaagcaacttggaaaacatatttcaggatatyatccatgaaaacttccccaacctcgctagagaggc
caacattcaaattcaggaaatgcagagaacccctgcaagatactacacaagaagatcatccccaagacac
ataatcatcagattctccaaggtcaaaatgaaggaaaaaatgttaaagrcagctagagagaaagggcaga
tcacctacaaagggaaccccatcaggctaacagcrgacctntcagcagaaaccctacaagccagaagaga
ttgggggcctatattcaacattcttaaagaaaagaatttccaaccaagaatttcatatccagccaaacta
agcttyataagtgaagaagaaataaaatccttttcagacaagcaaatgctaagggagtttgttaccacca
gacctgccttacaagagctcctgaaaggancactaaatatggaaaggaaagactdttactagccactaca
aaaacacacttaartacacagaccagtgacactataaagcaaccacacaaacaagtntgcataataacca
gctaacaacatgatgacaggatcaaatccacacatatcaatactaaccttgaatgtaaatgggctaaatg
ctccanttaaaaggcacagagtggcaagctggataaagaagcaagamccaatagtatgctgtcttcaaga
gacccatctcacat
>GOLEM   Autonomous DNA transposon; POGO superfamily.
cagtcatgcgccgcataacgacgtttcggtcaacgacggaccgcatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgtcgtagctgtcgtaacgtcatagcgcaacgcatt
actcacgtgtttgtggtgatgctggtgtaaacaaacctactgcgctgccagtcgtataaaagtatagcac
atacaattatgtacagtacataatacttgataatgataataaatgactatgttactggtttatgtattta
ctatactatactttttatcgttattttagagtgtactccttctacttattaaaaaaaagtttactgtaaa
acagtatgccgtgttacaccggcagcagcctcatacatctcgtgtttaccgcgtctcttgattgcatcat
tttctcttgtgcttgatttaatctcgtgttgttttgttcatcatggcccctaagcgtacaaaatccacgg
ctaatgttgccagtaagaggccacatcgagtgactgacctggaaacgaaattaaaagtgattaaggacta
cgaaggtggaaaatcagtgatggttattgctcgccagtcaggcatgtcccattccaccatagctacgatc
ttgaagaacaagaacaaagtgacagaagctgttaaaggatctgcttcattgaaggcaacgagactaacaa
aaattcgagaagggcctatatcagatatggagaaacttctaatgacctggattgaagaccagacacagaa
gcatatccctctcagcaccatgacgatcacggccaaagcaaaaagtttgtttgcgatgttgaaagaaaag
gctggacccgactacgatgttgaatttactgctagctctgggtggtttaaacgattcaagaatcgttatt
cattacataatgtgaaagtgagtggtgagtctgcgagtgctgatgtgaaggcagctgaagaatttttgga
aactctagataagctgattgtggaggaaaattacttgccagagcaaatcttcaatatggatgaaacctcc
ctattctggaaacggatgcctgaaaggactttcatccataaggaggccaagtcaatgccaggtttcaagg
cttttaaggacaggataacagtcttgcttgggggcaatgttgcaggctacaaattgaaaccctttgtgat
ctggcacagtgagaaccccagggccttcaagcatatcaataagcacacactgccagtgtactacaggagc
aataagaagtcatggatgacccagctcctcttccaagatgccctcctgaattgctatgccagcgaaatgg
agaagtactgtttggagaataacatacctttcaagattttgcttattgttgataatgctcccgcacatcc
tccttttattggtgatcttcatcccaatatcaaagtggtgtttctccctccaaacaccacctctttgatc
caaccaatggatcaaggagttatagcagcttttaaggcctactacctgaggaggacctttgcccaggcta
ttgctgcaactgaggaagacactgagaagacactgatgcaattctggaaggattacaacatctatgactg
catcaagaaccttgcttgggcttggggtgatgtcaccaaggagtgtatgaatggcatctggaagaagaca
ctcaagaggttcgtccgtgacttcaaaggatttgccaaggatgaggaggttgcaaaaatcaacaaggctg
tggttgagatggcaaacaactttaacctgggtgtggatgaggatgacattgaggagctcctagaggtggt
tcctgaggaattgactaatgaggagttgttggaactggaacaggaacgcatagctgaagaagaggcaaga
gaaaaggaaactgcaggagaagaaaaagaagaacccccaagaaaattcacagtgaagggtttagcagaag
cttttgcagacctcaacaagctccttaaaaagtttgaaaacatggaccccaacaccgaaaggttttcatt
aatagagaggaatgttcatggtgcattatctgcttacaagcaaatctatgatgaaaaaaagaaacaaacc
aagcaaaccaccatggacatatttctgaaaagagtgacacctcctcaagaagagcctcaggcaggtcctt
caggaggtattccagaagaaggcattgttatcataggagatgacagctccatgcgtgttattgcccctga
agaccttccagtgggacaagatgtggaggtggaagacagtgatattgatgatcctgaccctgtgtaggcc
taggctaatgtgtgtgtttgtgtcttagtttttaacaaaaaagtttaaaaagtaaaaaaaaaataawttt
aaaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtacagctgtacaatgtg
tttgtgttttaagctaagtgttattacaaaagagtcaaaaagttwaaaaaattaaaaagtttataaagta
aaaaagttacagtaagctaaggttaatttattattgaagaaagaaaaatattttaaataaatttagtgta
gcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcacattcactca
ccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaagtgccctata
caggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagatatgtttaga
tacacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttg
tagcctaggagcaataggctataccatatagcctaggtgtgtagtaggctataccatctaggtttgtgta
agtacactctatgatgttcgcacaacgacgaaatcgcctaacgacgcatttctcagaacgtatccccgtc
gttaagcgacgcatgactg
>ZOMBI   Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>ZOMBI_A   transposon - a consensus.
caggttgagcatcccaaatccgaaaatccgaaatccgaaatgctccaaaatccgaaactttttgagcgcc
gacatgacgctcaaaggaaatgctcattggagcgttttggatttcggattttcagatttgggatgctcaa
ccggtaagtataatgcaaatattccaaaatccaaaaatccgaaatccgaaacacttctggtcccaagcat
tttggataagggatactcaacctg
>ZOMBI_B   transposon - a consensus.
