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CC                                                                *
CC   REPBASE UPDATE                                               *
CC   (C) 1997-2000  Genetic Information Research Institute        *
CC   All rights reserved                                          *
CC                                                                *
CC   A REFERENCE COLLECTION OF INVERTEBRATE REPETITIVE SEQUENCES  *
CC   RELEASE 4.0.3; MAY 2000                                      *
CC                                                                *
CC   Past support: DOE grant DE-FG0395ER62139                     *
CC   Current support: NIH grant 1 P41 LM06252                     *
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CC **************************************************************** 
XX
ID   AFRP1     repbase; DNA; INV; 118 BP.
CC   AFRP1 DNA
XX
AC   M30506;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   A.formosa repetitive sequence.
XX
KW   Repetitive sequence, AFRP1
XX
OS   Acropora formosa
CC   A.formosa (staghorn coral) DNA, clone pJCAF10.
OC   Eukaryota; Animalia; Eumetazoa; Cnidaria; Anthozoa; Zoantharia;
OC   Scleractinia; Astrocoeniina; Acroporidae.
XX
RN   [1]
RP   1-118
RC   [1]  (bases 1 to 118)
RA   McMillan J., Miller D.J.;
RT   "Nucleotide sequences of highly repetitive DNA from scleractinian
RT   corals";
RL   Gene 83, 185-186 (1989)
XX
DR   GENBANK; M30506; 77.0.
CC   Positions       1     118  Accession No M30506        GenBank (rel. 77.0)
XX
SQ   Sequence 118 BP; 33 A; 23 C; 23 G; 39 T; 0 other;
     gatcgacaag ttttggtggt ttttcagcca atgccatact ttttgcaaca tttttctaaa        60
     aattgggtca aaaccctagt gcacggtact ttgcacaaaa agttgcttat ctcgagga         118
//
ID   AGRP1     repbase; DNA; INV; 871 BP.
CC   AGRP1 DNA
XX
AC   L11898;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Mosquito repetitive sequence.
XX
KW   Repetitive sequence, AGRP1
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (strain Pink eye) adult DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Culicidae; Anophelelinae.
XX
RN   [1]
RP   1-871
RC   [1]  (bases 1 to 871)
RA   Reiss R.A.;
RT   "A study of repetitive DNA elements in the malaria vector, Anopheles
RT   gambiae";
RL   Thesis (1991)
XX
RN   [2]
RP   1-871
RC   [2]  (bases 1 to 871)
RA   Reiss R.A., MacIntyre R.J., Hagedorn H.H.;
RT   "A repetitive element of the Malaria vector, Anopheles gambiae";
RL   Unpublished (1993)
XX
DR   GENBANK; L11898; 77.0.
CC   Positions       1     871  Accession No L11898        GenBank (rel. 77.0)
XX
SQ   Sequence 871 BP; 263 A; 209 C; 213 G; 186 T; 0 other;
     ctcgagcaaa ccagagaggc gtacggaccg acacgaaagt tttaccaagc gatacgaggt        60
     caccgaaaca acgttgtacc taaggtaacc tgctgtcgca acaaggatga agatctggtt       120
     agtaaccatc cagaggtcct cttgcgatgg gctcagtact ttgatgaatt actcaacgac       180
     tagttcaacg agcagctaga agcgcactag ccgatagtgt catgcactgc cacctagagg       240
     aaacacaaag gcataccgtc ggctgaaaaa tccaccggca cccggaaccg accggaattg       300
     cagcgaactg gtcaagaatg gaggtgcacg acgtagaaaa cgaagtaatc atcattactg       360
     aggtgtggga tagcgaatcg atgccttgtg actggatctc ggcatcatgt accccatata       420
     caagaaggga gacaggttgg actgcaacta caggggtatt acgatgttga ttaccgcgta       480
     taaaatattc tccctgatcc ttcagtatcg ccttgtcccg cacgtcgaag agatagtagg       540
     aaactatcaa agaggattcc gaaacggaaa atctaccatt gatcagatct tcaccatgcg       600
     acagatcttg gagaagatgg ctgaatacag acacgacaca taccaactct tcattgactt       660
     caaagtcgca tatgatagca tagcctgggt aaaactatac gacgctatga gctcatttgg       720
     aatcccggcc aaactgataa ggctagttag aatgactatg accaacgtca catgccaggt       780
     gagggtggat ggaaaactct caggaccttt ttgccaggct tgcctgtctc ctattcaacc       840
     tggcgctaga gagggccatc cgcgactcga g                                      871
//
ID   BAMHI_AL  repbase; DNA; INV; 677 BP.
CC   BAMHI_AL DNA
XX
AC   M35399;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   A.lumbricoides BamHI repetitive DNA.
XX
KW   BamHI repetitive sequence, ALBAMH1
XX
OS   Ascaris lumbricoides
CC   A.lumbricoides DNA, clone AL700-1.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditia;
OC   Ascaridida; Ascaridina; Ascaridoidea; Ascarididae.
XX
RN   [1]
RP   1-677
RC   [1]  (bases 1 to 677)
RA   Warren T., Pasternak J.J.;
RT   "A related moderately repetitive DNA family in the nematodes Ascaris
RT   lumbricoides and Panagrellus silusiae";
RL   Nucleic Acids Res. 16, 10833-10847 (1988)
XX
DR   GENBANK; M35399; 77.0.
CC   Positions       1     677  Accession No M35399        GenBank (rel. 77.0)
XX
SQ   Sequence 677 BP; 186 A; 158 C; 161 G; 172 T; 0 other;
     ggatccgagt aagtgtgcaa aaacagcatt atttatgtaa acgaagctca attacatttc        60
     taagtgcaat tacggctgta tcacgggttg gcaactccat attccacgga aatccaccca       120
     ttcaacgggt gcaattcccg tgagtatcgt aaaataggag agtgaaagct cagaatgcgg       180
     ctagaatgtg tcatcttgtt gccaaatcgg agatatgtat cgtgtgaatt gacatgtatc       240
     atgccaaggt aggtcggaaa ggccaaagaa aagcggaaac cagacggtcg gaaagtacag       300
     aactcgattc ttgcgattgt gcatcttcga gttctggtaa gtgtaaatgc gagtccggtg       360
     tctgatcgga tctgatcggc cagtgccgag gcttacacgt gactatcaca tagtctcact       420
     ctttcactct tcccttttcg cgatttccga ttcagtgcta acaactcgac gtagacaccc       480
     cactctttct cctgcgcatt cctatgccgg tcaccgattg ggtcgcaaaa tgccaaagga       540
     cagggcatgt aagcccgcat cttaattgtt aagattcacc gatgaatcgt caaaaatttt       600
     gcaaaagcta gtggaaaacg gggttttgag gcccgttcca ccggcaaacc gtcatcgtgc       660
     gccgatcaga tggatcc                                                      677
//
ID   APAIA_ME  repbase; DNA; INV; 179 BP.
CC   APAIA_ME DNA
XX
AC   X61120;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   M.edulis ApaI repetitive DNA sequence.
XX
KW   ApaI repetitive DNA family; highly-repetitive sequence, APAIA.
XX
OS   Mytilus edulis
CC   Mytilus edulis
OC   Eukaryota; Animalia; Eumetazoa; Mollusca; Bivalvia;
OC   Isofilibranchia; Mytiloida; Mytilaceae; Mytilidae.
XX
RN   [1]
RP   1-179
RC   [1]  (bases 1 to 179)
RA   Cornudella L.;
RT   "Direct Submission";
RL   Submitted (30-JUL-1991) L. Cornudella, Centro de investigacion Y,
RL   Desarrollo del Csic, Jordi Girona 18-26, 08034 Barcelona, SPAIN
XX
RN   [2]
RP   1-179
RC   [2]  (bases 1 to 179)
RA   Ruiz-Lara S., Prats E., Sainz J., Cornudella L.;
RT   "Cloning and characterization of a highly conserved satellite DNA
RT   from the mollusc Mytilus edulis.";
RL   Gene 117, 237-242 (1992)
XX
DR   GENBANK; X61120; 77.0.
CC   Positions       1     179  Accession No X61120        GenBank (rel. 77.0)
XX
SQ   Sequence 179 BP; 43 A; 54 C; 33 G; 49 T; 0 other;
     gggcccgtct ggccaccaca gaggttcaaa gttgcccatt tacgtatttt ccatatcaac        60
     cacacattcg gtactcttcg gcatatccct acggcaaagt tccgaaccgg acctagctca       120
     ttttaaaggt attgacccaa gctattcccc acttaaatat ttttctggga tccgggccc        179
//
ID   APAIB_ME  repbase; DNA; INV; 167 BP.
CC   APAIB_ME DNA
XX
AC   X61119;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   M.edulis ApaI repetitive DNA sequence.
XX
KW   ApaI repetitive DNA family; highly-repetitive sequence, APAIB.
XX
OS   Mytilus edulis
CC   Mytilus edulis
OC   Eukaryota; Animalia; Eumetazoa; Mollusca; Bivalvia;
OC   Isofilibranchia; Mytiloida; Mytilaceae; Mytilidae.
XX
RN   [1]
RP   1-167
RC   [1]  (bases 1 to 167)
RA   Cornudella L.;
RT   "Direct Submission";
RL   Submitted (30-JUL-1991) L. Cornudella, Centro de Investigacion Y,
RL   Desarrollo del Csic, Joedi Girona 18-26, 0834 Barcelona, SPAIN
XX
RN   [2]
RP   1-167
RC   [2]  (bases 1 to 167)
RA   Ruiz-Lara S., Prats E., Sainz J., Cornudella L.
RT   ;
RL   Unpublished
XX
DR   GENBANK; X61119; 77.0.
CC   Positions       1     167  Accession No X61119        GenBank (rel. 77.0)
XX
SQ   Sequence 167 BP; 47 A; 38 C; 25 G; 57 T; 0 other;
     gggccctttt ttggccccta attcctaaac tgttgggacc aaaactccca aaatcaatcc        60
     caaccttcct tttgtggtca taaaccttgt gtttaaattt catagatttc tatttactta       120
     tactaaagtt atggtgcgaa aaccaagaat aatgcttatt tgggccc                     167
//
ID   ARS_EH    repbase; DNA; INV; 126 BP.
CC   ARS_EH DNA
XX
AC   M55340;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   E.histolytica autonomously replicating sequence (ARS) repeat
DE   region.
XX
KW   Autonomously replicating sequence; tandem repeat;
KW   Repetitive sequence.
XX
OS   Entamoeba histolytica
CC   Entamoeba histolytica DNA.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina;
OC   Rhizopoda; Lobosa; Gymnamoeba; Schizopyrenida; Tubulina;
OC   Entamoebidae.
XX
RN   [1]
RP   1-126
RC   [1]  (bases 1 to 486)
RA   Lohia A., Haider N., Biswas B.B.;
RT   "Characterisation of a repetitive DNA family from Entamoeba
RT   histolytica containing Saccharomyces cerevisiae ARS consensus
RT   sequences";
RL   Gene 96, 197-203 (1990)
XX
DR   GENBANK; M55340; 77.0.
CC   Positions     103     228  Accession No M55340        GenBank (rel. 77.0)
XX
SQ   Sequence 126 BP; 84 A; 0 C; 11 G; 31 T; 0 other;
     aataataaag ataataaaga taataaagat aataataaag ataataataa agataataat        60
     aaagataata ataaagataa taataaagat aataataaag ataataataa agataataat       120
     aaagat                                                                  126
//
ID   ASSAT1    repbase; DNA; INV; 123 BP.
CC   ASSAT1 DNA
XX
AC   V00084;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Ascaris suum satellite DNA variant.
XX
KW   Repetitive sequence; satellite DNA, ASSAT1.
XX
OS   Ascaris lumbricoides (nematode)
CC   nematode
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditia;
OC   Ascaridida; Ascaridina; Ascaridoidea; Ascarididae.
XX
RN   [1]
RP   1-123
RC   [1]  (bases 1 to 123)
RA   Streeck R.E., Moritz K.B., Beer K.;
RT   "Chromatin diminution in Ascaris suum: nucleotide sequence of the
RT   eliminated satellite DNA";
RL   [Nucleic Acids Res. 10, 3495-3502 (1982)
XX
DR   GENBANK; V00084; 77.0.
CC   Positions       1     123  Accession No V00084        GenBank (rel. 77.0)
XX
SQ   Sequence 123 BP; 45 A; 24 C; 18 G; 36 T; 0 other;
     tgatcaatta ttcccttcca gatgataatg aaataattct caaattgcat gaataatgca        60
     ttataaatgt cctttatcgt gacacaagaa ccgatgatct ggatccaact cgacggcaaa       120
     taa                                                                     123
//
ID   ALSAT2    repbase; DNA; INV; 603 BP.
CC   ALSAT2 DNA
XX
AC   K00079;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   A.lumbricoides eliminated chromatin satellite.
XX
KW   Repetitive sequence; satellite repetitive element, ASSAT2.
XX
OS   Ascaris lumbricoides
CC   ascaris lumbricoides var. suum (ascaris suum) spermatid dna.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditia;
OC   Ascaridida; Ascaridina; Ascaridoidea; Ascarididae.
XX
RN   [1]
RP   1-603
RC   [1]  (bases 1 to 603)
RA   Mueller F., Walker P., Aeby P., Neuhaus H., Felder H., Back E.,
RA   Tobler H.;
RT   "Nucleotide sequence of satellite DNA contained in the eliminated
RT   genome of Ascaris lumbricoides";
RL   Nucleic Acids Res. 10, 7493-7510 (1982)
XX
DR   GENBANK; K00079; 77.0.
CC   Positions       1     603  Accession No K00079        GenBank (rel. 77.0)
XX
SQ   Sequence 603 BP; 173 A; 95 C; 117 G; 218 T; 0 other;
     ggcctttttt gtgcattatt tctgcaattg ggatttattc gatgatcaat tataaaggaa        60
     taattaatca ttctgctgtc aaatttgatg cagttcagcc gaacttgtac cacgataaaa       120
     cgcatttttt gtgcattatt gctgcaattc ggatttattc gatgatcaat tataaaggaa       180
     taattaatca ttttgctgtc aaattcgatg cagttcagcc gaacttctac cacgataaag       240
     ggcatttttt gtgcattacc gctgcaattg ggatttattc gatgatcaat tgcatgggaa       300
     taattgatca ttttgatgtc aaatttgatg cagttgagcc gaacttgtac cacgatcaag       360
     ggcatttctt gtgcattatt gctgcaattg ggatttattc gatgatcaat tataaaggaa       420
     taattaatca ttttgctgtc aaattcgatg cagttcaacc gaacttgtac cacgataaag       480
     ggcatttttt gtgcattgtt gctgcaattg ggatttattc gatgatcgat tgcatgggaa       540
     taattaatca ttttgatgtc aaatttgatg catttcagcc gaacttgtat tacgataaag       600
     gcc                                                                     603
//
ID   LINE_BG   repbase; DNA; INV; 1956 BP.
CC   LINE_BG DNA
XX
AC   X60372;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   B. glabrata 'Line-like' repeat.
XX
KW   Line-like repetitive element, BGLINE.
XX
OS   Biomphalaria glabrata
CC   Biomphalaria glabrata
OC   Eukaryota; Animalia; Eumetazoa; Mollusca; Gastropoda; Pulmonata;
OC   Basommatophora; Planorbidae.
XX
RN   [1]
RP   1-1956
RC   [1]  (bases 1 to 1956)
RA   Knight M.;
RT   "Direct Submission";
RL   Submitted (20-AUG-1991) M. Knight, Biomedical Research Institute,
RL   Schistosomiasis Group, 12111 Parklawn Drive, Rockville MD 20852,
RL   USA
XX
RN   [2]
RP   1-1956
RC   [2]  (bases 1 to 1956)
RA   Knight M., Miller A., Raghavan N., Richards C., Lewis F.;
RT   "Identification of a repetitive element in the snail Biomphalaria
RT   glabrata: relationship to the reverse transcriptase-encoding
RT   sequence in LINE-1 transposons.";
RL   Gene 118, 181-187 (1992)
XX
DR   GENBANK; X60372; 77.0.
CC   Positions       1    1956  Accession No X60372        GenBank (rel. 77.0)
XX
SQ   Sequence 1956 BP; 639 A; 450 C; 411 G; 456 T; 0 other;
     gatccaacaa taccgacaaa agaggtcgta tgactggagg atatcttcct tcaacatgat        60
     ttctgcatac ttaatgatgc atcaccgacc tacttgcacc caggaactgg atcactcaca       120
     tgcattgacc tcaccgtatt gcgtccccga acttctggac gattttaaat ggtcagttag       180
     caatgatcta cggggaagtg atcacttccc aatcatcatt actaacaatc tcccttcatt       240
     gggacgacct cagcggtgga aactaaataa ggccgattgg gaacaattcc aaaaaagatg       300
     ctccgaggat atcacagaaa atatcctcca tgaacagaac ccagctgata cctttgctag       360
     caagctacta agtatagcca ggaaagttgt acccctaacc tctgcaaatc caaaacggcc       420
     tagcaaacta tggtttgatt cagcttgcaa aagtgctatt ggcgatagga aaaaacgact       480
     ggctgcattt ataaagaatc cttcccagga aaacctaaag ctattcagga tagctagagc       540
     aaaggctaga caaaccatac ggtcagccaa aaggaattcc tggagaagtt ttgtcggcag       600
     tctggatgtc caaaacttct gtcagagcgg tttggaaggc agtaaggcga atcaaaggga       660
     aagaatcaaa tgcatagggc atttgaaaaa ccaaggagcc aacctgtcac ttcccccaga       720
     gaaaatagct gactgccttg catccacagc acactacacg ccagagttcc aaaaattcaa       780
     aaccagggag gaaagacacc ccattgattt caggtcagag aacaatgaag actacaacaa       840
     accgttctcg cttgaggaac tgagggaatc gctggacaag tcacatgaca cagcgcctgg       900
     agaagacgaa atccattacc agttcctcaa gcaccttccc gaaccctcat tggcagtcct       960
     gctaggggtc tataattgtg tgtggcaaac aggcgctttc ccaaacagct ggaggaaagc      1020
     cacagttata ccgataccta aaccgggaag agacggctct gacccagcta actatcgacc      1080
     aatagcacta acaagctgca tctgcaaaac catggaaaga atgattaaca gtaggctggt      1140
     ctggtacctg gaaaggaata aagtgatctc aaactaccag tgcggattcc ggcaggggcg      1200
     gacaacaact gaccacctgg taaggctgga agcttatatt agaaatgcat tactcagaag      1260
     agaacatcta gtagctgtat tcttcgatat agaaaaggcc tatgacacaa cctggaaaca      1320
     tggcattcta cgtgacctgg cgcgtatggg gcttaaggga cacctccccc gttttgtgga      1380
     ggaattcctg aaagatcgaa aatttcaggt tcgagtgggc aactccactt ctgacactca      1440
     tgaccaggaa atgggtgtat cccagggcag cattctgtca gtcaccatgt tcaacattaa      1500
     aataaatagc atcataaatg cgctgtcccc tggcatagag tgctctttgt atgttgatga      1560
     ctttgtcatt cttacttatg ggaaaaacat gaacacctta gaaagaaaat tacagttatg      1620
     tttaaacaaa attcagggtt gggcaaagta taatggtttc aaattctcag actccaaaac      1680
     agttagtatg catttttgta atctaagggg actccaccta aaccctgaac tatttataca      1740
     caaaaagaag atccctgtcg taaaaactac aaaattttta ggcctcacct tagattccaa      1800
     atttaatttt ctcccttaca ttaaggaact taagaagaaa ggccaaaagt cattaaacat      1860
     actaagagta ctcagccata cggattgggg agctgacaga gataccttgc tgctgctcta      1920
     tcggagtcta attcgatcca agctagacta cggatc                                1956
//
ID   BLTR_SS   repbase; DNA; INV; 276 BP.
CC   BLTR_SS DNA
XX
AC   X70645;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   S.soubrense B LTR (long).
XX
KW   Interspersed repeat; putative transposable element;
KW   repetitive sequence; BLTR.
XX
OS   Simulium soubrense 'B'
CC   Simulium soubrense 'B'
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Simuliidae.
XX
RN   [1]
RP   1-276
RC   [1]  (bases 1 to 1370)
RA   Flook P.K.;
RT   "Direct Submission";
RL   Submitted (19-JAN-1993) P.K. Flook, Zoologisches Institut der
RL   Universitaet Basel, Rheinsprung 9, 4051, Basel, SWITZERLAND
XX
RN   [2]
RP   1-276
RC   [2]  (bases 1 to 1370)
RA   Flook P.K.
RT   ;
RL   Unpublished
XX
DR   GENBANK; X70645; 77.0.
CC   Positions     366     641  Accession No X70645        GenBank (rel. 77.0)
XX
SQ   Sequence 276 BP; 96 A; 42 C; 42 G; 96 T; 0 other;
     gagctttttg agctttcatc gtgtggtgag gctgagtcag caatttttta atgaaagtta        60
     gatggcgcgg tagataaagt tttcaatagg gtaaacgtga gcaagatgaa tcatattatc       120
     aaaatattta gtaaacatac aaacaaacat attcaaactc aaatacctga tgaaattatt       180
     ttaaaaattt tcaagtactt tttctatcaa tgatccaatt taccccaatt ttaccataga       240
     caattgcgct tttcgagctt tttcataaaa actttt                                 276
//
ID   BM1       repbase; DNA; INV; 445 BP.
CC   BM1 DNA
XX
AC   X03547;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Bombyx mori Bm1 repetitive DNA element.
XX
KW   Bm1 repetitive sequence; repetitive sequence.
XX
OS   Bombyx mori
CC   Silk moth
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Ditrysia;
OC   Bombycoidea; Bombycidae.
XX
RN   [1]
RP   1-445
RC   [1]  (bases 1 to 445)
RA   Adams D.S., Eickbush T.H., Herrera R.J., Lizardi P.M.;
RT   "A highly reiterated family of transcribed oligo(A)- terminated,
RT   interspersed DNA elements in the genome of Bombyx mori";
RL   J. Mol. Biol. 187, 465-478 (1986)
XX
DR   GENBANK; X03547; 77.0.
CC   Positions       1     445  Accession No X03547        GenBank (rel. 77.0)
XX
SQ   Sequence 445 BP; 126 A; 96 C; 104 G; 119 T; 0 other;
     gaactcgtcg tggcctaaag gataagacgt ccggtgcatt cgtatatagc gatgcaccgg        60
     tgttcgaatc ccgcaggcgg taccaatttt tctaatgaaa tacgtactca acaaatgttc       120
     acgattgact tccacggtga aggaataaca tcgtgtaata aaaatcaaac ccgcaaaaat       180
     tataatttgc gtaattactg gtggtaggac ctcttgtgag tccgcacggg taggtaccac       240
     cgccccgcct atttctgccg tgaagcagta atgcgtttcg gtttgaaggg tggggcagcc       300
     gttgtaacta tactgagacc ttagaactta tatctcaatg tctgtggcgc atttacgttg       360
     tagatgtcta tgggttccag taactactta acaccaggtg ggctgtgagc tcgtccacac       420
     atctaggcaa taaaaattaa aaaaa                                             445
//
ID   BM2A      repbase; DNA; INV; 318 BP.
CC   BM2A DNA
XX
AC   X70929;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Bm2a repetitive element.
XX
KW   Repetitive sequence.
XX
OS   Bombyx mori (silkworm)
CC   silkworm.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa/Eumycota group;
OC   Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Neoptera; Holometabola; Lepidoptera;
OC   Ditrysia; Bombycoidea; Bombycidae; Bombyx.
XX
RN   [1]
RP   1-318
RC   [1]  (bases 1 to 1009)
RA   Ichimura S., Mita K.
RT   ;
RL   Unpublished
XX
RN   [2]
RP   1-318
RC   [2]  (bases 1 to 1009)
RA   Ichimura S.;
RT   "Direct Submission";
RL   Submitted (02-FEB-1993) to the EMBL/GenBank/DDBJ databases. S.
RL   Ichimura, National Institute of Radiological, Science, Anagawa
XX
DR   GENBANK; X70929; 89.0.
CC   Positions     274     591  Accession No X70929        GenBank (rel. 89.0)
XX
SQ   Sequence 318 BP; 79 A; 91 C; 73 G; 70 T; 5 other;
     cacacatcat tacggatcct cccgacccat taacggtgct tttaagtacc acaagcacca        60
     gtcaccgtcc tcgttgaacc cgtcgcttgc gacgaagggc ttgacgagcg aatgaaccca       120
     cagacacagc ccactgagtt tctcgccgga tcttctcagt ggntcgcgtt tccganccgg       180
     tagtatattc tgcgaagcgc tgcttttgct agggctagtg taagcaacac tccggtttga       240
     gccccgtgag ctcacctaca tgttagggcg antgnanaat cagcctctca agaccatcag       300
     cataggtagg aaaaaaaa                                                     318
//
ID   LINE1_BM  repbase; DNA; INV; 5158 BP.
CC   LINE1_BM DNA
XX
AC   D26009;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   LINE1 repeat family; retrotransposon.
XX
KW   LINE 1 repetitive sequence; non-LTR retrotransposon; BMLINE1.
XX
OS   Bombyx mori
CC   Bombyx mori (strain Gun-Ho x Shu-Gyoku) (library: Charon 4A) DNA,
CC   clone lambda BmT752.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata;
OC   Bombycoidea; Bombycidae.
XX
RN   [1]
RP   1-5158
RC   [1]  (bases 1 to 5294)
RA   Ogura T., Okano K., Tsuchida K., Miyajima N., Tanaka H., Takada N.,
RA   Izumi S., Maekawa H.;
RT   "A defective type of non-LTR retroposon is dispersed throughout the
RT   genome of the silkworm, Bombyx mori";
RL   Unpublished (1993)
XX
DR   GENBANK; D26009; 89.0.
CC   Positions     121    5278  Accession No D26009        GenBank (rel. 89.0)
XX
SQ   Sequence 5158 BP; 1181 A; 1584 C; 1189 G; 1204 T; 0 other;
     attaggagga ggaatctcac acccccgatt actctcttta gacaaaccat accctgggcc        60
     ccattccgat agaggcaccc gtcacgcgcg gacgtgctca tcgaccactc gatcgcccgg       120
     cctttgttcg cccggctttt gttagcccgg ccattgttcg cgcggcctgt gttcgtggta       180
     caccgccgac caagtgtttt cttggagttt tattgtttgg tttcctttgt tattctgtgt       240
     cgtggtacat ctgccgacaa actgtcttcc tggaagtgtt taattgtttt gtttcttttt       300
     gttatttctg ttttgttgtg atttttcttt gtcctgcaga atctgtgcca tcgcacctgt       360
     gtcatagacg ctcaggtcga gaagttggcc tcgccgcaag gcagagtgtt ttctatgacc       420
     ccagggtagc cccacctggc acgatagaca tcatggacgc tgtatttgcg gaatttctcc       480
     gcttcgctac ccaaagctca cttccgaagt ttcaggccct tcaaggccga tcacactgcg       540
     agccctctct cgtggactcc accgagctcg cttgctcctg cgtcgcctgt acctgcgtgc       600
     aaagcttctg catcgagcac cgagctcggc gggctgcgtc cgcgtcgcta tactggcgag       660
     taaaactgct gcgtcgtcgc gtggtcaccg ttccagcagc gcgatcatcc gcggcctccg       720
     tcgcgccgtc caaaacacct actcgtaggt cacctgcgcc cgctcctcgt cctccgactc       780
     tgactcggag atggaggtcg acctcgctcc cgcctcatcg acggatggat tcaccctagt       840
     gcaaaagggt aagaagcgtg cgcggagtct cgagctcccg cggccgctaa aattagcaaa       900
     gccgcgaacg cgtcgcgccc ccgccctcag actcccgttg cgcctccagc ccgtggccac       960
     tccgtcgccg cgtccggtgg cacaaaataa agcccagacc cctcccccgg taatccttca      1020
     agagaaggca gcttgggaac gagtttccct ggccttaagg ccaaaaatat caattttacg      1080
     aatgcccgta acctcgcgaa cggcattcaa attaaggttc gaacagacgt acgtatccat      1140
     agggcctctc ttcttacctc cgtaaggagc gtataagttt ccacacatat acgctccagg      1200
     aggagcgcga acttcgtgcc gttatacgtg gcatccctaa agagttggat agacgagctt      1260
     cggtcaaggc gaccttctcg aacaaggcta ccggttaact ccgtacaccg catgcacaca      1320
     ggccgcggaa gggagccata taatatggtt ctcgtcgcct ccagcctacc cccgagggta      1380
     agcaaatatt caacatccga acggtctgta gcctttccgg aatcgcagtc gaaaccccac      1440
     acaagaaagg cacacctagc agtgccataa ctgcaattat acgggcattc ttcccgtaac      1500
     tgtcacgcgc gctcccgatg cgctcaagtg cttaggcgat cacgcacggc cctatgcact      1560
     cgcgatcaaa aaaccgcgac aagaaccgcc tagctgcgtc ctgtgtcgaa cacagggtca      1620
     cccgcaaatt accgggatgc cccgagcccc gaaaataaat cgccgcgtcg ccgcaaaacc      1680
     gccgtccgag cttccgcgcc cagacatcaa agcctcggca ccctctgtgt cgcaggctaa      1740
     gccagcgttc gttccggcac cggtgcccag tgtctcggcc tgggcgaaac cgctgccgta      1800
     catgaacacg gctacaactc cctcctccgc gattcgtccc gcccccgcga ctcgtccctc      1860
     tcccgcgatt gcctccgaac cgtgtccgat caatctcgct ttagtgatcg acttctttca      1920
     gtcgatcaac tttgagcgcg ttaacgcttt ggcgacgcca ttcgcactgc caccacatca      1980
     caacacttta tcgccgttgt gcaagaatac gccgacgtat acgcgtcatt aaatacgtac      2040
     gtcctcccct cactccgccg gtaatcaatg gcgtatataa gtagaataaa gccctatccg      2100
     taacgatagg attttttaac gttacggtct cgcaaatcag cgtgatcagg tttctgactt      2160
     tttgcgtgac catcaaattg atatcttttt agtgcaggag accctactta agcccgcgcg      2220
     ccgtgaccct aaaatcgcca actataacat ggtcaggaac gacaggctct ctgctcgtgg      2280
     tggtggtacc gtcatttact atagaagagc cctgcattgc gtcccactcg atcctcccgc      2340
     gctcgctaat atcgaagcat cagtgtgccg aatctcactg acggacacgc gccgatcgta      2400
     tcgcgtccgt ttatcttcca ccggataaga tcgtctaagc agtgatatcg aggcgctgct      2460
     cggcataggg agctctgtca ttctggcggc gacctaatgt aacacatagt gaactcacac      2520
     acacaacccg atgcagcgct gacgcgttag tcgataatct cgccttcgat atcatcgctc      2580
     cgctaatccc gactcactac ccgctaaata tcgcgcatcg ccggatatac tcgacatagc      2640
     gttattaaaa aacgtaactc tgcgcttaca ctcgatcgaa gtagtttcag agttagattc      2700
     agaccaccgt cccgtcgtta tgaagctcgg tcgcgctccc gattccgttc ccgtcacgag      2760
     gactgtggtg gattggcaac acgtgggcat cagcctggct gaatctgatc caccatcgta      2820
     ccgtttagcc ggactctacc cgtctcctca ggataccgtg aagccataga catcttaacg      2880
     tcacacatca cctcgacatt agataggtca tcgaaacaag ttgtagcgga ggacttcctt      2940
     caccgcttca aattgtccga cgatattagg gaactcctta gagctaagaa cgctcgatac      3000
     gcgcctacga caggtatcct accgcggaaa atcgtattcg aatgcgtgcc ctacaacgcg      3060
     acgtaaagtc tcgcatcgcc gaagtccgag atgccagatg gtctgatttt cttagaagga      3120
     ctcgcgccct cccaaaggtc ttactaccgc ttagctcgta ctcttcaaat cggatacggt      3180
     agtaactatg cccccctcgt aggcccctca ggccgactca cggcgttcga tgatgacgaa      3240
     aaagcagagc tgctagccga tacattgcaa acccagtgca cgcccagcac tcaatccgtg      3300
     gaccctgtgc atgtagaatt agtagacagt gaggtagaac gagagcctcc ttgcaccctc      3360
     tgatgtgtta ccacccgtca ccccgatgga agttaaagac ttgatcaaag acctacgtcc      3420
     tcgcaaggct cccggttccg acggtatatc caaccgcgtt attaaacttc tacccgtccc      3480
     actcatcgtg atgttggcat ctattttcaa tgccgctatg gcaaactgta tctttcccgc      3540
     ggcgtggaaa gaagcggacg ttatcggcat acataaaccc ggtaaaccaa aaaatcatcc      3600
     gacgagctac cgccgattag cctcctcatg tctctaggca aactgtatga gcgtctgctc      3660
     tacaaacgct cagagacttc cgtctcatcc aagggcattc tcatcggtga acaattcggg      3720
     ttccgcacaa atcactcatg cgttcaacag gtgcaccgcc tcacggagca cattcttgta      3780
     gggcttaatc gaccaaaacc gttatacacg ggagctctct tcttcgacgt cgcgaaaagc      3840
     gttcgacaaa gtctggcaca acggtttgat tttcaaacta ttcaacatgg gtgtgccgga      3900
     tagtctcgtg ctcatcatac gggacttctt gtcgaaccgc tcttttcgat atcgagtcga      3960
     gggaacccgt tcctccccac gacctctcac agctggagtc ccgcaaggct ctgtcctctc      4020
     accctcctat ttagcttatt cgttaacgat attccccggt cgccgccgac ccatttagct      4080
     ttattcgccg acgacacgac tgtttactat tccagtagaa acaagtccct aatcgcgaag      4140
     aagcttcaga gcgcagccta gccctaggac agtggttccg aaaatggcgc atagacatca      4200
     acccagcgaa aagtactgcg gtgctctttc agaggggaag ctccacacgg atttcctccc      4260
     gtattaggag gaggaatctc acacccccga ttactctcgt tagtcaatcc ataccctggg      4320
     ccaggaaggt caagtacctg ggcgttaccc tggatgcatc gatgacattc cgcccgcata      4380
     taaaatcggt ccgtgaccgt gccgcgttta ttctcggtag actctacccc atgatttgta      4440
     agcggagtaa aatgtccttc ggaacaaggt aacactttac aaaacttgca taaggcccgt      4500
     catgacttac gcgagtgtgg tgtcgctcac gcggcccgca cgcacatgga cacccttcaa      4560
     tctctacaat cccgcttttg cgggttggcc gtcggagctc ccgtggttcg tgaggaacgt      4620
     tgacctacac gacgacctgg cctcgaatct atacagaaat acatgaagtc agcgtcggaa      4680
     cggtacttcg ataaggctat gcgtcatgat aatcgcctta tcgtagccgc cgctgactac      4740
     tccccgaatc ctgatcatgc aggagccagt caccgtcgac gccctagaca cgtccttacg      4800
     gatccatcag atccaataac cttcgcacta gacgccttcg ctctaggagc aggcttaggg      4860
     acctcggtaa ccgtactcgt cgaactcgac aaagagttcg ccgtgcaacc taacccatga      4920
     atcagctcgc tgagtttctc gccggatctt ctcagcgggt cgcgattccg atccggtact      4980
     agattcattc gcgaagcagc tgctcttgag ctgttaggtc tccttcggag gcgctcgggt      5040
     agctgttagc aaatcccacc cctcctggct gagcctttgc tcgcccacct gtcctggtga      5100
     aactggaaag gcctccgggc caccagtaat ccttcaatca taaaaaaaaa aaaaaaaa        5158
//
ID   BMRP1     repbase; RNA; INV; 144 BP.
CC   BMRP1 RNA
XX
AC   X13869;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   B. mori silk fibroin repetitive sequence.
XX
KW   Repetitive element; BMRP1.
XX
OS   Bombyx mori
CC   Silk moth
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Ditrysia;
OC   Bombycoidea; Bombycidae.
XX
RN   [1]
RP   1-144
RC   [1]  (bases 1 to 324)
RA   Mita K., Ichimura S., Zama M., James T.C.;
RT   "Specific codon usage pattern and its implications on the secondary
RT   structure of silk fibroin mRNA";
RL   J. Mol. Biol. 203, 917-925 (1988)
XX
DR   GENBANK; X13869; 77.0.
CC   Positions      37     180  Accession No X13869        GenBank (rel. 77.0)
XX
SQ   Sequence 144 BP; 10 A; 26 C; 64 G; 44 T; 0 other;
     ggtgccggtg ccggttcagg tgctggtgct ggttcaggag ctggtgctgg ttcaggtgct        60
     ggtgctggtt caggtgctgg tgctggttca ggtgctggtg ctggttcagg agctggtgct       120
     ggttcaggtg ctggtgctgg ttca                                              144
//
ID   BMRP2     repbase; DNA; INV; 4126 BP.
CC   BMRP2 DNA
XX
AC   L08889;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Bombyx mori non-LTR retrotransposable element.
XX
KW   Non-long terminal repeat; repetitive element; BMRP2.
XX
OS   Bombyx mori
CC   Bombyx mori (strain 703) (library: lambda Charon 4) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata;
OC   Bombycoidea; Bombycidae.
XX
RN   [1]
RP   1-4126
RC   [1]  (bases 1 to 4126)
RA   Xiong Y., Eickbush T.H.;
RT   "Dong,a new non-long terminal repeat (non-LTR) retrotransposable
RT   element from Bombyx mori";
RL   Nucleic Acids Res. 21, 1319-1319 (1993)
XX
DR   GENBANK; L08889; 77.0.
CC   Positions       1    4126  Accession No L08889        GenBank (rel. 77.0)
XX
SQ   Sequence 4126 BP; 1713 A; 858 C; 649 G; 906 T; 0 other;
     gctagctccc taaaatccta ccttacgtcc gaggcgaaca tctgtccacg tggggagcgg        60
     aaacgcgtac tatcgaaact tacgcggcta acaaggtaaa ggtaacccat taatatggag       120
     acaagactaa aaagaaaatt gagagggccg cttcccgggg gcgatcgccg gggcacacct       180
     ggagctggcg ctgggtgttc cagcatagga tccgtcagcg gcggagagtt gagcaggcgg       240
     gctctcgccg gggatttaca acccgaaaat gctacagccg ccaacagaaa tcacgatgta       300
     gaaagtagga gcaatagccc atgtgaacct tacagcccga gtaccggttc atacaacccc       360
     tcggtacaat catcaccatc atcctcgggt catagaggct caccaacgtc gactatggat       420
     gttgcgcagg gggcgaatct ttttacctgc gtccaccaaa gctggcaaaa caaggggccg       480
     catgaaatgg agcagagaag taaacctatt tatcatgcgc acctactact acgtcactaa       540
     attagaaact gatctgacta tttacagaaa aaagctgcat gaacattttt cactaaaata       600
     ccctaatgta ataatttcac agcaaagaat atctgaccaa aaaagggcaa tagaaagaaa       660
     taaactacta tctcaagaaa ccctagaccg actaaaagag gaagtgagaa aacagctcga       720
     agacgaacaa accaataatg ttgaaaatga aaaattaaat tcagaaacat attcacacga       780
     atatacgaca cttactccac aaactatttt aacgaagaaa acacagcaac atacaaatat       840
     tatctctagc acacagacct ctcattcatc cactcaaacc gaatcaataa ctctgctgtt       900
     agaaaatgaa gtcgatattt taaatactaa ccccacagaa ggggcaacac agacacaaga       960
     agttaaagat aaatttgaaa cgaatttaac aatgtactca ggcatggacc ctaaagcaag      1020
     gccgccattg cctaaactta aatatagctc taagctaaat gaactgatac gtctatttaa      1080
     taatgacata cttgtagatt acatctcacc agacacacaa ctatcagatg tacatacatt      1140
     aacatattgc accgccgtaa ctatttcgga acaactaaaa tataaaatta tagcaataga      1200
     aggaaacgcg agacataaaa aaaacttcaa accaccgtgg caacaaagat tggagaagga      1260
     tatagcaaaa ttgagagcag atattggtaa actgacccaa tacataaata ataatagatc      1320
     taaaaaagta gtccaaagcg ttgaacaaat atttaaaaac actaaaatac acacatcaca      1380
     cgaaaatggc aataaaaaat ctcaagaatt tttagacaca ctgaaacaaa aattagctct      1440
     aaaagcccac agactaaaaa gatataacaa ctcacagaaa cgaaagaatg agaacactat      1500
     atttctaaca aatgaaaaac tattctacag aaacctaata aagccgaaaa ctgatcgaga      1560
     caatagtaat atagatatac caacagcaga acaattggaa atgtattggg ctaggttatg      1620
     ggaaaatagt gcaaaacata atgacaaagc aaattggatt actgaagaaa aagaaagatg      1680
     ggatacaata gaagaaatgc aatttgatga cgtgacagag gaagaaataa ctactataac      1740
     agctagacta cataactgga aatccccagg tatagataaa atccataatt tttggtttaa      1800
     aaaactaatt tgcttacaca aaacaatagc caaaaatcta acagatatta tctctggaaa      1860
     tcaaagtatt cccgaattca tagcgacagg aatcacttat atgataccaa aaggtgactt      1920
     ctctatagaa gcatcccaat atcgaccaat tacatgcctt ccgactattt acaaaatttt      1980
     aacaacagtt attacaaaga aaataaattc acatatagaa cacaataata tcttagctga      2040
     agaacagaaa gggtgtagac gaggccacat gggctgcaag gaacagctaa ttatagactc      2100
     aaccatcatg aaacacgcca ccacaaaaaa tagaaattta cactgtacat atattgacta      2160
     caaaaaagct tttgatagca tcccacattc atggctgatc caagtcctag aaatctacaa      2220
     aattaaccct ataataataa gcttcctacg caatatcatg acacattggc aaaccacact      2280
     taaattaaaa aaccctccta attttgtaac aacacgacaa atagccataa aaaagggtat      2340
     ttaccaaggt gattctctca gccctttgtg gttttgcctc gccttgaacc cactatccat      2400
     caattgcata atgaccgggc gggataccga ttaaacaaca agataacacc gaaacaataa      2460
     tatcacacct gatttatatg gacgacatta aattatacgc aaaaaatgac aaagaaatga      2520
     aaaagttaat agatactacc acgatattca gcaacgacat cagtatgcaa tttggacttg      2580
     ataaatgtaa aaccgtacat ataataaaag gaaaagtcca acccggtgat tatacaatag      2640
     atgacacaac acaatacggc gatggaacca agtgccttta taaatatctg ggctttcagc      2700
     agctcaaagg actcgatcat ataacaataa agcaatcatt aacttcagag tacaaaaaac      2760
     gtatcaatgc catttgcaaa acgaaattat ctggaaaaca tcttataaaa gcactgaaca      2820
     cctatgcaat acccattcta acctactcat ttggaataat aaatggagca aactgacata      2880
     gacaaataga acgaatacag gactacatac aaaaacacaa taatcttcat ccaaaatctg      2940
     caatagaaag attgacaatt aaaagacaag acgggggtag aggcatgata gatatttggc      3000
     atctatggcg taaacaaata cacagcttta aaaacatttt tctacataaa atcagattta      3060
     agtgaaattc acagagccat ggcacaaatg ataacaacta cacaccgcta aatctcaaac      3120
     aaaaagaact aatagataat acagaaaacc taagaaatag aaacccacaa aaagacatgg      3180
     aagaaaacag gaagaaaaaa gcgctacatg gacgacaccc tcatgaccta agccaatctc      3240
     acatagacag caaggcatca aacatgtggc tcaaaacagg aagtctgttc cccgaaacgg      3300
     aaggattttt aattgccata caggaccaag taataaacac aaaaaattac agaaaatata      3360
     ttattaaaaa gatccccact attagagacg ataaatgccg caaatgcaac acccagccag      3420
     aaacaataca gcacataact ggagcatgtt caacccttac acagacagat tacactcaca      3480
     gacacaacca acttgctaat attatccatc aacaactggc tctcaaacat aaattgatac      3540
     aaaatataaa cacaccgtac tacaattata aaccacaaac cgttcttgaa aatgactcct      3600
     gtaaacttta ttatgatcgc gctattctta ccgataggac gattcactac aatagaccgg      3660
     atatcacttt acaagataaa aacaataaag tcacctacat tattgacatt gcagtcccga      3720
     atacccacaa cattcaaaaa acgtttacag aaaagatgac aaaatacaca gaacttaaag      3780
     aagaaatagt tagaatttgg aaacagaaaa aagcatacat agtcccaata ataatctcaa      3840
     ccactggagt tgtcccaaac cacatccaca acagcttaaa gcttctagat ttaaaagata      3900
     acatatttat ttcactacaa aaggcagcta tcctaaatac atgcagaata gtgagaaagt      3960
     ttatgcagct tgaagaaaac caaacttact acacgcaata aaaactagca taattattaa      4020
     ctcataacta atgtatatta cttggccaaa agcccgtata tacagttcca ccggctctgt      4080
     cgacagactg aactgagaaa ggggaaacat atgtaaataa taataa                     4126
//
ID   BXSAT1    repbase; DNA; INV; 160 BP.
CC   BXSAT1 DNA
XX
AC   L09652;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Bursaphelenchus xylophilus satellite repeat.
XX
KW   Satellite repetitive element; BXSAT1.
XX
OS   Bursaphelenchus xylophilus
CC   Bursaphelenchus xylophilus (strain J10) DNA.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea;
OC   Diplogasteria; Aphelenchida; Aphelenchoidea; Aphelenchidae.