caggttgagcatccctaatctgaaaatccgaaatccaaaatgctccaaaatctgaaactttttgagcacc
aacatgatgccacaagtggaaaattccacacctgacctcatgtgataggtcacagtcaaaayacaatcaa
gactnnncnagcnnctncngttgctnttnctgccagncaacnacagnttgtgcacctngntggcaragan
actgacacatttgctttctkatggttcagtgtacacaaactttgtttcatgcacaaaattatttaaaata
ttgtataaaattaccttcaggctatgtgtataaggtgtatatgaaacataaatgaatttcgtgtttagac
ttgggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaatctgaaatc
caaaacacttctggtcccaagcatttcggataagggatactcaacctg
>GOLEM_A   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataataccgtatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattg
cctacagtattcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatag
cctaggtgtgtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaat
tgcctaatgacgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>GOLEM_B   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagnctc
aggcaggtccttcaggagatattccagaagaargcatcgttatcataggagatgacagctccatgcatgt
tattgcccctgaagaccttccagtgggacaaaatgtggaggcggaagacagtgatattratgatcctgac
cctgtgtaggcctaggctaatgtgtgtgtttgtgtcttagtttttaacaaaaatnttttaaaaaataaaa
aaatwaaaaatttwwaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtaca
gctgtacaatgtgtttgtgttttaagctaagtgttattacaaaagagtcaaaagttaaaaatgcaaaagt
ttataaagtaaaaaagttacagtaagctatggttaatttattgctgaaaaarwwwwwwwwwwwwwataaa
wttagtatagcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcac
attcactcaccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaag
tgcyctatacaggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagat
acacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttgt
agcctaggagcaataggctataccayatagcctaggtgtgtagtaggctataccatctaggtttgtgtaa
gtacactctatgatgttcgcacaacgaaattgcctaatgacgcatttctcagaacgtatccccgtcgtta
agcgacgcatgactg
>HERV16   Internal sequence of endogenous retrovirus HERV16.
[encoded data, 5041 characters]
tagatctgtcgagtacaaaggtggac
>HERVK3I   sequence of the internal part.
[encoded data, 7313 characters]
tttcaattaattcataaacagaaagggggata
>HERVL68   HERVL68 repetitive element - a consensus.
gcactrtntgggannnttnntggaanggaagaagagggaagatggatgacaaaattatgcctgggtvgct
atggagttattcatggtatraaayagcagctragctgctgtctgttatgagaggtaaaagttacctgtgr
aatttgaaaatgatagatccaatcacagagagttggcnysctggatcccytggctgcttttggccwtkct
ggctaaagtnaggaaraarcacancycarrtgatgtctttggtttttgttctytcctccarktgggagga
gaaagggcccaaacattccnaaangtgagcttnntwtgsaswaaagwyawwaacaktwnnttgnagttnt
cttctccaggtggnaggngnaangrtcngaaaantnctnnaggcnngnwttgagtgrrccaaraatgtta
aaagtttgcattgctctctcctccaagtggaagraaaaargttaaatcagttcccagggctggagyaang
ctttagataaaccagaggaggagaaaaagtaaaaaaaaagcccnccaaacaagwaaaccactctagccnt
ttctacagcttagctgctgcyacagcaactcaacnccctcctttcmctacaaccttcanctccagcanct
gtaatgttaaccytgtaaadtgctnaatttactgctaggggtttgantaaacatghaatgagtaaaaaga
aggaaatnattatwgaatsrctttgtattttgtggctattgcatctggatgtatgataaaaattratgta
aaatgttatatgcttgtaatttcataaatgctagaggaatcatcctaatmgggaaagctgcaaagaaaaa
aaagttagtggnawcacaactcccttgctttytgctgcyggtgggtggattggaatttaaactctttgag
tattggaaasagaacaagtctccataactgatgatttttgcctattggarcctctgnaaaaagggagaca
acatnaaaagagaggcaatctccagatggagatacacttttggagttttaaaaanyagtttttagtttgc
taatgwgctcttgytgaaatgagatgtctgacccttagaggctgatgattttcagcctgatgtgcatgat
ttttgagggggtcaatttggactctaaractgacaagataaaaaggmctyttagaaaagccttgcttgtc
acttggacttggaatacagctgtctggntcttcagtntctcagctttgctgctgctgaagaaaagccact
ggcttttttggaatcctgaattcacagatcctaattgcctgtacctgactctaagctgaaacctcatact
gtctgctgtgrgctgtttcagcctcgngntgagctgtgctgaactgaaatnngntgaaatggctcgactc
aatgaacagaactcagactctgggactgttgcagatttaggaccaccctctgtggggccataaactatga
aaacatcacggatgctggctggactgtctgggtcacatacagatgcccacaggaaagggcttgttctctg
atgggaccatctaaaattgagctgctgattggctctatatttctgatacagagactaattgcattcttaa
cttgtgatttctgtcgaaagctgcaagttgggggagggcacattacaagaagtgtgacccctccacccac
tcctgacagattggacttgaccccctctcggggatgtctcactgctattgacttgttgtgttcggctttc
tggattagttgcagtttgcaacaatggactgacagcctgagtctacttccctcacctttctcctggtaca
cacatcttagtgagacagtttgattattaaatgcagctgtccccagaaagggattgatcttttttttcct
aggctgctcaccggataaatgatcaggacgaaaagggtgggaaggttatgtaaactcattttgaaaaatt
ttgaaaattcagaattcatcctgaccaatttctgaacatgatgtgtctttccggttaagttgtataaaaa
tgtttttctataaaaatgtttttgtccctcttgcatacaacccttccagacaaaaggtctgggtgagagt
aagagatgattggagaaatatgaagttaagattgtaagttatgaatattgctgaatgggacacactgatt
ttgtaacaacggagaaaaaagaaaaacctatggaggcacggggtgtgagagagggcattaatgatctttg
tttttcagaactgctcctggaagctttcccctcttcctgaagaaaaattccccatgctgcctttccaagc
tgctgcgagcgctttgaattcaaactgactgctgagcctaagatcacacctgacagcgctgactatgaga
cagcagggggtggccccagctcctgcactttccacgaagaacacctccagatgtcatccacacacatgag
acggatgaactggtgtcatggacaagcaaaactgtttggaactgactgcctttaggcagtccctctgaaa
ccaaggactaaactgaattaattggactagactctttgggagtagtccccgtggtaagaggccacactgg
ggaccctgttaacctgtactgcctgactaatgtatgtcctgcttggggtaccctaacaattgtaaactct
ttgtttccaggggtaccacgtgtgccctctgggattgtacttttatgtgtaccctgactatcatgacact
gcctcagccctggaaggctttcaggtcagcttcaacttactggccagagttgtgctgtgcctgaattgat
gcctcaggccaraaaaaaaaaggttaatacagaaacttaaggaggaagccacctggctttctaagataga
cctttatggttaatgggatttgttttaactggctaaattcaggacccctaaagggcataaactgagatca
atactgcaggttggtctcaccctgctgcgtggggtcctactgataataattttgctgtaaagatgccttg
gccaagggggtggactgtgcagaagag
>MER70I   a consensus.
[encoded data, 5041 characters]
ggtgggcatatgaaatggactagctttgctaagggggatatctgggttggggg
>L1M3A_5   L1M3A_5 LINE1 repetitive element - a consensus.
gagtgawgtcagcaagatggcagaatwggaggtctcaggctccagtctccctcacagaaagtccgactag
caactattcacagacaagaacgcctttgtgaaaaatgccagaacttggaaatgagrctgagacanctncg
tggancacagaaacgaataaaaaccacattaaaagggtaagaggaaccgtctcactttaaccacgttgcc
cctmagtcggcacagtrccacacngagagaawttccccgggcctacagtttctacagtgggaaaagagag
ctkgaggtggacatccagcttccctagcattccaagatgcttcccaggargcccactcynatctcacctc
atgaggaaacactgagggaaatggcanggctagaccgtctggagtcaggtagaaacaaaaaaagggggca
nagctcatagtaaccagtgcacggatcttggtggtagctctgtattcctgccagcggtggcgcctgatca
gaggtaccagccaatggcatagcccacccgcaaagctgagctggtcgctcccagaagcacggtgagaagt
tcnacccggcttgagtccctagatggccagcctccaaacccagccttagascctaccccagngctccacc
caggcagggagatacacaccacmatgtatttcagcagagcacagaggctagacctgcctgacccaggagc
ccaaacagtgactcggcccagcctcaaagcccaccccaaggacccacacaggcaggaaggcaaacgcgga
ttgtgcakctctaccagggcaaagtgccagccaccgtccattcstwncagcaattccatctaaccttgca
gcctaggggctggccctgcccaactgcagagctsaaacagcggctccgcctggccasagagtmtaccccg
tggcycagcccaatagacgcgactncaacgtccantcagcggctccgcctaannncagagcccagccagc
agccccgcctgacctcagagcmcaggcantagcccgnccagctagagaacccaamagcaagcactgccta
cccatggttattaccagctgtcccatccagaatcacaagctggactgaataatgaaggtctwttcctgnc
gaagaacacctgtaaaagccagaagaggtggctgcctmgtcaaatgcatggataccaatgcaaggacgca
agggttacgaagaatcaaagaatcatgacacctccaaaataaactaacaaagctccaacaatggamccta
aagaaataaagatctataaaatgactggcaaagaattcagaataatcctcttaaagaagttcggtgagct
acaagaatacatagatagaaaattaaataaaatttggaaaacaatacatgaamaaaacgaaaagtttgac
aaagaaatagaaacgawtattctaaaacccaaatagaaatcctagagatgaagaacacaattgctgaaca
aaaaaattcaataaaaagcttcgacagcagactcaatcaagcagaagaaagaatcagtgagctcgaagac
agaacatttgaaattatccagtmagaggatcaaaaataaaaaaaatgaaaaacagtgaagaaagcctata
ggaattatgggacaccatcaagaaaactaacatacgcataatagaaatnccagaaggagaagagaaagaa
ggccagaaagyatattttaagaaataatgactgaaaacttcccaaatctggggaaagatgccagcatcca
ggtacaagaagcaca
>MER81   MER81 repetitive element - a consensus.
tagggtgaccaaccgtcccggtttgcccgggactgaggggtttcccaggacgtgggactttcagtgctaa
aaccgggaaagtcccgggcaaaccaggacgagttggtcacccta
>MER94   MER94 repetitive element - a consensus.
tagggtgaccatataatttatcgtccaaaccgggacacttttgagagtgaaagggggcgctattaataat
tacgccaggacaacaggyataaaccaggactgtcccaggcaaaccgggacatatggtcacccta
>MER114   Medium reiteration frequency repeat - a consensus
tgaagttgttnacattttaattgattcttctctawagaccataatatttttaattgagaaaatattctct
ctataggtgctgaggtacctggtaagctcagagcaaattctactaaatggargatattbtcaattttaat
tttttttttattgaaatgtgtaaatatttcagcccaaatatttttataggtattatctttttttgtctcc
attcagaatacctttctttgacaaatatttttacaagacaaaactcatcaaataaattgtctctatttat
gattcttttgaatattttaccaaatttagatgctgcaaaattataggccttctcaattttattccattct
agtacagaatataaatttatccaattaaaaatagaagctccatcaaaagattcttcccataagttaagat
attccaaagtacaattatagaattatagaatttcaaaattaaatcttgtatacacatttgagctctcatt
atttaatttgttcagttcctcccttgmttttgtaggaataaatttcaatgtctttctgtgtggcaagctt
tgttttnaataattacaattynctaaaactttaaaaagctgaanttttttgntctctatttattgaanac
nttgattaaagatttcca
>L1M2C_5   Primate L1M2C_5 LINE1 repetitive element - a consensus.