XX
RN   [1]
RP   1-160
RC   [1]  (bases 1 to 160)
RA   Tares S., Lemontey J.-M., De Guiran G., Abad P.;
RT   "Cloning and characterization of a highly conserved satellite DNA
RT   sequence specific for the phytoparasitic nematode Bursaphelenchus
RT   xylophilus";
RL   Gene (1993) In press
XX
DR   GENBANK; L09652; 77.0.
CC   Positions       1     160  Accession No L09652        GenBank (rel. 77.0)
XX
SQ   Sequence 160 BP; 43 A; 33 C; 28 G; 56 T; 0 other;
     ccggtgtcta gtataatatc agagtttttc gcccagtgtc ggcgtaattt gattccaaaa        60
     aagctgaaac ttgccatgct aaaatctcag gcgattagct ttcgaatggt gtatgtcttg       120
     tcaattcact ccgtcatcac taattcactt ttttttaaaa                             160
//
ID   C6_TC     repbase; DNA; INV; 1433 BP.
CC   C6_TC DNA
XX
AC   U16295;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   C6 interspersed DNA element.
XX
KW   Interespersed repeat.
XX
OS   Trypanosoma cruzi
CC   Trypanosoma cruzi.
OC   Eukaryotae; Hyperchondria; Prodisceans; Euglenozoans;
OC   Kinetoplastids; Trypanosomatidae; Trypanosoma.
XX
RN   [1]
RP   1-1433
RC   [1]  (bases 1 to 1433)
RA   Araya J.E., Cano M., Novak E., Guevara P., Ramirez J.,
RA   Franco da Silveira J.;
RT   "Characterization of a reiterated family of interspersed DNA
RT   elements in the genome of Trypanosoma cruzi";
RL   Unpublished
XX
RN   [2]
RP   1-1433
RC   [2]  (bases 1 to 1433)
RA   Araya J.E.;
RT   "Direct Submission";
RL   Submitted (25-OCT-1994) Jorge E. Araya, Escola Paulista de
RL   Medicina, Microbiology Immunology and Parasitology, R. Botucatu
XX
DR   GENBANK; U16295; 89.0.
CC   Positions       1    1433  Accession No U16295        GenBank (rel. 89.0)
XX
SQ   Sequence 1433 BP; 341 A; 358 C; 392 G; 342 T; 0 other;
     gaattccaac cgctgatgcg catttgttac gaaaggcagg aattatcgag gacgcttcgt        60
     ccagatacgg gcggatggat taataccttt ctcagttgtg gaggagaaaa ccaccggttt       120
     acgacgacga cgatggatcg cgtggccacg cgacaagaac agagacgccc ttacgaggcg       180
     aatgttcctc ttttacatat tccattatta ccgcctgtga tggcgaggcg cttctcttga       240
     ttaagcatcc cttttttaag tctctttacg cggagactcg gatctctttc gatgccacgt       300
     ggagtacggc tgcgctggtg gagtcgacac ggctcccaat ggatacaagg ccagccagaa       360
     attctccagt tattacttcc gacaattgcg ggggtgacaa cggtggttcg cccctctggg       420
     ccgcatcacc aatggtcgat cgacgtatga tcatatatac gcataacacg ggtcaaaaag       480
     cgatgtgata tcgtgggagg cccaagtgct ttgcaatgcg gacagttgtc acgcatccat       540
     gggggaagaa cgcgaatcgg gcgctacaca gtacaccttc ttggggtgca gtttgatcac       600
     acacaccggg cggtatccct gagtgacaag tttgtccgct ctgtacgcgc catgccggcg       660
     ttaattcttt gaccatcgcg gaaatggaga ttatgcgtca cgctttttgt acgcggctgc       720
     cattttgggc acgcgtttat gtgactacta cttttttatt aaggcagtgc gacgacgatt       780
     gtccgcactt aaccggggat tgtgcaggag acatccccgg cgaacctacg cctacagcgg       840
     ttggtttggg cgagagattg cgacacacca tcgacgataa tcgtaagcga aacagtcaag       900
     cccacggaga aggcatcggc tgccatcatc acacggcacg catcgctcca tgatgggagc       960
     cgtttttatt ccagacttcc ggcgacgtta aaattgccgg agaaaaatgg gagaggaagc      1020
     cttttcttat catgcaggcc gaggcacgtg cggtacgctt agccttatcg gccttttccg      1080
     ccattttgcc atccaccatg ggcgtttggg tggacaatac ttcgctgcaa ggagcggcga      1140
     ataaaggcag ctcaaaatca cacgcgttga cgtgggagct gcaacggata tacgagtttt      1200
     tggactctcg cggaatacag gcaacatttg cctacgtgcg gtctgcagaa aaccccgcag      1260
     acgatatcac gcggtcgtgt ttttacactt cagacttggc gaaggggtgg aacttccgaa      1320
     ggggagcggc ggggtcttgt ggttgtagga ccccaaagtc tgccacttcg taagtaataa      1380
     tattttcaaa tcctaactga ggacaaggac catgctaatg gtccacggaa ttc             1433
//
ID   CCRP1     repbase; DNA; INV; 187 BP.
CC   CCRP1 DNA
XX
AC   X04359;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Grasshopper repetitive sequence.
XX
KW   Repetitive sequence; CCRP1.
XX
OS   Caledia captiva
CC   Caledia captiva
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Orthoptera; Caelifera;
OC   Acrididea; Acridoidea; Acrididae.
XX
RN   [1]
RP   1-187
RC   [1]  (bases 1 to 187)
RA   Arnold M.L.;
RT   "The heterochromatin of grasshoppers from the Caledia captiva
RT   species complex";
RL   Chromosoma 94, 183-188 (1986)
XX
DR   GENBANK; X04359; 77.0.
CC   Positions       1     187  Accession No X04359        GenBank (rel. 77.0)
XX
SQ   Sequence 187 BP; 45 A; 42 C; 44 G; 56 T; 0 other;
     tcctttctcc taatcggctc ggtaatctgc cttcttaatt tgttacgtag catttcaacg        60
     agggtgctat acctatacaa agtttcataa ggcgcactct gacaggactg tagttacacg       120
     cccttgaata tagcagggaa ggtccgtgcc acgtgacgct ggaaatttta tcggttttcg       180
     gagagga                                                                 187
//
ID   CLAI_CT   repbase; DNA; INV; 112 BP.
CC   CLAI_CT DNA
XX
AC   M24188;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   C.thummi ClaI repeat.
XX
KW   ClaI repetitive sequence.
XX
OS   Chironomus thummi
CC   C.thummi thummi larva DNA, clone pCtt 1505-12.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Chironomidae.
XX
RN   [1]
RP   1-112
RC   [1]  (bases 1 to 112)
RA   Schmidt E.R., Godwin E.A., Keyl H.-G., Israelewski N.;
RT   "Cloning and analysis of ribosomal DNA of Chironomus thummi piger
RT   and Chironomus thummi thummi";
RL   Chromosoma 87, 389-407 (1982)
XX
DR   GENBANK; M24188; 77.0.
CC   Positions       1     112  Accession No M24188        GenBank (rel. 77.0)
XX
SQ   Sequence 112 BP; 50 A; 11 C; 13 G; 38 T; 0 other;
     tatatttttt tgaaaagagc ctactatgat cgaaaacaaa aaatgcttta aatagcattt        60
     taaaacatat ctggtattat aaatgataaa gaatgcaaat ttcgtataaa ta               112
//
ID   BR1_CP    repbase; RNA; INV; 286 BP.
CC   BR1_CP RNA
XX
AC   X06431;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Chironomus pallidivittatus BR1 gamma ( Balbiani ring) gene pCp20
DE   repeat constant region.
XX
KW   Repetitive sequence; CPBR1.
XX
OS   Chironomus pallidivittatus (midge)
CC   midge
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Chironomidae.
XX
RN   [1]
RP   1-286
RC   [1]  (bases 1 to 286)
RA   Wieslander L.;
RT   "Direct Submission";
RL   Submitted (21-DEC-1987) Wieslander L., Dep. of Molecular Genetics,
RL   Karolinska Institutet, 10401 Stockholm, Sweden.
XX
RN   [2]
RP   1-286
RC   [2]  (bases 1 to 286)
RA   Lendahl U., Saiga H., Hoeoeg C., Edstroem J.E., Wieslander L.;
RT   "Rabid and Concerted Evolution of Repeat Units in a Balbiani Ring
RT   Gene";
RL   Genetics 117, 43-49 (1987)
XX
DR   GENBANK; X06431; 77.0.
CC   Positions       1     286  Accession No X06431        GenBank (rel. 77.0)
XX
SQ   Sequence 286 BP; 123 A; 68 C; 61 G; 34 T; 0 other;
     accaagcaaa tcaggaccta gaccaagcca atcaggacct agaccaagca aatcaggacc        60
     taaaccaagc acatcaggac caagaccaag caaatcagga ccaagaccaa gcaaatcagg       120
     accaagacca agcaaatcag gacctagacc agagaaatgt ggtagtgcaa tgagaaaggc       180
     tgaagctgaa aaatgtgcca gaagaaaggg tagattcaat gcaaataaat gcagatgtac       240
     ctcagctggt aaaccaagca aatcaggacc tagaccaagc aaatca                      286
//
ID   BR6_CP    repbase; DNA; INV; 201 BP.
CC   BR6_CP DNA
XX
AC   K01695;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   C.pallidivittatus balbiani ring (BR6), secretory protein sp-Ic
DE   repetitive region.
XX
KW   Repetitive sequence; tandem repeat; CPBR6.
XX
OS   Chironomus pallidivittatus
CC   C.pallidivittatus mid-fourth-larval instar salivary gland cell DNA,
CC   clone pCp16.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Chironomidae.
XX
RN   [1]
RP   1-201
RC   [1]  (bases 1 to 201)
RA   Galler R., Rydlander L., Riedel N., Kluding H., Edstroem J.-E.;
RT   "Balbiani ring induction in phosphate metabolism";
RL   Proc. Natl. Acad. Sci. U.S.A. 81, 1448-1452 (1984)
XX
DR   GENBANK; K01695; 77.0.
CC   Positions       1     201  Accession No K01695        GenBank (rel. 77.0)
XX
SQ   Sequence 201 BP; 81 A; 38 C; 57 G; 25 T; 0 other;
     aaagagccta aatgcgatga tgaaatgaga gaaagggtca agagacgttg tgacaatgag        60
     aatcgccgat ttgacgcaag aagatgtgaa tgcggtgaga agaaacgtcc agaagataac       120
     gatgacgaag atcgcccaga acgtccagaa agacccgaaa gacctgaaag acctgaagaa       180
     ccagaacgcg agcccgaaag a                                                 201
//
ID   CRE1      repbase; DNA; INV; 3483 BP.
CC   CRE1 DNA
XX
AC   M33009;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   C.fasciculata retrotransposable element (CRE1).
XX
KW   Integrase; retrotransposable element; reverse transcriptase.
XX
OS   Crithidia fasciculata (c.fasciculata)
CC   C.fasciculata.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-3483
RC   [1]  (bases 1 to 3940)
RA   Gabriel A., Yen T.J., Schwartz D.C., Smith C.L., Boeke J.D.,
RA   Sollner-Webb B., Cleveland D.W.;
RT   "Rapidly rearranging retrotransposon within the miniexon gene locus
RT   of Crithidia fasciculata";
RL   Mol. Cell. Biol. 10, 615-624 (1990)
RX   MEDLINE; 90136575.
XX
DR   GENBANK; M33009; 89.0.
CC   Positions     416    3898  Accession No M33009        GenBank (rel. 89.0)
XX
SQ   Sequence 3483 BP; 776 A; 923 C; 1227 G; 557 T; 0 other;
     aacggcattc ggtctagtgg gtccactccc aaccttctcc tccttggtct cgggttcgat        60
     tccggtcggg cacgaaactc tcttcctctc taaactccac atatacatcc acaataacca       120
     ctctcataac tgttctggtg cggggccatt tcgaaccata ttgacatttg gcgcaccaaa       180
     ctcacacata ctaaccaaaa atggcagagc cacccggggc gacggtccga gcgtggcgga       240
     gcacctcaag cgccggcggg tcgaaggatc tgagccggtc gtggtggggt ctcgccagga       300
     gggtctctcc ggtgagtcag cagtcgaagc gattgttgtg gaaagtggca gcgaggctga       360
     cgaagaatcc acggcgaggg ggctgggagc ctctcgacaa gcgccaggtg atgactcggg       420
     cgggccggtg cccagggcgg aggaggacct cgccccggtt gggtacctgt atcccgagaa       480
     cctggccgtc ccacaggggg cggcgtgtcc ggtggtgggt tgtgggtacc gaccgaacac       540
     ccgggtggga ccgagactgg tggaacacct gaacacggtg caccgggata tcctgggcaa       600
     cattcctgtc gacgcctggc gacgtcaggg actcgtccgc tgcctacggt gtggctcggc       660
     cttgaccgcg tccggtcatg gtcggggtgc acacggtggg aagtgtggtc cgtacagaag       720
     cagaaacgcg gccattaggg ctcggacgca gagtttcttt ggtggaattt cgcagaattc       780
     tgacacactt acggcgggaa acggggtctc agaagctggt ggtctagtgg aagtgggtag       840
     ggtagaagac ccaaccacag acccgtggta cagggttcga acccccttga agcgacaaat       900
     ttaccgtacg gacttccggg tgtggcaggg cttggcccgg ccagtactcc tggggtactc       960
     tctggcggat acagcaggga aggagggacg ccttctcgcc ctgctcaatc tccccaggga      1020
     ccatctggag gtccaggtaa atgctaagag gggaatccaa ccacagccgg ctgaaatcga      1080
     ggcccaggtt cgaaggaagg tagtggagtt ggcagggata ggagcggtag gacgagcgat      1140
     ggcagtgatg actcgggggc ggctggtcga ggtgcccctg gagcgggtga tggagcagct      1200
     cgaggagctc cacccgcagg aggacccgcg gggttatccg gcagcaccag atacgagcga      1260
     ggtgctgcgg gccaaggagc agaaggtgcg gcgggcgatc gcggcacgga tggggagggg      1320
     tacggcgccc ggcctcgatg gctggacgcg ggagctcctc ctccccctcg cagaagaccc      1380
     ggccctgcta cacgagatca cgtcggtggt ctcggatatc atgcagggga aggtggccga      1440
     ggtggtggcg cggaggctgc ggagcagcgc cgtcaccccg attccgaagg acgaggcggg      1500
     gacgaagata cgcccgatcg tgccggagtc ggcctggctg aagctggcct cgctggtggc      1560
     gatggcggag ataccatcca gcttcaagga gaccttcaag gggtggcagt acggggtctg      1620
     gggggacgtc gccaaagcag tggcgaagat ccgccgggac agcgaggagc acgagtacct      1680
     ggtggcactc gacggggtca atgcatacaa tacgatgagc agggcccaca tcctccaagc      1740
     cgtgtacgcc gagcagcgcc tgaagccgat ctggggggtg gtgaaggtgg cgcttggggg      1800
     gccggggttc ctgggagtat acagggacgg ctgcctcaag ggcaacctgt ggtccaccaa      1860
     gggaatccgg cagggcatgg tgctgggccc cctcctgtac gcgaccggga tggcagcggc      1920
     catcgggccg gtacggcagc gtatccccgg ggtccccgtg acggcctaca tcgacgacat      1980
     caccctcgcg gccagcgggg cggagggagc cagggcagcc gaggcatacg cagacgccct      2040
     cgagacggtc ggggtggtca ccaacgccag gaagtcgatg gtggtggggc cagaaggcac      2100
     ccgggtgggg atcgggggtg tagacctgcc ggtggtggcc gaggcccgga tcctgggggc      2160
     ccacttccga gcaaggggga caccagaggc ccgtaccatc gagtggctgc aggcggccgt      2220
     cgagaagtgg cgacccatcc accagaagct gcggcaggac atcatcccga agaacattgc      2280
     gatgatgatg acccgcatca gcctggggtc caagatgacc ttcctcctcc agacccactc      2340
     gccacaggaa ctggagaccg cagcgaagac ggcagacgac gaggtcgagc agaccctcca      2400
     gcaccttatg gggcaggtag agatcacgcc ccgagcaagg ctgctggcac aactcccgat      2460
     cagagagggg gggctgggtc tccggcgaag cagcgagatt gcgaagttcg cacaggcaga      2520
     cgtggggcaa ggcgaggccc accaggcaca cacaaaggca ctagatgaag ggatcaagca      2580
     ccagttacaa ccactcctct cggagtccga ggtgcagatc ctgaagtcga acgctggaat      2640
     gggggccggg cgggtgctga cagatagtag cctgaggatc ccagacgtgg cagcaacaat      2700
     cgcgctgagg gagagactcc tgctcagggt gctcccggag ggatgcagtg tgtgtgtggg      2760
     ggggacgcga cgaactacca tgtacacacg tgctccaaca tacccaccaa gccccggacc      2820
     cgacgacacg acggggtggt ggatgagctg gtggccctgg ccaggaagat ggggtacgag      2880
     cccagcaagg agccgagggc ggacgttgac gagtagggcg aggccggacc tgtacatcac      2940
     aggaagcctg aagccggcgg cgacggatgt aacaataacc tacccgggca ggcaggcgag      3000
     gggagcacac tcccgttgca gcaggcctac cggaataaga tgggggcctg ggaggcatgg      3060
     gggaacctgc gaggggtgga catgcagccg gtggtcctcg ggacgaacgc ggagatacac      3120
     ccggagagtg cgaatggata cgaaggttga cctcggtcga agacaaagac aaaatacata      3180
     ccagttacaa cgaggtgacg ggacgaatcg tggagacggt gttggttggg aacgtggagc      3240
     tgttcaacgc agtgacgaac ctggcgctgg tcagggagtt gatgtaggaa ggtacgggtg      3300
     ggtagtagta gaatatcgaa cggcgactag gaagttggac cattgttact tgttacttgt      3360
     gattctgacg acgacgaaag attgttcctt gttacttgtt accctgaaat ttgatattac      3420
     ttgaattgat atgatatgat tgatacaaaa aaatttaaaa aaaaaaaaaa aaaaaaaaaa      3480
     aaa                                                                    3483
//
ID   CRE2      repbase; DNA; INV; 9595 BP.
CC   CRE2 DNA
XX
AC   U19151;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   C.fasciculata retrotransposable element (CRE2).
XX
KW   Integrase; retrotransposable element; reverse transcriptase.
XX
OS   Crithidia fasciculata
CC   Crithidia fasciculata.
OC   Eukaryotae; mitochondrial eukaryotes; Euglenozoa; Kinetoplastids;
OC   Trypanosomatidae; Crithidia.
XX
RN   [1]
RP   1-9595
RC   [1]  (bases 1 to 10053)
RA   Teng S., Wang S., Gabriel A.;
RT   "CRE2, a new site-specific non-LTR retrotransposon that interrupts
RT   the mini-exon genes of Crithidia fasciculata";
RL   Unpublished
XX
RN   [2]
RP   1-9595
RC   [2]  (bases 1 to 10053)
RA   Gabriel A.;
RT   "Direct Submission";
RL   Submitted (27-DEC-1994) Abram Gabriel, Molecular Biology and
RL   Biochemistry, Rutgers University, CABM 306, 679 Hoes Lane,
RL   Piscataway, NJ 08855, USA
XX
DR   GENBANK; U19151; 89.0.
CC   Positions     417   10011  Accession No U19151        GenBank (rel. 89.0)
XX
SQ   Sequence 9595 BP; 2578 A; 2732 C; 2699 G; 1586 T; 0 other;
     attctctttc tgctgccttt cttttccgcc aactgtccga cctataagca tccggtaaat        60
     aacacgggtc taacgtcgca cagtgcacac cgaacgtggt tctccgcacg cctctgcaca       120
     ccgagccctc cgacacaaca ggagagccgg ttgcacgagt gaagagcgcc gccgcgaggt       180
     gtagtaaaag aaataaataa ataaataaat aagcacacgc agtggccaca gtgaaccggc       240
     cactcgctaa ttattttcac aacacacacg cagcagctgc aaaggcgtgt ccttttcccc       300
     cccttttccc ttttcccttt tttttttttt tttttttttt tttttttttt tttttttttt       360
     taagacgaat ttttccgatt tttggcttta caaaattttt caacttgttg ttttgagcga       420
     tttgcacgaa aaagcgccat ataactaaaa tttttatttt tggaaaaaat cgaaattttg       480
     ttattattta acgcggcttg tgcagatttt aatcttggct ctcgggactt ttttgcggag       540
     ccgtcggcac tcgagaaatt tggttctgaa atttttagtt ttgttttttt gaccgctgaa       600
     tacgtccttt tgaggcagtt ctgggcctct ctaagttttg gttccccttt tattttagcc       660
     aaggaccgtt ttttggggtc cgttaaaggg ggagttggga ggtttgaggt cgatctgagt       720
     cacaaaccga aaagatacag ccaagtgtga gtagtaagtt tttgaaccgc tgggttggtt       780
     tttgaagttt ttggtagccg gagggcccgg gccttagggc aaaaaaaaaa aaaaaaaaaa       840
     aaaatggcta aaatgatgaa atacctaaag gaaaaaatgt gtctctccgg ggcggggagc       900
     aacagtcagg gtaaagaaaa aacgtccctg agggtgaggt gcgggcttcc cccggtgtac       960
     ccgcgagtcg ccgacgggag aacggaggaa ggcgagtttg tttttggtgg gaagaaacaa      1020
     ccggcagcaa ccacaccacc actgccgcca ctaacaacac agccgcaagg ttttcaggtg      1080
     acggcagaac tcgtagagca ggtgttgcgc atcctgcaga ccggtggcat ccccgtcccg      1140
     actccaccgc acacgggcac caccacacca gcgacgcatc agagcgaggc cccgccacaa      1200
     accggactag ccacgacccg cgacacccgc gccactgatc ggaagcaaac cccgcagcgt      1260
     ggcccacaag agccgaagcg agaggttccg acaccgcggc tagtagctcc acaaccgtct      1320
     gtgccaccag gcttccgtct ggtaccagca agggcctcga cgccaccacg ctggcaacgg      1380
     gaggcgactg cacaggccgc aaccacaaca ggcgcggcaa accgggtttc aacaccgcag      1440
     cagcgcacac ccaccacaag caggagtgca acaccacagc ccaacatcgc atcgccgagt      1500
     ggcgcaccac cgcgctacaa cgcaacaaga ctctcgccgg tgacaccgct cctggtgcca      1560
     gtgccgccgc gcgacggcag gacgtacgca caagccacgc gtagcaccac gccaatactg      1620
     tacaacgcac aacacgggac gacgacgtcg gccacccggc aggcgactcc gtcactatgg      1680
     gcggcacgcg cctccactgc aacgccgcac cgggcaccat caccaacagt acggctccca      1740
     acgcggacgg taccgccagc aattcttacg gaggagcaac ggaaggcaga cccagagttc      1800
     catcaagtga ggacgcagaa ccagcgtcat cgtagaatgc tggaagcgct tgtggcaagc      1860
     atgaaggatt ccgaggccac agcggcacac tacgagacgt cgtacatgta cgcaaaggtg      1920
     ctggcggaac acgcggagat gggacgcgaa gggctacgac gccatttcag ccttctcgcc      1980
     gacaactacc caaaagcaca cccagttgac agaccatact ggtattgtca gggtcaaacg      2040
     ccggaaggac gaccgtgcac gtacgcgcac gaacacgagg cagtgatgcg cagccacatc      2100
     gcgaaacgtc acgagggaca gagggtggaa atgcgtcagc acgtcctctc aagctacagc      2160
     ggtggagcgc acaacggcag atccacatgt gcggccacca cggcggcggc aatgtggagc      2220
     acccgaccgg acgcacggcg tgacaccgcg acgtgggccg ccttcaagaa atccacgccc      2280
     gcggcgacaa aggccatgct gcaggacttg cggctagctg tgcccaccac cgcgcgacga      2340
     gcgctagagg cagtcgttgc aagagaggcc gacaccacac aagacgacca ggaaacacat      2400
     caaaagctca ttctggtatc cgggagggtg aacagagcgg tcggagcagc agacgttaca      2460
     acgcagctag caaaaatggt aaccgaaaag cacgacgaga gcgcatacga ggatgtcacg      2520
     gaggtggcct tcaatatcct cgcgccggcg ggggctacgg gaatcgaggg gatgccgcac      2580
     gtcccggaga agatcgagct tccgtccgcg agcacaaaac aaacaatcga gcttaacctt      2640
     cacgcggtgg caagcgcaac ggagccaacc cacctaaccg ccgcggtgcg agaggtgcaa      2700
     aaaagacgcg gcatagagat aacaacatgg caccgctacg atggtgcggt gcacaccaca      2760
     tcgcccaccg caccgccatc aaactcggtt gtgatgcttc tttatacacg ggcacaaacc      2820
     acacaggatg agcaaaagca gctaacgcta aaaggagcag acggcgacaa ggacgacgac      2880
     acgtacagct tcctcagtga cgacagcgac accgaggaca gggttccaga agatatcgac      2940
     gatcgcacga gcacaagctt cacacaagag ttgtcgccac aaaccacggc ggaggatgga      3000
     gagcacgtct ttggcggaca cgtggaccca gccgtgctcg gagactggag cgaagaagat      3060
     gacagcctcg agcaggagac tgcggatcgc gcctgtcgcg gaagcgccgc tgcgaaaact      3120
     gagcgacacc gaagcatgac aaagttcctc gagagactcg cgcagcacga aagtatgacg      3180
     cactcaccga catcacccgg agacgtgata agagccgtca ttgaagaaga tgaggcatcg      3240
     agtgcactat tcgcatgcgg aattgagacc gcacgcacat gcaggagctg cgggtaccaa      3300
     gtcgatgcgg aggtgctgga tgacatagct gtggtgacgg tgacgaacac aggcctgcga      3360
     caagacaact tatccacaca gcagctggac gacgccatca accagcacac catttacacc      3420
     ccagaagagt gtgcgcgatg cggccgggaa accgcttctg caacacatcg cctcgtccaa      3480
     tgggcggtgg cggtggtcct tccagaaaaa gaagacacaa cgcagaccac ggaggagcga      3540
     catcttccgc gaacggtaat ggcaaccaat ggcaacggat cgcagtgcac attgcacctc      3600
     gttgcgatgg ccaatattca tgcccaccgt acagctgagg tgtgggagat ggtggcccga      3660
     cactccgacg gaaacgagca atggagacga cgcgggcaca cggacgaaga agaccagcaa      3720
     acggagacgg agagacgggg caacgtactt ttatacactc gagatgctcc caccgtcttg      3780
     gccgtgttca ccacagcggc gcgtagcaca agcgctgtgg aagaatcgac ggcactcacc      3840
     aatgtgacaa caccgcaacc agcagcaacg ccggagcacc gacaggaaac acgtgcaacg      3900
     caagacgcgc aacagacaca aagagagaca ccgacaccgc aacgctcact agaaggaatc      3960
     ctggaggagg tgaccggggt gcgaccacga tctgcggtgt ccaacatcga ggcggttcgg      4020
     cgaatgctgt gcagcattgc gagcggcaag atgagagcac gaggcgggat ctcaatcaac      4080
     caagccttcg ccaccctggc caacgtgaca caagagtgga gaacggcctt tgccgataac      4140
     gggtgggaaa ggcgcggctg tgcagcatgc ggggcccgcg agggccaaaa actattcgac      4200
     tcccagctgt cgatcgtgga tgtggcgatt cgaatgaaag aagagatatc gacaaccgac      4260
     ctgacagcag cgctcggcat acgcaaaaca caaacgagtg atgcgtgccc tgtgtgcgat      4320
     gcgcacatgc aatccaccat tcaacacgtt ccaggaaaag cagtcatgtt ttcaattgaa      4380
     gaggcgacgg cgacaggaaa ccaaatcacg acaagagtag cgccaccaac ttttacgcac      4440
     aaagcgccga acggagcaga agtcaccaga tccctactgg cagttattga cacaaccacg      4500
     gggccggaag cccaagtgca ccgcgttaca gcaaactggg ggacagcggc gcaacggtgg      4560
     tgcaaggtcc tgccggaagg aggggaacaa gagaccaagc ccaccgtccc accaaaaggg      4620
     aacttacttt gctacctttc tcacaagcca cgggtgacac aaacagcaca acgcaccgaa      4680
     gacgacgatc accgcgacac aaacaatgag gagatttcct cttcatcaca tcaagctccg      4740
     aaaaaacggg agcgaccggc gagcagcacg accacgccac cgagcatgaa accatcgaat      4800
     tgcagcgagg tgaaaattga caccacaccg ggaaggcagc ggcaaccaca caacagggag      4860
     gaggagcaga cacgcgaaac ggcacgtgcg ccaacttatc ccacggataa cgccgccaac      4920
     gagaacgcga gcgcgcggaa acgcgaggaa cagcggggcc cactgggagg cgccacttcg      4980
     acgagccctg ttgtaatcaa cagcagcgcc gacttttcga tggtggaaga caccgccgca      5040
     acaccaatcc agcggacgat gtcgttcacc ctcgaccccc tatcgccgga ggacgaagac      5100
     gcagtagcac cggacccctt tctggcatca attgtccagg tagtcggcga ggaagatgag      5160
     ggcacagcgg aagcaccatc gatgaacaac ggagaaaaca gtgagccggc tgaaacccca      5220
     acacgaagcc tttttgaagc agaagacgta ccgctgccgg cgtcaatcat tgatgtcgac      5280
     gacggtgccg aagaggacgc accacacgcc cagaacaacg ggcaacaagt ccgaaacgca      5340
     gccacgtctc cacaacggga ccgcgtaacg ccaccaccgg acgcgcggca ctgcccgcta      5400
     tgcccgcaca cccctaaaaa tcaaagcacg ccaaagccgc agcgcttcca acagctttgt      5460
     agccacatga acattaaaca tcacgtggcg gaagtggcag aggcggtgct tgaggcggcc      5520
     ggtttggaac gatgcagccg atgccggcag tttcttcgcc gcacccagag agcccgcgag      5580
     tcgcacaggt gtgagccaca agccggcgag ccaacccggg atgaagaggg cggggagacg      5640
     caacatgggg ctccccgggc gacggccacc gtgcgggatt tccgacatga cagccccacc      5700
     gcggatgaca cggagtggct cgaaaaaacg tcgagcacgg tacgccacct ccacaaaaaa      5760
     gagtggggac actggctggt gaccgtaggt acggttctca ccggatacac cgcatcggtg      5820
     gaggaagagc gatggaagcg acagctggcc atgacgacgg tcgtgcgcga caacctgggc      5880
     cgccaacgtc gcggcgacgg ggaaacgtcg caagcccaac cgcaacgctc ggaggcaaac      5940
     acggcgccgc agggaagggg tgaagaaaca acggccacgc aaccccaccg cgccattacc      6000
     gaggaaaact ggggccagga ccgggcggca gaggaggagg gacagctccc acaacagcac      6060
     aaggggatga ccgccgaagc ggagcgcgaa gagcagaacc ggaaacggat tctaaaccag      6120
     ctatcgctgg gcgctctggg aaaggcggcg cgatccctct tcaacaccca gcttccgcgc      6180
     gccaccatcg aagaggcgcg accgcaactg gaagcgctgc acccccaagc ctcggtaagc      6240
     gatctccccc tacctagtga gacgccgttc ctccacgctg tcaaaccaga gcgagtccga      6300
     gcggtcatca caaagcagct gggacgcgcg gcggcacccg gcttggacgg gtggacccga      6360
     gagctcctcg ttccaatcac cgaagacaag ggcctcctga ccgagctgac ggcactagta      6420
     caggacatgc tggtgggaaa cgtgcacccg tccttcgcga cacggatccg cgcctgcatt      6480
     ctacaccctt ttcggaagga agccggctcg gcgaaggtcc gtcccatcac gccagagtcc      6540
     gcgcttatga agctggctgc gcacatcgcg cttgacagtg tggagaagtc gttccgcagc      6600
     accttcaaag ggtggcagta cggcgtgtgg ggcgactcca ccgaggcggt gaagcgcatt      6660
     cgcgaagcat acgcggaggc ctcttcggac acgctggtgg cactggacgc gacaaacgcg      6720
     tacaaccgca tgtctagacg ccacatcctg gaggctgcgt acgcacaacc ggagctccgc      6780
     tttgccttcg gcgtggtgaa cctctccctc ggtgccgctg gtgagctcgc gctgtatgaa      6840
     aacggtgcga agatccacgc cctcaaatcg acagaggggg tgcggcaggg aatggtgctc      6900
     agcccgctgc tgtttgccaa cgccatgagt ggcatcatcc gaccactgat ggagatgcat      6960
     ccgagggtga aagtggtcgc ctacctggac gacgtgacgc tgatcggtcc gcacgctgcc      7020
     gtacaggact tcctcgcaga agcggggcca caactctcac gcgtcggatt cgacatcaac      7080
     ccggcgaagt cccaccacct ggcaaagctg gaggttccag aggcgttaag tgtaagcgga      7140
     agaacgattc cgattgcaca gggcgtggtg cgcatcctcg gtgcgggttt ccgaggggac      7200
     acggcctcag tagaggagtg ggtgtgggag aagacgaaga cgcatgacca ctacttcgag      7260
     aagctgcaat cggaatggct gccgcgattg gcgcgactcc agctgctgcg tggctctacc      7320
     gtgccgcgcc tcaaccacct tttgcgcacc cacaagccgg aggaactcaa tcgaagtacg      7380
     acttggtttg acgagcgcgt gatggaaacg gcgctgaaca ttgccaacat cggtgaccga      7440
     agaaacgcgg acgacggaga cccagggcac acgccgcccg accccctacg agagacaagg      7500
     ctcctggttc gacttccgat ggcgatgggg ggtctggggc tgcggtcgca aaagccaatt      7560
     gcggggtttg ccgcggagtg tgtggggacg aagaacgcgc agcgcgagcg cacggcggtg      7620
     gtcgacgtcg agattgagaa gagccttcat tctctccttt cggagcctgc tcttcttctc      7680
     ctggacgcga acacggcgac gggtgcgacg cgtgcgttgg tggacccggc ggtgaaaatg      7740
     tcggaccgtg cagcggaggt gatgctgaag cagcgccttt ttcaacgcgt gctcccggtg      7800
     gggtggcagt gcgtgtgtgg agaagacgca acgaacgagc acatcaacag atgcaggcag      7860
     gcagaaggcg gtgcaaggat tgcgcgacac aacaaggtgc gtgacacagt catcggctgg      7920
     gcaaccgaaa tcggttatgt ggcgagagca gagccgccga cacagaacca gctggcaaca      7980
     acgattgaaa acagccatcg acgacggctg gacgtggaga tcacaacgcc gaacggaacc      8040
     ttcactaccg acgtcacggt gacgtacccc ggtcgaacgg gtctagggac acacgccgta      8100
     caggaggcgc acaccaacaa gttggcaaag cacggcgacg acgcgcgtgc acaggacaag      8160
     atatttgccc cactagcgct ggagtccacc ggtggaattc acaaggacgg cttccagtgg      8220
     atgcggcggc tggccggcgt aaaaccgcac ccgtacacac ccaatactgc gctcagcatg      8280
     ttgctgacaa aggtggctca agcactgcac gagggtaatg cctacatgtt tcatgtggca      8340
     gatcaagcgc acaaacaccg ccagctcgga cgttcggtcg gtgaggtgca agagtagagt      8400
     acattgaagg gcggtgaact gtcagagcta ttttttcctt tacatttttc tttgtttcac      8460
     aacaaggctt tacaataggc gacgcggaag atgaaggaca atcaccgaca tcttttatgc      8520
     atcatacgcg acggcaccgc agtaacaaaa tggaaatttc aaatggaatt ttaaatgaca      8580
     taacaccaag agaatgcgcc ttgtctgcaa aaccaccggt ggggcgtcat gatgacatcc      8640
     agatgcggat gtgcggaacc aatacaccag gaccgaccac acaatcggtc aacacacaga      8700
     aaaaaaaaaa aaaaaatcca gtatgctaaa gagagtggat cacagcgcct acgtataaga      8760
     aaatgataaa attaatgaaa ataatagatc acctttaccc catcaaggat atcaaagcgt      8820
     gcagccctct gttaaagatg tgaaaagcac aaagaaaaaa gaaaagaaat gaaacgagac      8880
     tgaacatact gatatattac actaatctgg cgcagaaaaa aaaaaaaacc agcccgggcc      8940
     tttacacatt ccaccttccg ttgacgacgg ctcttaacac gatgcaaaat tcgacatctt      9000
     gagcctcgaa tgccaaccga caacatgaga gcaccacctt ttaatcaaaa gaactcggaa      9060
     aaagaacaga aaagcaaata agatgacgaa agagaatcca gcacgccttt ctattacgga      9120
     aagcgttcaa tattgtaaac ccagcgagaa tcaacccgag taggtcaacc tcaaagaggc      9180
     agatccaggg tatcaacttt taatttctta cccaattgca gccgcttttt tccttgcttc      9240
     aactttttct tgcttttagt agcgccagaa ataatcatca aggtcagata gcagtcctct      9300
     cttttttaac tttagttttc caacgactgc atttttcatt tttctttttc caactctatc      9360
     ctttccgagt aaaacgtcga aaactacagt ggacgcctag tgcttcacgt catgtgaaga      9420
     ataaaaaata tgctaaggtc acgggcaaag gacatcacgt atccacactt tgtcttcgga      9480
     caaggcgatg gacgggaact ggcgttttgg aggtggttca cgcaactggt tcgtgccact      9540
     tatttcctgc gttctgacgg tgatgacaga ccggtgcgat ggtcggggca cccgc           9595
//
ID   CSP2034   repbase; DNA; INV; 498 BP.
CC   CSP2034 DNA
XX
AC   J01186;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   S.purpuratus repetitive sequence csp2034.
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   sea urchin.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-498
RC   [1]  (bases 1 to 498)
RA   Posakony J.W., Scheller R.H., Anderson D.M., Britten R.J.,
RA   Davidson E.H.;
RT   "repetitive sequences of the sea urchin genome: iii. nucleotide
RT   sequences of cloned repeat elements";
RL   J. Mol. Biol. 149, 41-67 (1981)
XX
DR   GENBANK; J01186; 77.0.
CC   Positions       1     498  Accession No J01186        GenBank (rel. 77.0)
XX
SQ   Sequence 498 BP; 116 A; 101 C; 75 G; 206 T; 0 other;
     aattccattt cccgtttacg tgtaatcgcc atgggaaatg tgttggtata tcggtaacgc        60
     acttgacttc caagctcgag atacctggtt tgagtccggg tgtctccaac aatttttgtc       120
     ttcatttctt ttttcttttt gacctttcac tgtaccatct cctttgatta ttaaaacatt       180
     attcgcaaat aatgtaataa acaaccgtat ttaccttatt attacccttt tttccactta       240
     atccattatt tagtgcgtgt agtccctatg ggggatgact tttttttcaa atctagattc       300
     tacattcctg tcttttgcga gcaatatcgc cgttatttct gcttggattt agttgatttt       360
     tgagtatgtt gtagctgaga ctatatgcta tctaaatcat tcctcatttt ttcaattaga       420
     tatcaggatc acgcttatga tcatgatcat tatcatctca tttctcactg agtattattt       480
     atatgtctgt ctctcccg                                                     498
//
ID   CSP2090   repbase; DNA; INV; 167 BP.
CC   CSP2090 DNA
XX
AC   J01187;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus repetitive sequence csp2090.
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   sea urchin.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-167
RC   [1]  (bases 1 to 167)
RA   Posakony J.W., Scheller R.H., Anderson D.M., Britten R.J.,
RA   Davidson E.H.;
RT   "repetitive sequences of the sea urchin genome: iii. nucleotide
RT   sequences of cloned repeat elements";
RL   J. Mol. Biol. 149, 41-67 (1981)
XX
DR   GENBANK; J01187; 77.0.
CC   Positions       1     167  Accession No J01187        GenBank (rel. 77.0)
XX
SQ   Sequence 167 BP; 44 A; 36 C; 36 G; 51 T; 0 other;
     aattcgggat caaaaccgtg tcgatgtgct atattagtgc ccttttaggg gttcctgact        60
     gacctaaagg tttataatta tcattgaagc atgagctaaa tccaggattt tgtttcagaa       120
     tctgaggcct gtcttcatca gctcgagatt gccaaataac ccgcccg                     167
//
ID   CSP2096   repbase; DNA; INV; 203 BP.
CC   CSP2096 DNA
XX
AC   J01188;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus repetitive sequence csp2096.
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   sea urchin.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-203
RC   [1]  (bases 1 to 203)
RA   Posakony J.W., Scheller R.H., Anderson D.M., Britten R.J.,
RA   Davidson E.H.;
RT   "repetitive sequences of the sea urchin genome: iii. nucleotide
RT   sequences of cloned repeat elements";
RL   J. Mol. Biol. 149, 41-67 (1981)
XX
DR   GENBANK; J01188; 77.0.
CC   Positions       1     203  Accession No J01188        GenBank (rel. 77.0)
XX
SQ   Sequence 203 BP; 50 A; 43 C; 50 G; 60 T; 0 other;
     aattcgggta cgagttggat tgtaggagtg tagtgagtct ttaatgtatt gtggcgagat        60
     tccatggaga gcccgataaa caagtaacat aattttgaag tggacccttt tctggacagg       120
     tagccagtga agagagcgta atataggcgt aatagaagac attcttggcc ccccccttct       180
     ctctctctct ctctctctct ccg                                               203
//
ID   CSP2108   repbase; DNA; INV; 312 BP.
CC   CSP2108 DNA
XX
AC   J01193;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus repetitive sequence.
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   Sea urchin DNA, clone lambda-2108-16.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-312
RC   [1]  (bases 1 to 312)
RA   Scheller R.H., Anderson D.M., Posakony J.W., McAllister L.B.,
RA   Britten R.J., Davidson E.H.;
RT   "Repetitive sequences of the sea urchin genome: II. Subfamily
RT   structure and evolutionary conservation";
RL   J. Mol. Biol. 149, 15-39 (1981)
XX
DR   GENBANK; J01193; 77.0.
CC   Positions       1     312  Accession No J01193        GenBank (rel. 77.0)
XX
SQ   Sequence 312 BP; 79 A; 76 C; 51 G; 106 T; 0 other;
     ctgacttggt cgacagatct ggaatgagct tcccttggta attgatcata cccaagaacc        60
     gttggacatc tttccgacat ttcggtctct caatgttcaa gatagcagac actttctttg       120
     gatcacgttg aactccttga tcactgatca agtcaccaat aaatgtgagc ttcttgacat       180
     tgaactcgca tttgtctttg ttcaacttga gatacatttt tttcacaatg ctgagaacct       240
     ctctcaacct gttatcatgc tcctgttagg tagttcccta tacaatcaca tcatccatca       300
     ttgtgttaac tc                                                           312
//
ID   CSP2111   repbase; DNA; INV; 155 BP.
CC   CSP2111 DNA
XX
AC   J01195;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus repetitive sequence csp2111.
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   sea urchin.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-155
RC   [1]  (bases 1 to 155)
RA   Posakony J.W., Scheller R.H., Anderson D.M., Britten R.J.,
RA   Davidson E.H.;
RT   "repetitive sequences of the sea urchin genome: iii. nucleotide
RT   sequences of cloned repeat elements";
RL   J. Mol. Biol. 149, 41-67 (1981)
XX
DR   GENBANK; J01195; 77.0.
CC   Positions       1     155  Accession No J01195        GenBank (rel. 77.0)
XX
SQ   Sequence 155 BP; 40 A; 45 C; 27 G; 43 T; 0 other;
     aattcggatt aacctcggct ccttgactga tcagatattt ggtgacatca agatgaccac        60
     agccccactg cactacttat agcctattgc gccctctata tagcaaacaa tgcctaatag       120
     gtgaccattg gtcacacatg gtcccctttt tcccg                                  155
//
ID   CSP2112   repbase; DNA; INV; 257 BP.
CC   CSP2112 DNA
XX
AC   J01196;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus repetitive sequence csp2112.
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   sea urchin.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-257
RC   [1]  (bases 1 to 257)
RA   Posakony J.W., Scheller R.H., Anderson D.M., Britten R.J.,
RA   Davidson E.H.;
RT   "repetitive sequences of the sea urchin genome: iii. nucleotide
RT   sequences of cloned repeat elements";
RL   J. Mol. Biol. 149, 41-67 (1981)
XX
DR   GENBANK; J01196; 77.0.
CC   Positions       1     257  Accession No J01196        GenBank (rel. 77.0)
XX
SQ   Sequence 257 BP; 70 A; 54 C; 61 G; 72 T; 0 other;
     aattctaaat cctgaaatgt catgcgctct cttatctcac cactggtcaa tagttgaaga        60
     ttagcgcata acttttcggc ggcttggagc atggggtcaa aggagagcgg cttgattcca       120
     gtccttctct atcacgtccc ataaggaccg gtattcataa tacgagaaga gggttggtat       180
     tcataatacg agaagagggt cgctgttcat aatgcaatat cggggtcgtg tcaaattttc       240
     aaatttcgag accaccg                                                      257
//
ID   CSP2137   repbase; DNA; INV; 226 BP.
CC   CSP2137 DNA
XX
AC   J01197;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus repetitive sequence csp2137.
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   sea urchin.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-226
RC   [1]  (bases 1 to 226)
RA   Posakony J.W., Scheller R.H., Anderson D.M., Britten R.J.,
RA   Davidson E.H.;
RT   "repetitive sequences of the sea urchin genome: iii. nucleotide
RT   sequences of cloned repeat elements";
RL   J. Mol. Biol. 149, 41-67 (1981)
XX
DR   GENBANK; J01197; 77.0.
CC   Positions       1     226  Accession No J01197        GenBank (rel. 77.0)
XX
SQ   Sequence 226 BP; 62 A; 45 C; 30 G; 89 T; 0 other;
     aattcgtttg ataaaattat ggagagctcg catgatacgt catagagttg ccaatttgtg        60
     tttgattgat cacaacttca aaaatcctaa cttcattatt tttaatcgga atttgctcaa       120
     actttcactg acttgtttct ctcatttttc tactcctatt taaactaact taatttcagg       180
     gtggactttc cctttaaagc ctcgttacga attatttcat tcaccg                      226
//
ID   BR1_CT    repbase; DNA; INV; 242 BP.
CC   BR1_CT DNA
XX
AC   J01053;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Chironomus balbiani repetitive sequence.
XX
KW   Repetitive sequence.
XX
OS   Chironomus thummi
CC   Chironomus thummi thummi (midge) genomic dna.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Chironomidae.
XX
RN   [1]
RP   1-242
RC   [1]  (bases 1 to 242)
RA   Baeumlein H., Wobus U., Gerbi S.A., Kafatos F.C.;
RT   "the basic repeat unit of a chironomus balbiani ring gene";
RL   Nucleic Acids Res. 10, 3893-3904 (1982)
XX
DR   GENBANK; J01053; 77.0.
CC   Positions       1     242  Accession No J01053        GenBank (rel. 77.0)
XX
SQ   Sequence 242 BP; 100 A; 62 C; 51 G; 29 T; 0 other;
     ccaagatcaa gaccaagcaa gggatctaag cctagcaagg gatccaaacc agaaggacca        60
     tctaaaccaa aatccagacc cgaaaaacca tctaaaccaa gcaagggaac taagccacgt       120
     ccatctaagc ctagcaaggg aactaaacca cgtccatcta agcctagcaa gggatcaaaa       180
     ccaaaaccag aaagatgcgg tagtgcaatg agaagagttg aaagcgagaa atgcgctgca       240
     ac                                                                      242
//
ID   BR2_CT    repbase; RNA; INV; 240 BP.
CC   BR2_CT mRNA
XX
AC   K02310;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   C. tentans beta-repeat in Balbiani ring 2.
XX
KW   Repetitive sequence; CTBR2.
XX
OS   Chironomus tentans
CC   C. tentans salivary gland, cDNA to 75S mRNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Chironomidae.
XX
RN   [1]
RP   1-240
RC   [1]  (bases 1 to 240)
RA   Hoeoeg C., Wieslander L.;
RT   "Different evolutionary behavior of structurally related, repetitive
RT   sequences occurring in the same Balbiani ring gene in Chironomus
RT   tentans";
RL   Proc. Natl. Acad. Sci. U.S.A. 81, 5165-5169 (1984)
XX
DR   GENBANK; K02310; 77.0.
CC   Positions       1     240  Accession No K02310        GenBank (rel. 77.0)
XX
SQ   Sequence 240 BP; 100 A; 40 C; 59 G; 41 T; 0 other;
     aaatgcggca gtaaaatgag aagagtttta gccgaaaagt gtgctgctag aaagggtaga        60
     ttcagtgcaa gtaaatgcag atgtttctca agaccaagtt ggtcaggaat taaaccagaa       120
     aaacgtagca aatcaggatc aagaccagag aaacgtagca aatcaggatc tagaccagag       180
     aaacgtagca aatcaggatc aagaccagag aaacgtagca aatcaggatc tagaccagaa       240
//
ID   D88I      repbase; DNA; INV; 119 BP.
CC   D88I DNA
XX
AC   X01062;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.drobachiensis repetitive sequence D88I.
XX
KW   Repetitive sequence.
XX
OS   Strongylocentrotus drobachiensis
CC   sea urchin
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-119
RC   [1]  (bases 1 to 229)
RA   Johnson S.A., Davidson E.H., Britten R.J.;
RT   "Insertion of a short repetitive sequence (D88I) in a sea urchin
RT   gene: a typical interspersed repeat?";
RL   J. Mol. Evol. 20, 195-201 (1984)
XX
DR   GENBANK; X01062; 77.0.
CC   Positions      37     155  Accession No X01062        GenBank (rel. 77.0)
XX
SQ   Sequence 119 BP; 39 A; 30 C; 21 G; 29 T; 0 other;
     tttattatat acctcactta agaaatccag ccatctgatc ggtcaaaatt gcaggccgag        60
     ggcaatggca caattgtaac ctccccgaga gcgtataaaa ccaactatgt ctctcaaag        119
//
ID   DPSAT1    repbase; DNA; INV; 324 BP.
CC   DPSAT1 DNA
XX
AC   M31307;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   D.pulchellus satellite DNA.
XX
KW   Satellite repetitive element; DPSAT1.
XX
OS   Diadromus pulchellus
CC   Diadromus pulchellus imago DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Ichneumonoidea; Ichnomonidae; Ichnomoninae.
XX
RN   [1]
RP   1-324
RC   [1]  (bases 1 to 324)
RA   Bigot Y.B., Hamelin M.H., Periquet G.;
RT   "Heterochromatin condensation and evolution of unique satellite-DNA
RT   families in two parasitic wasp species: Diadromus pulchellus and
RT   Eupelmus vuilleti (Hymenoptera)";
RL   Mol. Biol. Evol. 7, 351-364 (1990)
XX
DR   GENBANK; M31307; 77.0.
CC   Positions       1     324  Accession No M31307        GenBank (rel. 77.0)
XX
SQ   Sequence 324 BP; 87 A; 75 C; 79 G; 83 T; 0 other;
     gataatttcg agccagctac tttcgtttag ccagaaaagt gcttttcgct tgaaacggca        60
     aatcctgctt tctgagcgct gtagagatgc gggcctgccc aaaaccccct agctctcttc       120
     atttggtgta actatgcatg aatcaaaaga gaaacccgat cccgagcttt ataattgctg       180
     ggaaaacgcg ttttaggcga aaacgcgagt acggtcgatt tgcgtcgaaa agcaaaaaac       240
     ctgctttctg agcgctgtta aggccgggga tcgctgtaaa ccctctgagg cgtttcaatt       300
     agtcaaactg tacggtggaa cagt                                              324
//
ID   DRE       repbase; DNA; INV; 6428 BP.
CC   DRE DNA
XX
AC   X57034;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   D.discoideum retrotransposon DRE.
XX
KW   Repetitive sequence; long terminal repeats; LTR;
KW   retrotransposon dre.
XX
OS   Dictyostelium discoideum
CC   slime mould
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina;
OC   Rhizopoda; Eumycetozoa; Dictyostelia; Dictyosteliida;
OC   Dictyosteliidae.
XX
RN   [1]
RP   1-6428
RC   [1]  (bases 1 to 6428)
RA   Marschalek R.;
RT   "Direct Submission";
RL   Submitted (17-DEC-1990) R. Marschalek, INSTITUT F BIOCHEMIE DER
RL   MED. FAK., FAHRSTR 17, D 8520 ERLANGEN
XX
RN   [2]
RP   1-6428
RC   [2]  (bases 1 to 6428)
RA   Marschalek R., Hofmann J., Schumann G., Gosseringer R.,
RA   Dingermann T.;
RT   "Structure of DRE, a retrotransposable element which integrates with
RT   position specificity upstream of Dictyostelium discoideum tRNA
RT   genes.";
RL   Mol. Cell. Biol. 12, 229-239 (1992)
XX
RN   [3]
RP   1-6428
RC   [3]  (bases 1 to 6428)
RA   Marschalek R.;
RT   "Direct Submission";
RL   Submitted (14-DEC-1990) Marschalek R., Institut fuer Biochemie der
RL   med. Fak., Fahrstrasse 17, D-8520 Erlangen.
XX
RN   [4]
RP   1-6428
RC   [4]  (bases 1 to 6428)
RA   Hofmann J., Schumann G., Borschet G., Gosseringer R., Bach M.,
RA   Bertling W.M., Marschalek R., Dingermann T.;
RT   "Transfer RNA genes from Dictyostelium discoideum are frequently
RT   associated with repetitive elements and contain consensus boxes in
RT   their 5' and 3'-flanking regions.";
RL   J. Mol. Biol. 222, 537-552 (1991)
XX
DR   GENBANK; X57034; 77.0.
CC   Positions       1    6428  Accession No X57034        GenBank (rel. 77.0)
XX
SQ   Sequence 6428 BP; 3158 A; 1171 C; 736 G; 1363 T; 0 other;
     agatcgaaaa aaaacaaaca acaacaacaa tctctttttt tgattatttc atttttcata        60
     taaaaaagac ttaaaaaaca aataaataaa taaataaact atcttaaaaa gccatctttt       120
     tactttattg taatttatta tttgtttcgt tttgagaatt ttgcgtagca aaattttcaa       180
     aaaaaagcaa aaaataatca gatcgaaaaa aaacaaacaa caacaacaat ctcttttttt       240
     gattatttca tttttcatat aaaaaagact taaaaaaaaa aaaaaaaaaa aaaaaaaaaa       300
     aaaaaaaaaa cctgggaacc caagttaatc agaaaatttc cagattttta actttttaaa       360
     gaaaaatata aaaaatagaa agaaaataaa atgaaaatca caaacaacac cacaaatatt       420
     aagcaacaca aatgcctaca aaaaataagc gaaattgtgg ataaaactca attaaaaaaa       480
     aaacaattca aatacgtcat aaacatcaat cacgaaccag acgataaaat aaaaaaagat       540
     ttagaaaaaa gtttggacaa aaaagatgtt ttaatcaaaa gtaataatac attcaaaatt       600
     ctcacagaca gtattagtac agtaatctat tttgtaaata tgttcgatgc agaattaaaa       660
     ggacaattta taaccactct aagaccaaaa aatatgtata cggatttcga ttggtataaa       720
     tcactcacag aaatagaatg ggtaatagaa aatgaaggat gtaaactaat taaatctgaa       780
     attaaaggcg aaactctaat tatcaaaaca gtgaaaagag tcgtagaaga atatgacact       840
     atcattgaac tagacaatct aacattaatt ggacactcca acaaaggatg gagagatcaa       900
     acctcattac cagaaaatca agaagaaaac aaaaataaaa aacaatcaga tgaacaacaa       960
     ccaaaatcta catcagaaca aataccaaaa caaggaaaaa gaacaatcat tatcccacca      1020
     atcacctcct catctaatga taaaacattt atggccctag atgatacagc tcaaaaggta      1080
     atagatgcat cactagaaaa cgtagatgaa ctaacaagaa tagagaatga gatcaatacc      1140
     caatcgataa aaaatcaaga aattaaaaca aaatcagaaa aacctattga accaccatct      1200
     ccatacaata caccaataaa acaacacggc gaaacaaaga gactaacaac ggaagaaaaa      1260
     cttagagagg taaatgatat cttcgacttc accagcccaa acactgatgc aataagaaaa      1320
     atagaattcc cactttcaat cccttcaaat caatggttct tctcctctcc aataaaacat      1380
     atcatgagtt tcagcccaac ctatggtaca ccatcgaaaa ttatcgattc accaagtaaa      1440
     ttgttaaaca caccaaaaaa caaacaacaa gacaaaacaa acaggaccaa caaaacacca      1500
     gtcaaaccaa aattgggtga atatggacaa aaaagcataa aaacaaaaat ggatgaagat      1560
     atagacaact tcaacaagga aattctaaaa caaatcagta aatcaaaaaa ccccacaaac      1620
     acacaagacc aacaacacaa cgaacaaagt aaagatcagt tagaagacaa aataaaccag      1680
     aaacttcaaa aggtagataa aaatctaccc caaataaaac tataaagaaa aacacaataa      1740
     gaataggtgt ttggaacgtc caaggatcca acaccatcca atctgccagc ataataaaca      1800
     ccgtattaga caacaacaag ctggacgcag cacttctaac tgaaacaaat ataaaaacaa      1860
     ataaaattta ctcaataaat caacaatata aaaacaaaat aacacaccac gcaccaattg      1920
     ataaaacagg acaaggggtg tcacaaatca tcatcaacac ccaaataaaa acaacaacaa      1980
     aaacaataaa cgaaagaatt atatcttccg aatggatgat tgcaaaaaca cagatcaaat      2040
     gcacaaccat ttatgcccca gcaaagtcaa acgaaagaca tgaatggtat aaggaaaatc      2100
     tcacagaaga aatactacac agcgatatta taaccggaga cttcaatgta gactgttcag      2160
     tggataataa ccttaacaaa tatattaaaa caatcttcga cgaattcgaa tttacagaaa      2220
     ttaagaatgg aatcacattt ccaagaaaca aatcaaccat cgatagggtc tttgtctcaa      2280
     agaagatact ccatctaaac ccaatagtta ctactaagga aatcaaatta aaatctgatc      2340
     acaacatggt aatcattgaa ttaaaaatac cagaatacga gcaacaaaag aaaggagaaa      2400
     gactatggag acaaaaccta gaaactctca aaatgaattc aaccagcctc aaaattaata      2460
     aaacaattaa atactacaat aaaaaattcg aagagaacac cagcaaatgg tacaaattaa      2520
     acatttgcga acaatggttg aaactaaaag atgaaataaa gaaactgtca attaatatag      2580
     aaattagaga aagcaataaa accaaaaaca aactaaaaga actcgcagaa aaactcgaaa      2640
     cagccaaaga ttcaagagca atcttcctta aagaagagat caacaatatt ctaaaggaac      2700
     aagtaagaat aaaacaagca aaccaaacca acacccacat caacaacaaa gaaacaccat      2760
     caaaatactt aaccagaagg ttaaaagtcc aaagaaagac aaatgaaatc cctcaaattc      2820
     tagatccaag caacaattgt ttggtaacaa aacacgagga tatcctcgaa gtagcaagaa      2880
     gatattacga gaacctgtac cagaagagag aatgcaacga agacactcac cacgaactcc      2940
     taaaaacatt caataaaagg attgaacaaa agatattgga cgaaattaat caaccaatag      3000
     aaggatatga aatcagacta ggcattgaaa aaatacaaga aggaaaagca cctggtaaag      3060
     atggactcct tccaacattt tacaaaaacc acattaatga aattctacca ataatatcaa      3120
     aactatacaa tcacttctgg aacacaacaa tcccaaagga cttcaaacaa gggatattga      3180
     ttactatata taaaaacaaa ggagacccaa acaacctgga taattataga ccaataacac      3240
     ttctaaatgt cgattacaaa atctattcga aaataatcaa caataggatc ctgaagttat      3300
     taaacaaaat aatctcacca ttccaaactg gattcgtacc aagaagacta ctgcacgata      3360
     acatcatcac cttaaactca acaatagaaa taataaaacg agagattaac acaaaagagg      3420
     atatggaacc aatcataaca ttttatgatt ttgaaaaagc attcgattca atctcacata      3480
     acgccattct acgtactctt gcacatctaa aactaccact caaaatggtc ctcacaataa      3540
     tgaacttact caatgaatca gaaacatcag tgtacatcaa taactcatta tctaaaagct      3600
     ttacatcaaa aagaggaacc aaacaaggtg atcctatctc tcccactatc ttcgcattag      3660
     tggttgaatg catggcaact actataataa atgaccgctg catcaatggt gtaaccaaag      3720
     aaaccattaa aatactacag ttcgccgatg atacagcaac aatagcatac aactttatgg      3780
     accatttcct catgaatgaa tggatcaaga agttttgcca agcaaccagc gcaaaaataa      3840
     accaaaccaa atgctcgtgt atcactttca aatggaacac cagaacgcta tacaccgtca      3900
     taaaatcaaa cgaaaggtac ctcggctttg acttcaacaa taagggtatc aaatccaaaa      3960
     tcaatacaat ctcagacaac atcagagcta aactagtaac atggaactca acttcatcaa      4020
     cctatatggg cagactcata atggcaaaaa catatgcact atctcagtta acgttccaca      4080
     cttacatcaa caccacacca caacacaata gtattgaaaa taacatcgta aaattcgttt      4140
     tcaacacaaa atctaaaaac tctctttcac tacaaagaag acaaaacaac tatatcaatg      4200
     gtggcctaaa cttatggaac ctgaagacaa gagaactagc acagaaagca tggttattcg      4260
     aaagatacct ccaccaaaga gtaagtaaca ctcctagttc atatataaaa ctgtgggaag      4320
     aggaactcaa aaacaacaac aacaacaaaa caacaacaaa acaaaatcaa ctacaactac      4380
     actggcaatg caagcaagca tggacccaat taaaaactcc acaaaataaa caaacacact      4440
     acgaacacct cccaaaatta aaaaaaatat acgaggatat gatgacaact caatctcctg      4500
     aacacaacaa attcatacca actcctggcc aaaaagaaat aatgaccaaa attaatagca      4560
     aacaccttcc atttaaagaa atcaaaaaaa taataaacat gaaaggtaga gatctattat      4620
     ggagatacac actgaaagca ctaccaaaaa tatacaacat gccatgccaa cagtgtgggg      4680
     aagatgagac ctcagaacat atattcttca actgcaaagc ccacatcaaa aacacacaag      4740
     aaatcttcaa ctacacccta actaagtctg gacacaccac tcacacctgg aatgtgaaga      4800
     ttttaaacca tctacaaatt gcactagtag ccaatttaat agctattata ttcgataaaa      4860
     tctggcacaa aagaaataaa ctcattcacg atgaaaaaga aataataatt cacagacaac      4920
     aagtcatacg tgaactaatt aaaacacaaa gagctgcatg ggacaggaca caagcggtta      4980
     taaacaaaac attaagaatc aaatcaaaac aacggccaga agaacaaaat aaattagact      5040
     cactaatctc gctaaagcta ttacaattta gcagacaatg gaactcacct cttcacgcaa      5100
     tagaacttcc taaacatctc aaaaaataca ataattcact cagtactttc tataaataaa      5160
     taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaacc      5220
     tgggaaccca agttaatcag aaaatttcca gatttttaac tttttaaaga aaaatataaa      5280
     aaatagaaag aaaataaaat gaaaatcaca aacaacacca caaatattaa gcaacacaaa      5340
     tgcctacaaa aaataagcga aattgtggat aaaactcaat taaaaaaaaa acaattcaaa      5400
     tacgtcataa acatcaatca cgaaccagac gataaaataa aaaaagattt agaaaaaagt      5460
     ttggacaaaa aagatgtttt aatcaaaagt aataatacaa ttcaaaattc gaaacaaaaa      5520
     aaaaaaaaaa aaaaaaaaag taaactaacc cctcttttag agaccctgta aaaaaaaaaa      5580
     aaaaaataaa ataaaatgag atctagcatc tcaaggagaa gcaaataata attgcgttat      5640
     ccaattcaaa aaaaaaaaag ttgaataaga agagaaaaaa aacaaacaac aacaacaatc      5700
     tctttttttg attatttcat ttttcatata aaaaagactt aaaaaacaaa taaataaata      5760
     aataaactat cttaaaaagc catcttttta ctttattgta atttattatt tgtttcgttt      5820
     tgagaatttt gcgtagcaaa attttcaaaa aaaagcaaaa aataatcaga tcgaaaaaaa      5880
     acaaacaaca acaacaatct ctttttttga ttatttcatt tttcatataa aaaagactta      5940
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaacc tgggaaccta agttaatcag      6000
     aaaatttcca gatttttaac tttttaaaga aaaataaaaa aaatagaaag aaaataaaat      6060
     gaaaatcaca aacaacacca caaatattaa gcaacacaaa tgcctacaaa aaataagcga      6120
     aattgtggat aaaactcaat taaaaaaaaa acaattcaaa tacgtcataa acatcaatca      6180
     cgaaccagac gataaaataa aaaaagattt agaaaaaagt ttggacaaaa aagatgtttt      6240
     aatcaaaagt aataatacaa ttcaaaattc gaacaaaaaa aaaaaaaaaa aaaaaaaaaa      6300
     aaagtaaacc aacccctctt ttagagaccc tgtaaaaaaa aaaaaaaaaa taaaataaaa      6360
     taaaatgaga tctagcatct caaggagaag caaataataa ttgcgttatc caattcaaaa      6420
     aaaaaaaa                                                               6428
//
ID   DRP_EG    repbase; DNA; INV; 496 BP.
CC   DRP_EG DNA
XX
AC   X67153;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   E.granulosus EgDRep repetitive DNA element.
XX
KW   Repetitive DNA element.
XX
OS   Echinococcus granulosus
CC   Echinococcus granulosus
OC   Eukaryota; Animalia; Eumetazoa; Platyhelminthes; Cestoda;
OC   Eucestoda; Cyclophyllidea; Taeniidae.
XX
RN   [1]
RP   1-496
RC   [1]  (bases 1 to 496)
RA   Marin M.;
RT   "Direct Submission";
RL   Submitted (01-JUL-1992) M. Marin, Facultad de Ciencias, Sec
RL   Bioquimica y Biol Molecular, Tristan Narvaja 1674, 11200
RL   Montevideo, URUGUAY
XX
DR   GENBANK; X67153; 77.0.
CC   Positions       1     496  Accession No X67153        GenBank (rel. 77.0)
XX
SQ   Sequence 496 BP; 158 A; 103 C; 106 G; 129 T; 0 other;
     caaatttgat ggtatttgag ctgtcttact tagtatcttc acgaatccta cgtagcgtcc        60
     cgagactccc tgaagacgaa agaagacaaa atactcgggc agaatatata ttcagcgcag       120
     agaaggtgtc tgggctattg catgcccaaa aggccagccc acccagcgag gtacaagggg       180
     gctaattcaa agtacaaaag tggcgcctca ccagaaccga gggataaacc gctgtcgtat       240
     tacacttatg cgttttatga tggggtaatc tgaatcagat ttttgaaacg cgctgaagtt       300
     ctgcgaacta taattagggc taatctctta gtaatatatc atcccatgtc ttcttcagtc       360
     ctaaagagcc aaagtaaggt actaaaaata taatacaata cacaaaagaa gctgcaagac       420
     tgctggtccg gttggaagga cgttgtcttt tgttcacatg ttatgtttaa caagcaatca       480
     aagccttaca tcaaat                                                       496
//
ID   EHINV1    repbase; DNA; INV; 512 BP.
CC   EHINV1 DNA
XX
AC   X61182;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   E.histolytica inverted repeat downstream of rRNA genes.
XX
KW   Inverted repeat; repetitive sequence.
XX
OS   Entamoeba histolytica[B
CC   Entamoeba histolytica
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina;
OC   Rhizopoda; Lobosa; Gymnamoeba; Schizopyrenida; Tubulina;
OC   Entamoebidae.
XX
RN   [1]
RP   1-512
RC   [1]  (bases 1 to 3699)
RA   Bhattacharya S.;
RT   "Direct Submission";
RL   Submitted (01-AUG-1991) S. Bhattacharya, Jawaharlal Nehru
RL   University, School of Enviromental Sciences, New Delhi 110067,
RL   INDIA
XX
RN   [2]
RP   1-512
RC   [2]  (bases 1 to 3699)
RA   Mittal V., Sehgal D., Bhattacharya A., Bhattacharya S.;
RT   "A second short repeat sequence detected downstream of rRNA genes in
RT   the Entamoeba histolytica rDNA episome.";
RL   Mol. Biochem. Parasitol. 54, 97-100 (1992)
XX
DR   GENBANK; X61182; 77.0.
CC   Positions       1     512  Accession No X61182        GenBank (rel. 77.0)
XX
SQ   Sequence 512 BP; 184 A; 43 C; 39 G; 246 T; 0 other;
     aagctttaga gtttcttaat caatactctc gggtattgaa tgaaacgatt tgctgagact        60
     taaccgtaat ttctatttaa atttatataa aattactcat tttaaaaagg ttattctttc       120
     tttttttatt tatttaatat aaatttattg atatttattg ttttttatca ttaaatattt       180
     aaattaattg attgtctttc ttttttatca tttaaataaa taatatttaa tatctcaaaa       240
     aatatcaact aaagtataaa tattcataag gtaaatgttg ttcataatta aattctaaac       300
     atttattatt ttaatattct ttaatgattg attaattgat tgtctttctt tttttatttg       360
     attgtctttc ttttttatca tttaaataaa taatatttaa tatctcaaaa aatatcaact       420
     aaagtataaa tattcataag gtaaatgttg ttcataatta aattctaaac atttattatt       480
     ttaatattct ttaatgattg attaattgat tg                                     512
//
ID   EHINV2    repbase; DNA; INV; 225 BP.
CC   EHINV2 DNA
XX
AC   X61182;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   E.histolytica inverted repeat downstream of rRNA genes.
XX
KW   Inverted repeat; repetitive sequence.
XX
OS   Entamoeba histolytica
CC   Entamoeba histolytica
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina;
OC   Rhizopoda; Lobosa; Gymnamoeba; Schizopyrenida; Tubulina;
OC   Entamoebidae.
XX
RN   [1]
RP   1-225
RC   [1]  (bases 1 to 3699)
RA   Bhattacharya S.;
RT   "Direct Submission";
RL   Submitted (01-AUG-1991) S. Bhattacharya, Jawaharlal Nehru
RL   University, School of Enviromental Sciences, New Delhi 110067,
RL   INDIA
XX
RN   [2]
RP   1-225
RC   [2]  (bases 1 to 3699)
RA   Mittal V., Sehgal D., Bhattacharya A., Bhattacharya S.;
RT   "A second short repeat sequence detected downstream of rRNA genes in
RT   the Entamoeba histolytica rDNA episome.";
RL   Mol. Biochem. Parasitol. 54, 97-100 (1992)
XX
DR   GENBANK; X61182; 77.0.
CC   Positions    1533    1757  Accession No X61182        GenBank (rel. 77.0)
XX
SQ   Sequence 225 BP; 96 A; 21 C; 18 G; 90 T; 0 other;
     aatgtttctt agtactatta acatttgaat tgaaaatagt ttaaataata ttatagtttt        60
     ttaatataat ggatcttctt aaaaatagaa atttaaaata gataacactt ccttcatatg       120
     tcttgaataa aaatgtatct actatttgaa tataaactat tctataaata gaacattaaa       180
     taaaatattt tataatatct cagttataca acgttcagaa ttaat                       225
//
ID   EVSAT1    repbase; DNA; INV; 106 BP.
CC   EVSAT1 DNA
XX
AC   M31306;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   E.vuilleti satellite DNA.
XX
KW   Satellite repetitive element; EVSAT1.
XX
OS   Eupelmus vuilleti
CC   Eupelmus vuilleti imago DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Eupelmidae.
XX
RN   [1]
RP   1-106
RC   [1]  (bases 1 to 106)
RA   Bigot Y.B., Hamelin M.H., Periquet G.;
RT   "Heterochromatin condensation and evolution of unique satellite-DNA
RT   families in two parasitic wasp species: Diadromus pulchellus and
RT   Eupelmus vuilleti (Hymenoptera)";
RL   Mol. Biol. Evol. 7, 351-364 (1990)
XX
DR   GENBANK; M31306; 77.0.
CC   Positions       1     106  Accession No M31306        GenBank (rel. 77.0)
XX
SQ   Sequence 106 BP; 33 A; 28 C; 24 G; 21 T; 0 other;
     accgattgaa atttcataaa atgcccgaaa atccctgtag acgatgtcca ggtgtcagga        60
     tgacccccag gtcgacgtaa caccatctac gaggaatgca ccaggt                      106
//
ID   FALCI     repbase; DNA; INV; 144 BP.
CC   FALCI DNA
XX
AC   X04970;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.falciparum repeated element falci.
XX
KW   Repetitive DNA element.
XX
OS   Plasmodium falciparum
CC   Plasmodium falciparum
OC   Eukaryota; Animalia; Protozoa; Microspora; Microsporea;
OC   Microsporida; Haemosporina; Plasmodiidae.
XX
RN   [1]
RP   1-144
RC   [1]  (bases 1 to 144)
RA   Rao A.S., Green T.J., Guntaka R.V.;
RT   "Organization of Plasmodium falciparum genome: ii. sequence analysis
RT   of falci element";
RL   Nucleic Acids Res. 14, 9542-9542 (1986)
XX
DR   GENBANK; X04970; 77.0.
CC   Positions       1     144  Accession No X04970        GenBank (rel. 77.0)
XX
SQ   Sequence 144 BP; 55 A; 12 C; 26 G; 51 T; 0 other;
     aattaagact atgttagtga agttaagact tagttagtca agttaagact ataattgttg        60
     aagtatgact ttattactta atttaagatc taagttagta aatgtaagac ctaagttagt       120
     taaggaaaga tctacgttag tcaa                                              144
//
ID   FR1       repbase; DNA; INV; 189 BP.
CC   FR1 DNA
XX
AC   X78688;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   FR1 repeated sequence.
XX
KW   Repetitive element.
XX
OS   Spodoptera frugiperda
CC   fall armyworm.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa/Eumycota group;
OC   Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Neoptera; Holometabola; Lepidoptera;
OC   Ditrysia; Noctuoidea; Noctuidae; Spodoptera.
XX
RN   [1]
RP   1-189
RC   [1]  (bases 1 to 189)
RA   Lu Y.J., Kochert G.D., Isenhour D.J., Adang M.J.;
RT   "Molecular characterization of a strain-specific repeated DNA in the
RT   fall armyworm Spodoptera frugiperda (Lepidoptera, Noctuidae)";
RL   Unpublished
XX
RN   [2]
RP   1-189
RC   [2]  (bases 1 to 189)
RA   Adang M.J.;
RT   "Direct Submission";
RL   Submitted (07-APR-1994) to the EMBL/GenBank/DDBJ databases. M.J.
RL   Adang, University of Georgia, Dept of Entomology, Athens, GA 30602,
RL   GREECE
XX
DR   GENBANK; X78688; 89.0.
CC   Positions       1     189  Accession No X78688        GenBank (rel. 89.0)
XX
SQ   Sequence 189 BP; 54 A; 34 C; 36 G; 65 T; 0 other;
     gaattcgtgt aaaacgtact ttctttgttt ttctatgaga gaagacattg gttgaccttt        60
     ttacaccggt cacaacgaat attcgtgatt gcacttccac tacaatctgt ttcacggatg       120
     agttgaagga aatatcggat aagcattctt tgtcggaaat cataatataa aacgtgctct       180
     tctatgtcg                                                               189
//
ID   RP1_GL    repbase; DNA; INV; 830 BP.
CC   RP1_GL DNA
XX
AC   L11331;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Giardia lamblia repetitive fragment showing homology with 3'
DE   non-coding region of a surface antigen gene.
XX
KW   Repetitive element.
XX
OS   Giardia lamblia
CC   Giardia lamblia (individual_isolate Ad-1) replicative form DNA.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Zoomastigophora; Diplomonadida; Diplomonadina; Hexamitidae.
XX
RN   [1]
RP   1-830
RC   [1]  (bases 1 to 830)
RA   Ey P.L., Khanna K., Andrews R.H., Manning P.A., Mayrhofer G.;
RT   "Distinct genetic groups of Giardia intestinalis distinguished by
RT   restriction fragment length polymorphisms";
RL   J. Gen. Microbiol. 138, 2629-2637 (1992)
RX   MEDLINE; 93139758.
XX
RN   [2]
RP   1-830
RC   [2]  (bases 1 to 830)
RA   Khanna K., Mayrhofer G., Ey P.L.;
RT   "A 0.8-kb repetitive fragment of Giardia intestinalis DNA showing
RT   homology with the 3' non-coding region of a surface antigen gene";
RL   Unpublished (1993)
XX
DR   GENBANK; L11331; 89.0.
CC   Positions       1     830  Accession No L11331        GenBank (rel. 89.0)
XX
SQ   Sequence 830 BP; 138 A; 219 C; 266 G; 207 T; 0 other;
     gatccattga attgtgttgc tgtctgagtt ccaatagttt ttgtttccgc tcttctgtag        60
     aaaggttaag atgaaaggat gtcataaggg catctctctg ctgcaatatg atcaaggagt       120
     caaaggggct gccctccaca gctgactccc gaagctcgat tgatctcacg ggcaattctt       180
     attcaatttc tggccgtccg gagatgaggg ttggttttgg ataacataac gagagagtcc       240
     tctccagtga tatatccaga gcctagcgcc ttccccggtc gctccgcagg gggtgtgctc       300
     agaccgaatg cgtacttcgg tcctttcggg gttcaggcct tcttacggac tctctggtcc       360
     accaatggcg cctcttcttg gtcttccttc gtggcgggtg aagctccggt cgctgtcttt       420
     tttagatgcc ccgtctgtcg ggggctgcca tcgggctctc cgctggctgg gccctcggtg       480
     tccgggcagc tgtggctcga gtcagcgctc ccacagtcca gtcacctgtg tctcagtggg       540
     ccggctggtg ggtggggcgg gggtatgggg cggtgaggct ggaggggctc tggtgggacc       600
     aggtggtggg tgttcgtatg tgcccctgag ctcctgatga gtggggtgat cgcagctgtg       660
     gtgactgggg gctgtccatc tgtgactcac ccctctgtgt gctcgtggtc tgtgagtgcc       720
     tccacccaga caacgcctca ggagccgtgc acaccgggac agagaggatg accaaggggg       780
     tcaagcagcc ccgctacgag agatgagagt gcacagcaac cagcctgatc                  830
//
ID   GLSAT2    repbase; DNA; INV; 142 BP.
CC   GLSAT2 DNA
XX
AC   M11264;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   G.lateralis satellite DNA.
XX
KW   Satellite repetitive element; GLSAT2.
XX
OS   Gecarcinus lateralis
CC   Land crab (G.lateralis) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Malacostraca;
OC   Eucarida; Decapoda; Pleocyemata; Brachyura; Brachyrhyncha;
OC   Grapsidoidea; Gecarcinidae.
XX
RN   [1]
RP   1-142
RC   [1]  (bases 1 to 2639)
RA   Fowler R.F., Bonnewell V., Spann M.S., Skinner D.M.;
RT   "Sequences of three closely related variants of a complex satellite
RT   DNA diverge at specific domains";
RL   J. Biol. Chem. 260, 8964-8972 (1985)
XX
DR   GENBANK; M11264; 77.0.
CC   Positions     627     768  Accession No M11264        GenBank (rel. 77.0)
XX
SQ   Sequence 142 BP; 57 A; 35 C; 36 G; 14 T; 0 other;
     aacaagaaga acaagacgaa gaaagaagag gaataacatc aacaacacca agaagagcac        60
     ggacgactac aacaaggaga gggggaaggc aggaaggaat tgccgcgtgg cacattccgc       120
     atttcaccaa gctcccctct cc                                                142
//
ID   GLSAT3    repbase; DNA; INV; 312 BP.
CC   GLSAT3 DNA
XX
AC   M10378;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   G.lateralis 'gc' rich satellite DNA.
XX
KW   Satellite repetitive element; GLSAT3.
XX
OS   Gecarcinus lateralis
CC   Gecarcinus lateralis DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Malacostraca;
OC   Eucarida; Decapoda; Pleocyemata; Brachyura; Brachyrhyncha;
OC   Grapsidoidea; Gecarcinidae.
XX
RN   [1]
RP   1-312
RC   [1]  (bases 1 to 312)
RA   LaMarca M.E., Allison D.P., Skinner D.M.;
RT   "Irreversible denaturation mapping of a pyrimidine-rich domain of a
RT   complex satellite DNA";
RL   J. Biol. Chem. 256, 6475-6479 (1981)
XX
DR   GENBANK; M10378; 77.0.
CC   Positions       1     312  Accession No M10378        GenBank (rel. 77.0)
XX
SQ   Sequence 312 BP; 49 A; 79 C; 71 G; 93 T; 20 other;
     agcgcagtgt ggcggctgac gatgcaccgc gatacgccga taccggacag tttccttgct        60
     tatgtacgga tgcaataatg ttattgctta attcttcttg ttgttcttct cgcctttctt       120
     ctccttgttc ttcttctttc ttctccttgt tacagttgct tgccgcacnn nnnnnnnnnn       180
     nnnnnnnncg tgctggaatt ggttgttcct ctcccccttc tgtccttcct taacgacgca       240
     ccgtgtaagg cgtaaagtcg ttcgaaggga gaggatggaa cagatcccgt acgcacggga       300
     ggagcgctca cg                                                           312
//
ID   GPRP1     repbase; DNA; INV; 374 BP.
CC   GPRP1 DNA
XX
AC   X85444;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   G.pallida repetitive DNA element.
XX
KW   Repetitive element.
XX
OS   Globodera pallida
CC   Globodera pallida.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea;
OC   Diplogasteria; Tylenchida; Tylenchina; Tylenchoidea.
XX
RN   [1]
RP   1-374
RC   [1]  (bases 1 to 374)
RA   Burrows P.R., Smoker M., Grisi M.E.S.;
RT   "Sequence and genomic organisation of a novel repetitive DNA
RT   element from the potato cyst nematode Globodera pallida";
RL   Unpublished
XX
RN   [2]
RP   1-374
RC   [2]  (bases 1 to 374)
RA   Burrows P.R.;
RT   "Direct Submission";
RL   Submitted (16-MAR-1995) to the EMBL/GenBank/DDBJ databases. P.R.
RL   Burrows, IACR-Rothamsted, Harpenden, Hertfordshire, AL5 2JQ, UK
XX
DR   GENBANK; X85444; 89.0.
CC   Positions       1     374  Accession No X85444        GenBank (rel. 89.0)
XX
SQ   Sequence 374 BP; 119 A; 65 C; 70 G; 120 T; 0 other;
     agctttacca catcatttca tagtggttcc aattgtttcc cgggctaggg aataaaaata        60
     aatttattat aattttttaa attatcccaa tgcgcccaaa catagggggt acccttttgc       120
     tggtgatatt tggtgtacaa aataattcat aaaaaattta tttatcaagc cctagggaag       180
     caattgtcgc actgtatatt tcatctcctg atccttattg gacaaaaatt agcctcccat       240
     acatgcgttg aatgggtgat atagggtggg gtcgtactac aaaaatggac aaaaatggac       300
     aaaaatattt ttaaatttcc gggagtctcc tgagcatcac agcacatgta tgggaggcta       360
     atttttgttc aata                                                         374
//
ID   GQRP1     repbase; DNA; INV; 85 BP.
CC   GQRP1 DNA
XX
AC   J01056;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   G.quinquedens highly repetitive DNA fragment.
XX
KW   Repetitive sequence.
XX
OS   Geryon quinquedens
CC   Crab (Geryon quinquedens) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Malacostraca;
OC   Eucarida; Decapoda; Pleocyemata; Brachyura; Brachyrhyncha;
OC   Portunoidea; Geryonidae.
XX
RN   [1]
RP   1-85
RC   [1]  (bases 1 to 85)
RA   Christie N.T., Skinner D.M.;
RT   "Selective amplification of variants of a complex repeating unit in
RT   DNA of a crustacean";
RL   Proc. Natl. Acad. Sci. U.S.A. 77, 2786-2790 (1980)
XX
DR   GENBANK; J01056; 77.0.
CC   Positions       1      85  Accession No J01056        GenBank (rel. 77.0)
XX
SQ   Sequence 85 BP; 18 A; 28 C; 14 G; 25 T; 0 other;
     agcttatcac cacctgtaac aacttttttt gtataagtcc ccaagcgctt caccgtgcca        60
     cagccctgct tttggccgtc aagct                                              85
//
ID   MARINER_HC repbase; DNA; INV; 1255 BP.
CC   MARINER_HC DNA
XX
AC   M63844;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   H.cecropia mariner-like repetitive element.
XX
KW   Highly-repetitive sequence; mariner-like element, HCMARINER.
XX
OS   Hyalophora cecropia
CC   Hyalophora cecropia pupae DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata;
OC   Gelechioidea; Coleophoridae.
XX
RN   [1]
RP   1-1255
RC   [1]  (bases 1 to 1255)
RA   Lidholm D.-A., Gudmundsson G.H., Boman H.G.;
RT   "A highly repetitive, mariner-like element in the genome of
RT   Hyalophora cecropia";
RL   J. Biol. Chem. 266, 11518-11521 (1991)
XX
DR   GENBANK; M63844; 77.0.
CC   Positions       1    1255  Accession No M63844        GenBank (rel. 77.0)
XX
SQ   Sequence 1255 BP; 405 A; 262 C; 234 G; 354 T; 0 other;
     ttaatattag gtccttacat atgaaattag cgttttgtcg tactgaccac tttgatctga        60
     aatatctcct ctttggttaa gaattccaat tccaattcat ttagctggta catttgagat       120
     ttgaaaacag tcattcattt gttttttcct cattattttt tccttaggca tcgtttatta       180
     ccgcacaatg gcaaacatga aatatcggta tatttacgag tacgagttct accgtggcac       240
     cagtgctgca gaaacagctc gaaggattaa taatgtatac ggtgctggtg ccgcaaaaga       300
     aagcaaggta cgtttttggt ttcaacgttt tcgttctgga attttcgacc ttcagaacca       360
     accccgtgga cggccggaga tcaaagtgga aaatgaagaa taaaggctat tgtgtaagcg       420
     gatccatcac aaagcacttc agagatagct gcaggcttcg gggtaagtga taaaactgta       480
     ttaatctact tgaagcaaat cggaaaagta aaaaaacttg aatgatgggt acctcatgaa       540
     ttgagtgaat cgaacttgca aacacgcgtc gactgctatg ttactttgct caaccgacac       600
     aataatgaac gaaaaatgta cgataatcgg aagggctcgt tgcaatggct gaaccctgga       660
     gacccagcca aatcctgccc taaacgataa ttgactcaga aaaagttact tgtgagtgtt       720
     ttggtggact agcgccggtg tcattcacta cagctttcta aaatgtggcc aaacgattac       780
     agtagatatc tattatcagc aactgcaagc catgaaggaa gaactagctg ctaaacatcc       840
     gagattggtc aatcgctcta ggtcactgct gcttcacgac aacgcaagac cacacactgc       900
     taaacaaaca accactaagt taaataagct acaattggaa tgtctgcgac atccaccgta       960
     ctccccggac cttgctccaa tagattacca ttttttccga aatttggaca acttcttaca      1020
     tggaaaaaaa ttcaactcct attcggtagt ccaaaccgcc ttcaaagagt ttattgatcg      1080
     tcgcccccat gcttttttta ataaagggat caatgaacta cctgtaagat ggcaaaagtg      1140
     cataaataac aacggtgcat actttgataa attaaatata ttttacaaaa aaataattga      1200
     cttcttattc ctcccttaca aaacgccaat ttcatatgta aggacccaat attaa           1255
//
ID   HHAI_BMA  repbase; DNA; INV; 322 BP.
CC   HHAI_BMA DNA
XX
AC   M12691;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Brugia malayi Hha I-repeat family element.
XX
KW   Repetitive element; HHAI.
XX
OS   Brugia malayi
CC   Brugia malayi DNA.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Spiruria;
OC   Spirurida; Spirurina; Filarioidea; Gnathostomatidae.
XX
RN   [1]
RP   1-322
RC   [1]  (bases 1 to 322)
RA   McReynolds L.A., DeSimone S.M., Williams S.A.;
RT   "Cloning and comparison of repeated DNA sequences from the human
RT   filarial parasite Brugia malayi and the animal parasite Brugia
RT   pahangi";
RL   Proc. Natl. Acad. Sci. U.S.A. 83, 797-801 (1986)
XX
DR   GENBANK; M12691; 77.0.
CC   Positions       1     322  Accession No M12691        GenBank (rel. 77.0)
XX
SQ   Sequence 322 BP; 117 A; 32 C; 36 G; 137 T; 0 other;
     gcgcataaat tcatcagcaa aattaataaa actttcaatt aatcatgatt ttaattgaat        60
     gtaagaattt aaattaaatt taaattcaaa tttaaatttt taatttttta aaaattttaa       120
     aatttgttat agttttcctt cattagacaa ggatattggt tctaatttat caattttaat       180
     tctaattaag tgccaaaact actaaaaaaa gcttattttg aaattaattg actacgttag       240
     ctgcattgta ccagtgctgg tcgtgtattg tgttgtcatt ttatagttta aatattaaaa       300
     tacgcttttg taattaagtt tt                                                322
//
ID   HTE1      repbase; DNA; INV; 391 BP.
CC   HTE1 DNA
XX
AC   M27873;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Holothuria tubulosa repetitive element, clone HTE-1.
XX
KW   Repetitive element; HTE1.
XX
OS   Holothuria tubulosa
CC   Holothuria tubulosa DNA.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Holothuroidea; Aspidochirotacea; Aspidochirotida; Holothuriidae.
XX
RN   [1]
RP   1-391
RC   [1]  (bases 1 to 391)
RA   Sainz J., Azorin F., Cornudella L.;
RT   "Detection and molecular cloning of highly repeated DNA in the sea
RT   cucumber sperm";
RL   Gene 80, 57-64 (1989)
RX   MEDLINE; 90006786.
XX
DR   GENBANK; M27873; 89.0.