ggagagtgatgtcagcaagatggctgangaacctagagatgcctggtgctcatcccccccacccccacaa
gaaaggaccaaggcaatgaataaacagctaagatttgactggagtgtcgaagggagagtactggagtgca
gtgggggagtggagatgcacctgtggtgactggaagtccaggagggggcagcatggaggcacctggcctc
tgcagccccatcttccccacctggatcagatctgcctggagtcaggagggacttcccattgcagggaaaa
ggtaagcagaagatccccaccagcccccattgccaccacaaacacctacagtccttactacaggagaatc
ccacagtcctcacaagccctgagcccagtttggagagctgctgggaattcatgcagctgctgcattgcwc
ctggattaggagcacaaggtgtgcactccccacccccacccaccccctgtgagccaagctgctgcagcay
rgtgccatcttgagaccagagccacctctggagtgcaccctcctctgggggccagtagccactgcacctc
tccagcactggggctccatcttcattccaccaagcccacacgtgggtggctgaatgccacaaccccagct
gtgtagagcctgggcccaggattggctgtgactctggtcctgcacagcagggaaaccaactcccaccacc
acacttccagctagaggaacagtctggcagtcccacccagggtaaacctgcccttgagccagccaaactg
ctgcatgccctcccccaagcaggagaggccctcaagcctcyaagcagctgacaytgctcccaggccagca
gagtggctatacgcccatgcccaggtgcctgagaaacagccctgcagtacccnccccaccccctacagac
atgcccctggcctgcccaatggccctgcacctacaatcagggcctgagaaacagccctgcaggctacccc
tggcagacacgcccccaggccggccaagcagctgtgcgcccatgtcccgggcctgagaaacagcccngtg
cacaggctaccccctggtgggcatgcccccaggccagctgagcaagccatgcacccgtatcccaggcctg
agaaacagcccyatgggccaccccatgggccacccctagcagacatgcccccaggccagccaagcagccg
tgtgcccgtatcctaggcctgagaaacagccctgtgggccacccctagcagacacacccccaggccagct
aagcagccatgtgcctgtatcccaggcctgagaaacagccccatgggcccacccccagcagacatgcccc
caggccagctgagcagccgtgtgcctatgtgcacctaggcctgagaaacagccctgtgggcccacccctg
gcagagccacaccactgccaccacaaactctctcagcctaggccactgagacactcacaaatgtcactag
tatggattacagctgaagaaactacatggagactacactactgcatccacctagaaccaaagccaacaca
ccccactgaactaacaccccaagacccatttatacaaataagtctttccctacaaaacctactccataaa
attggaagaggtgacttttccaccagatgtatagaaatcaatgtagggacacatcaaacatgaaaaagca
aggaaatatgacacctccaaaggaaaacaataattctccagtaacagaccccaatcataaggaaatatat
gaaatgccagaaaaagaattcaaaataataatcttaaggaaactcagtgagatataagagaatacagata
gaaaattcaatgaaatyaggaaaacaattcatgatttgaatgagaaattcaacaaagagatagatatcat
aaaaaagaaycaacagaaatcctagagctgaagaattcaatgaatgaaattaaaaatacaattgagagtt
tcaacaacagactagaccaagcagaagaaagaatttctgaacttgaagacaggtcttttgaaataacaca
ggcagacaaaaaaaaaaaaaaaaaaaatgaagaaagcctacaggatttatgggacatcattaagtaaaca
aatatttgcattatgggyattccagaagagaagggaaaaagtntaraaaacatntttaatgaaataatag
ctgaaaacttcccaagtccaggaagctcaaanaacccnaaatagatcctctctgaggcacattatcaama
gtcaaattgtcaaaagtcaaagacaaagaattctaaaaacancaagagaaaagcatcgtcacatataakg
gaatccccattagactaacaa
>MER4E   Long terminal repeat of retrovirus-like element - a consensus.
tgaggactaagctctgatttttttatcttgcccaaattcctatctaaggggtctggggagtcatgcccta
caaaccataaattctcatcagatgggttttatttaaccctgtatatcgtgacttactttccaatctgact
ctggcataacattagagacaaggaagaaaatcaaaatattttaccccaaaatatatttccttgccatacc
ttgaaattgccctgcaaagtctcttgtgggaaaaatccacattctatagagaatcccctttcccctttgt
ttttctttccttccttcccagatccaggagataatcaactaagagccaggcacccttttaggtccgataa
gaaacattttacaacctgctctctctgaagtctgctatctgagagcttcctctgcacaataaaacttggt
ctccacaatcctttatcttaacctgaacatttcctttctattgatcccaggtcttcagataaactcaacc
aattgtcaaccagaaaatgtttaaatttacctatagcctggaagcccccgctttgagttgtcccgccttt
ctgaaccaaaccaatgtatttcttaaatgtatttgattgatgtctcatgcctccctaaaatatataaaac
caagctgtaccccgaccaccttgggcacatgttctcaggacctcctgagggctgtgtcacgggccatggt
cactcatatttggctcagaataaatctcttcaaatattttacagagtttgactcttttcgtcaaca
>L1MB8_5   L1M5 LINE1 repetitive element 5' end - a consensus.
aaggagtttcacttctggaatggcagcatgaggagctccgnagacccnctccccagcgaaacaancataa
ctggtgaaaattatttttaaaaaaacaaccatttaaagtctctggaaattgtcctaagggcatacagcaa
atgaagaaacatttattcaagaaaatctactaaatctcagtaagaacagtgagagtctgtggcacttgag
ccacgacccgctcccaccctcccccctccccagctcagcntgacagaagctccactccgggcgggtgcgg
ccaagaagacggggctccctctcccctcagctcccagtcaagggntacggtatctcnccgggaggggcag
gccgccagcatttctcatcccctccagctccgngttgcagaggctaaattccaggtgagtgtagctgaga
ggtcgggggctcccttcctccacccagcccccactcatagggcggaggctctaccccaggcgcggcaggc
cgagaatactggggccctgattgccctcaccccagctcgctcatagggcggaggttccacgccgggagag
gcaagccgagaagaccagaggctaccgcccccgcccagcgccctgctcataaagcaggggtgtcactccg
agagaagcgggccactgtccccgcccccagctccggagcagtggctcagagattttgcccagggggagag
gcagnccataagaacagagagctccgaagctctccccaaaggaactgactttatttgaaacagagtgtgg
ggaagttcaagcctaagggtactctcgaaaacaatggagattttggtggtaagcaattaagaggaggctg
gtagctccatgagagcaacaagctaaaccataggccagctagtttaccagagagaaccagggaaagagac
agctaagaagagccctcctggggtcagaacaaacctcaaagactggcctcaaaaactacccctrcaaagg
ggcccgaatttaattggatcagactgtggagcaatttatgccccagggcattgtcgaaaacaatagagca
atcagccggcaattagtggagcctaacagctgggtgtgataccaanngaggcagacagcttaacagagag
atcagggaaagagacagtcaaagagagccctgctaaaaccactgtcatcccagggtgactgtgcgcatgc
ccaaggctgcgccctctgaggagcgacatcagaggcttcacactgngggggaaatagacttcactaaaat
agtccagccaagtcactaaacaaataaacaagcaaaaacaancacnangagccgggggnggggaatcagt
atccagagttgctacaatatattacctaaaatgtccagttttcaacaaaaaattatgagacatgcaaaga
aacaggaaagtgtgacccatacacaggaaaaaaagcaggcaacagaaactgcctgtgagagggcccagat
gtcggatttagcagacaaagacttcaaagcagccattataaatatgttcaaagaactaaaggaaaccatg
cttaaagaagtaaaggaaggtatgatgacaatgtctcatcaaatagagantatcaataaagagatagaaa
ttataanaaaaaaccaaatggaaattctggagttgaaaagtacaataactgaaatgaaaaattcactaga

>MER21   a consensus.