CC   Positions       1     391  Accession No M27873        GenBank (rel. 89.0)
XX
SQ   Sequence 391 BP; 130 A; 76 C; 50 G; 135 T; 0 other;
     aattcaaaaa atcagctatt cggcaccata ggtcaacgcg ctgcttattt ttctactttc        60
     ggttaaaata tcaagtcatt tcaataattc attcaacaga aacagttggt acattgtgtc       120
     aatgtaattc cacccagtta atagtcacga accgaaaatt tagtaacttt ttaaagttcc       180
     accatttcaa gtacctttgt tttctttata tgttcataaa aatccaaatc caattccata       240
     ggtcaacttg tcgtcaccat ttttacccat gtagaagata taatgtcgaa atctgtattt       300
     gatcaagata tataaagggt acatcaaagt tctttacagg attcttaaaa ctgaaaaaag       360
     tcctaacatt tcctcgtatt cttgcttcat g                                      391
//
ID   INGI      repbase; DNA; INV; 5204 BP.
CC   INGI DNA
XX
AC   M16068;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.brucei repetitive element ingi3.
XX
KW   Ingi repetitive sequence; repetitive sequence.
XX
OS   Trypanosoma brucei
CC   T.brucei DNA, clone ingi3.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-5204
RC   [1]  (bases 1 to 5204)
RA   Kimmel B.E., Ole-Moiyoi O.K., Young J.R.;
RT   "Ingi, a 5.2-kb dispersed sequence element from Trypanosoma brucei
RT   that carries half of a smaller mobile element at either end and has
RT   homology with mammalian LINEs";
RL   Mol. Cell. Biol. 7, 1465-1475 (1987)
XX
DR   GENBANK; M16068; 77.0.
CC   Positions       1    5204  Accession No M16068        GenBank (rel. 77.0)
XX
SQ   Sequence 5204 BP; 1421 A; 1348 C; 1375 G; 1060 T; 0 other;
     gaattccctg gcgatgccgg ccacctcaac atggtgccag ggtccagtac cccgtatcat        60
     cttgggaagc taagagccag cagcgttcct ttcatgggaa acactgcttt gctccggcta       120
     cggcatcata cagcacaggg atcagcagcg tcttgctggg acaccgtttt tcatttgtcg       180
     gtccctgggc acgtgccagc gtgccatcag cagtatcatc cgcactaaga tgctgcttta       240
     tggtgatgtg gaagagaatc ccagcccctc gttgtgcggg atgcagtgga actgcgccgt       300
     gctatctcaa ggaaagagat tagcactcca caaaaccctt gtcgatgagc ggatcgcctt       360
     ttgtttgttg agcgagacaa ggacgacgcc tggagaggcg gcttgcttta gcgttgctgg       420
     ctactaacat cacggaatag ctcgtaactg caaaggaggt ggtggatcaa tactagtgag       480
     aggggaacta ccagtcgaga ccggtatggc agttgttggt cgcattgaac aagtgcatgc       540
     aacaattcac cttgcacgtg gaacggcgct gactgtcacg tcggcataca tcccaccaaa       600
     acacaccttc acggcaactg acctagatac gcttctgaca actgacggtg cccagctcat       660
     cggtgcagac gctaacgcac acgcgttggc atgggatcgc gcgagcccac caaataccaa       720
     gggtgaaacc ctcacacagt ggtgcattga caaccagttt ctggtctgaa acactggtga       780
     gtgcaccagg tatgcgcgcc accacgggga gtccacccct gatgtgacgc tgtcaaggaa       840
     ttgcacagtg tacacgtgga catcgctgta ttctcccgat agcgatcacc atcatatatt       900
     tttcgacgtt atcgttggag aggacacaga tgcactgagt tgcccgcggc ttcgaaagcc       960
     catgtacgca tggctaaaat ctgactggag taatttccgt ctcaaggttg acgagctctg      1020
     caggaaaatt ggtagagaga agaacgtcaa caccctggaa cagaaattga gctccgccat      1080
     ccgcattgga cacctgcgct cgcgaaactc gatgaagaga tcgctggatg cggaccctcc      1140
     cgccgaaggg aaaagttggt agccacgcgt aagcagatcc tggaccgtac cacaaagaag      1200
     agatggagca cgctatgctc cagacttgcg gtgtcagacc gctgcagttg gcacattgtc      1260
     aagaaggtat atgcgccacg accactaacc acaccggctg tacttgttga ttacgcggcc      1320
     atcacggact accgtcaagc tgagaggttc agtaaactgt actcgtcccg cgcaagaagg      1380
     caccccgact cacacccacc agcaccaata aagacgatag cgagtgagtt cagtcccatc      1440
     acgatggctg aactacggag atcgatcaaa ctgctaccga gtggatccgc agccggacct      1500
     gattgcttat acaacgaggc actacaacat ctcggcataa cagcactgaa tgttgttctg      1560
     aggctattca atgagagcct acgaacggga gtcgtgccgc ctgcatggaa gactggtgtt      1620
     atcatcccca tcctgaaggc cggaaaaaag gcggaggacc tcgattctta cagacctgtg      1680
     acgctcacaa gctgtctctg caaagtcatg gagcgcataa ttgccgcgag acctagagac      1740
     actgttgagt cccagctgac gccgcagcaa tcaggctttc gccccggatg ctcaacgctc      1800
     gaacaactcc tgcacgtccg cgctgccctc tgccaccaca cgcaccaata tcgtacgggt      1860
     gctgtattcg tcgactacga gaaggcattt gatacagtag accacgacaa aattgcgagg      1920
     gaaatgcaca gaatgaaggt atcaccccac attgtgaagt ggtgcgtatc atttctgagt      1980
     aaccgaactg gcagagtgag attcaaggag aagcttttca gaagcagaac atttgagcga      2040
     ggagtgccac aaggaactgt ccctggttcg ataatgttca ttattgtcat gaactcgttg      2100
     agccaacgcc ttgcagaagt gccgttactg cagcacggat tctttgcaga cgacctgacg      2160
     ctactggcga ggcacacaga gagggatgtc atcaaccaca cgctacaatg cggcctaaac      2220
     gtggtgttac agtggtcaaa agagtacttc atgtctgtca acgtagcgaa aacaaagtgc      2280
     acactcttcg ggtgtacaga gcgccacccc cttacattac aactggacgg cgaaagaata      2340
     ggagctgaca ggacaccgaa gcttctagga gtaacattcc agtgtctgca ggggatggca      2400
     acgcatgcgg ccgaaacgag acgcaagatg gacttccgac tactgaagat ttcagccatc      2460
     tcagcttcta catgggggcc aagacgacaa gtactgagag ctttttatct agcactcgta      2520
     caggcacaca ccatgtatgg cattgaggca tggtactggg atgcttggaa acgaagtcgc      2580
     gacctccttg catcagcaca acacaaagcc agttgcatca tagctggcat accgcatggg      2640
     acgcaaaaag aggactctct gctggaagca aacctcctgc cactcaagac ggccactctt      2700
     gtgtgcagca tgaaattcat gctgatgtgt gagtcacgag gcggatgttt gagccgcagt      2760
     gaagaagtat acaacagcaa acacccagtc agagccctac attcccgcat catgcggtcc      2820
     tacccccacc tccgcattga gccacgcgag cacccactag agacatcgac gctccgccac      2880
     agctgccgac cgatatttca cacgcagata aagcctgtgt gcgctgatga ccctgaagat      2940
     gttaaaaggg aggcttccga aaaatggttt gcacggcatt ttgcacggat ggggaaggag      3000
     ccaccgcggc gagagcacta caaattgtgg actgatggat ccgtgtccct cggtgagaag      3060
     tccggagcag ctgccctgct ccatagaaac aacacgctga tttgtgcacc caagaccgga      3120
     gcaggggaac tctcgtgcag ttacagagcg gaatgcgtag cattagagat aggactgcaa      3180
     cggctgctga aatggcttcc ggcatacaga agcacaccga gcaggttgtc catcttctct      3240
     gactcgctgt caatgttaac agcactgcag acaggtcccc tagccgtaac ggacccaatt      3300
     ctaagacgac tatggaggct tctgcttcaa gttcagagaa ggaagatacg tatccgactg      3360
     caatttgtgt ttgaccattg tggcgtgaaa cggaatgagg tttgcgatga aatggccaaa      3420
     aaggccgcag atttaccaca gttgcgagac acatggatcc ccgacatcat tgcttatgcg      3480
     aagcgagtgc ttaggtcgta agaagtccat gagaacactc ataggtttgg tatcacgggc      3540
     aaccactttc caacaaaaca taaagaagaa ctaacaatgg aagaagaaac ggcactggca      3600
     cgctttcggg ttgggtcttc aagacactat ggatggatgt tgcgaaagat caacccgagt      3660
     gtgcctccac agtgccgatg gtgcaacccg caacatgcag cgatggggcc aacaatacaa      3720
     acagccccaa ctgttgcgac acgcactctt cagagaacct ccgaaccgac aaaatgtacg      3780
     gaatgtgatg ccacatacca atgccgctcg agtgctgtaa cgcacatggt aaacaaacat      3840
     ggctttgtgc gagctgatgc cctcctgagg atcaaatacg gcgatgcaac acctgcagtg      3900
     gatatccccc cggagccccc tccagtggtg gcgatcgttc ctctaccatc gagcacacga      3960
     gtcccgatga gaccgcaggt gcttcattgt accctctgta cctccaaatt cgcagtgcca      4020
     ggccgactat tacaccacct tagaacaata catggcatag gtagcagtag ttgccgcgtg      4080
     aaaagggggc gagaaaacgg ggactcattg caaggagatg gtagcgtccc agtagcacca      4140
     gctcctcagg atacacggaa gctgctgttt caatgtgacc tgtgcgaggc gagcttcggt      4200
     acacgctctt ccctgtcact acacaagaaa ttcaaacata agagcatagt gacgaaggac      4260
     ggtaccgtgg tgttggtgca attccctcgt aagcgtgccc gtgagggaaa aattgacgcc      4320
     actggggaaa ggagaggtgc agtgtggtgt gtgccaaaaa gtgctcagtt gcagggactc      4380
     cctcatccga cactgtaagg ctttccacaa aggtgaggga gtcgagctta aatgcagcaa      4440
     aagcacaaaa ttttgtgcca ctgattcccc gcatacaaac acatccatgt tggtgtgctc      4500
     gacatgcgga aagcagtgtg ctagcaaaac tggcctcacc ctacatcaaa agcagatgca      4560
     cggtatgaag gtagagcgcg ctgttaccag ccaacgcggc gactgcgaag aaacgtcgct      4620
     gcacttgatg agctgttccg gtttgaagga gttacgtgtt aggtttgcgg tggaaggtgt      4680
     gtgtgcgcag gatatatgtc tttctaaaag gctggcgcaa tttctcattg cggttgaacg      4740
     gagccggccg caggtgaagt cctcacctaa ggtaacagtc atacaaccca ctctcccttc      4800
     tgcaacttcc cagcttattg ccgagtgtgg agctagcagg aaaagcaccg gacgcaggaa      4860
     tagtccagac acactcagag acagaggggg tatgcagtca acaagcaaca gaaacagaaa      4920
     gggagagaga ataataaacg aataacaaaa atcaaaacaa aaggattgct aattgacatc      4980
     ttcgggagag tccggggtgg gtggcttctc gccccatctg ctgtattccg ttcaactgcg      5040
     gagctacaac aaaaattata gagggtgtgt taggatgaat aaaaaaggga gactctgcca      5100
     cagtcgccag accgatagca tctcagggct ctacggtgat ggctgatggc cgcgccagtg      5160
     gggggaaact ctcacgaagg cacgaagaaa atttcaaaaa aaaa                       5204
//
ID   LARP1     repbase; DNA; INV; 214 BP.
CC   LARP1 DNA
XX
AC   L42484;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Leishmania aethiopica DNA repeat.
XX
KW   Repetitive element.
XX
OS   Leishmania aethiopica
CC   Leishmania aethiopica (strain 1,MHOM/ET/72/L100) DNA.
OC   Eukaryota; Protozoa; Euglenozoa; Kinetoplastidea; Trypanosomatida;
OC   Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-214
RC   [1]  (bases 1 to 214)
RA   Piarroux R., Fontes M., Perasso R., Gambarelli F., Joblet C.,
RA   Dumon H., Quilici M.;
RT   "Phylogenetic relationships between Old World Leishmania strains
RT   revealed by analysis of a repetitive DNA sequence";
RL   Mol. Biochem. Parasitol. (1995) In press
XX
DR   GENBANK; L42484; 89.0.
CC   Positions       1     214  Accession No L42484        GenBank (rel. 89.0)
XX
SQ   Sequence 214 BP; 50 A; 69 C; 65 G; 30 T; 0 other;
     gcaagaagca agaggcagtg tcacagagat gggcgaaggg ggacggtggg agcgggagag        60
     agaccgcggg cacgtggcga cgcccgtgaa atgaaaaaaa gcagaagacg cgtattccct       120
     tttgctgatg tgtgcctacc tctctgccac agatcacgac ctcagctccc ctccacccca       180
     acgcctcccc cgcgcggccc tgtcacaggc tccc                                   214
//
ID   LARP2     repbase; DNA; INV; 217 BP.
CC   LARP2 DNA
XX
AC   L42499;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Leishmania archibaldi DNA repeat.
XX
KW   Repetitive element.
XX
OS   Leishmania archibaldi
CC   Leishmania archibaldi (strain 1,MHOM/SD/00/LRC-L61) DNA.
OC   Eukaryotae; mitochondrial eukaryotes; Euglenozoa; Kinetoplastida;
OC   Trypanosomatidae; Leishmania.
XX
RN   [1]
RP   1-217
RC   [1]  (bases 1 to 217)
RA   Piarroux R., Fontes M., Perasso R., Gambarelli F., Joblet C.,
RA   Dumon H., Quilici M.;
RT   "Phylogenetic relationships between Old World Leishmania strains
RT   revealed by analysis of a repetitive DNA sequence";
RL   Mol. Biochem. Parasitol. (1995) In press
XX
DR   GENBANK; L42499; 89.0.
CC   Positions       1     217  Accession No L42499        GenBank (rel. 89.0)
XX
SQ   Sequence 217 BP; 54 A; 71 C; 66 G; 26 T; 0 other;
     gcaagaatca agaggcggtg tcacagagac gggcgaaggg ggacggcggg agcgggagag        60
     agagcgcggg cacacggcga cgtccgtgga aagaaaaaag gcagaagaca acgcgtattc       120
     ccttctgcta atgtgtaccc gcctctctgc cacagatcac gaggccagct ccactccacc       180
     ctaacgcctc ccccgcgcag ccctgtcaca cgctccc                                217
//
ID   LARRP1    repbase; DNA; INV; 212 BP.
CC   LARRP1 DNA
XX
AC   L42496;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Leishmania arabica DNA repeat.
XX
KW   Repetitive element.
XX
OS   Leishmania arabica
CC   Leishmania arabica (strain 1,MPSA/SA/83/JISH220) DNA.
OC   Eukaryota; Protozoa; Euglenozoa; Kinetoplastidea; Trypanosomatida;
OC   Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-212
RC   [1]  (bases 1 to 212)
RA   Piarroux R., Fontes M., Perasso R., Gambarelli F., Joblet C.,
RA   Dumon H., Quilici M.;
RT   "Phylogenetic relationships between Old World Leishmania strains
RT   revealed by analysis of a repetitive DNA sequence";
RL   Mol. Biochem. Parasitol. (1995) In press
XX
DR   GENBANK; L42496; 89.0.
CC   Positions       1     212  Accession No L42496        GenBank (rel. 89.0)
XX
SQ   Sequence 212 BP; 50 A; 68 C; 63 G; 31 T; 0 other;
     gcaagaatca agaggccgtg tcagagatgg acgaaggggg acggtgggag cgggaaagag        60
     acgacgggta cgtggcgacg cccgtggaaa gaaagataag ccaaagacgc gtattccctt       120
     gtgctgatgt gtgcccccct ctctgccaca gaccacgagc tcagctccac tccaccctaa       180
     cgccccctcg ccgtcccctg tcacaggctc cc                                     212
//
ID   LCSAT1    repbase; DNA; INV; 190 BP.
CC   LCSAT1 DNA
XX
AC   X57585;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   L.cuprina satellite DNA.
XX
KW   Highly repeated satellite DNA; satellite DNA;
KW   Repetitive sequence; LCSAT1.
XX
OS   Lucilia cuprina
CC   Lucilia cuprina
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
OC   Cyclorrhapha; Schizophora; Muscoidea; Calliphoridae.
XX
RN   [1]
RP   1-190
RC   [1]  (bases 1 to 190)
RA   Perkins H.;
RT   "Direct Submission";
RL   Submitted (31-JAN-1991) H. Perkins, Department of Biochemistry and
RL   Mol Biol, Australian National University, GPO Box 4, Canberra 2601,
RL   AUSTRALIA
XX
RN   [2]
RP   1-190
RC   [2]  (bases 1 to 190)
RA   Perkins H., Bedo D.G., Howells A.J.;
RT   "Characterization and chromosomal distribution of a tandemly
RT   repeated DNA sequence from the Australian sheep blowfly, Lucilia
RT   cuprina";
RL   Chromosoma 101, 358-364 (1992)
XX
DR   GENBANK; X57585; 77.0.
CC   Positions       1     190  Accession No X57585        GenBank (rel. 77.0)
XX
SQ   Sequence 190 BP; 54 A; 22 C; 37 G; 77 T; 0 other;
     gatcggtaga attatttttc caggtttaaa aaggcggtaa tctgaggttc cgatatggtt        60
     gtgaataact ttgacagttt tcatgctatg acagtcattt atgcatcatt ttaaagcatt       120
     atgattgcac tttaatttgg tatatcattt gtagcataat gtgtgttttt acaaattggt       180
     caatttgata                                                              190
//
ID   LDRP1     repbase; DNA; INV; 96 BP.
CC   LDRP1 DNA
XX
AC   M21009;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   L.donovani highly repetitive DNA.
XX
KW   Repetitive sequence.
XX
OS   Leishmania donovani
CC   L.donovani DNA, clone pRs2A.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-96
RC   [1]  (bases 1 to 96)
RA   Ellis J., Crampton J.;
RT   "Characterisation of a simple, highly repetitive DNA sequence from
RT   the parasite Leishmania donovani";
RL   Mol. Biochem. Parasitol. 29, 9-18 (1988)
XX
DR   GENBANK; M21009; 77.0.
CC   Positions       1      96  Accession No M21009        GenBank (rel. 77.0)
XX
SQ   Sequence 96 BP; 19 A; 28 C; 22 G; 27 T; 0 other;
     taaccctaac cctttttctc tccacttatc cttgcacagc gacaccctct ccaacaggac        60
     ggggcgtgac ggtgtactgg tgtatggtta gggtta                                  96
//
ID   LDRP2     repbase; DNA; INV; 76 BP.
CC   LDRP2 DNA
XX
AC   M21010;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   L.donovani highly repetitive DNA.
XX
KW   Repetitive sequence.
XX
OS   Leishmania donovani
CC   L.donovani DNA, clone pRs11A.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-76
RC   [1]  (bases 1 to 76)
RA   Ellis J., Crampton J.;
RT   "Characterisation of a simple, highly repetitive DNA sequence from
RT   the parasite Leishmania donovani";
RL   Mol. Biochem. Parasitol. 29, 9-18 (1988)
XX
DR   GENBANK; M21010; 77.0.
CC   Positions       1      76  Accession No M21010        GenBank (rel. 77.0)
XX
SQ   Sequence 76 BP; 30 A; 24 C; 10 G; 12 T; 0 other;
     cccctaacat aacataataa ccctaacccc cccctctttg aaggaacgaa gaatcagtgg        60
     agagaaaaac cctaac                                                        76
//
ID   LGRP1     repbase; DNA; INV; 213 BP.
CC   LGRP1 DNA
XX
AC   L42498;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Leishmania gerbilli DNA repeat.
XX
KW   Repetitive element.
XX
OS   Leishmania gerbilli
CC   Leishmania gerbilli (strain 1,MRHO/CH/60/GERBILLI) DNA.
OC   Eukaryota; Protozoa; Euglenozoa; Kinetoplastidea; Trypanosomatida;
OC   Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-213
RC   [1]  (bases 1 to 213)
RA   Piarroux R., Fontes M., Perasso R., Gambarelli F., Joblet C.,
RA   Dumon H., Quilici M.;
RT   "Phylogenetic relationships between Old World Leishmania strains
RT   revealed by analysis of a repetitive DNA sequence";
RL   Mol. Biochem. Parasitol. (1995) In press
XX
DR   GENBANK; L42498; 89.0.
CC   Positions       1     213  Accession No L42498        GenBank (rel. 89.0)
XX
SQ   Sequence 213 BP; 49 A; 65 C; 68 G; 31 T; 0 other;
     gcaagaatca agaggccgtg tcagagatgg gtcgaagggg gacggtggga gcgggaaaga        60
     gacgacgggc acgtggcgac gctggaaaga aagaaaagca gaagacgcgt attccctttt       120
     gctgatgtgt gcccgcctct ctgccacaga ccacgagctc agctccactc caccctaacg       180
     ccccctcgcc gtgcggccct gtcgcaggct ccc                                    213
//
ID   LIRP1     repbase; DNA; INV; 218 BP.
CC   LIRP1 DNA
XX
AC   L42476;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Leishmania infantum DNA repeat.
XX
KW   Repetitive element.
XX
OS   Leishmania infantum
CC   Leishmania infantum (strain 2,MHOM/FR/94/LPM111) DNA.
OC   Eukaryota; Protozoa; Euglenozoa; Kinetoplastidea; Trypanosomatida;
OC   Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-218
RC   [1]  (bases 1 to 218)
RA   Piarroux R., Fontes M., Perasso R., Gambarelli F., Joblet C.,
RA   Dumon H., Quilici M.;
RT   "Phylogenetic relationships between Old World Leishmania strains
RT   revealed by analysis of a repetitive DNA sequence";
RL   Mol. Biochem. Parasitol. (1995) In press
XX
DR   GENBANK; L42476; 89.0.
CC   Positions       1     218  Accession No L42476        GenBank (rel. 89.0)
XX
SQ   Sequence 218 BP; 56 A; 70 C; 64 G; 28 T; 0 other;
     gcaagaatca agaggcggtg tcacagagat gggcgaaggg ggacggcggg agcggcaaag        60
     agagcgcggg cacacagcga cgtccgtgga gagaaaaaaa gagagagaca cacgcgtatt       120
     cccttctgct aatgtgtacc cgcctctctg ccacagatca cgaggtcagc tccactccac       180
     cctaacgcct cccccgcgca gccctgtcac acgctccc                               218
//
ID   LLRP1     repbase; DNA; INV; 817 BP.
CC   LLRP1 DNA
XX
AC   M91591;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   L.loa interspersed repetitive sequence.
XX
KW   Repetitive sequence; interspersed repeat.
XX
OS   Loa loa
CC   Loa loa (library: lambda-gt11) adult worm DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
OC   Orthorrhapha; Tabanoidea; Tabanidae.
XX
RN   [1]
RP   1-817
RC   [1]  (bases 1 to 817)
RA   Egwang T.G., Akue J.-P., Ajuh P.M., Pinder M.;
RT   "Cloning and characterization of a Loa loa specific repetitive DNA";
RL   Mol. Biochem. Parasitol. 56, 189-196 (1992)
XX
DR   GENBANK; M91591; 77.0.
CC   Positions       1     817  Accession No M91591        GenBank (rel. 77.0)
XX
SQ   Sequence 817 BP; 288 A; 124 C; 130 G; 275 T; 0 other;
     accgaataaa taactggagt gacttcttgt ctaggaatat tttccaatct aatttcactt        60
     ccacatgctt cttatttact ttatttgcac gcataatgag tctgtgaaga aaacccttcg       120
     ctatcctcat gaaaaagcat ttacatgtag atcaaattct cgaaattgga acggagacaa       180
     cgagtttcac ttcgattgaa acaagcagca tataaaagtg tcattgtcgt ctattgcgaa       240
     ttgtcatcta gcctggggtt tattaatggt ttgctaaatg gttataaata tcgttggatg       300
     actacagcag tgatcaattt gatgaggttg ttgtgtaaat acgttgtccc tcgttatccc       360
     ttctgactgt cgaacaaaca taaatatgct attctgccat tctgattata ccgttaaagg       420
     agaaaatcag agaatcattt acataaacct attattacta ttattattaa accaaatatt       480
     ttgatattcc aaaaagacta acaataacga tgaaagttga atttataact tcggtatgtt       540
     aagtcaaaag taaacaacct ttagaagcaa tttaatgtta gatatcgagt tataattata       600
     ttggaataga ttgttcaaat attgataaga tcaaacaaag attatcactg caaattaatc       660
     aaatatacag ttgatttttc attttcggaa ctttttaatg aataatgcca gaaagcaaga       720
     gttcactgga attgatttca agattactca gttaacttac taataatcaa atgatctata       780
     attagaatga tgaacagggt cttatgatag cgtaagt                                817
//
ID   LMRP1     repbase; DNA; INV; 214 BP.
CC   LMRP1 DNA
XX
AC   L42505;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Leishmania major DNA repeat.
XX
KW   Repetitive element.
XX
OS   Leishmania major
CC   Leishmania major (strain 5,MMEL/SU/79/MEL) DNA.
OC   Eukaryota; Protozoa; Euglenozoa; Kinetoplastidea; Trypanosomatida;
OC   Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-214
RC   [1]  (bases 1 to 214)
RA   Piarroux R., Fontes M., Perasso R., Gambarelli F., Joblet C.,
RA   Dumon H., Quilici M.;
RT   "Phylogenetic relationships between Old World Leishmania strains
RT   revealed by analysis of a repetitive DNA sequence";
RL   Mol. Biochem. Parasitol. (1995) In press
XX
DR   GENBANK; L42505; 89.0.
CC   Positions       1     214  Accession No L42505        GenBank (rel. 89.0)
XX
SQ   Sequence 214 BP; 52 A; 67 C; 67 G; 28 T; 0 other;
     gcaagaatca agaggccgtg ccagagatgg gcgaaggggg acggtgggag cgtgaaagag        60
     acgacgggca cgtggcgacg cccgcggaaa gaaagaaagc agaagacgcg tattccattg       120
     tgctgatgtg tgccagcctc tctgccacag atcacgagct cagctccact ccaccctaac       180
     gccccctcgc cgcacggccc tgtcacaggc tccc                                   214
//
ID   LTRP1     repbase; DNA; INV; 215 BP.
CC   LTRP1 DNA
XX
AC   L42495;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Leishmania tropica DNA repeat.
XX
KW   Repetitive element.
XX
OS   Leishmania tropica
CC   Leishmania tropica (strain 10,MHOM/MA/90/LEM1877-CL) DNA.
OC   Eukaryota; Protozoa; Euglenozoa; Kinetoplastidea; Trypanosomatida;
OC   Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-215
RC   [1]  (bases 1 to 215)
RA   Piarroux R., Fontes M., Perasso R., Gambarelli F., Joblet C.,
RA   Dumon H., Quilici M.;
RT   "Phylogenetic relationships between Old World Leishmania strains
RT   revealed by analysis of a repetitive DNA sequence";
RL   Mol. Biochem. Parasitol. (1995) In press
XX
DR   GENBANK; L42495; 89.0.
CC   Positions       1     215  Accession No L42495        GenBank (rel. 89.0)
XX
SQ   Sequence 215 BP; 51 A; 68 C; 65 G; 31 T; 0 other;
     gcaagaatca agaggcagtg tcacagagat gcgcgaaggg gggcggtggg agcgggagag        60
     agaccgcggg cacgtggcga cgtccgtgga accaaaaaaa agcagaagac gagtattccc       120
     ttttgctgat gtgtgaccac ctctctgcca cagatcacga gctcagctcc cctccaccct       180
     aacgcctccc ccgcgcggcc ctgtcacagg ctccc                                  215
//
ID   U1_LV     repbase; DNA; INV; 1398 BP.
CC   U1_LV DNA
XX
AC   X01749;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   L.variegatus repeat unit with gene for small nuclear U1 RNA.
XX
KW   Repetitive sequence; LVU1.
XX
OS   Lytechinus variegatus
CC   sea urchin
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Temnopleuroida; Toxopneustidae.
XX
RN   [1]
RP   1-1398
RC   [1]  (bases 1 to 1404)
RA   Brown D.T., Morris G.F., Chodchoy N., Sprecher C., Marzluff W.F.;
RT   "Structure of the sea urchin U1 RNA repeat";
RL   Nucleic Acids Res. 13, 537-556 (1985)
XX
DR   GENBANK; X01749; 77.0.
CC   Positions       1    1398  Accession No X01749        GenBank (rel. 77.0)
XX
SQ   Sequence 1398 BP; 429 A; 275 C; 261 G; 433 T; 0 other;
     aagctttcgg gtctactacc aactagagcc catggaacga gatattaaag agagcaaagt        60
     ataattttgc ccaagtaaga cgacgaccga taaaagaaag gttgacccga taacaggatg       120
     cgagtaagct gacgcttatg tcattataat ctgcaacgtc agtaaagtta ttgtgaagtt       180
     catgaatatt cacatcctta cttcttcaca tcttacgtgc aattttgtac ttgttattac       240
     gtttaaatta tagaattaca tggatacgtc attaatgttg ctccagagag gggcacagag       300
     atttgaggtt tctttctctc aaaacttgcc aaaattgtac aaattcataa aatcatgtga       360
     ctgttttctc tttgtagtgt gagatgtttc actgctttct atcgcagata agatttgatc       420
     aagtacggcg accgatggat ggggagcata cttacctggc gcaggggtcg cattgatcaa       480
     gaaggatgca cccccagggc gaggcttgcc attgcactcc ggcttgctga accttgcgat       540
     tcccccaaac gtggggaact cgggcgtaca atttatggta gcggagatct gcgttcgcgc       600
     tatctcctac aattcaacta atgcaaagaa agaaaataaa agctccccga aaaactctga       660
     tggtgacatg aatggactaa tcccttccaa tttttgggga atttcaacct tatcaggttt       720
     ttcaaaccac tagtttcttt attacttaag gggacatgat tggcattcct ttcaataaaa       780
     gctcgggttt aaatccgtgt gacaaaaata gcatactact ttaacatctg cttcatctca       840
     actgcgaaat gtatgtcgaa ataaactttg ctaagttttg aaagattcta atgagattta       900
     aaaaaaatga ttttccggca gattggctcg ctcattttac tcggtcgcaa gtttccgata       960
     aaaaccccct ccaaatagtt ttctcattga aacaacgtca tccaaaatac gtttcaagtt      1020
     aatccttcca atcaatacat attgtaactg ggtatatttt aaaacctatt ggcccatcgt      1080
     tgtttctttt ccatatgaac attagttagt ggttaaaagt tgcatcatga ttcgtaacta      1140
     aaaaaaaata aatgacccgt ttaaagcgtc agcttggacc aaccaacatt ttcgtcacca      1200
     atctataaaa aggtaaaata tccaggtgca tggtcatttc ccaggggtgg agtccaggtt      1260
     attgactact catttaatgt gtatgaacta gtttcgattt tgtggtgcat tttctcttta      1320
     tcccttgata tggaaataaa caatcatttt aactttatcg agatattaag cctcacattt      1380
     cattctaaaa tgagacga                                                    1398
//
ID   MAG       repbase; DNA; INV; 4564 BP.
CC   MAG DNA
XX
AC   X17219;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Bombyx mori retrotransposon MAG DNA.
XX
KW   Retrotransposon MAG.
XX
OS   Bombyx mori (silkworm)
CC   silkworm.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa/Eumycota group;
OC   Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Neoptera; Holometabola; Lepidoptera;
OC   Ditrysia; Bombycoidea; Bombycidae; Bombyx.
XX
RN   [1]
RP   1-4564
RC   [1]  (bases 1 to 4564)
RA   Garel A.;
RT   "Direct Submission";
RL   Submitted (20-DEC-1989) to the EMBL/GenBank/DDBJ databases. Garel
RL   A., Centre de Genetique Moleculaire et Cellulaire UMR106,
RL   Universite Lyon I, 43 Boulevard du 11 Novembre 1918, 69622
RL   Villeurbanne Cedex, France
XX
RN   [2]
RP   1-4564
RC   [2]  (bases 1 to 4564)
RA   Michaille J.J., Mathavan S., Gaillard J., Garel A.;
RT   "The complete sequence of mag, a new retrotransposon in Bombyx mori";
RL   Nucleic Acids Res. 18 (3), 674 (1990)
RX   MEDLINE; 90175012.
XX
DR   GENBANK; X17219; 89.0.
CC   Positions       1    4564  Accession No X17219        GenBank (rel. 89.0)
XX
SQ   Sequence 4564 BP; 1429 A; 867 C; 1067 G; 1201 T; 0 other;
     tgttatgttt gtaagtaagt attcacttca gtgtgtcaat aaacggtgaa cgcaacgtac        60
     gtgtctatta tttactagtg gcgaacgcgg aaaaaaaaaa tcaatttgtg gcttgtttgt       120
     ttcttgtttg gactaattaa aattatatga acataatgtc ggtgggacag ttgaaagaat       180
     tcgcggtaaa cagtggaaac tggtcctcat atgttgagag attggaaatg tacttttttc       240
     ctgaataaag tgactgacga tttaaattac ccacatttaa tttccattat gggtgaggaa       300
     agcgtacgat ttattatcga cattagccag cccttcgaag ccgtcacaat taacatatgc       360
     taatgctgta gcgatgttgg cagctcacct gcaaccgaag ccctcaatct tggcggaaag       420
     atacaagttt cgacaacgtc ggcagctgaa tgagtcaata gctgactacc tcacagaatt       480
     aaaaaaatta tcaaaaaatt gtgaattcgg ctcgtcgctg gatgaaaatc tgcgtgatca       540
     aatggtttgt ggattaaaga gcgaaatcat acggcaaagg ttatttgccg aggagaaatt       600
     agaatataag cgtgcagtta cgttagcttt gtcattagaa gctgcggaga gggatgcgat       660
     tgcagtggaa cgtacgccaa ttgaggaggt taacaaaatt aacttcaatg aatgttcaag       720
     atgtggagac aggagacacc aagcaaagga ttgcatatac aaagactacg tgtgcagttc       780
     atgtcatgaa accggccatc tacgaagaat gtgccccaaa aacgggctta agaaccaggc       840
     ggaggcagcc gggggttcag cacgcaccgg gcgccggggg aaccggggtg caggcggcaa       900
     caggcgatcg tggcgcgggc agcgagtgcg ggacgaggag gccgagagcg ggctcctttg       960
     cacttattat acgatcaaaa caacgatgac acatacaaca acttcaataa tgaacaggac      1020
     gggtgtggag aagaaaatga gcctatgtac caaatgacat tgagtaatta taaaccggtg      1080
     tgtattaaag ttaaagtcca aaattgcttg ctcaagatgg aggtcgatac tggatcggcg      1140
     ttatcttgta ttagcaagaa tgtttatgat aaatattttt ctaaggagaa gttacaggca      1200
     tgcttattaa atttaaaatt ttacgatggc tcaatcattc ggcctttagg gtttataaac      1260
     actatagtga agtaccaagg tgtttcaaaa atgttagact tgtatgtcat agacaaagga      1320
     acgactaatc tattgggccg acaatggtta gctgaattga atattaatat aaaaatatca      1380
     aaacctacga gttttaaaat acaacacagt aactttgtaa ccgaacacgc acgagactat      1440
     aataaattaa ttaatgaaat tgtttctaga cataaatcct tgttcgacgg cacattgggt      1500
     aaatatacgg ggggcacagc agagttaatc gtgcggccgg atgcggtgcc tatctactgc      1560
     cgcgcgcgac cggtgccgta tgcgctgcgc gagcgcgtcg atgccgagct cgacgcgatg      1620
     ctggccgccg gcgtcatcaa accggtggac cactccgact gggccacgcc acttgtcgta      1680
     gtacgcaaag cggacggcgg tctgagaata tgtgcggact ataaggtaac ccttaacaaa      1740
     gtattagcaa tcgacagatt tccggttcca aaaatggagg acttattcag taatctcagc      1800
     ggaaataaat tttttactaa gcttgattta tctcaagctt ataatcaaat agtcttatca      1860
     gaacgttcta gcgagtacac ggttatcaat acacatagag gattatttaa atattcccgc      1920
     ctcgtctacg ggttagcttc gagcccaggc atttttcaaa aactaatggt aaatatgttt      1980
     aaaaatgtcc caaatgtagt agttttctat gatgacatat tgattagaaa tcaggaccta      2040
     gacagtcatt taaagtctat aaaagaagta ttagatatat tagaaaggta tggcttaaaa      2100
     attaaaagga gtaagtgcga gttcatggta acagaagtga ggtatttagg gttcataata      2160
     gatcaaaatg gggttcgtgt agacccagag aaagtcaaat caatagcaac aatgccacac      2220
     ccaaataacg tgacagaatt aaaatctttc atcggtatgg taaacttcta ttcgaagttc      2280
     atacaagatt tgagtgcaca tttatcacct ttatatgccc ttttaaaaaa aggtaagcac      2340
     tggatgtggg gaaatgaaca aaatgctgct ttcctgaatg ttaaaaagtt tttgtgtagt      2400
     acaaaagcac tcgcacattt tgatatgtct ttggagtcgg tgttgactgt ggatgcgagc      2460
     gcgcgtggtc tgggtgccgt gttggcgcag cgcgggccag gatgtcagga gcgcgtcgtt      2520
     gcatacgctt cacgcgcact caccactcat gaattacact acagtcagat tcataaggaa      2580
     gcattggcga ttgttttcgc ggtggaaaaa ttccatcaat acttatatgg gagaaagttc      2640
     atactacgga ccgaccacaa acctctggtg agcattttcg ggcctaacat aggtatcccg      2700
     agcgcggcag ctagccgctt gcagcgctgg gctattaaac tatcagcata tgactttgaa      2760
     atcgagtacg ttaggacaga taaaaatgta gccgatgcac tttcacggtt aatcgagtct      2820
     caaaaaaatg acgtagcttc cgaggaaaca gacttacccg agcaaaccta cttacacttc      2880
     tcaacagaag ctctgttaat agattataat gttcttaaaa aacaaactag tagtgatcca      2940
     atcttaagtc gcgtattaag ttatttaagg gacggatggc ccttagacat agaaattaat      3000
     gaattaaaac catattataa taggaaaaac gaactttata ttgaattagg atgtataatg      3060
     tggggtcatc gtgtggttat accctcttca tgcagaaaca aaataataac ggagcttcat      3120
     gatccgcata tgggcatagt gaaaacaaaa tcgctagcac gtagttacgt ttggtggccg      3180
     ggaatcgacg aagcgctcga gacggaatgt cgcgcttgca ccgtgtgtgc tgccgtcgca      3240
     gacgcacctt ctacacacgc gccccgctcg tggccctggc cctcacgccc ctggtccagg      3300
     ttacacttag acttcttagg ccccataggt ggagtcactt acctagttgt agtggattca      3360
     tgctccaaat ggatagaggc aattaaaatg cagaggacaa cggcacaagc ggttatatcg      3420
     gtactgcggg acttgtggtc aaaattcggc ctgccaaagc aaacggtcag tgacaatgga      3480
     ccgcctttct cgagctctga ttttcagaag tttctgattc ataatggcat aaaacatatt      3540
     tattcagctc cctatcatcc cgcctctaat ggggccgctg aaaatgcagt taaaatttgt      3600
     aaacgtgcga ttaaaaaggc attaaaacag aatttaaacg tagatacagc tctgtgtaga      3660
     tttttattag cctacagaaa tacagaacat gcaactaccg gcgatagtcc agccaatata      3720
     ttacagggtc gaagtctccg tatgagatta gataatttaa aaccagaaag gcaatctcga      3780
     gttatcgcgc aacaagagcg gagcgagcaa aacgcagggg gtgtgcagcg acaactcgag      3840
     ccgggcacta aggtgtggta tcgggattat cgaggtctgg ataaatgggt acctgggacg      3900
     atcctcaagc aattaggtag tcgtgattac tgtgtacgat ctagttttgg aaccgagaat      3960
     cataggcacg tcgatcagct aaaattaagg gttacaaaaa atatagataa agttgatacc      4020
     tttgcgtcga ttcgtaaaaa tataagtccc gaactgatcg cgcaaaattt agacttaaga      4080
     acacaatcac gtaagttccg gctatcattt cccatgacaa gtggcgagga accagtggcg      4140
     gtggtcaacg attcggggaa gagtagttca ccaccaaaaa atagcacacc ggcacaggat      4200
     gctgtatcgc ctattcgtgg cagccctatg agacccgctg tgccgataga caagggagca      4260
     tgtaatactg gtggtaagag tatcaatgaa aatgtgacac ccaaacgtga acgtcctgta      4320
     agaatacgca agccaccagt tagatatgga ttcgaggaaa tagattaagt atatagttat      4380
     aacctctctt tgtttttttt tactttagtt tgttatgtac gcttagttaa gatatatata      4440
     tatatatatt aattgtgctt ataatgtgta gtaaataagg gtggaggtgt tatgtttgta      4500
     agtaagtatt cacttcagtg tgtcaataaa cggtgaacgc aacgtacgtg tctattattt      4560
     acta                                                                   4564
//
ID   MARP1     repbase; DNA; INV; 342 BP.
CC   MARP1 DNA
XX
AC   Z11862;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.brucei Marp1 repeat protein.
XX
KW   MARP-1 repeat; microtubule-associated protein MARP-1;
KW   repetitive sequence.
XX
OS   Trypanosoma brucei
CC   Trypanosoma brucei
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-342
RC   [1]  (bases 1 to 1370)
RA   Affolter M., Hemphill A., Roditi I., Mueller N., Seebeck T.;
RT   "The repetitive microtubule-associated proteins MARP-1 and MARP-2 of
RT   Trypanosoma brucei";
RL   Unpublished
XX
RN   [2]
RP   1-342
RC   [2]  (bases 1 to 1370)
RA   Hemphill A., Affolter M., Seebeck T.;
RT   "A novel microtubule-binding motif identified in a high molecular
RT   weight microtubuli-associated protein from Trypanosoma brucei";
RL   J. Cell Biol. 117, 0-0 (1992)
XX
RN   [3]
RP   1-342
RC   [3]  (bases 1 to 1370)
RA   Schneider A., Hemphill A., Wyler T., Seebeck T.;
RT   "large microtubule-associated protein of T. brucei has tandemly
RT   repeated, near-identical sequences";
RL   Science 241, 459-462 (1988)
XX
RN   [4]
RP   1-342
RC   [4]  (bases 1 to 1370)
RA   Seebeck T.;
RT   "Direct Submission";
RL   Submitted (23-MAR-1992) Seebeck T., University of Bern, Allgemeine
RL   Mikrobiologie, Baltzerstrasse 4, Bern, Switzerland, CH-3012
XX
DR   GENBANK; Z11862; 77.0.
CC   Positions    1029    1370  Accession No Z11862        GenBank (rel. 77.0)
XX
SQ   Sequence 342 BP; 103 A; 92 C; 87 G; 60 T; 0 other;
     gaagaagttg caaccgatat gcgccacgtg gatgagagcc acttcctgac cacgacacat        60
     gaggcataca aacccattga ccccagtgag tatcgtcaga agcgtaccgt tggggaagaa       120
     gttacaaccg atatgcgcca cgtggatgag agccacttcc tgaccacgac acatgaggca       180
     tacaaaccca ttgaccccag tgaatatcgt cagaagcgta ccgttgggga agaagttaca       240
     accgatatgc ggcacgtgga tgagagccac ttcctgacca cgacacatga ggcatacaaa       300
     cccattgacc ccagtgaata tcgtcagaag cgtaccgttg gg                          342
//
ID   MBOI      repbase; DNA; INV; 62 BP.
CC   MBOI DNA
XX
AC   M34369;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   B.malayi MboI repeat consensus sequence DNA.
XX
KW   MboI repetitive element.
XX
OS   Brugia malayi
CC   B.malayi (strain sub-periodic) DNA.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Spiruria;
OC   Spirurida; Spirurina; Filarioidea; Gnathostomatidae.
XX
RN   [1]
RP   1-62
RC   [1]  (bases 1 to 62)
RA   Natarajan S., Werner C., Cameron M., Rajan T.V.;
RT   "Isolation and characterization of a repetitive DNA element from the
RT   genome of the human filarial parasite, Brugia malayi";
RL   Mol. Biochem. Parasitol. 43, 39-50 (1990)
XX
DR   GENBANK; M34369; 77.0.
CC   Positions       1      62  Accession No M34369        GenBank (rel. 77.0)
XX
SQ   Sequence 62 BP; 24 A; 12 C; 4 G; 22 T; 0 other;
     ccatttctct acagatataa caatatcact agaagacatt ttgattaatt cattaactca        60
     ta                                                                       62
//
ID   MHSAT1    repbase; DNA; INV; 169 BP.
CC   MHSAT1 DNA
XX
AC   L07109;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Meloidogyne hapla satellite repeat.
XX
KW   Satellite repeat; repetitive element; MHSAT1.
XX
OS   Meloidogyne hapla
CC   Meloidogyne hapla (strain La Mole) juvenile DNA.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea;
OC   Diplogasteria; Tylenchida; Tylenchina; Tylenchoidea; Heteroderidae.
XX
RN   [1]
RP   1-169
RC   [1]  (bases 1 to 169)
RA   Piotte C., Castagnone-Sereno P., Bongiovanni M., Dalmasso A.,
RA   Abad P.;
RT   "Cloning and Characterization of two satellite DNAs in the low
RT   C-value genome of the nematode Meloidogyne spp";
RL   Unpublished (1992)
XX
DR   GENBANK; L07109; 77.0.
CC   Positions       1     169  Accession No L07109        GenBank (rel. 77.0)
XX
SQ   Sequence 169 BP; 58 A; 28 C; 26 G; 57 T; 0 other;
     cttggaatta gaaataattg tttatatgag ttccttgtaa agcaacctct agatgccacc        60
     agatataaaa aattgttgca cagtcaaaac tggaaatggt cttcattatt gaatatctta       120
     cagaatgctg tatctatcct gaaaaaatcc tgtgtcgaac ttaattttc                   169
//
ID   MISAT1    repbase; DNA; INV; 296 BP.
CC   MISAT1 DNA
XX
AC   L07110;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Meloidogyne incognita satellite repeat.
XX
KW   Satellite repeat; repetitive sequence; MISAT1.
XX
OS   Meloidogyne hapla
CC   Meloidogyne hapla (strain Taiwan) juvenile DNA.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea;
OC   Diplogasteria; Tylenchida; Tylenchina; Tylenchoidea; Heteroderidae.
XX
RN   [1]
RP   1-296
RC   [1]  (bases 1 to 296)
RA   Piotte C., Castagnone-Sereno P., Bongiovanni M., Dalmasso A.,
RA   Abad P.;
RT   "Cloning and Characterization of two satellite DNAs in the low
RT   C-value genome of the nematode Meloidogyne spp";
RL   Unpublished (1992)
XX
DR   GENBANK; L07110; 77.0.
CC   Positions       1     296  Accession No L07110        GenBank (rel. 77.0)
XX
SQ   Sequence 296 BP; 121 A; 34 C; 32 G; 109 T; 0 other;
     cttggtttaa ttacccaagt ttaaggtatg taaatcatta ctacttggga aaaattttgg        60
     aattgtattt cgaaagaaat actcaaaatt aaatcaataa ttaaaagttt ttaaaaaaaa       120
     cttgatacaa aaatttaaaa ataaactttt tactaaaagt attttataga ttatagaagg       180
     agaaaagaag cagagaatgt acactatctc tcattaaatg aagaaaaatt aaattttatt       240
     ccccatcaat attttcctaa ttttatggac attttgtcct tttatttttc caattc           296
//
ID   BRP1_NV   repbase; DNA; INV; 214 BP.
CC   BRP1_NV DNA
XX
AC   X64093;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   N.vitripennis repetitive DNA from B chromosome.
XX
KW   Repetitive DNA; satellite DNA.
XX
OS   Nasonia vitripennis
CC   Nasonia vitripennis
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Pteromalidae.
XX
RN   [1]
RP   1-214
RC   [1]  (bases 1 to 214)
RA   Eickbaum D.C.;
RT   "Direct Submission";
RL   Submitted (27-DEC-1991) D.C. Eickbaum, University of Rochester,
RL   Dept. of Biology, Hutchison Hall 334, Rochester, NY 14627, USA
XX
RN   [2]
RP   1-214
RC   [2]  (bases 1 to 214)
RA   Eickbush D.G., Eickbush T.H., Werren J.H.;
RT   "Molecular characterization of repetitive DNA sequences from a B
RT   chromosome.";
RL   Chromosoma 101, 575-583 (1992)
XX
DR   GENBANK; X64093; 77.0.
CC   Positions       1     214  Accession No X64093        GenBank (rel. 77.0)
XX
SQ   Sequence 214 BP; 80 A; 40 C; 41 G; 53 T; 0 other;
     ggcagaagaa gagggtcaaa agtctagact ttggcttact ggcttcaatc acgccagttg        60
     taactacaat ttaatacact agactccaag atatatacaa gtagcttata taaaaataat       120
     acacgtaaga tcctcgcaga gggaagatga cgctcctaaa actcaaaatt attagggtcc       180
     acgaaaaaaa gtcggccata gtaaggcatt tttt                                   214
//
ID   BRP2_NV   repbase; DNA; INV; 110 BP.
CC   BRP2_NV DNA
XX
AC   X64090;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   N.vitripennis repetitive DNA from B chromosome.
XX
KW   Repetitive DNA; satellite DNA.
XX
OS   Nasonia vitripennis
CC   Nasonia vitripennis
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Pteromalidae.
XX
RN   [1]
RP   1-110
RC   [1]  (bases 1 to 110)
RA   Eickbaum D.C.;
RT   "Direct Submission";
RL   Submitted (27-DEC-1991) D.C. Eickbaum, University of Rochester,
RL   Dept. of Biology, Hutchison Hall 334, Rochester, NY 14627, USA
XX
RN   [2]
RP   1-110
RC   [2]  (bases 1 to 110)
RA   Eickbush D.G., Eickbush T.H., Werren J.H.;
RT   "Molecular characterization of repetitive DNA sequences from a B
RT   chromosome.";
RL   Chromosoma 101, 575-583 (1992)
XX
DR   GENBANK; X64090; 77.0.
CC   Positions       1     110  Accession No X64090        GenBank (rel. 77.0)
XX
SQ   Sequence 110 BP; 23 A; 19 C; 29 G; 39 T; 0 other;
     ctgggtttaa gcacttggtt tttagagttt aacctcgctt tgctcgcctt acgccgatgt        60
     gtcgaagagt tttaataaat aatttactga tctcgggggg catggtgtag                  110
//
ID   NVBRP3    repbase; DNA; INV; 94 BP.
CC   NVBRP3 DNA
XX
AC   X64091;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   N.vitripennis repetitive DNA from B chromosome.
XX
KW   Repetitive DNA; satellite DNA.
XX
OS   Nasonia vitripennis
CC   Nasonia vitripennis
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Pteromalidae.
XX
RN   [1]
RP   1-94
RC   [1]  (bases 1 to 94)
RA   Eickbaum D.C.;
RT   "Direct Submission";
RL   Submitted (27-DEC-1991) D.C. Eickbaum, University of Rochester,
RL   Dept. of Biology, Hutchison Hall 334, Rochester, NY 14627, USA
XX
RN   [2]
RP   1-94
RC   [2]  (bases 1 to 94)
RA   Eickbush D.G., Eickbush T.H., Werren J.H.;
RT   "Molecular characterization of repetitive DNA sequences from a B
RT   chromosome.";
RL   Chromosoma 101, 575-583 (1992)
XX
DR   GENBANK; X64091; 77.0.
CC   Positions       1      94  Accession No X64091        GenBank (rel. 77.0)
XX
SQ   Sequence 94 BP; 35 A; 20 C; 19 G; 20 T; 0 other;
     tcgagtttga atcgtcagca tatcggagga aggcgaacga gggcgagaat ttaatttaaa        60
     acaataaacc ttaaacccac ctaccctata gaca                                    94
//
ID   NVBRP4    repbase; DNA; INV; 183 BP.
CC   NVBRP4 DNA
XX
AC   X64096;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   N.vitripennis repetitive DNA from B chromosome.
XX
KW   Repetitive DNA; satellite DNA.
XX
OS   Nasonia vitripennis
CC   Nasonia vitripennis
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Pteromalidae.
XX
RN   [1]
RP   1-183
RC   [1]  (bases 1 to 183)
RA   Eickbaum D.C.;
RT   "Direct Submission";
RL   Submitted (27-DEC-1991) D.C. Eickbaum, University of Rochester,
RL   Dept. of Biology, Hutchison Hall 334, Rochester, NY 14627, USA
XX
RN   [2]
RP   1-183
RC   [2]  (bases 1 to 183)
RA   Eickbush D.G., Eickbush T.H., Werren J.H.;
RT   "Molecular characterization of repetitive DNA sequences from a B
RT   chromosome.";
RL   Chromosoma 101, 575-583 (1992)
XX
DR   GENBANK; X64096; 77.0.
CC   Positions       1     183  Accession No X64096        GenBank (rel. 77.0)
XX
SQ   Sequence 183 BP; 70 A; 25 C; 36 G; 52 T; 0 other;
     gtcggggtaa tataatcaaa agtctcgact tatgattgga tattaaaagt atatcataca        60
     tcgatatgac aaataatttg catgtctaac gatattacgt cttaaatgaa gaagcagtaa       120
     attttataaa acaagatggg tgacgcttat aacacgagca gcagttgaga aagcaatgcc       180
     gtt                                                                     183
//
ID   NVBRP5    repbase; DNA; INV; 175 BP.
CC   NVBRP5 DNA
XX
AC   X64092;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   N.vitripennis repetitive DNA from B chromosome.
XX
KW   Repetitive DNA; satellite DNA.
XX
OS   Nasonia vitripennis
CC   Nasonia vitripennis
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Pteromalidae.
XX
RN   [1]
RP   1-175
RC   [1]  (bases 1 to 175)
RA   Eickbaum D.C.;
RT   "Direct Submission";
RL   Submitted (27-DEC-1991) D.C. Eickbaum, University of Rochester,
RL   Dept. of Biology, Hutchison Hall 334, Rochester, NY 14627, USA
XX
RN   [2]
RP   1-175
RC   [2]  (bases 1 to 175)
RA   Eickbush D.G., Eickbush T.H., Werren J.H.;
RT   "Molecular characterization of repetitive DNA sequences from a B
RT   chromosome.";
RL   Chromosoma 101, 575-583 (1992)
XX
DR   GENBANK; X64092; 77.0.
CC   Positions       1     175  Accession No X64092        GenBank (rel. 77.0)
XX
SQ   Sequence 175 BP; 51 A; 30 C; 38 G; 56 T; 0 other;
     taagttctcg gcttacccac ctattatccc ttctattgcg atggtttatt tctactagta        60
     gtataagaaa taattacagc aagtttggtt gaaatcgaag gttgggaatc tggacaactg       120
     ggcgctagta gttgtcaaga aggaatctga atcacgaata tagatctttg tcgac            175
//
ID   OARP1     repbase; DNA; INV; 218 BP.
CC   OARP1 DNA
XX
AC   M23276;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Onchocerca armillata repetitive DNA sequence, clone pOA5.
XX
KW   Repetitive element.
XX
OS   Onchocerca armillata
CC   Onchocerca armillata DNA.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Spiruria;
OC   Spirurida; Spirurina; Filarioidea; Filariidae.
XX
RN   [1]
RP   1-218
RC   [1]  (bases 1 to 218)
RA   Murray K.A., Post R.J., Crampton J.M., McCall P.J., Kouyate B.;
RT   "Cloning and characterization of a species-specific repetitive DNA
RT   sequence from Onchocerca armillata";
RL   Mol. Biochem. Parasitol. 30, 209-216 (1988)
RX   MEDLINE; 89040017.
XX
DR   GENBANK; M23276; 89.0.
CC   Positions       1     218  Accession No M23276        GenBank (rel. 89.0)
XX
SQ   Sequence 218 BP; 85 A; 22 C; 26 G; 85 T; 0 other;
     acataaagta tatttttttt tagagctgaa atataattta cgaacatgtt tcgtattata        60
     taattcaaag gaattttatt aaaattgaat aattatgctc attcactgct ataatatgtg       120
     atctgcatgt gctattccaa aaaaacataa agtataattt ttttttagag ctgaaatata       180
     atttcgaaca tgtttcgaat aatataattc aaaggaat                               218
//
ID   OK        repbase; DNA; INV; 465 BP.
CC   OK DNA
XX
AC   D32083;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   SINE element.
XX
KW   Repetitive element; SINE.
XX
OS   Octopus vulgaris
CC   Octopus vulgaris DNA, clones OK-2 and OK-2*.
OC   Eukaryota; Animalia; Eumetazoa; Mollusca; Cephalopoda; Coleoidea;
OC   Octopoda; Incirrata; Octopodidae.
XX
RN   [1]
RP   1-465
RC   [1]  (bases 1 to 931)
RA   Ohshima K., Okada N.;
RT   "Generality of the tRNA origin of short interspersed repetitive
RT   elements (SINEs). Characterization of three different tRNA-derived
RT   retroposons in the octopus";
RL   J. Mol. Biol. 243 (1), 25-37 (1994)
RX   MEDLINE; 95018248.
XX
DR   GENBANK; D32083; 89.0.
CC   Positions     267     731  Accession No D32083        GenBank (rel. 89.0)
XX
SQ   Sequence 465 BP; 120 A; 97 C; 112 G; 136 T; 0 other;
     atatatatat aggcgcagga gtggctgtgt ggtaagtagc ttgcttacca accacatggt        60
     tccgggttca gtcccactgc gtgcaacttt gggcaagtgc cttctactat agcctcaggc       120
     tgaccaaagc cttgtgagtg gatttaatca tcatcatcat cgtcgtttaa cgtccgttct       180
     ccatgctagc atgggttgct agacggaaac tgaaagaagc ctgtcgtgta tatgtatata       240
     tatatatatg tgtgtgtgtt tgtgtgtctg tgtttgtccc ccccaaaatc gcttgacaac       300
     cgatgctggt gtgttcatgt cccccgtaac ttagcggttc agcaaaaggg accgatagaa       360
     taagtactag gcttacaaag aataagtcct ggtgtcgatt tgttcgacta atggcggtgc       420
     tccagtatgg ccacagtcaa atgactgaaa caagtaaaaa tatat                       465
//
ID   OR1       repbase; DNA; INV; 1092 BP.
CC   OR1 DNA
XX
AC   D32089;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   SINE element.
XX
KW   Repetitive element; SINE.
XX
OS   Octopus vulgaris
CC   Octopus vulgaris DNA, clone OR1-13.
OC   Eukaryota; Animalia; Eumetazoa; Mollusca; Cephalopoda; Coleoidea;
OC   Octopoda; Incirrata; Octopodidae.
XX
RN   [1]
RP   1-1092
RC   [1]  (bases 1 to 2041)
RA   Ohshima K., Okada N.;
RT   "Generality of the tRNA origin of short interspersed repetitive
RT   elements (SINEs). Characterization of three different tRNA-derived
RT   retroposons in the octopus";
RL   J. Mol. Biol. 243 (1), 25-37 (1994)
RX   MEDLINE; 95018248.
XX
DR   GENBANK; D32089; 89.0.
CC   Positions     510    1601  Accession No D32089        GenBank (rel. 89.0)
XX
SQ   Sequence 1092 BP; 245 A; 247 C; 254 G; 346 T; 0 other;
     cgtggaggcg caatggccca gtggttaggg cagcggactc gcggtcatag gatcgtggtt        60
     tcgattttca gaccgggcgt tgtgagtgtt tattgagcga aaacacctaa aagctccatg       120
     aggctccggc agggaatggt ggtgatccct gctgtattct ttcaccacaa ctttctctca       180
     ctcttacttc ctgtttctat tgtacctgta tttcaaaggg ctggccttgt cactctcagt       240
     gtcacgctga acatccccaa gaactacgtt aagggtacac gtgtctgtgg agtgctcagc       300
     cacttacacg ttaatttcac gagcaggctg tcccgttgat tggatcaacc ggaaccctcg       360
     tggtcgtaac cgacggagtg cttccatttt atatattcct atggttcatc aggaaatatg       420
     tttaccatcc ttctgagatt ttgtatatat ggatgctatt gtttgttcta atttattcaa       480
     attgtaagga aaatttagaa tctaaatcta cttctgggtt atataaagtc agtcgtttga       540
     agttatcatt ttattctgat acaaatgtta tgtgtttaag agctcctctc ttaacgtcag       600
     acctcccctt tatactgatg ctaattcaga tttcatagtt gcttatgatt gtactctttg       660
     gtgtggagca tcacatatgg tgtctaaaca gtggtagtgt tgaagcgtgg aggcgcaata       720
     gtccagtggt tagggcagcg gactcgcggt cataggatcg cggtttcgat tcccaaaccg       780
     ggcgttgtta gtgtttattg agcgaaaaca cctaaaagct ccatgaggct ccggcaagag       840
     gatggtggtg atccctgctg tactctttca ccacaacttt ctctcactct tacttcctgt       900
     ttctgtggta cctgtatttc aaagggccgg ccttgtcact ctctgtgtca cgttgaattt       960
     ccccccgaaa tacattaagg gtacacgtgt ctgtggagtg ctcagccact tatacgttaa      1020
     tttcacgagc aggttgttcc gttgattcgg atcaaccgga accctcgtcg ccgtaaccga      1080
     cggactgttt cc                                                          1092
//
ID   OR2       repbase; DNA; INV; 484 BP.
CC   OR2 DNA
XX
AC   D32092;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   SINE element.
XX
KW   Repetitive element; SINE.
XX
OS   Octopus vulgaris
CC   Octopus vulgaris DNA, clone OR2-6.
OC   Eukaryota; Animalia; Eumetazoa; Mollusca; Cephalopoda; Coleoidea;
OC   Octopoda; Incirrata; Octopodidae.
XX
RN   [1]
RP   1-484
RC   [1]  (bases 1 to 584)
RA   Ohshima K., Okada N.;
RT   "Generality of the tRNA origin of short interspersed repetitive
RT   elements (SINEs). Characterization of three different tRNA-derived
RT   retroposons in the octopus";
RL   J. Mol. Biol. 243 (1), 25-37 (1994)
RX   MEDLINE; 95018248.
XX
DR   GENBANK; D32092; 89.0.
CC   Positions      51     534  Accession No D32092        GenBank (rel. 89.0)
XX
SQ   Sequence 484 BP; 119 A; 109 C; 125 G; 131 T; 0 other;
     ataatcgtga gattgtggtt tcgattcctg gaccgggcga cgtgttgtgt tcttgagcaa        60
     aacacttcat tttcacattg ctccagttca ctcagctgac aaaaatgatt aacgctgcga       120
     tgactggcgt cccgtccagc tggggaacac atacgccatt gaaactcgga gaccgggccc       180
     atgaggctgg ctaggcttta aaagggcgca tttatttgta gaggcgcatg gcttagtggt       240
     tagggtgtca gcatcatgat cgtaaaattg tggtttcaat tcctggaccg ggcgacacgt       300
     tgtgttcttg aacaaaacac ttcatttcac gttgatccag ttcactcagc tggcaaaaat       360
     gggtaacgct gcgatgactg acgtcccgtc cagctgggga acacatacgc cattgaaacc       420
     gggaaaccgg gcccatgagc ctggctaggc tttaaaaggg cgcatttatt atttatttat       480
     ttta                                                                    484
//
ID   OVRP1     repbase; DNA; INV; 297 BP.
CC   OVRP1 DNA
XX
AC   M18644;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   O.volvulus DNA repeat.
XX
KW   Repetitive sequence; tandem repeat.
XX
OS   Onchocerca volvulus
CC   O.volvulus DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Similiidae.
XX
RN   [1]
RP   1-297
RC   [1]  (bases 1 to 297)
RA   Shah J.S., Karam M., Piessens W.F., Wirth D.F.;
RT   "Characterization of an onchocerca-specific DNA clone from
RT   Onchocerca volvulus";
RL   Am. J. Trop. Med. Hyg. 37, 376-384 (1987)
XX
DR   GENBANK; M18644; 77.0.
CC   Positions       1     297  Accession No M18644        GenBank (rel. 77.0)
XX
SQ   Sequence 297 BP; 103 A; 52 C; 49 G; 93 T; 0 other;
     gatctctaat atcaagaaac gggtacatac cctcaaattg agtgctaaaa aaaatgctcg        60
     actatatttt ggtgaatttc aaatttatat cgcgattttt ccggcgaaca acgcagtttg       120
     caaaattaat taataactgg tgacatatga cccctagttt cacgaaaggg gtacgtgctt       180
     tcaaattgag tcctaaaaaa aatattcgac tatattttgg tgaattttca catttatatc       240
     gcgatatatc cggcgaacaa cgcagtttgc aaaattaatt aataactggt accatat          297
//
ID   P126      repbase; DNA; INV; 1840 BP.
CC   P126 DNA
XX
AC   M96642;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.tetraurelia P126 repetitive element.
XX
KW   P126 repeat element; repetitive sequence.
XX
OS   Paramecium tetraurelia
CC   Paramecium tetraurelia (strain stock 51) DNA.
OC   Eukaryota; Animalia; Protozoa; Ciliophora; Oligohymenophora;
OC   Hymenostomata; Hymenostomatida; Tetrahymenina; Glaucomidae.
XX
RN   [1]
RP   1-1840
RC   [1]  (bases 1 to 2897)
RA   Forney J.D., Rodkey K.;
RT   "A repetitive DNA sequence in Paramecium macronuclei is related to
RT   the beta subunit of G proteins";
RL   Nucleic Acids Res. 20, 5397-5402 (1992)
XX
DR   GENBANK; M96642; 77.0.
CC   Positions     781    2620  Accession No M96642        GenBank (rel. 77.0)
XX
SQ   Sequence 1840 BP; 568 A; 267 C; 349 G; 656 T; 0 other;
     tttgtttctc tcctgatggt actttattag cttctggtag ttgtgataat tctatccgtt        60
     tatgggatgt ttagacagga aaataaaaag tgaaaataga tggtcaccgc gattatgtaa       120
     attcagtatg tttctctcct aatggtacta cattagcatc cggtagtgat gattaaacta       180
     ttcgtttatg ggatgttaag acaggaaaat aaaaagccat ttttattggt cattcagatt       240
     ttgtgtattc agtcaatttc tctcctgaca gtactatatt agcatctggt agtgtagata       300
     aatctatccg tttatgggat gttaagacag gataataaaa agccaaatta gatggccatt       360
     tagattatgt taattcagtc aatttctctt gtgatggtac tacattagca tctggtagtt       420
     gggataattc tatcaggtta tgggatgtta agacaggaaa ataaaaagcc atttttattg       480
     gtcattcagg ttgtgtgtat tcagtcaatt tctctcctga aagtactata ttagcatctg       540
     gtagtgaaga taaatctatc cgtttatggg atgttaagac aggataataa aaagccaaat       600
     taattggtca ctcaggttat gttaattcag tcaatttctc tcctgatggt tctacattag       660
     catctagtag ttcagataac tctatccgtt tatgggatgt taagtcagga taataaaaag       720
     ccaaattcga tggtcattta tcaagtgttt tgtcagtcaa tttctctcct gatcatacta       780
     cattagcatc tggtagtgta gataaatgta tccgtttatg ggatgttaag acaggatatt       840
     aaaaagccaa agtagatggt catttatcaa ctgttgtgtc agtcaatttc tctcctgatg       900
     gtactacatt agcatctggt agttcagata attctatccg tttatgggat accaagacgg       960
     gataataaaa agtcaaattg gatggtcatt caggttacgt taattcagtc aatttctcac      1020
     ttgatggtac tatattagca tctggtagtt ttgataattc tattcgttta tgggatgtta      1080
     agacaggata ataaaaagcc aaattagatg gtcattcaga aactgttact tcagtcaatt      1140
     tctctcctga cagtactata ttagcatctg gtagtcatga taactctatc tgtatatggg      1200
     atgttaagac aggataataa aaagccaaat tggatggtca ttcttaaaca gtttattcag      1260
     tcaatttctc tcctgatggt actttattag cttctggtag ttgggataag ttaatccttt      1320
     tatgggatgt taagacagga taataaaaag tcaaattaga tggtcattct taaacagttt      1380
     attcagtcaa tttctctcct aatggtactt tattagcttc tggtagtggg gataatttaa      1440
     ccattttatg ggatgttaag actggataat aaaaagctaa attagatggt cattcatcaa      1500
     cagtttattc agtcaatttc tcacctgatg gtacgacatt agcatctggt agtgaagatt      1560
     agtctatctg tttatgggat gttaagacag gataataaaa agccaaatta attggtcatt      1620
     caaatggaat tctttctgtc aatttctctc gagacaatac tacattagca tctggtagtt      1680
     tcgataattc tattcgttta tgggatgtta agacaagata gttaaaaacc aaattagatg      1740
     atcatcctgc cacagttaat tcagtcaatt tctctcctga tggtactaaa ttagtatctg      1800
     gtagtaatga taactctgtc catttatggg atgttaaaac                            1840
//
ID   PAO       repbase; DNA; INV; 4791 BP.
CC   PAO DNA
XX
AC   L09635;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Bombyx mori retrotransposable element Pao.
XX
KW   Long terminal repeat (LTR); retrotransposable element;
KW   Repetitive element; reverse transcriptase.
XX
OS   Bombyx mori
CC   Bombyx mori (strain 703) (library: Charon 35 of B. Hibner, W. Burke
CC   and T. Eickbush) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata;
OC   Bombycoidea; Bombycidae.
XX
RN   [1]
RP   1-4791
RC   [1]  (bases 1 to 4791)
RA   Xiong Y., Burke W.D., Eickbush T.H.;
RT   "Pao,a retrotransposable element from Bombyx mori with a highly
RT   divergent reverse transcriptase domain and unusual long terminal
RT   repeat";
RL   Unpublished (1993)
XX
DR   GENBANK; L09635; 77.0.
CC   Positions       1    4791  Accession No L09635        GenBank (rel. 77.0)
XX
SQ   Sequence 4791 BP; 1749 A; 1142 C; 1039 G; 861 T; 0 other;
     tgtgcaggac gaaatagggt tttttatagt ttaagaaaca aatagattta atttaaccgt        60
     taataagtga ttacgtaata aatgtataat cttaagttat tttatagtca atatgttagt       120
     gtatcagatc agagaatgta aatagaccaa taggaacgat ttgtggagcg ctttcactac       180
     ggtaacatac agatcaaggg acccccgaaa gtggcgcgtc gatagccggt cgcgagatgg       240
     ggtactgaaa taaatataaa aggatggcca tttataggca aaaacagttc tcagtggatc       300
     aagacagaaa cagttcccag cgaatcttcg acaaagaaac atcagcaaga tagaaacagt       360
     tctcagcaga tcatcaagac agaaacagtt cccagtgaat cttcgacaaa gaaacatcag       420
     caagacagaa acagttacca gcagttctcc gatagtacag ttaccaccag tgaatcagct       480
     accagtgaac cagacagtta cctgtgaaac ctcgctacag aagccgaaac ccatcgaaag       540
     aaacagccgt cttctaccag cgcacaaaca gacagcaaaa accattatta cacgactcgg       600
     aaacagccat acagaccggg tcgtgtacat ttcatggtcc attcgagccg gatagaggac       660
     acatttcatt attctttcga gcccggtaga ggatacgttt tgaaaaggaa actggaacaa       720
     tgccgataac gcggtcaaca ggaagaggac ggatcgaaac tgaacagtcg ccgccctcag       780
     aaaccacagc tacaacacag agcatgtgga cagaaacaac cgcgaatacc gtcatgagtc       840
     tggtagcccc cacaacagaa tcatcgtgcg caacagccaa cacggaagcc acgacgaaac       900
     tcgcagagaa acctgggaac tcaaaaacag aggccgtcaa acagtatata gccaaacaga       960
     atgacgtgcc aacaaaacag cgcgccggta cagtcaaaag tgaccggtcg cgaaacagaa      1020
     aagaacagaa gatagccaaa gctagagaag agctcgcccg cctacaggtg gagttagcag      1080
     ccgcccgatt ggccacgctc gaagctggat ctgatgacga aaacagcgaa tcagaataca      1140
     gtaagtcaga actcgacgaa agagtgggca cgtggttgga aacccaaccc acaaaaacgg      1200
     aaaatcacga ccgacataag gaaacaccgg cgggagcctg cgacaaacaa gacttctcag      1260
     atctaaccgc agcaataaca ctcgccgtca aagccgcccg cgaaccaaga tacacagaat      1320
     tgccattctt taatggaaat caccaagatt ggctatcctt tcgtgcagcc tatcacgaga      1380
     cgatgaattc atttacaaaa acagaaaata taaacagact cagaaggaac ctgaaaggaa      1440
     gggcaaagga agccgttgac ggattactta taacgaacgc tgatccgtcc gacgtcataa      1500
     gaagtctaga agcgcgattc ggaagaccgg aaacaatagc cataacggag ttagacacgc      1560
     tacgagcgct gccaagacta acagaaacac caagagacat ttgtatattc tccagtaagg      1620
     tgaccaacgc cgtagctacg cttcgtgcat taaattgcac acattattta tataatccgg      1680
     aaactaccaa aacaatgtta gaaaaactca caccaacact acgttaccga tactacgact      1740
     tcaccgcggt acaaccgaag gaggatccgg atctgattaa atttgaaaaa ttcatgaaaa      1800
     gagaagccga actgtgcagc ccttatgcac agcccgaaca ggcggggcac tactcgcagc      1860
     ccgcacaaca caacagacgc acacagaacg tgcacatagt cagtgagaag ccatcacgag      1920
     ctaaatgtcc ggtatgtagc aacactgaac acaccacaac agactgctac atattcaaga      1980
     aggcagactc aaacacaaga tgggacatcg ctaagaataa acacctgtgt ttccgatgtc      2040
     tacagtataa gaataaaacc cacaactgta aaccgaagac gtgtggcatt aatgattgca      2100
     aatatactca caacaagatg ctacacttcg acagaaaaat tgaaaaaaca gacaacagtg      2160
     acaaggaaac aacagagaac attaattccg cttggaccgg aaaacagaaa cagtcctatt      2220
     tgaaaataat cccagtccaa gtacaaggac cgataggcac ggttgataca tacgcgctgc      2280
     tcgacgatgg atcaacggta acactgatag acgaaatcat ctgcaagaag actggaacaa      2340
     caggaccaat cgatccgtta cacatacagg cgattaacaa cataaaatca acggaaacaa      2400
     ggtcaagaag agtcaacctc acgctcagag gcctcaacag tcgaaaagaa ataatacaag      2460
     cgagaacagt taacgaccta caagtaacag cacaaaaaat accaaaggaa cagatagacg      2520
     agtattcgca cctacaagac atcagtgaca tcatcacgta cgagaacgcg aaacctggaa      2580
     tcctgattgg ccaagacaaa aactacactg gcacatgtta ctagcttcga aagttagacg      2640
     aggcaacagg aatcagccaa tagcgtcact gacacctcta ggctgggtat tgcatggagg      2700
     tcgcactcgt accttaagcc accacattaa atcatgctag cgaaacccag gaagatgata      2760
     aaatagaaaa tctggtaaaa cagtatttcg ctatggatgc gctgtgcatc acaccaagaa      2820
     gaccaaaaac agacccagag gaacaggcgc ttcgcatcct caacagcaat acagtccaca      2880
     caacagatgg aagatacgaa actgctctgc tctggaaaac agataatgtc agtctaccag      2940
     acaactacaa taactcgtta aagcgactga taaatataga aaacaaactc gatcataatc      3000
     cggaactgaa acagaaatac acagaacaga tggaagcact cgttgcgaaa ggctacgccg      3060
     agcccgctcc aaaaacaaaa acagagaaca gaacgtggta tctacctcac ttcgccgtcg      3120
     tgaacccccc gaagccggaa aaactccgag tcgtccacga cgccgccgcc agaacaagag      3180
     gggtagcttt aaatgatatg ctgcttaagg gaccgaacct actccaatca ctgccaggag      3240
     tgataatgcg attcagacag cataatataa cagcaacagc agacatcaaa gagatgttca      3300
     tacaagtaaa attgagacct gaagacaaag acgcgctccg ttatctctgg cgcaaagatc      3360
     agcgagataa caagccccca gaagaaaaca gaatgacctc gttgatcttc ggggcgtcaa      3420
     gttctccttc cacagcaata tatgtaaaga acttgaacgc ccagaaacat gaagccacgc      3480
     acccggaggc ggcagccaca atacagaaca gacattacgt agacgactac ttggacattt      3540
     ttaaaggttt aaaagatgca gtactcgtaa caacagactt tcgtcgaaaa cacgaaagaa      3600
     agccgacctc gaagaccttc tggatcgaca gtgagatagt gttaagatgg acaagaacgg      3660
     aatcacgctc gtacaaacca tacgtcgccc aacgcctgac agctatagaa gacagttcaa      3720
     caataaacga gaggcgatgg ttacccacga agcacaacgt agccgacgac gtgacccgac      3780
     acgtcccaat gtcgtaccag aatgaacata gatggttcag atggacagaa ttcctacgcc      3840
     aacgacagaa ctcctggccg acggaatcgg cgtcagaaac tacagaaccg atgggtgaag      3900
     taaacatagc agctgcagta ccggcgggag cttcatggcc gaggcgtcgc catgaaaagt      3960
     ggaagtgcca gccacgaaat acacgcatgc gagggaaaag tgatagcgac atatccaggt      4020
     cccgacaacg tggggcgcat cgtagacatc agaaccaagg gtggagttct acggagacca      4080
     gtacgaaaac tactgatcct gcccatcgaa gaagaccatc ctgcaccgag aagaatgcga      4140
     ctgactcgca cggcgggagt aatgtgcagg acgaaatagg gttttttata gtttaagaaa      4200
     caaatagatt taatttaacc gttaataagt gattacgtaa taaatgtata atcttaagtt      4260
     attttatagt caatatgtta gtgtatcaga tcagagaatg taaatagacc aataggaacg      4320
     atttgtggag cgctttcact acggtaacat acagatcaag ggacccccga aagtggcgcg      4380
     tcgatagccg gtcgcgagat ggggtactga aataaatata aaaggatggc catttatagg      4440
     caaaaacagt tctcagtgga tcaagacaga aacagttccc agcgaatctt cgacaaagaa      4500
     acatcagcaa gatagaaaca gttctcagca gatcatcaag acagaaacag ttcccagtga      4560
     atcttcgaca aagaaacatc agcaagacag aaacagttac cagcagttct ccgatagtac      4620
     agttaccacc agtgaatcag ctaccagtga accagacagt tacctgtgaa acctcgctac      4680
     agaagccgaa acccatcgaa agaaacagcc gtcttctacc agcgcacaaa cagacagcaa      4740
     aaaccattat tacacgactc ggaaacagcc atacagaccg ggtcgtgtac a               4791
//
ID   PAT       repbase; DNA; INV; 5514 BP.
CC   PAT DNA
XX
AC   X60774;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.redivivus PAT retroposon.
XX
KW   Repetitive element; PAT retroposon.
XX
OS   Panagrellus redivivus
CC   Panagrellus redivivus
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditia;
OC   Rhabditida; Rhabditina; Rhabditoidea; Cephalobidae.
XX
RN   [1]
RP   1-5514
RC   [1]  (bases 1 to 5514)
RA   de Chastonay Y.;
RT   "Direct Submission";
RL   Submitted (04-JUL-1991) Y. De Chastonay, Inst of Zoology, Univ of
RL   Fribourg, Perolles, 1700 Fribourg, SWITZERLAND
XX
RN   [2]
RP   1-5514
RC   [2]  (bases 1 to 5514)
RA   de Chastonay Y., Felder H., Link C., Aeby P., Tobler H.,
RA   Mueller F.;
RT   "Unusual features of the retroid element PAT from the nematode
RT   Panagrellus redivivus";
RL   Nucleic Acids Res. 20, 1623-1628 (1992)
XX
DR   GENBANK; X60774; 77.0.
CC   Positions    3890    4194  Accession No X60774        GenBank (rel. 77.0)
XX
SQ   Sequence 5514 BP; 1448 A; 1419 C; 1515 G; 1132 T; 0 other;
     aacggcaggt tttgacggac gcttccctcg ttgggagcga aggtgctgca cgcctccgag        60
     cgcccaaggc gtcctggagc tgaaagtcct gctgcagtcg gtcgaggaag caggtgaaac       120
     ccggctagtc gtcattctag cccgggtttt taggtacgga gtggttgtcc cactcagctc       180
     ttaattttcc attgttttcc ccctttttcc ccctaatccc acgtcttatc gtcccagtac       240
     cccaggacgc taatagctag ctgcaaggac tatcgagaga ccgagtccga cccaagtttg       300
     cctcgaccat agtcgggagg tgtacgaaat cggttggaaa accccagagt ttctctgaga       360
     ccgattttat atataatttc ctgccccacc agtcccccat gtacccccgc aggagcaacc       420
     ccagacaccg tctcggtcag tacccattca aaagagtcct agcgatctcg ctgacttcaa       480
     ttctcggaag tggcggagct cttttgccag ttttatatat aattctaccc gaaagtgcat       540
     cagccccctt cccagtccca acccaggccg ctacagggca tattcttccc cctgtcggtc       600
     aaggctatcg tttggccgaa gaaaagccga ggaacctgtc cccatttcta ttgatcctgt       660
     atatataatc ccgccgtcgc accgcagcat ccaaacccat cccaaccccc atttacccct       720
     gtcggtgcga cctgtcttga ggagaagtcc tttccacagt tggtggacga gaaactgagg       780
     acgtgggaaa cgagtatacc ccgatcaagg gaagccccaa gccagaagtc ggtctgaggt       840
     cacggtgaat tcccgcatct ctctgcgtgt cgtggcggag gaagagtgac gagtggctat       900
     atagcccggc gtggccgatt ggcctgtagt aggcaggtat agacctggcc gaagagtgtt       960
     tctaccctcg tgacgtgtcc ccaaagggta aagattgtgc gtgtagctta tataagcagc      1020
     tcgtgaggag cgtactgtac aagagtactg acagttggtt ggtgttagag gtaaccagcc      1080
     aagatggaga agatatccga ggtcttcgag aaactgccca aggaggtctc tgctgccatc      1140
     caggagttat cgcccgatgc gatcagggag gtgatcggtg gactcgtcga ccccgagagg      1200
     gctcaagcct acctgaaggc agaatccgag aagctcaagc aggcggcgaa ggaagctgcc      1260
     gagaccgagc tttgcggccg tgaacaagga gaatgcccag agccaaggac ctcgatcaga      1320
     atcggcactg gcaaggagcc cgacgcggcg gcggagaatc gcgagttggt ggccaagtgc      1380
     gcggccatga tggccatgat gaccaaggct gcggccgaga aggaaacccc acgaacttgg      1440
     tcgacgaaag cttatgagta ccagcacgtc ttcaatgcgt cggtgaaggc ccttatccag      1500
     gcgaaggaat tcgataaggc tgtcgtgaag ctcgacgcta gaaatgccga cctggcattg      1560
     gctgacaagc agcccggtat cctcgctacc ctggacactg ccaagtccta tgctcagggc      1620
     tcaggagaat ccatgtcgaa cgctttggtg agttttttgc ttatacaagc agtaaatgac      1680
     cgagatactt gcagctcgca gcgatcattg ccaacccgcc aaggcgtctg gaccggcgac      1740
     cgaagcaagc agcgtggtgg atacaagcga tacggccagc agccatcctc gtctacggct      1800
     ccccccgcca aatcattccg ctgtttcaag tgcggcagaa acggtcacta tgcctcatcg      1860
     tgtcatgcca agaccaccta ggtccccgga ggccatgaat tcccaagtcg atctcagcac      1920
     atgtccccca gatatgaacc attgctcgtt gttaaataaa gttgttgtcc aaaatccgtt      1980
     tgattctctg gcaagaagtg tgcaggggtg ggaaagtatt ggacacccca gcgaattttg      2040
     aaatccatta gtgaaggata tcggctacca tggagaggcg agcagcgccc cgaggaacaa      2100
     agaccgaatg cacaatctac catggagcac gcagcattcg tcaccgatga ggatgaaaag      2160
     ctgtgctcaa cgggagcggc ggagttagtc ccgagtgaaa ggttaggcga cgtcaaagtg      2220
     atcagtgctc tatcggtttc ggtgaacgcg gatgcgaagt gtagattggt catggatctg      2280
     accacggtga acccgtatat cacagctaac aaaatcaaac tggagaatgt agccatagca      2340
     aagtccctca tccccaagtc aggtttcatg cttacgtttg acatgaaaag tgggtaccac      2400
     caagcaagaa tggctgactc cgagttgatc tatctggcgt tcaggtggga aggcaagact      2460
     ttttggatga aagctttgcc atttgggtta tcctcggccc ccgaatactt caccaagttg      2520
     ttccgacacc cgctggcaac gttgagggga gatggtgtga actgcctttt gtatctggac      2580
     gacctattgg tgtggagtga aacctacgaa ggcgcttgtg aagcttcagc caaagtaagg      2640
     gcgcttttcg ggaagctagg tgtggttctt aacaacgaaa agtcttcggt taccccgcaa      2700
     agagaggtga aatggttagg ggtggtcttt aacctgactc acgggacact caaaatctcg      2760
     aaaaacagaa tcgagaacgc cttggcggca gcggccaggc tgctgaacag gaagcgccca      2820
     tcggcaaagg acaggctcaa gtttacgggt gcattaaact cgatgcacga tgttctcggt      2880
     cccatggcag ccatcagaac aaagtctctt ttctgcttta ttgcatcggt aacccccagg      2940
     ctgggggtga gattagccct gtcagaaagg gagaaagcag acatcaaata ctggcagcga      3000
     aatctggtcg agaggaatgt ctggagaata caagatacca gaccatcgga atatgtgttc      3060
     gcaacggatg catcggcgac aggagtaggc gccgtcaagt tgaacccgaa agatctcaca      3120
     gagctgtctt cagcctatcg ggaattcgat gaatacggag ggaacgacct cgagcaccac      3180
     agggagttac tggcagtgca gttcgcatta catcattact tggcgtcaaa gaagaacacg      3240
     gtagtgacag tcaggactga caatcagaat atcccgagga ttctagctaa gggttcgggt      3300
     gtccaggagt tgaatgagct agtcctgcag gtgacagaat ggtgtgaaca aaggaaagtt      3360
     gagttgatga cgacttggat cccaagggca atgaacagtg cggcggatag agcgtcgagg      3420
     gaaacggacc cagatgattg ggcaatctcg aaagaaatct ttgaaaagtt gacggcaaag      3480
     ttccagaagt gccagtgcga ccggttcgcg tcccataaaa caaaacagct agacaagttc      3540
     atgagcagag ttccgtgccc aggatcagct ggagtcaacg cgttcgcgta ccagtggaca      3600
     gactggtcaa gctggtgtgt acccccaccg gccctactgg tgaggacatg gaagcacatt      3660
     gaatcacatg cctgcgaggg gttgttggta tcgccagatt ggccggcaaa tgtagtggct      3720
     acggcagcaa gcagggcggt aaggaaagga ttcgcgaagc tagtctacag aatcagagcg      3780
     ggcacaaggt gcataacgcc tccggccttc tccacaggtg ctttccagac cccctacgcc      3840
     caatcggacc tccttgtcta ccggttcaac acctttccac ggttctagct atctgtttaa      3900
     cagattgtat cctaaagaaa tcccgatgcg cgtcccccca tttgagtgac aggagcaatg      3960
     gggtgcgaag gagagggagc aacgtagccg cgagggggtc acggtcgaag ttaaaacgat      4020
     agttttcacg cagtgtaacg cagtgtaaaa cggcaggttt tgacggagca gcagttccct      4080
     cgttgggagc gaagagcaga cgcctccgag cgcccaaggc tcctggagcg aaagcctgcg      4140
     cactcggtcg aggaagcagg tgaaacccgg ctagtcgtca ttctagcccg ggttcagcgt      4200
     gagccgcgag taatgatcag attaccgaga cagaagaaaa gaagcaaaaa actgatattc      4260
     caatcacaat tcaggtatgg attcgacgaa catccggaat gagctagcac tgacgctatc      4320
     ggaagcggag gcaaaggatt tggcggaccg tatcgtatca tcagtcagag caccgtcgac      4380
     cctcggcctg tacacgccca tcatccagcg atatgaggaa ttcgcagcca attcatctgc      4440
     gccgtacagt tcatcagtgt tcgcattcct ggcaaagaac tacctaggca agtcgtcatt      4500
     taggacagca gcagcggcat tgaggcttca ttttgtggcg aagggagtct cacctagccc      4560
     gttggacagt gatgccatgg caatgcttag agccgcagcg agccgagaag ccgaagccag      4620
     tccacaggag caaatggctc acagcagacc tgattggcct ggcaaaccat ctcaaaaact      4680
     ccaattccgc cccggataaa aggttgcgta cttggttctc gtgaattacg cgtcgttcat      4740
     gagaccatct gaaggtgtcg ccgttagggt ggaagatgtg gcgtttgagg gcaaccaaat      4800
     gcagattcga atccagaaga cgaaaacaaa ccacaatggc caccgcaaat agcgagttgt      4860
     ggatgcgcat ccggatcacg attgctgccc ggtcaaggcg gtgaaggaat ggctagcaga      4920
     tcccgctaga aaggcttcag aatggttgtt cccgaacttc aacctcgtca cccaacacat      4980
     caagctggac cgtgcccaaa gcgaaatccg taagttgcgg tcccaaggca tcatcccgga      5040
     aggtttcacc ttgcacggcc tcagaggcgg agccaccaca gcatgcatcg aagccggtat      5100
     cccgatcgac gcagtccagc gagccggaag atggtccaat cccaactcca tgaagccgta      5160
     catcgagagg acgacaagaa ccctccaagg aaccaccaat gcaattgccg caggcctccg      5220
     actcgcacaa gacgacgcca gcaaccatcc caacccgaca gaagaatgat gaatccatgc      5280
     gcatcagaag aatctcttaa tatactgaat gatttaatgc catgcttttt gtcgtaatta      5340
     tcaatgctaa gtgtaatcac gtatacgttt aacagttatg taccgaaata aacccgtggc      5400
     gccccccatt tgagtgacag gagcaatggg gccgaaggag agggagcaac gtagccgagg      5460
     ggtacggtgc gaagttaaaa cgatagtttt cacgcagtgt aacgcagtga aaac            5514
//
ID   PFH76     repbase; DNA; INV; 124 BP.
CC   PFH76 DNA
XX
AC   U11817;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Fasciola hepatica clone PFH76 genomic repeat sequence.
XX
KW   Repetitive element.
XX
OS   Fasciola hepatica
CC   liver fluke.
OC   Eukaryotae; Hyperchondria; Eukaryote crown group; Metazoa/Eumycota
OC   group; Metazoa; Eumetazoa; Bilateria; Acoelomata; Platyhelminthes;
OC   Trematoda; Digenea; Echinostomida; Echinostomata; Fascioloidea;
OC   Fasciolidae; Fasciola.