gccctyctrttkcagraaaacctctctcaaaccatgttttycctctgctstcataccacgacaacagtcg
tcaacacagaagacttctgtgaccaaatgtgtggaggattttccccacacaccaagcagcagacaccagc
tgggcgtcctccaaytcagttccgacactgtctacctggagatagcgtcagatcccacaggttgaggtct
cagtccccaagactgnccccaccttcagayacagttgcaagyccgggyctctggaacttctgaccaactg
gcttcaarttggggttcccacgacacctctttaggttcgaytaatttgctagagtggytcacaaaactca
rrgaaacacttattawgtttactggtttattaatagatgatatttcaaaggatacagatgaagagataca
tacggggcggtctggaagrkcccagcgcaggagcttccgtcytgatagrrttggggttacaccctccaga
ttcttcaccttctgtyagcctccacgtgttcagctctccagaagctcyctgaaccctgtcctttgggcct
tttatggagayctcattggntgtccatgactgaagcatggacgaytgnnawaatgtgattggrcaaaaag
ggtctgatctaatcccagcaaggyctgtccagattcttcttggtctctttgtgcagcattccttcctcca
gggtatggggcaggaccycctctggaatgagggtcttacgacccacaatcagattatagagtcctgcctt
gggcggmtgaaargaggrcargagaaggycagagaratattctgtttcctgaggcctaaagcacctctac
attatagcgaaagactgtaaccatggtcatgtgagttatggacaagaaccatggacaaaaacacatatac
aatcatatcccacctcccaacgc
>L1M2A1_5   5' end of the primate L1M2A1_5 sequences - a consensus.
caggcactcccatgcacccctaggagggtacctgctgccctgctatgggctgctgtgagactgagacatg
agtngaccacactccccacagcttcttgcccatgctgcttgcctgggaggtgccccaccctctctggntc
ccaggcccaaggtgnntgccattttgagagtttaatgctgggctgcaccccacccttggcctgagtttgg
gctgacgtggctgcagctgccacccagccaaggagggacagggaaaccaggctctcctatgcatatctag
gacaatacccactgccctgcaatgggctgctgtgagactgagatgtgagtggaccacactccccacagct
tcttgcccatgctgcttgcctgggaggggccccaccctctctggtcccaggcccaaggtgccattttgag
agtttaatgctgggctgtgccccacccttgggctgagtttgagctgacatggctgcagctgctgcccagc
caaggagggacagggaaaccaggctctcctatgcatacctaggacaatacccactgccctgctatgggct
gctgtgagactgagacttgagtagaccacactccccacagcttcttgcccatgctgcttacctgagaggg
gcccccaccctctctggtcacaagcccacagctggcaccattttgagagtttaatgctgggctgtgcccc
acccttgggctgagtttgaggtgatgtggctgcagctgccacccagctaggggagggacaggggagacca
agctctcctaagcacacttaggacaatacccactgccctgctacaggtggctgtgggactggggactagc
ccacccaacccatcacagcttccagcaacaccaacatggactgcttgggtcccagtgggttgctccacca
ctgctactgccatcacccacatcacaccagctgcccaggggcctgagaacctgcccacacacctggccca
ccactcccactactagcttctaagcaagccacctggaggcccaagaatcagccctccaggacccactaac
accagagccagtgtaagctgctctggggcctaaaaacaggcacactcaccccactgctgccaccactggg
gcctaaagactggctcagttggcgtccaagtccccagcaaaacttcaccacaacctcaactaataactgt
accctaagccactgaggaaatcacagataccactgaccctgtgtactgccaaagaagtcatacaaagatc
acactaccacaggcacccaaaatcaaagccaaagtatcctaactcaatcaacaacatatatacatcttca
ggaaaaaa
>AluYb1   Alu-Yb1 subfamily - a consensus.
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTC
AGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGGG
CGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCA
GTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCA
>HERVFH19I   flanked by LTR19 - a consensus sequence.
[encoded data, 7810 characters]
ataactatagggtctggat
>L1MEC_5   L1MEC_5 LINE1 repetitive element - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>ZAPHOD   hAT-like autonomous DNA transposon (a consensus).
cagtaccgcccttagacccgggcaagaggggcccctgccctgggccccgcgctttagagggccccgcata
tcacaaacacacacaaataaatttattaaagaacacatgggtgcctctgtcactcgggatccggcgctca
gcgctggcacagcacgacccgtaaccctaaacatccgctctcgtgactaacaccgttcaggccccaggga
aatgcttctccacatctcttgccctgtgtcctcgaaacaaaaggcgactgtgtccgaatgccatgaaggt
ttgtgggttgtgccgctgccgacgtcggagacggacactgcttcggagtgcagggaggatttgagcggcg
gaagcgcttaggtaagagaaaagacaaattaattaacttgtcaaatccttcctctcagatagcatgaatg
caatagattcttgcataacgaagtatcatttcccagtagtgccgagcgtccattttcttgcttctcttcg
tgttccaattcgtggttccggaggtactcacaaattagcgcggtattcgcaacagttgcacatggcagct
gaggaacattttgcaatattaaacaattcatattactcttaaatttgtatatatgtaggtctagacgtaa
catgcatgaagcgtgataccgattctttacattggcaactagatggacattgaacgctagaattgcgaat
agttttatttttataaaaatatttaataagatttaattaaattttcaaaaattaaataaaaatttcagct
ttatttaaataattttgatttaaaanttttatatttattaattataatttgtattttgccttttaatttt
aatagataattttgaatattttagaaaaaaaaacatataaagtaaatatttaaattttacatttacttta
atttacatttttgatgaaaatatattcaaattttgtanactttgaatacaattaattttatttttaatcc
tttagatcaccgagaatgagtacaagtcaagatcntgatagaaatanaaaatacnaaagtggagctcaga
aaanaaaaaagctgaaaagaaaaaatagaaaatcttcaaagaggcggtctgcttaaatttttnaaaactg
naaacaatgaaagtaagcagacttctgcngagcatgacccacataaaattcgcaaacaagacattacaaa
ttctttatttaataaagatttaattactgatcaaaacaatgaaaatgagcaagaaaattattctnatcaa
atccacaacttgaacaggtcagatgaaatccctgcaacttcacgttcttcactaaatgaagatttaatta
ctgatcaaaacaatgagaatgagaaaaagaattatttatancaaattcgcaactcaaaagaaacgaatgc
aactccggcctgcccattagaagatgaagaaagttacatttatgaaancggcaaattgaatgacgaaaaa
aaaaacctctagctttattacgctttattagatggcgatcctagaaaatggtnatcacatccttctnaca
gcatgagaatgtttctagcaaaacgcaattcgattcaaattaatgntnatacaattttccactgaatgaa
catggcagaaaatttagtatttnattttataccaaaattntttcnaatggagaaagaatagagacwtttt
tmatattcaagtcagaagtcgaacattttgttactattgttacatatttcactcnatttttacagtcagc
tttgtccaaagaagtaatctgtnactggaaacacttngattttnaattaaaanaatacaaaatgtcattt
acaccgcaaaaaaatacacacgcaaatactagaatggaaaaaaanaggccaaatnancaatagtattcaa
caaataaacgcaaancaaattanaatattgntgtgatgttcttaaagaaaatattangtgtccaatattt
agccaagcataatgatgctttcacgtgncancaacagcncaatgtttatagaaaacagtggaaattttct
aggtttagtagaaatnatttcgaanttgatgcnaaaatggccaaacatgtaatacagattaaaaatgaac
naaatgatcactacntagaatggagaattcaaaatgagattactantttaatnggtantaaagtgagaga
agaaatcatagacaacaatttagtaagtaaatattactcagttcaactagattgtgctagggacaaaaat
catgttgaacanctaacatttattgcatattactgaactatcagaggaagaaaacaaggatatcaaaatc
aattaatatttcattggttttatacctaaaagtacaggttttganttaagtgaagaactgaaaagacaac
tttcaattttaggnattgatttaaaagattgtcgagggcaagcctatgataatggcgctaacatggttgg
taaaggaaaaggtgtacaagccagaattttggccgaaaatccagaagcattctttgtgccatgtacagcn
catagtttgaatttgttactaggagacgtggcctcaactgtgccaanagnagtgatattctttggaacaa
ttcaaagattatatacgatattttctggatctgcccaaagatggaacatcttgatgaaanacatatcaaa
tttgaccttacaaccactctcagacacatgatgggaatgccgactaaatgctgttaaagcaattagattt
aatttagacaagatanaagatgcactagaagagttaagcgaaacaacagaagatcctcaaataaaaagta
aatcgtggtctttggnagaaaatgaaattaattttgaatttgcgctatccacagttatttggtatgaact
gttgnttgctattaataangttagcaaaagcttatccaaacagatccgagtttggctattttatcttttt
aaangattaaaacntatttttttaaattttagagaaaatggtttttcnaaatcaaaagaaactgcatgtg
aaatatgcaacaaaagtgacattccaataaaatataaggaaatcagaacaagaaaatgaaaacatttgca
tgactntgaaggaaagaattcacatacaaataatccccaaactaatttctatagagactattttctggcc
attatagatcaaggtatagtctcgattgaagagagatttgaacaaattgagcaatatattgctattttcg
gttttctttataatatcccagcattgaaaaatttgaaagaagaacttaagaaatactgtatggatctaga
tattgctttaagagatggtgaaaatngcgatataagtgatagtgatttatatgatgaaattaaaatattt
tgtaatattttctgcgataatgataatttatcatatgcgaccccattacaatgtttgaacatgatatgta
aaatttatggttcatttccaaatctaagtattgctttaagaattttattgacaattccagttgctactgc
ctcagcagagnaaagtttctccaaattgaaattaataaaaaactatctaaaaactacaatgactcaagaa
aggttgtctaatttggcattactgtcaatagaacacaaattatgtgaaaatcttgattataacaacataa
ttagtgattttgctgaaatgaaggcaagaaaaataaattttatggaataaatacataataatttatgaat
tatgtatgtctttattttattactcatccaaacattgccggcccatcaacagaacacccagacatgtgca
ataataattaaattcagtcatctttgatattttgccaactttcagtcatataaaaaccatagctttacac
atatttttaattttgtcattatgaaggtatatttgtcaaggtaggaggatagaacatattttatttaaca
gtttgttagcttgatttataacttttaaatatttagacatatggtatgtgggcctccatttgtactcttg
ccccgggccccgcaaatgttaggggtgggcctg
>L1PA14_5   Primate L1PA14_5 sequence - a consensus.
tagccaggtaggcaangcctgctagagcttcyagcccagtggtcccacttctgtgtgaactcagctggag
ggtgcagcctcctgttgtcccaggaagaccccacccacccctgccactggtagccaggtgggcaacgcct
gctagagcttctggcccagtggtcctacttctgtgtgaactcagctggagggtrcagcctcctgttgtcc
caggaaacacctggatggcagggcaggtgaccccacccacccctgccactggtagccaggtgggcaatac
ctgctagagcttctagcccagtngtcctacttctgcctgaanttgctgaggggtacagcctcctgttgcc
ctggaaacacccagatggcagggcaggcaactccacccacccctacctcttatagccagatgggccacac
ctgctagagcttccagcccagtggtcccacttctgcctgaactctgtgggcaggcacaaccctatgtttc
cccaggaagcacacagacagcagattagggctaacctggcaaggatacagcttgtctgccaactgtggcc
cctgcctgagggagccccgtggaccagaacacccaacaaaagaaatgtgggcatggagacagtaattgga
gggggctcctccaagacccaggagtggactagaatcaaagccagtcaacngaacccaccttataccataa
tcaaacccccaagggcatcaaagaagaaaaaagaaaaaaaaatccatccaaaaggacagcaacttcaaag
actgaaggaacatcagcccacacaaatgagaaagaaccagtgcaagaactctggcaactcaaaaagccag
agtgtcttctttcctccaaatgaccacactagttccccagcaatggttcttaaccaggctgaaatggctg
aaatgtcagaaatagaattcagaatatggataggaatgaagatcatcaacattcaggagaaagttgaaac
ccaatccaaggaatctaagaaatacaataaaatratacaggagctaaaagacaaaatagccattttaaaa
aagaaccaaactgatctgatagagctgaaaaactcactacaagaatttcataatgcaatcacaagtatta
acagcagaatagaccaagctgaggaaagaatctcagagcttgaagactggctctctgaaataactcagtc
agacaaaaa
>HARLEQUIN_LTR   Long terminal repeat of the HARLEQUIN retrovirus - a consensus.
taagggaggagaccacccctcatattgtcttatgcccaatttctgcctccaaagaaagaaraagtaaaaa
ctaaaaggcagaaatgaaatccacaggcagacagcccggcgccacaccctgggcctggtagttaaagatc
gacccctgacctaatcggttatgttatctatagattacagacattgtatagaaaagcactgtgaaaatcc
ctgtcctgttctgttccgttctaattaccggtgcatgcagcccccagtcacataccccctgcttgctcaa
tcgatcacgaccctctcacgcggacccccttagagttgtgagcccttaaaagggacaggaattgctcact
cggggagctcggttcttggagacgtgagtcttgccgawgctcccggccgaataaagcccttccttcttta
actcggtgtctgaggggttttgtctggggctcgtcctgctaca
>LTR12C   (HRES-1/1) - a consensus.