XX
RN   [1]
RP   1-124
RC   [1]  (bases 1 to 124)
RA   Kaplan R.M., Dame J.B., Reddy R.G., Courtney C.H.;
RT   "A repetitive DNA probe for the sensitive detection of Fasciola
RT   hepatica infected snails";
RL   Unpublished
XX
RN   [2]
RP   1-124
RC   [2]  (bases 1 to 124)
RA   Kaplan R.M.;
RT   "Direct Submission";
RL   Submitted (05-JUL-1994) Kaplan R. M., University of Florida,
RL   Infectious Diseases, 471 Mowry Road, Gainesville, FL 32611-0880,
RL   USA
XX
DR   GENBANK; U11817; 89.0.
CC   Positions       1     124  Accession No U11817        GenBank (rel. 89.0)
XX
SQ   Sequence 124 BP; 28 A; 34 C; 23 G; 39 T; 0 other;
     gatcaattca cctatttccg ctagtcctac tggaatttct cttgtaccaa tgtgtttctc        60
     aggccgtgat taccctattg acaaagaatc agcgtgcccg taggacgccg tttaagccca       120
     cttt                                                                    124
//
ID   PFRP1     repbase; DNA; INV; 589 BP.
CC   PFRP1 DNA
XX
AC   M19409;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.falciparum 5.8 kb repeat DNA.
XX
KW   Repetitive sequence.
XX
OS   Plasmodium falciparum
CC   P.falciparum (strain Malayan camp) erythroastic stage DNA, clone
CC   4.10.
OC   Eukaryota; Animalia; Protozoa; Apicomplexa; Sporozoa; Coccidia;
OC   Eucoccidiida; Haemosporina; Plasmodiidae.
XX
RN   [1]
RP   1-589
RC   [1]  (bases 1 to 589)
RA   Suplick K., Akella R., Saul A.J., Vaidya A.;
RT   "Molecular cloning and partial sequence of a 5.8 kilobase pair
RT   repetitive DNA from Plasmodium falciparum";
RL   Mol. Biochem. Parasitol. 30, 289-290 (1988)
XX
DR   GENBANK; M19409; 77.0.
CC   Positions       1     589  Accession No M19409        GenBank (rel. 77.0)
XX
SQ   Sequence 589 BP; 243 A; 75 C; 83 G; 188 T; 0 other;
     taagtatatt atacaaataa tactagagat ttcaaaactc attccttttt ctataaatac        60
     ttgtaaacat agtcatacat gatgcactag ctaatataaa tgtaattgtt aagattaaca       120
     ttcttgatga agtaatgata ataccttcat tacttaatgg atatggtgat aaactaaaat       180
     gtaatatacc ccaaaatatg taaagaataa taaagcttca tgaatattat gatagataac       240
     ataccagaag ttaaagatga aacatacaga ataaaaactt tctcgaatag aatatacaaa       300
     tattaatagg attatagggt taaatgtaaa taatatccct acagaaaagt attttaaaga       360
     tgtaccatat aatgatgtta atgcaggata tgaaactaga tgtgctttta tatttgataa       420
     attactaaat aaaataaatt tataagaacc gtgagataat gtgccgtaaa catataacgg       480
     taagaaggtt cgccggggat aacaggttat agtatatata gagctctaat ctttatatac       540
     tattggcacc tccatgtcgt ctcatcgcag ccttgcaata aataatatc                   589
//
ID   PFRP3     repbase; DNA; INV; 51 BP.
CC   PFRP3 DNA
XX
AC   M93045;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.falciparum repetitive sequence DNA.
XX
KW   Repetitive sequence.
XX
OS   Plasmodium falciparum
CC   Plasmodium falciparum (strain Malayan camp) asexual erythrocytic
CC   DNA.
OC   Eukaryota; Animalia; Protozoa; Apicomplexa; Sporozoa; Coccidia;
OC   Eucoccidiida; Haemosporina; Plasmodiidae.
XX
RN   [1]
RP   1-51
RC   [1]  (bases 1 to 174)
RA   Saul A.J., Yeganeh F., Howard R.J.;
RT   "Cloning and characterization of a novel multicopy, repetitive
RT   sequence of Plasmodium falciparum, REP51";
RL   Immunol. Cell Biol. 70, 357-359 (1992)
XX
DR   GENBANK; M93045; 77.0.
CC   Positions       1      51  Accession No M93045        GenBank (rel. 77.0)
XX
SQ   Sequence 51 BP; 17 A; 10 C; 13 G; 11 T; 0 other;
     gatctgtcgg aaggacagta cacagtaccc aggaaatcta cggattgtat a                 51
//
ID   PFRP4     repbase; DNA; INV; 2446 BP.
CC   PFRP4 DNA
XX
AC   L11892;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Plasmodium falciparum interspersed repetitive element.
XX
KW   Repetitive sequence; interspersed repeat.
XX
OS   Plasmodium falciparum
CC   Plasmodium falciparum DNA.
OC   Eukaryota; Animalia; Protozoa; Apicomplexa; Sporozoa; Coccidia;
OC   Eucoccidiida; Haemosporina; Plasmodiidae.
XX
RN   [1]
RP   1-2446
RC   [1]  (bases 1 to 2446)
RA   Dolan S.A., Herrfeldt J.A., Wellems T.E.;
RT   "Restriction polymorphisms and fingerprint patterns from an
RT   interspersed repetitive element of Plasmodium falciparum DNA";
RL   Mol. Biochem. Parasitol. 61 (1), 137-142 (1993)
RX   MEDLINE; 94081858.
XX
DR   GENBANK; L11892; 89.0.
CC   Positions       1    2446  Accession No L11892        GenBank (rel. 89.0)
XX
SQ   Sequence 2446 BP; 677 A; 481 C; 304 G; 984 T; 0 other;
     ctttactata atttgttgtt tctttactac aacacacaca tataatttta ctactttctc        60
     caatttaatt accacttccg cgtttacttc aacatattac attgttttac caccttgtgt       120
     tcaacctcaa cagtgtgttg cactaaaggt tcaaggttct ccccccgggc tgtttcttta       180
     gcttaggggg gtgaacattg tgatgtgtta gtgtatatgt gtgtgtgtgt aaggggtact       240
     accactagtt ttgtagttgt tggatgtgtt tttagttgtg ttgatgttgt ttgttgggtt       300
     agttgtaccc atttgtggtc atagtttacc aatttttaaa aatttttttt tttttttttt       360
     tccgactttt aactatcaca ttcatgtctc cttgatgtgc ttttaatgat gatatggttt       420
     tttttaattt ttatgaaaat tttacaaaat cgatattttc acctacctgc accctcatgc       480
     atggatgatg ttgtagatga tgtcgttttt gttatactat gttgtgtgca tgatatatat       540
     gtgatgtgtt gacgttgtgg atgtgttttt tatctacatt atgatttact tttatgcttt       600
     tgtttgcatt gtgtgtttac ttatatgcat gggggtgcat ttttttactt acatgatcat       660
     ttttactatc atatgacttc attgagtaaa tttacttctc tttttcttct cttcttggtt       720
     ggactaaatg gttccaaata tcaaagaaac tgagaaagat gtgtgcaaag tgcagcatta       780
     aattcttttt ttacaattta taacatgcac ctctttgcat ttaacaatca tgaacttact       840
     aactgccaat aattactact tcctaacaac atcttcctct ttttcatgaa ctcataatta       900
     tcatgtccaa aatagttaac ccatattcta tttcatgtct cctttgctct ctttttatca       960
     aaacaacctc attttttgct catctatggt cacttacgaa ctaatgaaca cgtccaactt      1020
     caattacgaa acgtcgactt caatactgac aactccaaat aggtctatct catttttcat      1080
     ttttcatcaa aatttctatt ccttaattac ccccaaaaca cactcatttt tacctaatca      1140
     ttccattatg gtgcatggta gtgcatttcg tacttacttt gacactacta ttattaacat      1200
     atttactcat acaacacata atcatcctct gtttattcat tgaaatgcat tgttttcatt      1260
     ttggctaaat tttcccttgc actttccttg cacattgcat gcacttcctc gcatctaatt      1320
     actattactt tgcacacaca ttttacacaa atctgatttt cgacactact atgtaggaaa      1380
     atggtccaac attccccaaa tattactact ttcccatagt aaaaatttag ccatttttga      1440
     aattttccat aggggggggt atttctcttt cggccaattt ttcctaaaaa ttttggacca      1500
     ttttttcaac taattgtcat gactacttca ttcaaaagct aatactgctg catttaagtg      1560
     cttcacattt tcattattat gattttttag tcatcccaat tttggccttc attttcgacc      1620
     aaaagacgtc tttattattt gcacacagaa ttacatacaa tacatccgaa catgtcatta      1680
     caaaacttcg gttccatatt ttgtcttaca actcattact ctcacccaca actaatattt      1740
     ctttgtcaaa aaagtacttc ttttataggg ggaaattgaa cgtgaaattc gggattttcg      1800
     gtcatttttt tacaacgtca tcaaaatatg gtacaccaat ttcgagtgtt ccattatata      1860
     gtccatgact tactatacat acaaaatggt agaacatact tcctactacg tttatatttt      1920
     gtgtgcactt caattttcct tcatagtcca ttttccccta gcactttgct tgcacaattg      1980
     acatgcactt caaagcattc aattactata attttgcaca cacattttta acatgaaaat      2040
     atgaattctg ggtcacttac tatatggtca aatactccaa ttttctctta acattactac      2100
     tttcccatag taaaaattta cccatttttg aaatttttca tagggggggg tatatcaatt      2160
     tttgtcaatt tttcataaaa tttttggtcc attttttcac ttaattgcca caactacttc      2220
     aatcaaaagc taatactgct gcatttaagt gcttgatatt tctataatta ccattttttg      2280
     gtcacccaaa ttttggcctt gattttcgac caaaacatct ctttactatt ctcacacaaa      2340
     attacttaca acacttccga acatgtcatt acaaaatttt cgatccatat tttatcatac      2400
     aacttattac tatcacccac aactaatatt tcttggtcaa aatggg                     2446
//
ID   PPSAT1    repbase; DNA; INV; 156 BP.
CC   PPSAT1 DNA
XX
AC   K02940;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.pollicaris satellite, consensus sequence.
XX
KW   Repetitive sequence; PPSAT1.
XX
OS   Paguras pollicaris
CC   Hermit crab (P.pollicaris) main component DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Malacostraca;
OC   Eucarida; Decapoda; Pleocyemata; Anomura; Paguroidea; Paguridae.
XX
RN   [1]
RP   1-156
RC   [1]  (bases 1 to 156)
RA   Fowler R.F., Skinner D.M.;
RT   "Cryptic satellites rich in inverted repeats comprise 30222034f the
RT   genome of a hermit crab";
RL   J. Biol. Chem. 260, 1296-1303 (1985)
XX
DR   GENBANK; K02940; 77.0.
CC   Positions       1     156  Accession No K02940        GenBank (rel. 77.0)
XX
SQ   Sequence 156 BP; 43 A; 31 C; 35 G; 47 T; 0 other;
     cggaaaacag cctaaatacg tagttttcgg gtatttcagc cacttttggt cagaaagtga        60
     taaaacgccc ccaaatcatg gtttttgtca tttggagtgt gctaacacca aaaaagtcga       120
     tttatgacgg gtttcggggc gattttgcac tttcac                                 156
//
ID   PPSAT2    repbase; DNA; INV; 86 BP.
CC   PPSAT2 DNA
XX
AC   K02943;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.pollicaris satellite, consensus sequence.
XX
KW   Repetitive sequence; PPSAT2.
XX
OS   Paguras pollicaris
CC   Hermit crab (P.pollicaris) main component DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Malacostraca;
OC   Eucarida; Decapoda; Pleocyemata; Anomura; Paguroidea; Paguridae.
XX
RN   [1]
RP   1-86
RC   [1]  (bases 1 to 86)
RA   Fowler R.F., Skinner D.M.;
RT   "Cryptic satellites rich in inverted repeats comprise 30222034f the
RT   genome of a hermit crab";
RL   J. Biol. Chem. 260, 1296-1303 (1985)
XX
DR   GENBANK; K02943; 77.0.
CC   Positions       1      86  Accession No K02943        GenBank (rel. 77.0)
XX
SQ   Sequence 86 BP; 15 A; 18 C; 27 G; 26 T; 0 other;
     caggtccgga cctgcaaaaa aagttgagtt ttgggccccg aaattttttg ggctgttttt        60
     ggcggttttc ggcaggtccg gacctg                                             86
//
ID   PPSAT3    repbase; DNA; INV; 89 BP.
CC   PPSAT3 DNA
XX
AC   K02941;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.pollicaris satellite, consensus sequence.
XX
KW   Repetitive sequence; PPSAT3.
XX
OS   Paguras pollicaris
CC   Hermit crab (P.pollicaris) main component DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Crustacea; Malacostraca;
OC   Eucarida; Decapoda; Pleocyemata; Anomura; Paguroidea; Paguridae.
XX
RN   [1]
RP   1-89
RC   [1]  (bases 1 to 89)
RA   Fowler R.F., Skinner D.M.;
RT   "Cryptic satellites rich in inverted repeats comprise 30222034f the
RT   genome of a hermit crab";
RL   J. Biol. Chem. 260, 1296-1303 (1985)
XX
DR   GENBANK; K02941; 77.0.
CC   Positions       1      89  Accession No K02941        GenBank (rel. 77.0)
XX
SQ   Sequence 89 BP; 22 A; 20 C; 27 G; 20 T; 0 other;
     caggtccgga cctgtgagat ttcgccaaaa atttggggtt tcgacacggg aaatttttcg        60
     ggccagaaaa gtcgacaggt ccggacctg                                          89
//
ID   PRSAT1    repbase; DNA; INV; 142 BP.
CC   PRSAT1 DNA
XX
AC   M76467;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   P.ratzeburgii satellite repeat sequence.
XX
KW   Constitutive heterochromatin; heterochromatin repeat;
KW   satellite repetitive element; PRSAT1.
XX
OS   Palorus ratzeburgii
CC   Palorus ratzeburgii DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga;
OC   Tenebrionoidea; Tenebrionidae.
XX
RN   [1]
RP   1-142
RC   [1]  (bases 1 to 142)
RA   Ugarkovic D., Plohl M., Lucijanic-Justic V., Borstnik B.;
RT   "Detection of satellite DNA in Polorus ratzeburgii: Analysis of
RT   curvature profiles and comparison with Tenebrio molitor satellite
RT   DNA";
RL   Biochimie 74, 1075-1082 (1993)
XX
DR   GENBANK; M76467; 77.0.
CC   Positions       1     142  Accession No M76467        GenBank (rel. 77.0)
XX
SQ   Sequence 142 BP; 53 A; 19 C; 26 G; 44 T; 0 other;
     gaatccgaaa caaaatcgtt ccttaaatac gaaatgcgaa tgatttaaga acgtttgcag        60
     agaaatctgg ctgatacatt cgctaatttt taaaattaag cagtaaaatg taaagtttgc       120
     atggtttcag ctgtatttaa ga                                                142
//
ID   PST1      repbase; DNA; INV; 168 BP.
CC   PST1 DNA
XX
AC   X56472;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.scalaris Pst-1 major satellite family unit.
XX
KW   Pst-1 repeat; Pst-1 satellite family; satellite DNA;
KW   repetitive sequence; PST1.
XX
OS   Stauroderus scalaris
CC   Stauroderus scalaris
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Orthoptera.
XX
RN   [1]
RP   1-168
RC   [1]  (bases 1 to 168)
RA   Rafferty J.A.;
RT   "Direct Submission";
RL   Submitted (05-NOV-1990) J.A. Rafferty, PATERSON INST. FOR CANCER
RL   RESEARCH, CHRISTIE HOSPITAL, WILMSLOW RD, MANCHESTER M20 9BX, UK
XX
RN   [2]
RP   1-168
RC   [2]  (bases 1 to 168)
RA   Rafferty J.A., Fletcher H.L.;
RT   "Sequence analysis of a family of highly repeated DNA units in
RT   Stauroderus Scalaris (Orthoptera)";
RL   Unpublished
XX
DR   GENBANK; X56472; 77.0.
CC   Positions       1     168  Accession No X56472        GenBank (rel. 77.0)
XX
SQ   Sequence 168 BP; 51 A; 27 C; 37 G; 53 T; 0 other;
     ctgcaggtgc agtgtgcagc ctggtaaacg taaaataata aattacattg tctaagagga        60
     ctagagccgt ttaattgtgt atatatcgtg ttttgtgcat ttccatggaa acgacttatt       120
     gtcatttcta acttctaaaa gcatggatac tagtgccata caggagag                    168
//
ID   R1        repbase; DNA; INV; 5092 BP.
CC   R1 DNA
XX
AC   M19755;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   R1 repeat family.
XX
KW   Repetitive element R1; transposon.
XX
OS   Bombyx mori
CC   Bombyx mori DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Glossata;
OC   Bombycoidea; Bombycidae.
XX
RN   [1]
RP   1-5092
RC   [1]  (bases 1 to 5243)
RA   Xiong Y., Eickbush T.H.;
RT   "The site-specific ribosomal DNA insertion element R1Bm belongs to a
RT   class of non-long-terminal-repeat retrotransposons";
RL   Mol. Cell. Biol. 8 (1), 114-123 (1988)
RX   MEDLINE; 88094376.
XX
DR   GENBANK; M19755; 89.0.
CC   Positions      44    5135  Accession No M19755        GenBank (rel. 89.0)
XX
SQ   Sequence 5092 BP; 967 A; 1281 C; 1751 G; 1093 T; 0 other;
     tgacttcgcc gtcggccttg gtcgaggaca gacgtgcgtt ccgttatttc tttattttcc        60
     gtcatttaag tgtattgtgt ttctattggt gtatcggacc ctctcgtttc ggcttgaggt       120
     ttaagtcata agacgccgcg gccatcttgc tgtgtgagcg gtgtgacgag tgcgaaggcg       180
     gagtttagct cgacgtggag tcggcccctc tcgcttcctc ttgggtgccg gtccatatag       240
     gtcggtgtcc atattggatt gcgtgtgaga cggccgattt gcgtgagggc ggacccgcca       300
     tttaggtctg tgacagtgac actagtgtgc gatagtgacg ttttataatt tgctgtgggc       360
     ggtagccgcc attttgtgat agtgacactc gaggatgcga cagtgacgtt ggtttgtgtt       420
     tgtgttcgtg tgcgtgtgtg aatatctttg cgtgatagta atataatttg gaacaatgtc       480
     ggaggaggag agggagctat tttcccctcg ggtctctttg gcgcgctcgc cgcctagggg       540
     accgactgca cctctgccgg cgcctatgcc gccgccggcc ccccgggggg ttagggcggg       600
     agcggctatg agtgccaaag gccggaggac cggcctgcat atcccggttg cttctggact       660
     gtcgtcctcg gcgcctgtca ccccggttga cccagtggct ggtgtcccta gcttccccat       720
     tcctgttgcg tcgggggctc cgactggacc ccttgatgta gcagcgcagg ggaggctgga       780
     gctgctcgag cgggcaaacc gagcggtgcg cgggatcatg tcggtggcga cggcggcatc       840
     taagctcaat aagtcggagg tcaatctaat ctctgaactc ggtcgcgata tcctggccgt       900
     agttggggcc ctcgggatcc agctctctga taaggagctg gtggtcgaaa ggctccgctc       960
     ggcagaggcc tctgcacggc gtgactccgt ggcgccttcg atggctgctg gtgcggcggc      1020
     cgggtctggg actgggcctg cgaccttcgc cactgtcctc aggacgggcc ctggtggggt      1080
     cccgaggtcc attggggcct ctcaggggcc ttccttggca ttctacccgt ccgagggcaa      1140
     tgcggaactg aagacagctg aggacacaaa gaaagaggta aaaaaggcca ttgaccctaa      1200
     gtcaatggct attggaatac agagcgtaag gaaggttggg aatgcggggg tagtggtgca      1260
     gaccacgtcc cccggggccg cagtcaagct tagaaatgct gccccgccat cactgagagt      1320
     caccgaaccc aggcgccgac agcccttagt agctgtcaat ggcgtggagg gcgacccctc      1380
     cttcgaggag gtaatcgagt gcctggctag ccagaacctc gacccggagg agtggcccct      1440
     cactagggta cgagcggagc tcacgggggc gttcaaaaag gggaggcgac aatccaacaa      1500
     cactactgtg gtgtttaacg cctcccctcg catcagggac gccctcgtga agattggcag      1560
     agtgtatgtg gggtgggtcg cctgtgaggt cacggacttt gtccgggtga cctgctgcaa      1620
     taagtgtcag caatatggtc acccggagaa attttgccgg gccaaggagg ccacctgtgg      1680
     ccgatgtgga gaggatggcc accgaatgga ggcctgtaag gcagcctccg cgtgctgtgc      1740
     gacctgccgg cgattccgtc gcgaggctat gcacccgacg gcctcgcgcg actgtccggc      1800
     gcgccggcat gcggaggagc gcttcctaaa tcaggtcgag tatggatatt aggccccgac      1860
     ttcgtattgg ccaaatcaat ctgggtggtg cagaggatgc gacgagggag ctaccctcca      1920
     ttgcacggga tctcggcctg gatattgttc ttgtacagga acaatattcc atggtcgggt      1980
     tcctagccca atgtggagca caccccaagg cgggtgtgta tatccgcaat agggtgctcc      2040
     cctgcgcggt tctgcaccac cttagcagca cacatataac ggtagtgcac attggggggt      2100
     gggacttata tatggtgtct gcgtacttcc agtatagtga ccctattgac ccatacctgc      2160
     accggctcgg gaatattctt gaccggctgc ggggggctcg ggtcgttatc tgcgcagaca      2220
     ctaatgccca ctcgccattg tggcactcgc tgcccaggca ctacgtcggt cggggtcagg      2280
     aagtggctga ccgccgcgcc aagatggagg atttcattgg ggcgaggcgg ttggtcgtcc      2340
     ataacgcgga tggccacctg ccgaccttca gtacggcgaa cggagaatct tatgtcgatg      2400
     tcacgctgtc tacgcgggga gtacgcgtgt ctgaatggcg tgtaactaat gaatcatcga      2460
     gcgatcaccg gctcattgtg tttggggtgg ggggcggtac aacaggggag cgggacgagg      2520
     acgaggaggc gcggagcgat ttgaggccgg gcgagccgtg cgcactgcgt cggtaccggg      2580
     accgtggggt ggattgggac ctcttcagat cgcgtatcca cgagcgaatg gggagtctgg      2640
     acctcgagga acctgtggct gccctttgcg aaaaatttac cggggttata actcgcacag      2700
     ctgaagaatg cttaggatca ctgaaagcag atagaactga caggggttat gagtggtgga      2760
     ccccagtact cgataagctt agggtagccc agggtagggc caggcgtcga tggcaaaagg      2820
     cccgccgaac ggggggtgag gaagaggagc agtctgggag agtcttccgc gaccgcaggc      2880
     gcgagtatcg aagagcgatg catgacgctg agaccgcctt ttaccgggag atcgctgaag      2940
     ggggaaaccg tgacccgtgg ggactagcgt atcggacggc gagtggtagg cgacgcgcac      3000
     caactaatgt ggttaacggg gtggagtatg cggggcggtg ctcggatgat gtgagtgggg      3060
     ccatgcgcac cttgatgtgg gcgctgtgtc cggatgacta tatgtctcgg gacactccgt      3120
     accatgcgcg ggtgcgtatc atggccgcgc tccccccatc cgggcgggac gcagacccgc      3180
     tgagcaaaga ctcccttcgt gccataattg gctcactgaa gaataccgca ccgggcatcg      3240
     acggtttaac ggcgcgcatt atcaaaaagg cacttccggc tgctgaggcc gagttcgtgg      3300
     ccgtatacgc acggtgcgtt gtggagggga ccttcccgcc ggtgtggaag gatggccgcc      3360
     tacttgttct gccaaagggg aatggcaggc ccttaacgga ccctaaggcg tatcgcccgg      3420
     tcaccttgct gccggtcctg ggaaagatct tggagaaggt attattgcag tgtgctcctg      3480
     gcctcaccca tagtattagt ccgcgccagc acgggttctc tcctggacgc tcaacggtga      3540
     cggcgctgcg aactctgctg gacgtgtcgc gcgcctcgga gcagaggtac gtaatggcca      3600
     tattcttgga catcagtgga gctttcgata acgcgtggtg gcccatgata atggtgaagg      3660
     ccaagcggaa ctgtccgccc aacatctatc ggatgctgac ggactatttc cgcggacgcc      3720
     gtattgccgt tgtcgcgggg gaatgtgcgg aatggaaggt gtccacgatg ggctgtccgc      3780
     agggctcagt gctcgggccg acgctctgga acgttctgat ggatgacctg ctcgccttgc      3840
     cgcaggggat agagggaaca gagatggtcg cctatgccga tgacgtgacg gtactggtta      3900
     ggggtgactc acgggcgcag cttgagagga gagcgcacgc cgtgctagga ctcgcagagg      3960
     ggtgggcgag caggaataag ctcgattttg ccccggcgaa gtcccgatgc ataatgctga      4020
     ggggaaagtt tcagcgtccc cctatagtcc ggtacggcag tcatgtcatt cggttcgaga      4080
     accaggtgac ggtgttgggc gtctcttcga cgattgcctc tctttcgcgg catgcggcgg      4140
     ccattggcga gagggcgagc aggtgcttcg gcaagatgtc tagagtttcg gcttcggctt      4200
     gggggctgcg atatagggct ttgcgtgtct tgtacatggg cacttatgtt acaaccctta      4260
     cctatgcggc ggccgtatgg tatttgcggg ctgctgtgca cgtcgtgcgc agcgtgctgc      4320
     ttaggacgca gcgcccgtcg ttgacgctgc taacgaaggc ctaccgttcg tgcagcacgg      4380
     ctgctttgcc ggtgttggcg ggcgtcctgc cggcggacct ggaggtgact cgtgctggac      4440
     ggaggatgcg ggagtgcgaa ggattggcgc gggagttggc ggcggagaga cgacgacgga      4500
     tcgacggcga tgtcttggta gtttggcaga acaggtgggt gtctgagggt aaggggaggg      4560
     aactgtacaa gttctttccc gatgttgcgg acaggaagaa ggcaacgtgg atggagccgg      4620
     actatcagac ctcgcagatc ctcacgggtc atgggatctt taataagcgg ttggcggata      4680
     tgcgactgag ggaggggcat gcttgcgact gcggggcggt tgaggaggat agggaccatg      4740
     tcctgtggga gtgtcctctc tatgacgaaa tccggggcag gatgctcgat ggaatctcgc      4800
     ggtctgaggt gggcccagtt taccacgcgg acctggtcag ggacgagaaa aattttcggc      4860
     tcttgcgcga gttcgcgata catggcacac ggcgcgcact gcgcgcgaat cacgaggact      4920
     gcctggcgac gaagaatgtg ggtgatgtta gcagccccag aacggggaga atgctagtgg      4980
     agtgaagggg acggtgttag tttgtagaac cgatcggtac cttggtgccg tgaagttcat      5040
     gcttcggtcc taataaccgc aaggttggtg ggaccatggg aggtggtggg aa              5092
//
ID   RSAI      repbase; DNA; INV; 151 BP.
CC   RSAI DNA
XX
AC   M32422;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   G.morsitans centralis RsaI repetitive sequence.
XX
KW   RsaI repetitive sequence.
XX
OS   Glossina morsitans
CC   G.morsitans centralis DNA, clone GMC3.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
OC   Cyclorrhapha; Schizophora; Muscoidea; Glossinidae.
XX
RN   [1]
RP   1-151
RC   [1]  (bases 1 to 151)
RA   Trick M., Dover G.A.;
RT   "Unexpectedly slow homogenisation within a repetitive DNA family
RT   shared between two subspecies of Tsetse fly";
RL   J. Mol. Evol. 20, 322-329 (1984)
XX
DR   GENBANK; M32422; 77.0.
CC   Positions       1     151  Accession No M32422        GenBank (rel. 77.0)
XX
SQ   Sequence 151 BP; 45 A; 36 C; 31 G; 39 T; 0 other;
     actacaggtc catgacaaac tcgcccaatg tgctgcacgt agcatttgat gaaccacagc        60
     aagctattag aatgcgcggt atgctaaatg ttgcttttga tacagaacaa cgatttcaga       120
     atttgttgta acggctctca gcaccacacg t                                      151
//
ID   RT1       repbase; DNA; INV; 8037 BP.
CC   RT1 DNA
XX
AC   M93690;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Anopheles gambiae RT1 retroposon.
XX
KW   Nucleic acid binding protein; retroposon; reverse transcriptase.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Culicidae; Anophelelinae.
XX
RN   [1]
RP   1-8037
RC   [1]  (bases 1 to 8071)
RA   Besansky N.J., Paskewitz S.M., Mills-Hamm D.M., Collins F.H.;
RT   "Distinct families of site-specific retroposons occupy identical
RT   positions in the rRNA genes of Anopheles gambiae";
RL   Mol. Cell. Biol. 12, 5102-5110 (1992)
RX   MEDLINE; 93024457.
XX
DR   GENBANK; M93690; 89.0.
CC   Positions      18    8054  Accession No M93690        GenBank (rel. 89.0)
XX
SQ   Sequence 8037 BP; 2175 A; 1995 C; 2212 G; 1655 T; 0 other;
     agtgtcaaac gtgaggtcgt actgtaccga cacgttgtgt ttgggctccg aaaaaaggac        60
     ttaaaaacag tgcaaaatcg tcgttaatcg actttaatag tgtgaaaaac gtgctcaggg       120
     cacctgattt accctttaag agcgttatca agtgttttta aggcgaaaat tcaacaaaaa       180
     tcgtgcattt gtgtttgttg cctatgaacc ccccaccatg tgtttgtgtg acatggtgta       240
     aaagcagaaa atcgaaaaaa gtgcccaaaa agtgccagaa ttgcacgatt ttagtgtaaa       300
     cagtgcatct gagcacgaaa aaaggtgtta agaagtgatc cgcgcatgaa aaaaccacaa       360
     aattgtgaaa aaaaagtttt gcgtcatcca gcccatactg ggccaagtaa tcgccggatc       420
     tgtgttttca gcgatataat ttgcccagat tctcgccggg tgtggttttt aaggccatcg       480
     ggtggccaaa gaacgttcat ccagtgaaaa ccgatcgaaa atcggccgtt tgtgaccgaa       540
     aaaaagtgaa ataatattta atattattcg gtgaacaaat ttacgaaaat tcggttccag       600
     gtgaaattgg gtgaaattgg gtgggttgac tgtacggccc ctgatggccc ctgagttaag       660
     gtgccgttac acgagtaacc atagtttagg tgaccatcga cgtgcggaaa atttttgtga       720
     catcggccta ttgcgaatgc tcaccgtgtg tttgtgtgac gtggtgcaaa agaagaaatt       780
     cgaaaaaagt gcccaaaatg tgcctgagtt gcactatttt agtgtaaaca gtgcatctga       840
     gcacgaaaaa aggtgttaag aagtgatccg cgcatgaaaa aaaccacaaa attgtgaaaa       900
     tagttttgcg tcatccagcc catactgggc caagtaatcg ccggatctct gtttgcaggg       960
     atataatttg cccagattct cgccgggtgt ggtttttaag gccatcgggt ggccaaagaa      1020
     cgttcatcca gtgaaaaccg atcgaaaatc ggccgtttgt gaccgaaaaa aagtgaaata      1080
     atatttaata ttattcggtg aacaaattta cgaaaattcg gttccaggtg aaattgggtg      1140
     ggttgactgt acggcccctg acggcccctg agttaggcat cggttgtcaa acggcctgac      1200
     agctcggacg gaccgatcgt taaggtgccg ttacacgagt aaccatagtt taggtgacca      1260
     tcgacgggcg gaaaatgttt gtgacatcgg cctattgcga atgctcaccg tgtgtttgtg      1320
     tgacgtggtg ctaaagaaga aattcgaaaa gtgcccaaaa tgtgcctgag ttgcactatt      1380
     ttagtgtaaa cagtgcatct gagcacgaaa aaaggtgtaa agaagtgatc cgcgcatgaa      1440
     aaaaccacaa aattgtgaaa aaagttttgc ggtcatccag cccatactgg gccaaggttt      1500
     cgccggatct ctgttttcag cgatataatt tgcccagatt ctcgccgggt gcggttttta      1560
     aggccagcgg gtggccaaag aacgttcatc cagtgaaaac cgatcgaaaa tcgcccgttc      1620
     tgtgaccgaa aaaagtgaaa taatatttaa tattattcgg ggaacaaatt tatgaaaatt      1680
     cggttccggg tgaaattggg tgggttgact gtacggcccc tgacggaccg attgttaagg      1740
     tgccgtcaca cgagtaacca tagtttaggt gaccatcgac gtgcagaaaa tttttgtttt      1800
     tttttgtgac atctgccaat tgcgaatact caccgtgtgc ttgtgcgacg tggtgcaaaa      1860
     acagaaattc gaaaaaagtg cccaaaatgt gcctgagttg cactatttta gtgtaaacag      1920
     tgtatctgag cacgaaaaaa ggtgtgacat cagtttgaca gctaagcaga ggaatttcaa      1980
     agtggcataa cttcggcacc cgccaagcta tcccgacggg aaagtgttgc ctgtggaagc      2040
     ggtatcgaaa tctttcaggg cagggtgaaa tatttcactt tggaaatatt tcacattttg      2100
     aatttttttt tttttttttt tttttttttt tttttttttt tttttttttt tttttttttc      2160
     ttctcttcaa aaaaaaacca tcttccatgt gcgcgggcgt caggcagagt gcgtcgggct      2220
     gccatcaaac cctcaagtag gtgcgcgttt gtgaaagcgg ccctgaaatc tttcagggag      2280
     ggtgaaatat ttcacttttg aaatatttca aaatttgaaa tttttcaaca tttcaaaaat      2340
     ccgttctcca tcggttttct tgacgaacct aaaaccgggg gtcggtttct gacgcctcgt      2400
     tggcgagagt gcgggcgtta ggcatagtgc gtcgggctgc caacaaaccc tcaagtaggt      2460
     gcgcgcaacg ttgaaaccaa catgtcgggg ctgggcggtg atgcccatcc ccaagggagc      2520
     tcgggacgag tacttcgccc gagggctcga tcggtgtccc tcaaccgggt cgacgcatta      2580
     aaagtgtctg actcaacacc ggtggagcca ccacccaccg caggcatcgt ctacttgagt      2640
     gatgatgaag aagaagaatt gaactgcacg atcctcgcgg gcccgtcggg attagcagtt      2700
     ccaccaatgg ggaaggtgcc attggtagtg ctggacaagt tgcccagcca gagtcaacag      2760
     cgcgaggaga tgacggtacc ggccacctca acaccaaagg ctggtaagtg ttcttctgct      2820
     gaaccatctc tctcagagat gaacgagagc ttgaagctcc tggccatgca ggttgctcag      2880
     ctctcaaagg agcttagcct ctgccgtaag gagctccagg aaagtttgat gaaaaatgcg      2940
     gcgcttgaac gggagctcga aacgtacagg atgggcgccc gttcggtcat cgagctgcag      3000
     cagcaagcag cagcagcccc aatgatgaca gcccagggag cccacagctc tcgcaaccgt      3060
     cgcggtcgcc aaggaccaca gcagcaggag cagcggcagc agcagcaaca gcatcagcag      3120
     cgggaacagc agcagcagca gcagcagcag cagcagcagc agcagcagca acaacaacag      3180
     cagcagcgga accagcagcg tgaatggcag cagcagcagc agcagcagca gcatcaacag      3240
     cgagaacagc agcagcagca acgggtgcag caacagaatc agcagcacca acgtcagcag      3300
     cagcagcagc agcagcagcg gcaacagcaa cagcagcagg agcagcaaga attatggacg      3360
     acggtagtgc gccgccgtca aaatacacag cagcagcagc agtctaacca accgcagcaa      3420
     caacaacagc agactgggcg gtatcagccg ccgcaaatga ggcagcagct acagcagcaa      3480
     cagcagcaac gacagccaca gcgatatgtg gtcgcaggct cgtcgcaaca gcagcagcag      3540
     cagcatcaac agcagcagca gaagcgtaag cgtcctaagc ccgaactgat agagatctct      3600
     cctggtcaga acgagacttt cgagagcgtc tccttgaaaa tccgtaaagc cgttgacgat      3660
     aatggcacac ataaggagtt aaaggatttc atcatcatgg gccggcgcac agataaggcg      3720
     ttgctacgac tgacgcttgc tagatccgca aacgcgacct taattctcca gcagatccga      3780
     acgatcatcg gcgaggctgg aacttgtcga cacgtgacgg aaatggcggc cttggtagta      3840
     aacgacatcg accccctagc caaggaggaa gagcttacag ctctccttga aaacaagatc      3900
     gagggtgggg caggcatcgt ctcaacgagc attaggacaa tgccggatgg cacccagcgg      3960
     gcacgcgtcc gtctgccagc caaggccgcc aaagcgctgg atggtacgaa gcttcgcttg      4020
     ggcttctgca tttccagagt gaagatggct cctccaacac ccaaagagca tcttcgctgc      4080
     taccgatgcc ttgagcacgg ccacaacgcc cgcgattgtc ggtcacctgt agaccgacaa      4140
     aatgtttgca tccgttgcgg acaggaaggt cacaaggctg gtacatgcat ggaagaaata      4200
     cgctgcggca aatgcgatgg cccccatgtt atcggggacc ggacatgcga tcggtcggcc      4260
     acccaatgac gcagctaaaa gtcctccaag tgaacctggg tggaggcagg atcgcccaag      4320
     atctggtcct gcaaaccgcc cgacaaatgg aagtggacgt gctggttctt tcccacacgt      4380
     atcgaccacc cgagaacaac ccaagatggg cagttgatgc ctccaaaaag gtggcagtcg      4440
     tggccacagg acgataccct ctacaaggac aatggagcag tgatgttcca ggccttatag      4500
     ctgccaaggt gggtggcatc accttcctaa gctgctacgc gccacccagc ctgtcgcggg      4560
     aaggatttgc ggaattcgtt gaagcaattg aattggaagc ccaatcccac cctcaggtag      4620
     tagttgccgg agactttaac gcttggcatg aggagtgggg aagccgacgc agcaatgagc      4680
     gtggggaagt actgctcgag gcgtcccagc aattgggcct gctgctgatg aatcgaggga      4740
     atgtggcaac ctttgttgga aacggtgtgg cgactgccag cgttgtcgac gtgaccttcg      4800
     ccagctcgtc catagctcag ccgagcactt ggttggtaag aaacacggac acgcgatctg      4860
     accataggta tatcacctat tcggtaggcc cagcgtcagc agaccagcag cgtaaccaag      4920
     gacagtcacg tcaacggggc cagcgagagc gttttcaaca tgcaggcacg cgatttaaga      4980
     cgaaacagtt ctcgaaagag aatttcctgg ccacgctaca tggcgaggga ttccgagaga      5040
     aggcagtcaa tcaccaggga atgatctcgg caatgatatc ggcctgcgag aaaaccatgc      5100
     aaaggatgac gtcgtctttc cccgaccctc atcgggacgt ttactggtgg acgccactga      5160
     ttgctctgct taggcaaaac tgcgagcaga cgagagatcg catgcagcag acaagtgatc      5220
     tccagaaccg aagtctggct gcagcccaat accgaacagc taaagctgag ctggatagag      5280
     ctatacgtgc cagcaaaaag gccgccttcc aggaattgat cgatgctgcg gaggaaaacg      5340
     ttttcggagc cgggtactta gtagtcctct cccgtcttcg cggtggaagg gccccacccg      5400
     agacggagag agcgaggctt gaaagcatcg ttacagagct tttcccgcaa catccgccct      5460
     tcaactggcc cagcatcagt tccgaggaag aacaggaaca gcctgcagac cagcagactc      5520
     catggaccca agtcacgatc ccggaactcc gtctgatagc tagcaccatg ccgaacaaaa      5580
     aagcgccggg ccttgacgga attccgaacg ccgctgtcaa ggctgcaatc cttgcgtaca      5640
     cggacgtttt ccaggcgttg taccaaagct gtctggaaac ggctacattt ccagcaccat      5700
     ggaaacgaca gcggttggta ctgctcccca agccggggaa accaccgggt agcaacgggt      5760
     cataccgacc tttgtgcatg ctggatgcct tagggaaagt gctggagaag ctcattctaa      5820
     acagacttca caaccacctg gaagatcctg ctgcggtgag gctgtcagac aggcagcatg      5880
     gcttccggag ggggcgatct acaattggcg ccattcgaac agtgatcgag gctggtcaga      5940
     gcgcgatgag attccgccgc acgaacgggc gggataacag gttcctgctg gtcgtgtcaa      6000
     tggatgtcaa gaatgccttc aatacggcaa gctggcaggc catcgccact gcactgcaga      6060
     tgaaaggagt acctgctggt ctgcaaagaa tcgtgaggag ctacttcgag aaccgagagt      6120
     tggtcttcga gacatccgac ggcccagtaa ctcggtccat cacggctggt gttccacagg      6180
     gttcgattct tggccccacc ctgtggaaca ccatgtacga tggagttctg gacgtcgccc      6240
     ttccgcagga ctgcgagatg gtggcgtatg ctgacgactt ggtgctgctg attccgggca      6300
     tcgacgtaaa tgcagtgaag gctgcagccg aggaggcggt cgccagtgtc tctcactgga      6360
     tggctcaaca tcatctccag attgcgccgg aaaagacgga gtgcgtgctt atctccagca      6420
     cgaagaaccc tacgcaggtc accataagag taggggacgt ggaggtgaca tcttcccgca      6480
     cgatgcgtta ccttggggtg acccttcacg atcacctatc gtggctgccc catgtccgag      6540
     aggtaaccac tcgggcaagg aagatagcag atgccgttac ccgcctcttg cgcaaccaca      6600
     gtggaccaaa gaccagcaaa gcgcgactgt tggcctcggt cgcagagtcg gtcatccgat      6660
     atgctgcgcc catctggcat ggcgaggtga cgaagagaga gtgtcgtcga cttttggaga      6720
     gggttcagcg agtctcagca cggagggtgg cacgcacctt ccgtaccgta aggtatgaga      6780
     ccgccaccct cctcgccggg ctgaccccca tctgtctctt gatagaggag gatgcgcgag      6840
     tgttcgagcg tgttaatgat ccgggtcggt cgataacgaa ggcagccatc cggttggagg      6900
     agaggcagcg caccatcacg atgtggcaga gccaatggga cgccgaggcc gacacctcca      6960
     gatacacccg gtggacgcat cggataatcc gcgacatcag cgcttggcaa ggccggagac      7020
     acggggagat gaccttccac ttggcccagg tgctctctgg acatgggttc ttcagagagt      7080
     acctggccat caacggcttt acggaatccc ctgactgtcg cagctgtgcg ggtgttccgg      7140
     aaaatgccca tcacgccatc ttcgaatgcc ccaggtttgc tcgagtgagg atggagtact      7200
     ttggtgaact ggggccgaat ccggtcacgc cggacagtct tcaggacttc cttatgggca      7260
     gccaagacaa ctggagcagc ttctgtgagg cggcacgtcg aataacaaca acgctgcagc      7320
     gtgactggga cacggaacga gaacagcggg ctgcttccaa tcgtgaggaa gctgaaatac      7380
     aacagcagct acagcgagag gaagacgaac gccgcactga agaacggcgg cagctccaca      7440
     atgaggcaaa tcgtgcctac cgccagcgca ataggagaag tcaacctact ccaccagctc      7500
     caccaccaac acccagggag gccgctcgcc tcgaagatgg gcgacggaga gtggcccgct      7560
     ggcgggaaag acaacgaatg attcggaacg gtggaatcca aatgctacga gcgctgttcg      7620
     gccatgatgc ctggtcgagc gaaagtgacg atgaacccga tgacgtcgag cgaggcggac      7680
     ttgatgctgc ccagcaggca gcagcagccg aagccgaaag agcggcacgc taaagctaac      7740
     tttagtaaaa agaacaacga aagtgtaaaa aaaaaaaaga gaaaggtgct tcggtacaga      7800
     tatagggctc cccttaaggg aatgaattca gaggaacagt ttggaaaata gaatttcaac      7860
     ttaaattaaa cggaaaggtg cgaacgcacg gctaaaaagt taggctccct atgagcatca      7920
     cgtccaccct taaatccctt cgcagggcat aaggggcgga ttatgagagg gctgggtttt      7980
     cttttcgatg taacatacga tcaataaaaa tccactcgat ataaaaaaaa aaaaaaa         8037
//
ID   SCAI_EH   repbase; DNA; INV; 118 BP.
CC   SCAI_EH DNA
XX
AC   X61182;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   E.histolytica ScaI repeat.
XX
KW   Sca I repeat.
XX
OS   Entamoeba histolytica
CC   Entamoeba histolytica
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Sarcodina;
OC   Rhizopoda; Lobosa; Gymnamoeba; Schizopyrenida; Tubulina;
OC   Entamoebidae.
XX
RN   [1]
RP   1-118
RC   [1]  (bases 1 to 3699)
RA   Bhattacharya S.;
RT   "Direct Submission";
RL   Submitted (01-AUG-1991) S. Bhattacharya, Jawaharlal Nehru
RL   University, School of Enviromental Sciences, New Delhi 110067,
RL   INDIA
XX
RN   [2]
RP   1-118
RC   [2]  (bases 1 to 3699)
RA   Mittal V., Sehgal D., Bhattacharya A., Bhattacharya S.;
RT   "A second short repeat sequence detected downstream of rRNA genes in
RT   the Entamoeba histolytica rDNA episome.";
RL   Mol. Biochem. Parasitol. 54, 97-100 (1992)
XX
DR   GENBANK; X61182; 77.0.
CC   Positions    1894    2011  Accession No X61182        GenBank (rel. 77.0)
XX
SQ   Sequence 118 BP; 49 A; 12 C; 15 G; 42 T; 0 other;
     tttaatgaaa agtactaaat acaaagtaca ataatttcta attgtgaaaa tcaaaggaat        60
     tattcaaaat ggtcgtcgta tagatgaaat aattttttac taatttacac cgttgatt         118
//
ID   SGALPHA   repbase; DNA; INV; 359 BP.
CC   SGALPHA DNA
XX
AC   X52936;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Alpha repetitive DNA.
XX
KW   Alpha repetitive sequence; repetitive DNA; SGALPHA.
XX
OS   Schistocerca gregaria
CC   desert locust.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa/Eumycota group;
OC   Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Neoptera; Orthopterodea; Orthoptera;
OC   Caelifera; Acrididae; Cyrtacanthacridinae; Schistocerca.
XX
RN   [1]
RP   1-359
RC   [1]  (bases 1 to 359)
RA   Brown T.;
RT   "Direct Submission";
RL   Submitted (01-MAY-1990) to the EMBL/GenBank/DDBJ databases. Brown
RL   T., UMIST, Dept of Biochemistry & Applied Molecular Biology,
RL   Manchester M60 IQD, UK
XX
RN   [2]
RP   1-359
RC   [2]  (bases 1 to 359)
RA   Brown T.A., Barker S.
RT   ;
RL   Unpublished
XX
DR   GENBANK; X52936; 89.0.
CC   Positions       1     359  Accession No X52936        GenBank (rel. 89.0)
XX
SQ   Sequence 359 BP; 106 A; 66 C; 84 G; 103 T; 0 other;
     aagcttctaa gttaaagcaa tagccagtaa gaagtagtac aattcaagtt ttagttgtcg        60
     attattcact ttttagccgg ctttggtggc ttggacatga cctaggacct taagattttg       120
     catgaaagga ggactagcag ccgcgtggca cgggagaatg tgaaaagtgt tcatatgtag       180
     taaaaacctg agaaatccgt ccgttttcgt cattttttta tcgaatcgac ttaaagccag       240
     atcgtcacat tggccgcttt tgtctctgag atggttacat ttatcgtctg caaagctata       300
     tcgcgtgcag cgctatgggg agacactaaa agcaccatag tagaaaacag aagaagctt        359
//
ID   SGRP1     repbase; DNA; INV; 193 BP.
CC   SGRP1 DNA
XX
AC   X73982;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.gregaria repetitive element.
XX
KW   Repetitive element.
XX
OS   Schistocerca gregaria
CC   desert locust.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa/Eumycota group;
OC   Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Neoptera; Orthopterodea; Orthoptera;
OC   Caelifera; Acrididae; Cyrtacanthacridinae; Schistocerca.
XX
RN   [1]
RP   1-193
RC   [1]  (bases 1 to 1223)
RA   Dawes R., Dawson I., Falciani F., Tear G., Akam M.;
RT   "Dax, a locust Hox gene related to fushi-tarazu but showing no
RT   pair-rule expression";
RL   Development 120 (6), 1561-1572 (1994)
RX   MEDLINE; 94326653.
XX
RN   [2]
RP   1-193
RC   [2]  (bases 1 to 1223)
RA   Akam M.;
RT   "Direct Submission";
RL   Submitted (08-JUL-1993) to the EMBL/GenBank/DDBJ databases. M.
RL   Akam, Wellcome/CRC Institute, Tennis Court Road, Cambridge CB2 1QR,
RL   UK
XX
DR   GENBANK; X73982; 89.0.
CC   Positions     288     480  Accession No X73982        GenBank (rel. 89.0)
XX
SQ   Sequence 193 BP; 51 A; 63 C; 43 G; 36 T; 0 other;
     attcttctgt aacaccacat ttcgaaagct tctattcccc tagacttaga actgcttaaa        60
     cctaactaac acaaggacag cacacacatc catgcccggg gcaggcttcg aacctgcgac       120
     cgtagcagca gcgcgggttc ggactgaagg gcctagaacc gctcgcccac agcggccggc       180
     catcctggta aca                                                          193
//
ID   SK        repbase; DNA; INV; 256 BP.
CC   SK DNA
XX
AC   D14862;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   SK repeat family.
XX
KW   SINE; SK repetitive sequence; short interspersed repeated sequence.
XX
OS   Loligo bleekeri
CC   Loligo bleekeri DNA, clone NO28.
OC   Eukaryota; Animalia; Eumetazoa; Mollusca; Cephalopoda; Coleoidea;
OC   Teuthoidea; Myopsida; Loliginidae.
XX
RN   [1]
RP   1-256
RC   [1]  (bases 1 to 364)
RA   Ohshima K., Koishi R., Matsuo M., Okada N.;
RT   "Several short interspersed repetitive elements (SINEs) in distant
RT   species may have originated from a common ancestral retrovirus:
RT   characterization of a squid SINE and a possible mechanism for
RT   generation of tRNA-derived retroposons";
RL   Proc. Natl. Acad. Sci. U.S.A. 90, 6260-6264 (1993)
RX   MEDLINE; 93317662.
XX
DR   GENBANK; D14862; 89.0.
CC   Positions      56     311  Accession No D14862        GenBank (rel. 89.0)
XX
SQ   Sequence 256 BP; 61 A; 68 C; 68 G; 59 T; 0 other;
     cggtttagct cagtcggtag agcatccgcc tcgtaacgac aaggttccgg gttcgatacc        60
     ggttcccgcc aactcagcgt atgagtagca cggcttggat ctgtgcggta aagtggggag       120
     ctgatggtag gagtggcgct ccacctcaga cgcaaaaaac aatatccctg gtctagcgct       180
     agcgaaaagg gaatatacta cctcgctgtt cggctgatac cgacaatacg ccacttcgcc       240
     tacgtctaat ttactt                                                       256
//
ID   SP2109AA  repbase; RNA; INV; 273 BP.
CC   SP2109AA mRNA
XX
AC   K01645;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus 2109A repeat element.
XX
KW   2109A repetitive sequence; repetitive sequence.
XX
OS   Strongylocentrotus purpuratus
CC   Sea urchin (S.purpuratus) oocyte, cDNA to poly(A) RNA, clone
CC   p2109A-10.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-273
RC   [1]  (bases 1 to 273)
RA   Posakony J.W., Flytzanis C.N., Britten R.J., Davidson E.H.;
RT   "Interspersed sequence organization and developmental representation
RT   of cloned poly(A) RNAs from sea urchin eggs";
RL   J. Mol. Biol. 167, 361-389 (1983)
XX
DR   GENBANK; K01645; 77.0.
CC   Positions       1     273  Accession No K01645        GenBank (rel. 77.0)
XX
SQ   Sequence 273 BP; 74 A; 51 C; 54 G; 94 T; 0 other;
     ggatcaggat ttgtaactct cctacatcag ctctatgttg ccaacctctc gatgaagcta        60
     ttgctgcaaa ctctttgagt gtagcattcc aactttgaaa caggggggca tttcacaaaa       120
     cttatcatca gtgacaaatg acagtttttt ttataagcta ccggtactga aatccttgct       180
     tatgactggt tatcagcaga tttgtttctg atttttgtca tttttcattg aaaaaaaggc       240
     tttgtgaaac gggtccttgg tttactaaag gag                                    273
//
ID   SP2109AB  repbase; RNA; INV; 203 BP.
CC   SP2109AB mRNA
XX
AC   K01648;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus 2109A repeat element.
XX
KW   2109A repetitive sequence; repetitive sequence.
XX
OS   Strongylocentrotus purpuratus
CC   Sea urchin (S.purpuratus) oocyte, cDNA to poly(A) RNA, clone
CC   p2109A-18AR1/2.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-203
RC   [1]  (bases 1 to 203)
RA   Posakony J.W., Flytzanis C.N., Britten R.J., Davidson E.H.;
RT   "Interspersed sequence organization and developmental representation
RT   of cloned poly(A) RNAs from sea urchin eggs";
RL   J. Mol. Biol. 167, 361-389 (1983)
XX
DR   GENBANK; K01648; 77.0.
CC   Positions       1     203  Accession No K01648        GenBank (rel. 77.0)
XX
SQ   Sequence 203 BP; 69 A; 28 C; 38 G; 68 T; 0 other;
     agcaaaagta gagtaatgtc caagctgagg ccgtgaattt ttctgcaaag catttaacac        60
     tgatttaagg cccctctggt ccttatgtat tgattaacta catgtatatt tattcatttg       120
     agtagaaaaa aaactgtaaa ataacatgca taagtgatgg acgtctgaat atttaaacat       180
     tttgtaaata gtgctagttt gtg                                               203
//
ID   SPEC1     repbase; RNA; INV; 472 BP.
CC   SPEC1 mRNA
XX
AC   J01207;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus spec1 repetitive sequence.
XX
KW   Repetitive sequence.
XX
OS   Strongylocentrotus purpuratus
CC   sea urchin (s.purpuratus) cdna to mrna.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-472
RC   [1]  (bases 1 to 472)
RA   Carpenter C.D., Bruskin A.M., Spain L.M., Eldon E.D., Klein W.H.;
RT   "the 3' untranslated regions of two related mrnas contain an element
RT   highly repeated in the sea urchin genome";
RL   Nucleic Acids Res. 10, 7829-7842 (1982)
XX
DR   GENBANK; J01207; 77.0.
CC   Positions       1     472  Accession No J01207        GenBank (rel. 77.0)
XX
SQ   Sequence 472 BP; 168 A; 78 C; 79 G; 147 T; 0 other;
     tataaagcac atgtatagat gcaattgtta aaacaatgat tacataacac ttgcaagaat        60
     acattcaaag ataaaattac taagatatta tgacaaaaac cctctcaatc tggacctcta       120
     ggaagatcag agccattcaa taatttaacg gtccttaata gagctattca tccgtattta       180
     ttttaaataa ttatatttgt ttatgttcat gggcatgtaa tatgtttgtt taaacggaaa       240
     atgaaaccaa accaatctag agcccggcac taacgtcctt tggcaaggca ttaattcaca       300
     tttaccactc tccacccagg tgtataaatg ggtacctagc aattgatggg gtaatgataa       360
     atgcagggcc cgcaggacag cagtattgat actgatgttc gctagcctga gtttaaaaaa       420
     atattattat cattattaat agtagtagta gtagaagtac tagtatttta tt               472
//
ID   SPRP1     repbase; DNA; INV; 190 BP.
CC   SPRP1 DNA
XX
AC   J01194;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus repetitive sequence  (clone lambda-2109B-18).
XX
KW   Repetitive sequence.
XX
OS   Sea urchin sp.
CC   Sea urchin DNA, clone lambda-2109B-18.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea.
XX
RN   [1]
RP   1-190
RC   [1]  (bases 1 to 190)
RA   Posakony J.W., Scheller R.H., Anderson D.M., Britten R.J.,
RA   Davidson E.H.;
RT   "repetitive sequences of the sea urchin genome: iii. nucleotide
RT   sequences of cloned repeat elements";
RL   J. Mol. Biol. 149, 41-67 (1981)
XX
DR   GENBANK; J01194; 77.0.
CC   Positions       1     190  Accession No J01194        GenBank (rel. 77.0)
XX
SQ   Sequence 190 BP; 44 A; 40 C; 39 G; 67 T; 0 other;
     tcgagtgtat aaactgtgtt gttatcagtg gcgtcgatcg ctcgacgttt cattaaatta        60
     ttagagaaag aagacgattc gttgtactgt tttcgactcc taatccttgt ctgaataaag       120
     tttcccccct cccgcgcgaa acgcggaagc tttggcgttt catttgatta taactcttaa       180
     tccttgtttg                                                              190
//
ID   SPRP2     repbase; DNA; INV; 247 BP.
CC   SPRP2 DNA
XX
AC   K01794;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus histone H1-H4 spacer repeat.
XX
KW   Repetitive sequence.
XX
OS   Strongylocentrotus purpuratus
CC   Sea urchin (S.purpuratus; 7N) sperm DNA, clone 7N32L.
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-247
RC   [1]  (bases 1 to 397)
RA   Vitelli L., Weinberg E.S.;
RT   "An inverted sea urchin histone gene sequence with breakpoints
RT   between TATA boxes and mRNA cap sites";
RL   Nucleic Acids Res. 11, 2135-2153 (1983)
XX
DR   GENBANK; K01794; 77.0.
CC   Positions     247       1  Accession No K01794        GenBank (rel. 77.0)
XX
SQ   Sequence 247 BP; 50 A; 64 C; 71 G; 62 T; 0 other;
     cggacgaccc gggactgtct cctcccacgt acgcaacaat gccttatatt gatggcgttg        60
     ccgagcctca accggattgc agcgagtatt gttacaccat tgcggacttg ggtgacgaga       120
     ttcggcatca ttcggtatgc gggactggag tgcggagact ccccattcga gtgcgccccc       180
     tcgtggcgag tattcgctag cattattaca tgcatttatg tagagaggcc tgtgttgaat       240
     gctcgag                                                                 247
//
ID   SU7N33    repbase; DNA; INV; 195 BP.
CC   SU7N33 DNA
XX
AC   X05414;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus histone H4-H2B spacer 7N33 intermediate
DE   repetitive sequence.
XX
KW   Repetitive sequence.
XX
OS   Strongylocentrotus purpuratus
CC   sea urchin
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-195
RC   [1]  (bases 1 to 234)
RA   Yager L.N., Kaumeyer J.F., Lee I., Weinberg E.S.;
RT   "Insertion of an Intermediate Repetitive Sequence into a Sea Urchin
RT   Histone-Gene Spacer";
RL   J. Mol. Evol. 24, 346-356 (1987)
XX
DR   GENBANK; X05414; 77.0.
CC   Positions      20     214  Accession No X05414        GenBank (rel. 77.0)
XX
SQ   Sequence 195 BP; 84 A; 29 C; 26 G; 56 T; 0 other;
     tcaagttcaa gttcaagttc gtttatttac actcatcatt aaaaatacaa gaacatatac        60
     aatcaaatac ggaataatca cacataaaat atcatacatt caataacaac aaaataacat       120
     aacataatgg gagtgaaggg atgagctaaa aaggagtatg gtccttatgt tagagttcat       180
     tccttagtat aatat                                                        195
//
ID   SURF1     repbase; DNA; INV; 333 BP.
CC   SURF1 DNA
XX
AC   X07085;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus retroposon-like DNA sequence SURF 1-1.
XX
KW   Repetitive element; interspersed repeat; retroposon.
XX
OS   Strongylocentrotus purpuratus
CC   sea urchin
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-333
RC   [1]  (bases 1 to 1117)
RA   Nisson P., Hickey R.J., Boshar M.F., Crain W.R.;
RT   "Identification of a repeated sequence in the genome of the sea
RT   urchin which is transcribed by RNA polymerase III and contains the
RT   features of a retroposon";
RL   Nucleic Acids Res. 16, 1431-1452 (1988)
XX
DR   GENBANK; X07085; 77.0.
CC   Positions     535     867  Accession No X07085        GenBank (rel. 77.0)
XX
SQ   Sequence 333 BP; 86 A; 64 C; 70 G; 113 T; 0 other;
     cagatataag tattatatct cgcaattcgc atttcattcg catatatgga tatgggtttc        60
     gtatagtctc cgggctgtgg ttcgcggttc gagtccctcc gcgacactaa tgtcctttgg       120
     cacgacaaca aattaaatgt gttactctcc acccaggtgt attaaattac ctggtaggaa       180
     ttgtattcct tgaatacctt tacatcttag ggtagctggg ctaaagcagg gtaataatac       240
     tactttgtat aggcgccctt gggcatattc tgggatggat acgtgcgcaa tataaatgta       300
     gctagtattg ttattattat tatcattatt acc                                    333
//
ID   T2        repbase; DNA; INV; 335 BP.
CC   T2 DNA
XX
AC   X15618;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.mansoni retroposon-like repetitive element t-2.
XX
KW   Interspersed repeat; repetitive sequence; retroposo; T2.
XX
OS   Schistosoma mansoni
CC   Schistosoma mansoni
OC   Eukaryota; Animalia; Eumetazoa; Platyhelminthes; Trematoda;
OC   Digenea; Strigeidida; Strigeata; Schistosomatoidea;
OC   Schistosomatidae.
XX
RN   [1]
RP   1-335
RC   [1]  (bases 1 to 335)
RA   Spotila L.D., Hirai H., Rekosh D.M., LoVerde P.T.;
RT   "A retroposon-like short repetitive DNA element in the genome of the
RT   human blood fluke, Schistosoma mansoni";
RL   Chromosoma 97, 421-428 (1989)
XX
DR   GENBANK; X15618; 77.0.
CC   Positions       1     335  Accession No X15618        GenBank (rel. 77.0)
XX
SQ   Sequence 335 BP; 108 A; 82 C; 71 G; 74 T; 0 other;
     aatttcaact tcacaccatt gcacaagcaa gtggctatca aaactcagtg gctgagtgga        60
     caacgcgatg gcgtttgaag cgaaagctac tgggttcgag tcccagagtg aacatcaaca       120
     ctgagatgca ggtacatcca actgaccagt cggaaattgg acgaaacgcg cgtcctggat       180
     tccactgcta gccaccatcc atctttgctt accatgcttg tgaatttagg ctatatcgag       240
     gcaatacgca cagtatgcac atatgacaat tacagactga ccggttgcag tcctaaacac       300
     atcaatagga agatccaaac aaacaatact aagta                                  335
//
ID   TAQI_CC   repbase; DNA; INV; 170 BP.
CC   TAQI_CC DNA
XX
AC   M15723;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   C.captiva TaqI repetitive sequence.
XX
KW   Repetitive sequence.
XX
OS   Caledia captiva
CC   C.captiva (Gundaroo race, individual 1A-6) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Orthopterodea; Orthoptera; Caelifera;
OC   Acrididea; Acridoidea; Acrididae.
XX
RN   [1]
RP   1-170
RC   [1]  (bases 1 to 6544)
RA   Arnold M.L., Appels R., Shaw D.D.;
RT   "The heterochromatin of grasshoppers from the Caledia captiva
RT   species complex. I. Sequence evolution and conservation in a highly
RT   repeated DNA family";
RL   Mol. Biol. Evol. 3, 29-43 (1986)
XX
DR   GENBANK; M15723; 77.0.
CC   Positions     502     671  Accession No M15723        GenBank (rel. 77.0)
XX
SQ   Sequence 170 BP; 46 A; 28 C; 34 G; 62 T; 0 other;
     gatgtgcgca ttctatgtac tattgcctgt ggtttgcttt attacttatt ttaacgctca        60
     actcgccttt tttcattaca ttggcattaa atggagtgta tattatgaaa attgagagat       120
     aaaaatactt agaagggctg ccactggaac agtggttcac tgcatagttc                  170
//
ID   TBKIN1    repbase; DNA; INV; 1004 BP.
CC   TBKIN1 DNA
XX
AC   J01454;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.brucei kinetoplast closed minicircle repetitive sequence.
XX
KW   Origin of replication; repetitive sequence; TBKIN1.
XX
OS   Kinetoplast Trypanosoma brucei
CC   Trypanosoma brucei kinetoplast minicircle DNA.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-1004
RC   [1]  (bases 1 to 1004)
RA   Chen K.K., Donelson J.E.;
RT   "Sequences of two kinetoplast DNA minicircles of Trypanosoma brucei";
RL   Proc. Natl. Acad. Sci. U.S.A. 77, 2445-2449 (1980)
XX
DR   GENBANK; J01454; 77.0.
CC   Positions       1    1004  Accession No J01454        GenBank (rel. 77.0)
XX
SQ   Sequence 1004 BP; 380 A; 62 C; 213 G; 349 T; 0 other;
     cagaaaacag tataatttta gtagtatagg ataaaatatc tacagaaata tggcaaggtg        60
     gttagaggaa aagaaatatg ataatagata agaattagaa ttttatagtt atatatgata       120
     gtaaataaaa caaacagtgt atatggtctc agagatattg tataattatg gtgatttata       180
     gttattaatt attgtaatat atttattatt atattttaag ccaagggaga taaaaatgat       240
     agaattagta tggagtaagt tgggtgagga tgggagttgt aattgtaata ttgaagttaa       300
     gaagatgtag gtaaagttag gtaaagttag gtaaagttag gtaaagttag gtaaagttag       360
     agggtggtat atgaaaagtt gaagttagaa cgtaatagat aaaactattg aaaatggtga       420
     aaatggtgaa aaaatagcga tttctgagct cgaaaaaacc gaaaatctta tgggcgtgca       480
     gatttcacca tacacaaatc ccgtgctatt ttggggggtt tttgaggtcc gaggtacttc       540
     gaaaggggtt ggtgtaatac tcacacggtt tttcctcgag attttcatga ttttggtgtt       600
     tgtgggtttc gagactagat gtttgtgatt ttaatttgag atttatccta tgaaaagaaa       660
     tgagataata gatagacttg aagtaattat agataatatc attgtatata tattaacaaa       720
     taagccatta acaggtagat gaagtgtata tatagattat aaattttata tattatttat       780
     gtatatattt attatattat tttttattat agggagatag gaggtgattt gatcttggtg       840
     agataagaga aatgggataa tagatacgat ataaaagata ttataattaa tcatagtata       900
     tatactgggt aatcatggat ttatgtagtg agataaagtg agtaaataac tataaaataa       960
     agtaaattaa tatactatta tattctttta tttatatagg gctg                       1004
//
ID   TBRP1     repbase; DNA; INV; 794 BP.
CC   TBRP1 DNA
XX
AC   L08172;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.borreli repeat sequence.
XX
KW   Repetitive sequence.
XX
OS   Trypanoplasma borreli
CC   Trypanoplasma borreli (strain Pg-JH) DNA.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Bodonidae.
XX
RN   [1]
RP   1-794
RC   [1]  (bases 1 to 794)
RA   Maslov D.A., Elgort M.G., Peckova H., Simpson L., Campbell D.A.;
RT   "Organization of mini-exon and 5S rRNA genes in the kinetoplastid
RT   Trypanoplasma borreli";
RL   Unpublished (1993)
XX
DR   GENBANK; L08172; 77.0.
CC   Positions       1     794  Accession No L08172        GenBank (rel. 77.0)
XX
SQ   Sequence 794 BP; 247 A; 193 C; 126 G; 228 T; 0 other;
     aacttacgct ataaaagtca cagtttctgt actatattgg tattagaagc tttccggatt        60
     catttctgga caattttttt ataagatctt cggatctttt tttttgtcca tttttttatt       120
     ttttccgaaa aagggagtac gacactttgg gggttcccaa gccatcactg acctctgttc       180
     ttattaatta ttatgtacgt gataagtttg gcgttatatc tatcaagaaa cacatttatt       240
     ttaccttttt attgattctt tcactttttc acggcgttta cacggaaaac cgtgattggg       300
     gggaaagggc ggtaaaacga caaaaatccc tttaaaaacc cgttaataaa gcatataata       360
     agcttatttt gcaaaaaagg tggtttggaa ggtcaaaaag tatcccaact tttcaaaaaa       420
     acaacaacca cccaatgaca accacaataa tcccactata aactacacgc aaatgggaaa       480
     accctacttt ttttaaatac gtaattttta ctataatgtc ccctactccc tggcccctag       540
     gggcaaagca caccaaaccc ctttccacca atagcggcca agcatgctat aggtgcatca       600
     gggggcattt gcgggtgacc ttatcacccc cccagccctt ttacaccacc acatcgaccc       660
     aaaaattcaa caattcctca ccccaaaaac cccccttaga acccaagggg actttggagg       720
     cttcaaaaag tcccccgagg ctctggagcc cgcaaacata tagtcgctcg aaaaaaaaac       780
     actacagttc tttc                                                         794
//
ID   TBSAT1    repbase; DNA; INV; 177 BP.
CC   TBSAT1 DNA
XX
AC   K00392;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.brucei satellite dna.
XX
KW   Repetitive sequence; satellite repetitive element; TBSAT1.
XX
OS   Trypanosoma brucei
CC   trypanosoma brucei (stock 427) dna.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-177
RC   [1]  (bases 1 to 177)
RA   Sloof P., Bos J.L., Konings A.F., Menke H.H., Borst P.A.,
RA   Gutteridge W.E., Leon W.;
RT   "characterization of satellite dna in trypanosoma brucei and
RT   trypanosoma cruzi";
RL   J. Mol. Biol. 167, 1-21 (1983)
XX
DR   GENBANK; K00392; 77.0.
CC   Positions       1     177  Accession No K00392        GenBank (rel. 77.0)
XX
SQ   Sequence 177 BP; 64 A; 24 C; 28 G; 61 T; 0 other;
     ctaataaatg gttcttatac gaatgaatat taaacaatgc gcagttaacg ctattataca        60
     caataacttt taatgtgtgc aatattaatt acaagtgtgc aacattaaat acaagtgtgt       120
     aacattaatt tgcaagtttg caacgctgtt ctttagtgtt taatgtgtgc aacaaag          177
//
ID   TBVSG     repbase; DNA; INV; 191 BP.
CC   TBVSG DNA
XX
AC   K00617;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.brucei repetitive sequence.
XX
KW   Repetitive sequence.
XX
OS   Trypanosoma brucei
CC   trypanosoma brucei (t.brucei) strain 427 (variant 118a), mboi
CC   fragment library of van der ploeg et al., .7kb pvuii fragment from
CC   clone cpr1.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-191
RC   [1]  (bases 1 to 191)
RA   De Lange T., Liu A.Y., Van der Ploeg L.H., Borst P.A., Tromp M.C.,
RA   van Boom J.H.;
RT   "tandem repetition of the 5' mini-exon of variant surface
RT   glycoprotein genes: a multiple promoter for vsg gene transcription?";
RL   Cell 34, 891-900 (1983)
XX
DR   GENBANK; K00617; 77.0.
CC   Positions       1     191  Accession No K00617        GenBank (rel. 77.0)
XX
SQ   Sequence 191 BP; 49 A; 46 C; 37 G; 55 T; 4 other;
     acggcttgyg cacaggcccc tttgtttccc ataggtctac cgacacattt ctggcacgac        60
     agtaaaatat ggcaagtgtc tcaaaactgc ctgtacagct tatttttggg acacagccat       120
     gctttcaact aacgctatta ttagaacagt ttctgtacta tattggtatg agaagctccc       180
     artrrcagct g                                                            191
//
ID   TCB1      repbase; DNA; INV; 989 BP.
CC   TCB1 DNA
XX
AC   X54217;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Caenorhabditis briggsae TCb1(#5) repetitive element.
XX
KW   Inverted repeat.
XX
OS   Caenorhabditis briggsae
CC   Caenorhabditis briggsae.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa/Eumycota group;
OC   Metazoa; Eumetazoa; Bilateria; Pseudocoelomata; Nematoda;
OC   Secernentea; Rhabditia; Rhabditida; Rhabditina; Rhabditoidea;
OC   Rhabditidae; Caenorhabditis.
XX
RN   [1]
RP   1-989
RC   [1]  (bases 1 to 989)
RA   Harris L.J., Prasad S., Rose A.M.;
RT   "Isolation and sequence analysis of Caenorhabditis briggsae
RT   repetitive elements related to the Caenorhabditis elegans
RT   transposon Tc1";
RL   J. Mol. Evol. 30 (4), 359-369 (1990)
RX   MEDLINE; 90264942.
XX
RN   [2]
RP   1-989
RC   [2]  (bases 1 to 989)
RA   Harris L.;
RT   "Direct Submission";
RL   Submitted (19-NOV-1991) to the EMBL/GenBank/DDBJ databases. Harris
RL   L., Agriculture Canada, Plant Research Centre, Bld. 21, Central
RL   Experimental Farm, Ottawa, Ontario Canada K1A 0C6
XX
DR   GENBANK; X54217; 89.0.
CC   Positions       1     989  Accession No X54217        GenBank (rel. 89.0)
XX
SQ   Sequence 989 BP; 314 A; 180 C; 185 G; 310 T; 0 other;
     cagtactggc cataaagaat gcgacaactt gttttttgac gataactttt tgaaaactca        60
     acttttcaac tcgaattttt tactgtagac acattggaaa gttacgaaaa cttgcgtact       120
     tggaaattgc atcatcttgc aaacaaaatt ttttttcaat tgttttcatt ttttttttca       180
     ttttgcatat ttttcatgat ttttggtttt tttaaataaa gttgaaagac aactaattgg       240
     aattagtttt agttgattat tttattgttt ttcagatatg gttagaccat tcggaaaaaa       300
     tccttctctg tggacgagcg aaaaagcatt gtgcgtggtc atgaactcgg cgcgcatccg       360
     aagatacttg caactcagtt tagttgttct tccagccaaa tttaccgtat tctgaagaaa       420
     aatcgagatg atgtgaggtt tcaatcagct ttctcaacta aatttaacaa tttagaatgg       480
     cgttgttcat cgccaatctc caggaagacc ccgaaccact tccagaaata tggatcggaa       540
     cattttgcgc gcatgccgag aagatcctag acgcacatct acgggtattc aactttctgt       600
     gacgtctcca aatgaaccgg taccatcgag aagaactatt agaagacgtt tgcaagttgc       660
     tggactgcac ggacgaagac cagtcaaaaa accactcgtc agtttgaaaa accgaaaagc       720
     tcgcgttgaa tgggctaaac agcacttgtc ctggggcccc cgtgagtggg caaatcacat       780
     ctggagcgat gaatcgaagt tcaatatgtt cgtgaatttt cgaaaaaaat taattttcaa       840
     aaaaattgta gcagaatatt aaaaccaact tagcctaaaa gtttttgata gtgctgaaaa       900
     aatcttacca aaaattcgga ttgaaaagtt gagttttcaa aaagttatct tcaaaaaaca       960
     agttgtcgca ttctttatgg ccagtactg                                         989
//
ID   TCKIN2    repbase; DNA; INV; 122 BP.
CC   TCKIN2 DNA
XX
AC   M18815;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.cruzi kinetoplast minicircle DNA, clone pTc-21.
XX
KW   Minicircle; repeats; TCKIN2.
XX
OS   Kinetoplast Trypanosoma cruzi
CC   T.cruzi (strain CL) kinetoplast DNA, clone pTc-21.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-122
RC   [1]  (bases 1 to 1393)
RA   Degrave W.M., Fragoso S.P., Britto C., van Heuverswyn H.,
RA   Kidane G.Z., Cardoso M.A.B., Mueller R.U., Simpson L.,
RA   Morel C.M.;
RT   "Peculiar sequence organization of kinetoplast DNA minicircles from
RT   Trypanosoma cruzi";
RL   Mol. Biochem. Parasitol. 27, 63-70 (1988)
RX   MEDLINE; 88142975.
XX
DR   GENBANK; M18815; 89.0.
CC   Positions     315     436  Accession No M18815        GenBank (rel. 89.0)
XX
SQ   Sequence 122 BP; 23 A; 19 C; 38 G; 42 T; 0 other;
     tggtttttgg gaggggcgtt caacttttgg ggcggaaatt catgcatctc ccccgtacat        60
     tattttggcc aaaatcctaa tttttcgggg aggtggggtt cgattggggt tggtgtaata       120
     ta                                                                      122
//
ID   TCORP1    repbase; DNA; INV; 198 BP.
CC   TCORP1 DNA
XX
AC   M84610;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Trichostrongylus colubriformis DNA repeat regions.
XX
KW   Repetitive sequence.
XX
OS   Trichostrongylus colubriformis
CC   Trichostrongylus colubriformis (tissue library: pUC18) DNA.
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Secernentea; Rhabditia;
OC   Strongylida; Strongylina; Trichostrongyloidea; Trichostrongylidae.
XX
RN   [1]
RP   1-198
RC   [1]  (bases 1 to 1092)
RA   Callaghan M.J., Beh K.J.;
RT   "A middle-repetitive DNA sequence element in the sheep parasitic
RT   nematode, Trichostrongylus colubriformis";
RL   Parasitology 109 ( Pt 3), 345-350 (1994)
RX   MEDLINE; 95060997.
XX
DR   GENBANK; M84610; 89.0.
CC   Positions     724     921  Accession No M84610        GenBank (rel. 89.0)
XX
SQ   Sequence 198 BP; 54 A; 32 C; 67 G; 45 T; 0 other;
     aaattcatat ctcgcgtcgc agtagagctg ggaccctgaa tgtttaaagt gatagagggg        60
     gtggtaaggg aacatcaatg gtgggggaac ggaagtgata gcaactgata agggctgata       120
     aggagcctcg agtggctaat gggcgggtaa attcatatct cgccgtcgca gtggagctgg       180
     gaccctgaat ttttgaag                                                     198
//
ID   TCRP1     repbase; DNA; INV; 204 BP.
CC   TCRP1 DNA
XX
AC   M21330;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.cruzi antigen DNA repetitive element.
XX
KW   Repetitive element; tandem repeat.
XX
OS   Trypanosoma cruzi
CC   T.cruzi DNA, clone 1.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-204
RC   [1]  (bases 1 to 204)
RA   Ibanez C.F., Affranchino J.L., Macina R.A., Reyes M.B.,
RA   Leguizamon S., Camargo M.E., Aslund L., Pettersson U.,
RA   Frasch A.C.;
RT   "Multiple Trypanosoma cruzi antigens containing tandemly repeated
RT   amino acid sequence motifs";
RL   Mol. Biochem. Parasitol. 30, 27-34 (1988)
XX
DR   GENBANK; M21330; 77.0.
CC   Positions       1     204  Accession No M21330        GenBank (rel. 77.0)
XX
SQ   Sequence 204 BP; 46 A; 57 C; 76 G; 25 T; 0 other;
     agcatgaatg cccgcgcaca ggagctggcg cgcgagaaga agcttgccga ccgcgcgttc        60
     cttgaccaga agccggaggg cgtgccgctg cgagagctgc cgctcgacga cgacagcgac       120
     tttgttgcga tggagcagga gcgcagacag cagctcgaga aggacccgcg caggaacgcg       180
     aaggagattg ctgcgcttga ggag                                              204
//
ID   TCRP2     repbase; DNA; INV; 114 BP.
CC   TCRP2 DNA
XX
AC   M21331;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.cruzi antigen DNA repetitive sequence.
XX
KW   Repetitive element; tandem repeat.
XX
OS   Trypanosoma cruzi
CC   T.cruzi DNA, clone 36.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-114
RC   [1]  (bases 1 to 114)
RA   Ibanez C.F., Affranchino J.L., Macina R.A., Reyes M.B.,
RA   Leguizamon S., Camargo M.E., Aslund L., Pettersson U.,
RA   Frasch A.C.;
RT   "Multiple Trypanosoma cruzi antigens containing tandemly repeated
RT   amino acid sequence motifs";
RL   Mol. Biochem. Parasitol. 30, 27-34 (1988)
XX
DR   GENBANK; M21331; 77.0.
CC   Positions       1     114  Accession No M21331        GenBank (rel. 77.0)
XX
SQ   Sequence 114 BP; 23 A; 39 C; 35 G; 17 T; 0 other;
     gccttgccgc aggaagagca agaggatgtg gggccgcgcc acgttgatcc cgaccacttc        60
     cgctcgacga ctcaagacgc gtacaggccc gttgatccct cggcgtacaa gcgc             114
//
ID   TCRP3     repbase; DNA; INV; 145 BP.
CC   TCRP3 DNA
XX
AC   M63895;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.cruzi ribosomal intergenic spacer repeat.
XX
KW   Ribosomal intergenic spacer; spacer repetitive sequence.
XX
OS   Trypanosoma cruzi
CC   Trypanosoma cruzi (strain G) DNA.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-145
RC   [1]  (bases 1 to 1174)
RA   Novak E.M., Mello M.P., Gomes H.B., Galindo I., Guevara P.,
RA   Ramirez J.L., Franco da Silveira J.;
RT   "Repetitive sequences in the ribosomal intergenic spacer of
RT   Trypanosoma cruzi";
RL   Unpublished (1991)
XX
DR   GENBANK; M63895; 77.0.
CC   Positions       6     150  Accession No M63895        GenBank (rel. 77.0)
XX
SQ   Sequence 145 BP; 38 A; 41 C; 46 G; 20 T; 0 other;
     gtcggagcag ggacagcaga aagggagcaa tggtgcgggg tgctggcggc gcatccaccc        60
     agcgacgtct accgccgcgg cttcttcagg acaggagccc gtaaagcagc taacatctgg       120
     aacctctccc agtggaaaca aaaat                                             145
//
ID   TCRP4     repbase; DNA; INV; 62 BP.
CC   TCRP4 DNA
XX
AC   M63895;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.cruzi ribosomal intergenic spacer repeat.
XX
KW   Ribosomal intergenic spacer; spacer repetitive sequence.
XX
OS   Trypanosoma cruzi
CC   Trypanosoma cruzi (strain G) DNA.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-62
RC   [1]  (bases 1 to 1174)
RA   Novak E.M., Mello M.P., Gomes H.B., Galindo I., Guevara P.,
RA   Ramirez J.L., Franco da Silveira J.;
RT   "Repetitive sequences in the ribosomal intergenic spacer of
RT   Trypanosoma cruzi";
RL   Unpublished (1991)
XX
DR   GENBANK; M63895; 77.0.
CC   Positions     261     322  Accession No M63895        GenBank (rel. 77.0)
XX
SQ   Sequence 62 BP; 25 A; 7 C; 16 G; 14 T; 0 other;
     gacaagatga aagtatgagg gaaagatggc aacgcataac atcaataata tgcttgtgtt        60
     ga                                                                       62
//
ID   TCSAT1    repbase; DNA; INV; 196 BP.
CC   TCSAT1 DNA
XX
AC   K00393;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.cruzi satellite dna.
XX
KW   Repetitive sequence; satellite repetitive element; TCSAT1.
XX
OS   Trypanosoma cruzi
CC   trypanosoma cruzi (strains y and sonya) dna.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-196
RC   [1]  (bases 1 to 196)
RA   Sloof P., Bos J.L., Konings A.F., Menke H.H., Borst P.A.,
RA   Gutteridge W.E., Leon W.;
RT   "characterization of satellite dna in trypanosoma brucei and
RT   trypanosoma cruzi";
RL   J. Mol. Biol. 167, 1-21 (1983)
XX
DR   GENBANK; K00393; 77.0.
CC   Positions       1     196  Accession No K00393        GenBank (rel. 77.0)
XX
SQ   Sequence 196 BP; 52 A; 52 C; 52 G; 37 T; 3 other;
     ctcgcgaaat tcctccaagc agcggatagt tcagggttgt ttggtgtcca gtgtgtgaac        60
     acgcaaacag ayattgacag agagtgcctc tgactcccrc cattcacaat cgcgaaacaa       120
     aaatttggac cacaacgtgt grtgcagcgg ccgctcgaaa acgatccgcc gagtgcagca       180
     cccgtgtggg caagag                                                       196
//
ID   TEC1      repbase; DNA; INV; 698 BP.
CC   TEC1 DNA
XX
AC   M29914;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   E.crassus Tec1 transposon-like element.
XX
KW   Repetitive sequence; transposon.
XX
OS   Euplotes crassus
CC   E.crassus micronuclear DNA, clone EC5.
OC   Eukaryota; Animalia; Protozoa; Ciliophora; Polyhymenophora;
OC   Spirotricha; Heterotrichida; Clevelandellina.
XX
RN   [1]
RP   1-698
RC   [1]  (bases 1 to 770)
RA   Jahn C.L., Krikau M.F., Shyman S.;
RT   "Developmentally coordinated en masse excision of a highly
RT   repetitive element in E.crassus";
RL   Cell 59, 1009-1018 (1989)
XX
DR   GENBANK; M29914; 77.0.
CC   Positions     725      28  Accession No M29914        GenBank (rel. 77.0)
XX
SQ   Sequence 698 BP; 235 A; 93 C; 148 G; 222 T; 0 other;
     tttgtagtac gattagagag aatttgctgg aaatgataaa gtctggcgca gacttattca        60
     ccaatgttat aaatcatgca ttagttagcc ttagcatggt ctatggatat catgtggata       120
     gtagttagtg gtctaggcta acctgcccat atggagtcca gacgatcgct acaggcttag       180
     gaggttgtcc attgaaatac ctcatattta ggattattac atgtaaatct aggataattt       240
     gctatcgaat tttcagcaaa gtcctttgta aatagagaat ttgtaaatat ccattaggct       300
     ataattcgcc aagccagttg ctctaaggca tgagattggc atagtcagat agtctgaaga       360
     gttctctaca atatagacta atatggtcat cttaaagtcg ccatgaacct ggaaggggtt       420
     ggggttgacc aaaataaagt cagcgcgcag gcaaaccaga gagctattta gaggctattt       480
     ggcataattc attagagttt ggtaatattt tgaggatagt aaagggttta aaaagacaaa       540
     ttaagtgatg atcataagga tgcaaaatga aagcttgttt atgtggaaac ttaataaggt       600
     gagaaaggta gatagaaaga gtattattta agattaaatt gttcaattat taattataat       660
     tattaattta tattgtttca atataaaact ccctctat                               698
//
ID   TEC2      repbase; DNA; INV; 5328 BP.
CC   TEC2 DNA
XX
AC   L03360;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Euplotes crassus transposon-like element Tec2-1.
XX
KW   Transposase.
XX
OS   Euplotes crassus
CC   Euplotes crassus DNA.
OC   Eukaryota; Animalia; Protozoa; Ciliophora; Spirotrichea;
OC   Hypotrichia; Euplotida; Euplotina; Euplotidae.
XX
RN   [1]
RP   1-5328
RC   [1]  (bases 1 to 5328)
RA   Jahn C.L., Doktor S.Z., Frels J.S., Jaraczewski J.W.,
RA   Krikau M.F.;
RT   "Structures of the Euplotes crassus Tec1 and Tec2 elements:
RT   identification of putative transposase coding regions";
RL   Gene 133 (1), 71-78 (1993)
RX   MEDLINE; 94040798.
XX
DR   GENBANK; L03360; 89.0.