gtgagaggtgacagcgtgctggcagccctcacagccctcgctcgctctcggcgcctcctctgcctgggck
cccactctggccgcrcttgaggagcccttcagcccgccgctgcactgtgggagcccctttctgggctggc
caaggccggagccggctccctcagcttgcagggaggtgtggagggagaggcgcgggcgggaaccggggct
gcgcgcggcgcttgcgggccagckcgagttccgggtgggcgtgggctyggcgggccccgcactcggagcg
gccggccggcccgccggccccgggcagtgaggggcttagcacctgggccagcagctgcggagggtgtrct
gggtcccccagcagtgccrgcccaccggngctgtgctcgatttctcgccgggccttagctgcctccccgc
ggggcagggctcgggacctgcagcccgccatgcctgagcctcccccccccctccgtgggctcctgtgcgg
cccgagcctccccgacgagcgccgccccctgctccacggcgcccagtcccatcgaccacccaagggctga
ggagtgcgggcgcacggcgcgggactggcaggcagctccacctgcggccccggtgcgggatccactgggt
gaagccagctgggctcctgagtctggtggggacttggagaacctttatgtctagctaagggattgtaaat
acaccaatcagcactctgtatctagctcaaggtttgtaaacacaccaatcagcaccctgtgtctagctca
gggtttgtgaatgcaccaatcgacactctgttatctagctactctggtggggacttggagaacctttatg
tctagctaagggattgtaaatacaccaatcagcactctgtatctagctcaaggtttgtaaacacaccaat
cagcacyctgtgtctagctcagggtttgtaaatgcaccaatcgacactctgtatctagctaatctagtgg
ggacgtggagaacttttgtgtctagctcagggattgtaaacgcaccaatcagcaccctgtcaaaacggac
caatcagctctctgtaaaacagaccaatcggctctctgtaaaatggaccaatcagcaggatgtgggtggg
gccagataagagaataaaagcaggctgcccgagccagcagtggcaacccgctcgggtccccttccacact
gtggaagctttgttctttygctctttgcaataaatcttgctgctgctcactctttgggtccacactgcct
ttatgagctgtaacactcaccgcgaaggtctgcagcttcactcctgaagccagcgagaccacgaacccac
cgggaggaacgaacaactccagacgcgccgccttaagagctgtaacactcaccgcgaaggtctgcagctt
cactcctgagccagcgagaccacgaacccaccagaaggaagaaactccgaacacatccgaacatcagaag
gaacaaactccggacacgccrcctttaagaactgtaacactcaccgcgagggtccgcggcttcattcttg
aagtcagtgagaccaagaacccaccaattccggacaca
>HY3   Ro(hY3) pseudogene - a consensus.
ggctggttggagtgcagcgntgtttacaactaattgatcacaaccagttacaaatttctttgttccttct
ccactcccgctgcttcanttgacta
>HY1_SINE   SINE-like element derived from HY1 scRNA - a consensus.
ggaaaactcggctggtctgaaggtagtgagttatctcaaytgattgttcacagtcagttacagatcaaac
tccttgttctactctttccccccttctcactactgcacttgactaatcttaaaaaaaaa
>HAL1C   Primate HAL1C repetitive element - a consensus.
aaaaaaatcaagaaaacgaaaaggaaataaatttatacaaaaancatacyctcancataacttgaagaca
gagaatnncncaaacttcaaantaactgtaagtaaaaagataaaawtcaccaagtcccaaagtktcatct
ctcatgctcctgcnnangcccangnccccacttanngctntgtggcctncnacaaggctttgtggtnagc
aaaaacagatnnagaaaaacnacagggaagacagaagagggaagctagcaaaaggngctaaggttcatct
tgaactaaaactactgccagaaagactaagtccaccttaaatctgaaaatactaaaaaagtatctaggna
gatcagaacatgaactacagggaagggacttaaaagtntgcatgatttgaagagacagtcttccaaacac
anagcttctgagggagaaaaaaagtaaaaaggaaggaaaaagaatcctttggcaattgggtggtaaagag
gaaaagaagcaaagggggaaatttagggtcctgcaagacaaaagagaaccacaaaatcagaggactcaca
actcctcccaccaccaaaacaaaaccaaaaaaacctactaaagtacctggactttgctatactgacagaa
gaaggtrccattaaactagaaatcttataaaatatcccaatatcataaaaataaaaaaaaaaaaaatnaa
caaagctattacaaaaaaaaaatattagaaaataaaaatcaaaacatttcaactgatgaaaattctcccc
cchtncncnnnnaaaantnnnaaaaanccaaaaaaacaaccatgaagcagaagaaaactgtaacacaaca
ttccaaacagaattaaatatactcaaacaagcatttggagatattnaaaatttaaaaaaacaccttgaat
cagaaattcaaaaactaaaaacagaaatggacaaaaaaaataaaaaggaaaaaataaaataaaaragttg
attgaactcaggaaagaaatagaagaaaaagacaaaattatctcagaaatgaagaataaattacaaggtg
cccaagggagaatagaanaaatagattcaaatgaaaatttaataaaagacattaaaaaaaaatagaaaaa
aaaaanaaaataaaaaaaataaaaaataaaaagaaaataaaataaaagaaagaagtaaaaagaatcagag
agaaagtagtagaaatggaagacaggcaaaaaagaaataatatttgtataattggagtccctgaagaaga
aaaaaaaaacaatgaaacagaaataatatttaaaaatataatccaagaaaactttccagaaataaaanat
rgaaaaawtagaaatanaaaaagacctgaatctacatattgaaaaagctcactgaatacctgagaaaatt
aaacccagaataatcaactctaagacatatcctagtaaaactattaaaattcaaaaataaaaaaaaaatc
ttaaaagcattcagacaaaaaaaacaaatnacatataaaagaaaaacamwnnaaaacaattagactaaca
ttagatttctcaaaaacaatatacaaagccaggaaacagtgaaacaacattttcaaaatactcaaagaaa
aaaattgtcagccaagaattctatatccagcnaaactatcattcaaaaatgaaggcaaaagaaaagcagt
tttcaanataaaatacaaaaactgagagaattctntatccanggacccttcctgaggaatctactagagg
ncgancttcatccaacnaaaagaatgactgnaanaacttcancaaaagaacngatsktaagcatttaata
atatataaanntananmnaagantaaaangnnggggtcawgggtagaaaagaatatgtaaatataatatg
tctggcaaagtagaaagaatgcaannnaaaawnggranna
>AluYa1   Alu-Ya1 subfamily - a consensus.
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTC
AGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGG
CGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAG
GCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTC
A
>AluYc   Alu-Yc subfamily - a consensus.
ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtc
aggagatcgagaccacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgcggtggcgg
gcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgc
agtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctca
>AluYc2   Alu-Yc2 subfamily - a consensus.
ggccgggcgcggtggctcacgcttgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtc
aggagatcgagaccacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgcggtggcgg
gcgcctgtagtcccagctactcggagaggctgaggcaggagaatggcgtgaacccgggaggcggagcttg
cagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctca
>AluYc6   Alu-Yc6 subfamily - a consensus.
ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtc
aggagatcgagaccacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgcagtggcgg
gcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccggaaggcggagcttgc
agtgagcggagatcgcgccacagcactcccgcctgggcgacagaacgagactccgtctca
>AluYb5   Alu-Yb5 subfamily - a consensus.
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTC
AGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGG
GCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGG
GGGCGGAGCCTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTC
A
>RICKSHA   RICKSHA repetitive element - a consensus.
gggtttggatcataatcccgaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatcctaaagtctaaatccctaaagtctaaaatccctaatgtctaaaatcccgaaaatcacaatca
cgaaagattaaaatctcaaatattgaaatcctgaaagccgaattctggggaagggattagtgcgttttcg
gttgtacgcaggatagttgcatcatgttagttgcatcatgttaggtggcagaactattaccttgttattg
tctttatttggaaattaagtatggtttaaggagacacgtatgggtgccaagttgacaaggagtggacttg
tggacttaattttaggtgtcaacttgactggattaaggaatacctagaaacctggtaaagcattattttg
ggtgtgtctgtgagggtgtttccagaggagattagtgtgtgagtctgagcggactaggcggggaagatct
gccctcaatgttggcgagcaccatccaatcggccgggggcccggagagaacaaatacagaaggcgaactg
gtctctctctgagagctgggacagatttttcttctgctgccttggacatcagaactctgggcttgctggc
tttggactccaggacttacaccagtcctnnnaaccgggtcctgaggctttcggacctcagactgagagtt
acaccattggcttccctggttctgaggcttttggacttggactgagccatactgccggcatcccagggtc
tccagcttgcagacggcctgtcgtgggacttctcagccaccataatcgcgttagccaattcttctaataa
attccctctcatrtatatatatatcatattggttctgtctctctggagaaccctgattaatacagatttg
gtattggggaagccgaatatcattccttcttactgtattccttacaacataatagaagagatctgtgaaa
ttgttccctcacaaaaaggctgtgataaaataagtggacgaggctactcaattgtgaaagataaaattta
aaagctaattattattggtgctgcaaaagcagaaaatcacttaattacaatggccgagcaataaccagct
tttaaatggacagcatatacttacaaaatttgtagaccacaaccactctgcaaatacacatgcagcaagt
gtcttgaagatggcaamartgaaaattcagtttaaaaatacawsaattscctgccaaattattcaatctg
tatgacttctacttctttacacaaaatttatgctatgtatttcatcttcgcatcatttccaatactggag
gtataaattgtgtagagacttttagagagttctaatttgttttatgcattttttgcaaatttgactccac
gaaagtgcattatcacaatgttgactttgtgtgtaagcattgtgcatgtatgtaaaaacgttgaaacttc
ctcaataaatgaagagatgtcctttttgtacatctgcatttgtgaaagataaaatttctcaagatcttgg
ctctttgggcgactgcatatgcggtggtgacccatcgcggtttttgatcgatctcgtcaaaagacttagg
ttgttcgtcacggtatttcagatgaccgcagttataaagctgggtgcacacaattaccaaccatagtgat
atgcgtttatacatttccctttttgacctatttctttatgaatacggttcgtctgctcataactgttata
cccgtgcgactgtcattagtatacctgagtgtttatgcttgcaaaaatatgtatgttattattgcctatt
ttattgtgtaaagtggcctatgaagtgttctgtcatgtttttatatgtttctcaaataaatcccctttta
aaaatgtaaataaattatcttttaaagaatttttaaattttttttcagaattatattttcgggattttga
tctttcgggatttcaacattcgggattatggcgtttgggattgtgtctttcgggattatgatccaaaccc

>RICKSHA_0   RICKSHA_0 repetitive element - a consensus.
gggtttggatcataatcccaaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatccctaaagtctaaaatccctaaagtctaaaatcccaaaaattcacacaggatggttgcatcat
gttaggcagaactgttattttcttattgtctttatgcagaaaaaatggattttaattgaatccccaaacc
ataatgacagatttggaattaggtgcgatcaaggcttctaaaagtgaatttcaaggtgttaccaataaag
tttgtttttttccattcagcccaatgcatttggtggaaaattcagatgagtggattggccatgcgatacg
gcaacgacgaaaacttcagtttaaaaatgcgtcatttgcctgcattggcattccttccagctgatgacat
tccgggagcttttaatgaattaaagccgcatttgcctgaagaagtcagcgaagttactgactggttcgaa
aataattatgtgcacggtaggataagaagacacttacacaacggtgttgccgttcgattaccagtattgt
ttctaccaaatttgtggtctgtatatgagtgcatgcagaatggatttctatatacccaaaacaacataga
agcatggcacagaagatgggaaaatttaatagggaatgctcatgtcggtgtatatcgaatcagaagattc
aaaaagagcagcgccacgtagaaaatgaatgtgaacatattctccgaggagagccatgtcctaaaagaaa
aaaaaaagcagctattcatcgcgatgcaagacttcaaaatatagttaatgatcgtgaaagtcggccagct
cttatggactatctccgtgcaattgcccataatctatccctgtaatatactttttcatatgtcgaatttt
ctttttagttttttttcactattttaaattgtcagcattattttttacaattcgctatgctatgtatttc
atcttcgcatcatttccaatactggaggtataaattgtgtaaagacttttagagagttctaattcgtttt
atgcattttttgcaaatttgactccacgaaagtgcattatcacaacgttgactttgtgtgtaagcattgt
gcgtgtacgtaaaaacgttgaaacttcctcaataaatgaagagatgtcctttttgtacatctgcatttgt
gaaagataaaatttctcgagatctcggctctttgggcgactgcatatgcagtggtgacccatcgcggttt
ttgatcgatctcgtcaaaagacttaggttgttcgtcacggtatttcagatgaccgcagttataaagctgg
gtgcacacaattaccaaccatagtgatatgcgtttatacatttccctttttgacctatttctttatgaat
acggttcgtctgctcataactgttatacccgtgcgactgtcattagtatacctgagtgtttatgcttgca
aaaatatgtatgttattattgcctattttattgtgtaaagtggcctatgaagtgttctgtcatgttttta
tatgtttctcaaataaatccccttttaaaaatgtaaataaatatcttttaaaaaatttttaaattatttt
ttccagaattatatttttgggattttgatctttcgggatttcaacattcgggattatggcgttcgggatt
gtgtctttcgggattatgatcggctccc