CC   Positions       1    5328  Accession No L03360        GenBank (rel. 89.0)
XX
SQ   Sequence 5328 BP; 1787 A; 894 C; 986 G; 1661 T; 0 other;
     tagagggata aaaatattga aacaaattaa ttaataatta taattataaa tattgaaaaa        60
     ttatttcctc ggctatcctt tcttacttcc tctctttccc tcctaactag tctctattac       120
     caaatgtgat gatattaact ataatcatgt ctaatatctg cttaaattca gtctatattc       180
     taaacattat ccattcttct aaatgcctaa attctagtca aactataagg aaatatcaca       240
     tttagtgtct aaatttctca ctggttccgt gcggcgctgg ttaatttgct ctcaccccag       300
     accccctaca atagggggtc ataaagacgc caccaacttc attttagagg ctttagtatc       360
     ctctgaatat ggtcttagat cctatgtcta gcaccttcat tggatacaag accaagtcta       420
     tatcattttg aggacttaga gcaaattttg attctaatct taaatttaat cattaaattg       480
     atcaaagtct gtcataaaat ggtgagtcta gtggaatttc aacatatcct aaatactaag       540
     gcataactag ttaggagctg tcggttgcag aagggtcttg acctctccag tacaacaggc       600
     tgacaccatt aggcatctgc tccatcggtt atctttcgat tttcagagga attgctagag       660
     tctagagtgg actctagcat ttctactaaa ccagagatat tctagcagat ttagtaaaaa       720
     tttagcaatt ctattaatat gaatgttaat cattaactat accctactga ttgccatttt       780
     gatgttgtgc agaaactcct tgttagccag gttctctctg cttaagttcc tcttcaaggt       840
     tccaaatgta tgctcaatct tgttcagttc tggagaatat ggaggaattg taaatcagac       900
     catcttcatc ccagtaattg ccttgacaac cttctcagta gaatgtattg atgcattatc       960
     aaacacatat acagtcctct tcattagctg cttctttgct atcattgtct ttaagagact      1020
     gttcagcttt tctaagaatg taatgaaatt ttggtctttg gtggtctcag ttttgatatg      1080
     gaagatctta tgctgttcga cttgagctgc tattcagtta aatctctgat tagtgcttct      1140
     aataagtttg acaggctcat ctccaatctt attccatgta tataaaggta aggctgatgc      1200
     attaaatgag cattcatcaa tatacacaat agtgtagtgt cacttctcca ataacctaat      1260
     gaagctctta aagatctcct tatcatcctt aagatgtgat cggagtgaac taggaggtct      1320
     tgtattagat ctctgccaag aatatcctaa tgtattcttc aaacaactcc tgacttcatc      1380
     atagctgtaa gatggaatgt cctcattctc cttagatttc gaattagcaa aatcctttat      1440
     gctcttcaca gtcacacatc ttcccttctt gtttgcaata tatatttcaa agagcctttt      1500
     gagattgcat agcctatcta ccttatctct cttcttctga agtgatttag cttcatttag      1560
     tttcttccat ctgaaatatt tatcaattca gatctttaat ctcttcaatg gcaaacgcaa      1620
     ccatttggca acttcctcta aactttgatt gttctcaagg agcatcttct ctactattat      1680
     ccggttctga gagaacttaa tcatgtcttt gttcttgaaa ggccatgatc ttctcttaag      1740
     ctttactcct ttctgaataa atgcctcata atattccaaa gtgactatga tttcctcatc      1800
     ttgattatcg cttaatgatg gaaggatatc ttgctcattt ggttcctcct caattatctt      1860
     ctcatacttc tttgcctctt cttctaacat agaagtagcc tcaaccattc tccttgtact      1920
     tacttttgat aatgagagtc caataaagtc tttaagaagg aactgttttc cgctatatta      1980
     attgagaaaa tgcgccaaac tgccatttgc taatcttggt tttagcttct tcaagttcct      2040
     taactgatgc tgataatgta aaataactat accattaatg tattaggaag acagacatat      2100
     aatttcatga gcatagccta gatattcaca agtaggatat ctcatcgcgc ggacttactt      2160
     catgatcaaa tatataaatg attaaattag gattaatttc ataatattta atatggaaac      2220
     acgtaattca gcgaagaaga aagatatcaa gaccaaagac ttctttgaat atgagatgat      2280
     acctttcaaa acacatagag attcagcaat ggagaagaag agtaagaatt cttcacaagt      2340
     agaaagcttc ttgaaggata atgaagatga taaatcagaa gatcttggac atggaaatag      2400
     ccagacagag cagggagaaa tcatggctgt caaagattct attatggatg tgaatcaggt      2460
     tctactttca caaatcctta atgcagtgaa taagaaggtt gaagtagtcc tgcctcaaga      2520
     tcatatgaac atgatgcaga agatcctcag cacattagaa agaattgagc agaagattga      2580
     tggcaggcac acttctgctc ccaaccaaca tgtattggag cctaactctc ctatacttga      2640
     aaacgataac tctgatccgc ttggcgatat tcctcctgac catgaggtca tactagagcc      2700
     agagattgta ttcccgtatg agctattctt gagagataag ttcctgttgc taccaaacaa      2760
     gaaatagaaa gctatacaat aaatataaga gagagtgagg aggaaatgat ccagttgctt      2820
     tctatatttt cagatctgga atatctctgg attcaacaag gagagactgt ggtagaatat      2880
     ttgcaaattt tcaaaagcaa gatgtaggat tggatcataa tgatgttttt gattacttca      2940
     agtttctaga tgaagagcaa attaagaaca agaatacaat caagaaggag tatggactaa      3000
     tcagaagaat cttaaatgtt tcctatgcag tagacaagac caagtttcca agagccaact      3060
     ttaagagtaa gaagagacta aaatcagtca ataagaatcc agcattaagt aggaaacttt      3120
     tgctagaaat ctgtaatgag ctgtatgcca aggattataa gatggaggca ttagtggttc      3180
     accttatgtt tgcttgtgca ttaagagctg atgaggttag atttttgatg tttaacaaca      3240
     taaagaagga tagaatagga acatctatcg taatttatag gtcaaaaact gaagaagagc      3300
     agacattggc tattgatcaa gatcttgaag atcgtattga agaatacaag cagatattga      3360
     tcaaagccgg taaatatatt gaagagacca gatatacaac aagaggtgaa cagaagagag      3420
     gcatattcat atttaaggat tcgtacattt gggtttatag actattcatc aagagattca      3480
     aggaaatatt aggagatgat tttggaatca ctccagctat aatgagaagc tctgctatca      3540
     gtgatacaac aggagaagga aacattatac aagctgctag acttgccaat cataaggata      3600
     tgagaatcac tagaaagcat tatcttgctg ctcagaaacc atttgaagtt ggaagagaag      3660
     agagaaaaga ataagcctaa tttgttgata aatattaaag attaaatttt atttgtaatt      3720
     ttattttggg aagatgtcta aagctttatc agaccagact aagtttgtga agattagaag      3780
     agaggaactt gaatcaaaga tccgcagaaa ggaagactta gagaacattt ttaagaattg      3840
     ctgtaagaca tcatatcagc atctaggtca atattatcta cctcataaaa gtcactgccc      3900
     aattaggttt ctgagagatg tattttcagg cagaaagaag gtattccata agtcttaatg      3960
     aatataggca attaagcaaa gggacttgaa gcctattgtc gttcctcaat atgaggagtt      4020
     atctcctaag aagatatatg agaagattaa gaagcattgt ccagagatca tcctgtatct      4080
     tcctgactat ttagagaagg atgactatac tcctcccaag aagttcatgt gggatgtatt      4140
     ttccacattg gattctgatc ttgcttttca gtttgtcaag tttgctattg atcaaagagc      4200
     agaagaagag aacgaaggag acaagaccat cgaaatagat gaagatgttc tcagagatat      4260
     gaaatctgtc aaatatttct cgaagaagaa aggcaaggca ttgtatatgc tcaaagccaa      4320
     taaggattat actacagtca agagaaagag aagaagagag ttcactacct ttgacccaga      4380
     taacaaggag gaggagaaag agtatcatgg caagagagtt aagagacagg aaactgaaaa      4440
     tgtcatgata tctaatccat tcaagaagaa aagaaatgta ttcttggatg agaaggaggt      4500
     gagaattagt agaaggaatt cagatgagag tgacatgagg atcgatgtac ctaagaaggg      4560
     agctatgaca cctaatcctt ttagtcataa agattctgaa tatttaaatt tttactaaat      4620
     ctgctagaat atctctggtt tagtagaaat gctagagtcc actctagact ctagcaattc      4680
     ctctgaaaat cgaaagataa ccgatggagc agatgcctaa tggtgtcagc ctgttgtact      4740
     ggagaggtca agacccttct gcaaccgaca gctcctaact agttatgcct tagtatttag      4800
     gatatgttga aattccacta gactcaccat tttatgacag actttgatca atttaatgat      4860
     taaatttaag attagaatca aaatttgctc taagtcctca aaatgatata gacttggtct      4920
     tgtatccaat gaaggtgcta gacataggat ctaagaccat attcagagga tactaaagcc      4980
     tctaaaatga agttggtggc gtctttatga ccccctattg tagggggtct ggggtgagag      5040
     caaattaacc agcgccgcac ggaaccagtg agaaatttag acactaaatg tgatatttcc      5100
     ttatagtttg actagaattt aggcatttag aagaatggat aatgtttaga atatagactg      5160
     aatttaagca gatattagac atgattatag ttaatatcat cacatttggt aatagagact      5220
     agttaggagg gaaagagagg aagtaagaaa ggatagccga ggaaataatt tttcaatatt      5280
     tataattata attattaatt aatttgtttc aatattttta tccctcta                   5328
//
ID   TECTH1    repbase; DNA; INV; 1649 BP.
CC   TECTH1 DNA
XX
AC   X17627;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   C. thummi DNA transposable element TECth1.
XX
KW   Repetitive sequence; transposable element.
XX
OS   Chironomus thummi (midge)
CC   midge
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Chironomidae.
XX
RN   [1]
RP   1-1649
RC   [1]  (bases 1 to 3401)
RA   Wobus U.;
RT   "Direct Submission";
RL   Submitted (20-NOV-1989) Wobus U., Zentralinstitut fuer Genetik und
RL   Kulturpflanzenforschung d.ADW, Gatersleben, DDR-4325, Germany.
XX
RN   [2]
RP   1-1649
RC   [2]  (bases 849 to 2589)
RA   Wobus U., Baeumlein H., Bogachev S.S., Borisevich I.V., Panitz R.,
RA   Kolesnikov N.N.;
RT   "A new transposable element in Chironomus thummi";
RL   Mol. Gen. Genet. 222, 311-316 (1990)
XX
DR   GENBANK; X17627; 77.0.
CC   Positions     889    2537  Accession No X17627        GenBank (rel. 77.0)
XX
SQ   Sequence 1649 BP; 599 A; 233 C; 160 G; 657 T; 0 other;
     caaggccata gaactccttg cactatgtct acaatcacta cttttttact caactttata        60
     aatttttact tatgtttcag tacacttact atacaatgta tcacaatcac tgcaattact       120
     aaactttact gcacttaact cttttttact actctttact ttacttaagt acattaacct       180
     atactttact acactttcct ttactttact ttactttagt atacttaagt acattttgct       240
     taactttact accctttact acactttatg cactttactc gtacttttct gtactttatt       300
     tttaatcaaa ttaattagtg cataatttca atctaaatag ttataggcct cttaaacatg       360
     tggtccatta atacgttgta atcatacttt caaaaaacaa aaaataaaat aaaagatttt       420
     gcaatcatta taaaaattta aaagaaaatg tttaaaaact taactaaagg ttatagaatt       480
     taaaatatta tttttttatt tttttattat tctatcattt taaaccatat ttagctgatg       540
     gaaaagaaag agcttacaaa aacataaagc actaatgcta ctaaggcaga aatagtttca       600
     ttcatgtcaa agaaatttct aattgatacc tttagtttgt aaggaaattt gtcaaaaata       660
     aaataaaagt atagtataga aaaatcgaaa aatttaaaaa aaaatctaaa atgttgtgct       720
     tttgttttta aaaatgagta attttaattg aaaaaatttt taaaaaatta tgaaaaattt       780
     taattcgaat tgactcgaat ttgatttttt cacgtaagct tatattaaaa aaactaatga       840
     ggacgatttg tgttaagttt aaatttttaa aaaaagctat aaatacaagc ttcatataaa       900
     ttagtttcaa tttatttgca tttcgaaatt gaatgaaggg actgtagaaa aacaatattt       960
     taaatttatt ttgtaataat atgttggctt tttatttcaa caagattaac tttccaaaaa      1020
     aaacttttta aaaatatata tcaaaagtgt tgataacatt taattttttc taaaaccaac      1080
     aatatcaaaa acattgattc tcactattct ttcgttacta ttcttcgtaa ttaggaaggc      1140
     atccttaatg ttgaaatatt tgaatttagt tcaatagttt tattttttac atgagaaaag      1200
     cttcatttat atttacattt taaatatatt ttatatataa aatttcaaat aataagcggt      1260
     tcttaagttg cgataatatt gactatttat aaataaattg aatggtaaaa taaacattac      1320
     ttcaaaatta attcaaaatc aactttaaac attttggttt ttaaagtttt aaacagtttt      1380
     atgttgctgc actttctata cttttactac acttgctata ctctcactat actgactata      1440
     cttttacaac actttactac acttaaacta cacttgctac acttttgcta cactttgcta      1500
     cattctacta tgctttggtt aactttgctt cactttacaa tatttaacta tactttgctc      1560
     atgttaactt aattttgcgc aatagtttgt atacgttact gcacaatgct cactcacggg      1620
     tatactattt tgggagttct atggccttg                                        1649
//
ID   TGRP1     repbase; DNA; INV; 1032 BP.
CC   TGRP1 DNA
XX
AC   M57919;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.gondii repeat region.
XX
KW   Repetitive sequence.
XX
OS   Toxoplasma gondii
CC   T.gondii DNA.
OC   Eukaryota; Animalia; Protozoa; Apicomplexa; Sporozoa; Coccidia;
OC   Eucoccidiidae; Eimeriina; Sarcocystidae.
XX
RN   [1]
RP   1-1032
RC   [1]  (bases 1 to 1032)
RA   Cristina N., Liaud M.-F., Santoro F., Oury B.,
RA   Ambroise-Thomas P.;
RT   "A family of repeated DNA sequences in Toxoplasma gondii: Cloning,
RT   sequence analysis and use in strains characterisation";
RL   Exp. Parasitol. (1990) In press
XX
DR   GENBANK; M57919; 77.0.
CC   Positions       1    1032  Accession No M57919        GenBank (rel. 77.0)
XX
SQ   Sequence 1032 BP; 247 A; 371 C; 227 G; 187 T; 0 other;
     gtcgacattc gtgccacagc gacgtcggac ctctggttgt cacctgcggc ggaacctaga        60
     catcgctaca ccgcccacac agcgcttccg acgcgagccg acaaaccctc aacacgtaac       120
     ctccatcacg tgtagtctct gcatggcctg acgtccgagt cgaaatacga gatcggcact       180
     ctcattctcg ctcactgtcg cttcctgtca acgagcagcc acgccggaaa accacctgcc       240
     aatccacaca gcgaagactt ctcacccggc cctctatcca ccacccccca cgacctcatc       300
     ccaccccgca acctgtggtg tcgccaaacg caacacgtcg gcagctcgtg ccaaagtgcc       360
     gaagacctct tggaggtggc cgctccgcaa actaaacatg gacatgccgc cggacagtgc       420
     ctccgctgcc acctaacaac acctcctcgc ggtcactcca tcagcagtcg cctcggtgca       480
     tcgtggtgcc gcagttgcct cgagacacag aaccacgccg cgagtccgtt tctcttctta       540
     cctccaggtt ctgaacagaa cgcccagcaa tctcgcagac agactgcaca acgacacaca       600
     accaataact tctcacccat ccgcgcaggt acgcgacgaa actcatacgg gaaaaaggca       660
     ggaccgtgtg gggctgccac acgccacaag cggcgtattc cgaaacgagt gaactcggat       720
     cgttcgcttc cgcaactgga ttggcccacg catcccacgc cggacactca ctctctgcag       780
     gattccgaca acacgtcatc gaggtgcggg aacaagttgt cctttctcca cggggtcgta       840
     ttcgcctctg aagataaaag atgctacatc gctctccctt atactccctt cctgtacacc       900
     gttgccacgg cgtgaaagca ctggacattg acacagcctg cagcaggcta tacagcgata       960
     atatcttaca acgcacccca gactgttaca acctcctgac atctgtggcg ccaccaaacg      1020
     caacacgtcg ac                                                          1032
//
ID   TMSATE1   repbase; DNA; INV; 142 BP.
CC   TMSATE1 DNA
XX
AC   M30656;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   T.molitor satellite repeat E1.
XX
KW   Satellite repetitive element; TMSAT1.
XX
OS   Tenebrio molitor
CC   T.molitor DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga;
OC   Tenebrionoidea; Tenebrionidae.
XX
RN   [1]
RP   1-142
RC   [1]  (bases 1 to 142)
RA   Ugarkovic D., Plohl M., Gamulin V.;
RT   "Sequence variability of satellite DNA from the mealworm Tenebrio
RT   molitor";
RL   Gene 83, 181-183 (1989)
XX
DR   GENBANK; M30656; 77.0.
CC   Positions       1     142  Accession No M30656        GenBank (rel. 77.0)
XX
SQ   Sequence 142 BP; 41 A; 26 C; 30 G; 45 T; 0 other;
     gaattctgta attcttgcgt cgttttactt cgaaatgtac aagttccacg acgaaattcc        60
     gattcgcact tagtttttcg tgattctaca cagttgcgag cgaaaaaacg tatttagagg       120
     aaagttagcg tcttggaaac ag                                                142
//
ID   TPRP1     repbase; DNA; INV; 623 BP.
CC   TPRP1 DNA
XX
AC   J03991;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.parva repetitive element.
XX
KW   Repetitive element.
XX
OS   Theileria parva
CC   T.parva (strain Muguga) piroplasm (blood) stage DNA, clone PMB3.
OC   Eukaryota; Animalia; Protozoa; Apicomplexa; Sporozoa; Coccidia;
OC   Piroplasmida; Theileriidae.
XX
RN   [1]
RP   1-623
RC   [1]  (bases 1 to 623)
RA   Allsopp B.A., Carrington M., Baylis H.A., Sohal S., Dolan T.,
RA   Iams K.P.;
RT   "Improved characterization of Theileria parva isolates using the
RT   polymerase chain reaction and oligonucleotide probes";
RL   Mol. Biochem. Parasitol. 35, 137-148 (1989)
XX
DR   GENBANK; J03991; 77.0.
CC   Positions       1     623  Accession No J03991        GenBank (rel. 77.0)
XX
SQ   Sequence 623 BP; 158 A; 131 C; 133 G; 201 T; 0 other;
     gtccttgtag gaatgggtct ggtctactgc atatatcctg ccatagctcc tggaatgatt        60
     gttccatttt acctcattga taagattgag atggttctgt tgatagctac catatttcca       120
     gctctgtatg tagcaattgc cagaagtggt aaactgatac caggttttgg tggtttcttt       180
     gatcccgtgt ctcctacatg taattgggga gccaccaata aacctgtttg gctaccaagt       240
     gatttaggca ctggatacca ctggcaccta actgacctag tgattcccac catgatcatt       300
     ttagcctatt tatttattta ctcactgcat tacagagact catcagttgc cagatcaatc       360
     atcaaccaac ccaaaatgtc tacatgtcta accattctat tctatatgtg tcatgagatc       420
     tcattggctg taggatttcc aggtatcttt ggtggtaatg gaggtggtag catcttagcc       480
     ctaacggcac agctgatagg tgcatttctg atgtgtctgt tagctccata ttctgaaggt       540
     tacattattg agtataagag acatgatcct agcaattggc ctacagcagg aatgactagg       600
     tggaatgccc ttaggtactg gac                                               623
//
ID   TSRP1     repbase; DNA; INV; 1613 BP.
CC   TSRP1 DNA
XX
AC   X06625;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   Trichinella spiralis repetitive DNA.
XX
KW   Repetitive sequence.
XX
OS   Trichinella spiralis
CC   Trichinella spiralis
OC   Eukaryota; Animalia; Eumetazoa; Nematoda; Adenophoria; Enoplida;
OC   Trichocephalida; Trichocephalatina; Trichinelloidea;
OC   Trichinellidae.
XX
RN   [1]
RP   1-1613
RC   [1]  (bases 1 to 1613)
RA   Dick T.A.;
RT   "Direct Submission";
RL   Submitted (16-JAN-1988) Dick T.A., University of Manitoba, Z320
RL   Duff Roblin Building, University of Manitoba, Wpg. Mb.,, Canada,
RL   R3T 2N2.
XX
RN   [2]
RP   1-1613
RC   [2]  (bases 1 to 1613)
RA   deVos T., Klassen G.R., Dick T.A.;
RT   "Sequence Analysis of a 1.6kb repetitive element from a porcine
RT   isolate of Trichinella spiralis";
RL   Nucleic Acids Res. 16, 3114-3114 (1988)
XX
DR   GENBANK; X06625; 77.0.
CC   Positions       1    1613  Accession No X06625        GenBank (rel. 77.0)
XX
SQ   Sequence 1613 BP; 459 A; 311 C; 277 G; 566 T; 0 other;
     gaattctgaa ttgcaggttc gatgtctgac ctttaaaaca acctcctcga tggattattc        60
     ttcatgatat tgcaacttct atgggttagc taatgtcttc tattctgcta ctgctaacac       120
     ttcgacgaat atttctttag gattcttctt gcagaacagt gcgaatcatt tgattatatc       180
     gattttaata aatgaaaagc ttgtaaagcg gtggtgcgta ttccattctt gagccacacc       240
     attaatgtga ttggctattt attttgcaac ctattttatc gaatttcatc tctcaatttt       300
     acacattcat acctatgctt ttccaccggg aatggtatta atcgcttcac cgccatgtct       360
     gtaacaccag taaatactcg tgaagctttg ctaatcattg catttcacag cgccctaacg       420
     aatatgagcg gtttgtcgat gtgtaaacta taataagggt tcttcttacc aattttccgg       480
     atttgtacct gtgtttctcc gcacacatgt ttggtaatgg ttcctctcta tggaatgtaa       540
     tactctctaa tatagtcgag cattgttaat cattccattt cagagcgctc caaggaatat       600
     acacggtcaa tcggtacaca aactctggta agcagttact cttaccaata ttgcggattt       660
     ctaccagtgt ttctccccac agatgtcagg taatgttgcc tctctatggc ctgctatact       720
     ttctaagata ggtaaacatg ttaatctttg catttcattt cagacagcac caaggaatat       780
     gagcggttgt tcggtatgca aactctggag agtaattcct gactcttcct gtgtttctac       840
     gctcagaaat cagctaatgt tcctttgtat tgtctgtaac agcagctgac atgtcaaagc       900
     catgttaatc aatttcattt tacttcacca ccaaaagcat gatcaatcat tcgttattca       960
     ccatcttgaa tgctttttcc tgcagggatc ttcggcacgt atgacttgtt attccacaga      1020
     aaataattat gatcgtatga ctgcagtgac gagaatttca gcttcactgc acagcagttg      1080
     taatacagcc tgttacattt taaaatcgac agttactacc cacttgcagt tcgttttatc      1140
     attggtaata ttacagaact tgaaaatcat taatgtctac tgtaagatta ctgtatttta      1200
     aaaatagaat tatttatgaa aaataatacc attttgtgta tttgattaaa ttgcttatag      1260
     ttgatatatt gcaattgtta cagtgtctag agtaaaaatt ccatgtaacc aaacgacagt      1320
     tttcgtttcg tttaaaatca actgtttgcg tcagatactt cgtattggat gaagattgtg      1380
     cagtttttga ttcagtcaga ttttacgctt aaatagtcac cttaattgat ttttctatag      1440
     tgtgcagttg atgcggttta aaaaaggaac cagtataata ccaaaaaaca tgatttgatc      1500
     agtatgatct gcaagaaaaa cgttgattcg tgatatgatc gttcatgtag tttgagttga      1560
     agctacttca attatcacgc agtgtatgaa cgacattccc cgcacctgaa ttc             1613
//
ID   TU1       repbase; DNA; INV; 775 BP.
CC   TU1 DNA
XX
AC   X00146;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.purpuratus transposable element TU1 fragment.
XX
KW   Transposon; repetitive element.
XX
OS   Strongylocentrotus purpuratus
CC   sea urchin
OC   Eukaryota; Animalia; Eumetazoa; Echinodermata; Echinozoa;
OC   Echinoidea; Echinacea; Echinoida; Strongylocentrotidae.
XX
RN   [1]
RP   1-775
RC   [1]  (bases 1 to 1383)
RA   Liebermann D., Hoffman-Liebermann B., Weinthal J., Childs G.,
RA   Maxson R., Mauron A., Cohen S.N., Kedes L.;
RT   "An unusual transposon with long terminal inverted repeats in the
RT   sea urchin Strongylocentrotus purpuratus";
RL   Nature 306, 342-347 (1983)
XX
DR   GENBANK; X00146; 77.0.
CC   Positions     609    1383  Accession No X00146        GenBank (rel. 77.0)
XX
SQ   Sequence 775 BP; 188 A; 231 C; 150 G; 206 T; 0 other;
     ggttccatga cacatgctcc gccgacgatt gctccgccga catttactcc gcaaaacgcg        60
     acaattgctc cgcgacattt gctccgcgac atttgctccg acgtcaaatg ctccgccgac       120
     agttgctccg ccgacagttg ctccgccgac aattgctccg ccgacaattg ctccgcctga       180
     agcgacaatt gctccgccga catttgctcc gccgacaatt gctccgccga catttgctcc       240
     gccgaagcgc acctgctccg ccgacatttg ctccgccgac aatgctccgc cgacaacgct       300
     ccgcctgaag cgacaatgct ccgccgactg ctccgcctga agcgacaatg ctccgccgac       360
     attgctccgc cgacaattgc tccgacgaca tgctccgcat gaagcgacac ttgcaccggg       420
     tgacatttgc tccgcgacat ttgctccgcc caaaaagtgt cccattaaat acaaatgcta       480
     ctagtactac gacaaatgct tcgccgacaa tatttttttt tcacgggttg tttttgtttc       540
     tttctttttt tcttcatttt ttgaatgcat ttcatgacat tatgtaaatg aaatgaaatg       600
     aatgaatgtt gataatgtgg gaggaaaagc agtttgccta aaagtcattt cgaatatact       660
     gaaataactt tccatctatc actgtacgtc ccacataata aacactaaac actcattaca       720
     tgtcatggga agtttttttt tttaaagtta gagcagctaa gccacatccc ccgtg            775
//
ID   TVSAT1    repbase; DNA; INV; 174 BP.
CC   TVSAT1 DNA
XX
AC   J03989;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   T.vivax satellite repeat DNA.
XX
KW   Satellite repetitive element; TVSAT1.
XX
OS   Trypanosoma vivax
CC   T.vivax (strain Y486) DNA, clone pDgSAT14.
OC   Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
OC   Kinetoplastida; Trypanosomatina; Trypanosomatidae.
XX
RN   [1]
RP   1-174
RC   [1]  (bases 1 to 174)
RA   Dickin S.K., Gibson W.C.;
RT   "Hybridisation with a repetitive DNA probe reveals the presence of
RT   small chromosomes in Trypanosoma vivax";
RL   Mol. Biochem. Parasitol. 33, 135-142 (1989)
XX
DR   GENBANK; J03989; 77.0.
CC   Positions       1     174  Accession No J03989        GenBank (rel. 77.0)
XX
SQ   Sequence 174 BP; 19 A; 72 C; 40 G; 43 T; 0 other;
     ccttcttcag gttggtgttc tggtggcctg ttgcccccca cccgctccca gaccatatgg        60
     tcctgagtgc tccatgtgcc acgttggcac gctccactgt ctagcgtgac gcgatggccc       120
     gtgcactgtc ccgcacccct tccccactcc ctcttgcacc tctcgctccg gcca             174
//
ID   W1        repbase; DNA; INV; 482 BP.
CC   W1 DNA
XX
AC   J04665;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   S.mansoni female-specific DNA repeat W1.
XX
KW   Repetitive sequence.
XX
OS   Schistosoma mansoni
CC   S.mansoni (strain Puerto Rico) DNA, clone pW1.
OC   Eukaryota; Animalia; Eumetazoa; Platyhelminthes; Trematoda;
OC   Digenea; Strigeidida; Strigeata; Schistosomatoidea;
OC   Schistosomatidae.
XX
RN   [1]
RP   1-482
RC   [1]  (bases 1 to 482)
RA   Webster P., Mansour T.E., Bieber D.;
RT   "Isolation of a female-specific, highly repeated Schistosoma mansoni
RT   DNA probe and its use in an assay of cercarial sex";
RL   Mol. Biochem. Parasitol. 36, 217-222 (1989)
XX
DR   GENBANK; J04665; 77.0.
CC   Positions       1     482  Accession No J04665        GenBank (rel. 77.0)
XX
SQ   Sequence 482 BP; 130 A; 86 C; 112 G; 154 T; 0 other;
     gaattcgttc aacacagtga aattcttcct tcacacatat ctaccatcca atgtcttcgc        60
     aatattttgg agtgaaattt gcttttctca ttatattgtg catgatgact gatgtgacag       120
     gaatgaggat tatgttgata tcgtctgagt caatgagaat tgtgaatcgg atgtgcagat       180
     gagaggttgt gcatacttgt tccttgtgac acaaaggagt ggtgatgcca gttcgagtgt       240
     ttgtggatgc gatggtgttc acacgtggat tgaataagcg atgaacaaat gcgatgatgc       300
     attagggtgt gtggttgtgc tggaccaatg tgcataatgg aatcgttgct tgtgcacatg       360
     gaccaccaca aataacacac tcaattcata ctccgtccat ttaaccatgc attgctttct       420
     catcaacacc acagtttgca ttatcatttc gaacattgag ttgaatgtcg agtggtgaat       480
     tc                                                                      482
//
ID   W2        repbase; DNA; INV; 715 BP.
CC   W2 DNA
XX
AC   U10109;
XX
DT   28-SEP-1995 (Rel. 1.0, Created)
DT   28-SEP-1995 (Rel. 1.0, Last updated, Version 1)
XX
DE   W2 repeat.
XX
KW   Repetitive sequence.
XX
OS   Schistosoma mansoni
CC   blood fluke.
OC   Eukaryotae; Hyperchondria; Eukaryote crown group; Metazoa/Eumycota
OC   group; Metazoa; Eumetazoa; Bilateria; Acoelomata; Platyhelminthes;
OC   Trematoda; Digenea; Strigeidida; Schistosomatoidea;
OC   Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-715
RC   [1]  (bases 1 to 715)
RA   Drew A.C., Brindley P.J.;
RT   "Identification of female-specific genomic sequences from
RT   Schistosoma mansoni by representational difference analysis";
RL   Unpublished
XX
RN   [2]
RP   1-715
RC   [2]  (bases 1 to 715)
RA   Drew A.C.;
RT   "Direct Submission";
RL   Submitted (27-MAY-1994) Alexander C. Drew, Tropical Health Unit,
RL   Queensland Institute of Medical Research, 300 Herston Road,
RL   Herston, Brisbane, Queensland 4029, Australia
XX
DR   GENBANK; U10109; 89.0.
CC   Positions       1     715  Accession No U10109        GenBank (rel. 89.0)
XX
SQ   Sequence 715 BP; 196 A; 123 C; 200 G; 196 T; 0 other;
     aagcttgctg atgtgcagtt tgccgatgtc tattcaagtg atcaatcagt atgagtagaa        60
     gacaatcatg cacaacgatt gaacagtcaa cagctcaaat gatgagccga gtgccgagaa       120
     tcgttgcgca tttcctcaat caataaacag tgaagtgtgt tcacgaacga ttcccgttcg       180
     gttgagatcg ggaaacgctg aaattgtgtg ttatgctctt tcggacatca gtttccacgt       240
     gacattgatg aagtgagact gtgttgaggt cggtcgggtt gaaggaaatc taagtgtcgg       300
     tggaaatgca cactgtgtgt ggtaatagaa cgacgaaaat tacgaatgcg tctattgagc       360
     tatgttctgc atattggtct gaacaagtga tgatcgaagg acctgtgatt gtgcatgtgt       420
     atgagtgcat aagtcaacaa agttgataac gaacaacctg gtgaattgac cgcatctgtg       480
     tgatgtacaa ttagatgatg tagattgtgg agaggttcta ctggtgattg gttgtgacgt       540
     gtcggaagaa cgttgggtgt cagcccacga aatgtgtgta aggcgaaacg cgtacgccgt       600
     cagaacgttg ttgtggtggc ctgttttcgg acctgcatca tactcggaag atagcaaatc       660
     agttgttcat cgtagtagag gagtacacac gttggacgac caagtgcgta agctt            715
//
ID   MARINER_AM repbase; DNA; INV; 937 BP.
CC   MARINER_AM DNA
XX
AC   U19902;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Apis mellifera mariner transposon, transposase pseudogene, partial
DE   sequence.
XX
KW   DNA transposon; mariner; transposase; AMMARINER.
XX
OS   Apis mellifera (honeybee)
CC   honeybee.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Hymenoptera; Apocrita; Aculeata;
OC   Apoidea; Apidae; Apis.
XX
RN   [1]
RP   1-937
RC   [1]  (bases 1 to 1628)
RA   Ebert P.R., Hileman J.P.IV., Nguyen H.T.;
RT   "Primary sequence, copy number, and distribution of mariner
RT   transposons in the honey bee";
RL   Insect Mol. Biol. 4 (2), 69-78 (1995)
RX   MEDLINE; 96031921.
XX
RN   [2]
RP   1-937
RC   [2]  (bases 1 to 1628)
RA   Ebert P.R.;
RT   "Direct Submission";
RL   Submitted (17-JAN-1995) Paul R. Ebert, Entomology, University of
RL   California, Davis, Davis, CA 95616, USA
XX
DR   GENBANK; U19902; 93.0.
CC   Positions       1     937  Accession No U19902        GenBank (rel. 93.0)
XX
SQ   Sequence 937 BP; 335 A; 163 C; 168 G; 271 T; 0 other;
     ttgggttggc aactaagtaa ttgcggattt cagttgaagt tgatgacgat ctaatcaaag        60
     caataatcga ttcggatcgt cacagtacaa ctcgtgagat tgcagagaag cttcatgtat       120
     cacatacacg cattgaaaac cacttaaaac aacttggcta tgttcaaaaa ctcgatacat       180
     gcattcctca cgaactgaaa gaaaagcatt taatgcaacg tattaacagt tgcgatttgc       240
     taaagaaacg tagtagaaat gatccatttt taaaacgact gataactggc gatgaaaaat       300
     ggattgttta caacaatatc aagcggaaaa gatggtggag caagccacgt gaaccagctc       360
     aaacaacatt aaaaactggt attcatcaaa agaaggtttt gttatcagtt tggtgggatt       420
     acaaagaaat tgtctatttt gaactcttac cacccaaccg aacgatcaat tctgttgtct       480
     acattgaaca actaacgaaa ttaaacaatg cagttgaaga aaagcggtcc gaattgacaa       540
     atcgaaaagt tgttgtattc catcatgacg atgcaagacc acaaacatct ttggtcattc       600
     ggtaaaaatt attggagttt ggttgggatg ttttgccaca ttcactatat agtcctgacc       660
     ttgcaccatc tgattacttt ttgcttcgat ctttacaaaa ctccttgaat gataaaaatt       720
     tcaataatga tgatgatatc aaatcgtacc tgattcagtt ttttgctaat aaaaaccaga       780
     agttttatga acgtgggatt atgatgctgc ctgaaagatg gcaaaagatc attgatcaaa       840
     atgggcaaca cattacagaa aaaagttatt tagttccatg aaaaaattgt ctttgatttt       900
     ctaaaaaaaa tccgcaatta cttagttgcc aacccaa                                937
//
ID   HERMES    repbase; DNA; INV; 2749 BP.
CC   HERMES DNA
XX
AC   L34807;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   22-DEC-1995 (Rel. 2.0, Last updated, Version 1)
XX
DE   Musca domestica Hermes transposon transposase gene, complete cds.
XX
KW   Ac element; Hermes transposon; Tam3 element; hAT element family;
KW   hobo transposon; transposase.
XX
OS   Musca domestica
CC   Musca domestica (strain Maryland) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
OC   Cyclorrhapha; Schizophora; Muscoidea; Muscidae.
XX
RN   [1]
RP   1-2749
RC   [1]  (bases 1 to 2749)
RA   Warren W.D., Atkinson P.W., O'Brochta D.A.;
RT   "The Hermes transposable element from the house fly, Musca
RT   domestica, is a short inverted repeat-type element of the hobo, Ac,
RT   and Tam3 (hAT) element family";
RL   Genet. Res. 64 (2), 87-97 (1994)
RX   MEDLINE; 95113312.
XX
RN   [2]
RP   1-2749
RC   [2]  (bases 1 to 2749)
RA   Warren W.D.;
RT   "Direct Submission";
RL   Submitted (21-JUL-1994) William D. Warren, Molecular Genetic
RL   Resource Service, CAMBIA, GPO Box 3200, Canberra, ACT 2601,
RL   Australia
XX
CC     repeat_unit     1..17
CC                     /rpt_type=terminal inverted repeat
CC     CAAT_signal     354..357
CC     TATA_signal     394..399
CC     CDS             450..2288
CC                     /codon_start=1
CC                     /product="transposase"
CC     polyA_signal    2300..2305
CC     polyA_signal    2336..2341
CC     polyA_signal    2349..2354
CC     polyA_signal    2353..2358
CC     repeat_unit     2733..2749
CC                     /rpt_type=terminal inverted repeat
XX
DR   GENBANK; L34807; 94.0.
CC   Positions       1    2749  Accession No L34807       GenBank (rel. 94.0)
XX
SQ   Sequence 2749 BP; 946 A; 457 C; 502 G; 844 T; 0 other;
     cagagaacaa caacaagtgg cttattttga tacttatgcg ccacttgcta cttatgagta        60
     caattgtgct ttgccacttg aacaaaaaat tcattgattc atcgacactc gggtatgttt       120
     tgtcgtgtcg ttctgcgcac tcagttaaat tttttgtctt actctcttgc tctcagcaca       180
     tcaagtgttg ttacttgttg ttactcagtc gcctgcctta tgcttttgga gagcgaaagc       240
     acaacgatca gaacggagaa gtaacaactt gttttgctaa caagtggctt atgcacttga       300
     gtgtgtttta cacatgtttt tgagtttcac agcaaaatgt tccgatttga gcacaataat       360
     tttaccgtta ttttgagttt tttagttttg aataataaat gtgatttact gttcatcctc       420
     aaaagagttt aagcagtagt agagattaga tgcagaaaat ggacaatttg gaagtgaaag       480
     caaaaatcaa ccaaggatta tataaaatta ctccgcgaca taaaggaaca agttttattt       540
     ggaacgtttt agcggatata cagaaagaag acgatacatt ggtggaaggg tgggtgtttt       600
     gccgaaaatg cgaaaaagtt ttaaaataca caactaggca gacatcaaac ttatgtcgtc       660
     ataaatgctg tgcctctcta aagcaatccc gagaattaaa aactgtttca gctgattgca       720
     aaaaggaagc aattgaaaaa tgtgcacaat gggtggtacg agattgtcgg cctttttcgg       780
     ccgtctctgg atccggcttt atcgatatga taaaattttt tattaaagtt ggagccgaat       840
     atggtgaaca tgtcaacgtt gaggaattgt taccaagtcc aataacgcta tcgagaaagg       900
     taacttcgga tgcaaaagaa aaaaaagctc tgattagtcg agaaattaag tctgctgtag       960
     agaaagatgg tgcatcagca acgatagatt tgtggaccga taattatata aaacggaatt      1020
     ttttgggagt aacgttacac taccatgaaa acaatgaact gcgagatcta attttaggtt      1080
     taaagtcctt agattttgaa agatccacag cagaaaatat ttataagaag cttaaagcca      1140
     tttttttaca attcaacgtc gaagacttga gtagtataaa atttgtgaca gatagaggag      1200
     ccaatgtcgt aaaatcattg gcaaataata tcagaattaa ctgcagcagc catttgcttt      1260
     caaacgtgtt ggaaaattca tttgaggaga cacctgaact caatgtgcct attcttgctt      1320
     gcaaaaatat tgtaaaatat ttcaagaaag ccaatctgca gcacagactt cgaagttctt      1380
     taaaaagtga gtgccctaca cggtggaatt ccacatacac gatgcttcga tctattctcg      1440
     acaactggga aagcgtgatt caaatattaa gtgaggcggg agagacacag agaattgttc      1500
     atataaataa gtcgataatt caaacaatgg tcaacatcct cgatgggttt gaaagaattt      1560
     ttaaagaatt acaaacatgc agttcaccat ctctgtgttt tgttgtgcct tccattttaa      1620
     aagtaaaaga aatatgttca cctgacgttg gcgacgttgc agatatagca aaattgaaag      1680
     tgaacattat aaaaaatgta agaataatat gggaagaaaa tttaagcata tggcactaca      1740
     cagcattttt tttctatccg cccgccttgc atatgcaaca agagaaagtg gcacaaatta      1800
     aagaattttg cttatccaaa atggaagatt tggaattaat aaaccgcatg agttccttta      1860
     acgaattatc cgcaactcag cttaaccagt cggactccaa tagccacaac agtatagatt      1920
     taacatccca ttcaaaagac atttcaacga caagtttctt tttcccgcaa ttaactcaga      1980
     acaatagtcg tgagccacca gtgtgtccaa gcgatgaatt tgaattttat cgtaaagaaa      2040
     tagttatttt aagcgaagat tttaaagtta tggaatggtg gaatcttaat tcaaaaaagt      2100
     atcctaaact atctaaactg gctttgtcgt tattatcaat acctgcaagt agcgctgcat      2160
     cggaaaggac attttcccta gctggaaata taataactga aaagagaaac aggattgggc      2220
     aacaaactgt cgacagcttg ttatttttaa attcctttta caaaaatttt tgtaaattag      2280
     atatataatt acatttttaa ataaaaagaa tattttttat aagtttgttt gttaaaataa      2340
     aaaaaaaaaa taaataaatt ttggactgga aaaaatttaa gtttaaaaga agcatttttc      2400
     tttttttttt taatatactt atgctctttt cctagtcttg tacagaatca tatgcaatac      2460
     tacaaacaat agcacacaca cacaaccctc atgttcaatg agtatacaac acaacaagaa      2520
     gtgagtataa tttgccaatt gacaaatcgc acacgtccac ttgtgagttt gtacactttt      2580
     tactctctca tactctagcg gtgatcttaa catcaaacaa ctgttgttgt taagttgtga      2640
     aaaaatactc gtgtataaaa aaatacttgc actcaaaagg cttgacaccc aaaacacttg      2700
     tgcttatcta tgtggcttac gtttgcctgt ggcttgttga agttctctg                  2749
//
ID   R1_NV     repbase; DNA; INV; 1993 BP.
CC   R1_NV DNA
XX
AC   L00942;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Nasonia vitripennis retrotransposable element R1 reverse
DE   transcriptase gene, 3' end.
XX
KW   Retrotransposable element R1; reverse transcriptase; NVR1.
XX
OS   Nasonia vitripennis
CC   Nasonia vitripennis DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Pteromalidae.
XX
RN   [1]
RP   1-1993
RC   [1]  (bases 1 to 1993)
RA   Burke W.D., Eickbush D.G., Xiong Y., Jakubczak J.L.,
RA   Eickbush T.H.;
RT   "Sequence relationship of retrotransposable elements R1 and R2
RT   within and between divergent insect species";
RL   Mol. Biol. Evol. 10, 163-185 (1993)
RX   MEDLINE; 93196484.
XX
DR   GENBANK; L00942; 93.0.
CC   Positions       1    1993  Accession No L00942        GenBank (rel. 93.0)
XX
SQ   Sequence 1993 BP; 425 A; 403 C; 687 G; 478 T; 0 other;
     gtcgacgctt ttgctgatga cctcctgcta ctagttcagg gcaacaggag gaatgaactt        60
     gagcagtcgg cgtctgaggc actgagtgtg gtatacaggt acggtacgaa tattggtgtg       120
     gaagtgtctg actccaagac agtgtgcatg atgctgaaag gtagtttgaa tatgttgaat       180
     cgggttgtgc atgtgtcaac gaatgggatg gatgataaga ggattaggtg tgtggaccgc       240
     gtgaggtacc tgggtgtgaa tgtgggcatc ggtatggact tttcggtcca tatcgatgga       300
     atgaaaagga ggctcactac ggcgatcatg cgcctcaggg gagtcctcag aaagagctgg       360
     ggactcaagc ggggcgtagt gagtatggtg gtgaaaggcc tctttctccc ggctgttatg       420
     tatggagcga gtgtttggta cgaacagctg cataaaagaa agttgcgtgg ttctcggaga       480
     ctgagtgagg aactcgtcag ctgccagaga gtggtgttat atgcgtgcac gcgtgtgtgt       540
     agaactgtct caacggaggc gatgcaaatc ttatttgggt cgcttccgtg ggacattgag       600
     tgttttaggc gggcgaattg cacaaagtcg aaagggcctg ccatgaatga gagtgacctg       660
     gtgactgacg aggacctgta tgaattgtcg ttgcatgaat gccgtgaact ggtggaccaa       720
     cgtgcccttg cagcttggca ggaccgttgg gaagccacga gtaacgggcg tgtgacgtat       780
     gaatggatac gggacgtggg attctccggc cgctcgatga aatatttcgg agccgagcct       840
     gagggtctgc tacgtctgac gggccatggg agcatgaact cgtttctctt ctcgagaaac       900
     ctgagcaact ccccggcctg cgcgtgtgga acagagagag aggactggat acatgtgctg       960
     tgtgaatgtg acatgtatgc ggccttcagg gatcttgact ccatcggagt caggagaact      1020
     gaggtaggat gggatgtgag cggagtgctt cttgaccgtg caagtatgag tgtctgtgtg      1080
     cctttgtcga gctgcgcatt cagaatgcgt gagttgattg tacagagaat gagagagaat      1140
     gaggaaagtt agattaggat tagggttaat cttaaggggt gaggtgggta gagggtaggc      1200
     tatagagtgg aggtatagac tgctactcgg tagggtaagg gaacgttgtg ggcttggggc      1260
     cagggtaatt gcgtgtgtga gagcgtgtgg tgtgtgtgtt agatgagtgt gggaatgaat      1320
     gtgtgcgtgt tggctggcca gctgctcgct ggtcggctcc gcagggggat cccactcttg      1380
     ctcttctaat cgaggctggc ctgtgccgga ctcgttggag gaccaagaga ggcatctctg      1440
     ggttttgcga acccacggac ctgagcagcc cttccagagg cgggatggta agatcccaac      1500
     tggaaccctc accagggtta aaacggtacc atgggcgacc ggggtgcccg ctgggggaga      1560
     attgcctccc tcgcccggtc acttgggttt ggattcgtgg tggcagtggt tgaaagccca      1620
     catcgcttgg ggttagggat tggcactggg tgaaagactc cttgggtgct ctgcacatcg      1680
     gagactggaa ccctctgcca gcctcgacgt gtgagttgcg gtctcaactc ggggagcggc      1740
     ctgcttaaac cgttaggatt ggatgggtcc cggccccaac cgagggtctc caaaggtctt      1800
     accaacctgc ggaggaatcg gtagtcgcgg cttagtagag ggcctaattg gttggcaatg      1860
     tttcggcatt gccgtctaat tggtctcaaa gctattcgcg atgcgttgcc gagcgtatct      1920
     cggcccctcc gccgtggggg gccgtgtggg tgggccgaag gcaggtactg cacgttaaaa      1980
     caaagagacg atc                                                         1993
//
ID   R1_SC     repbase; DNA; INV; 3550 BP.
CC   R1_SC DNA
XX
AC   L00945;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Sciara coprophila retrotransposable element R1 reverse
DE   transcriptase gene, 3' end.
XX
KW   Retrotransposable element R1; reverse transcriptase; SCR1.
XX
OS   Sciara coprophila
CC   Sciara coprophila (library: Charon 4A (from A. Kerrebrock)) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera;
OC   Bibionoidea; Sciaridae.
XX
RN   [1]
RP   1-3550
RC   [1]  (bases 1 to 3550)
RA   Burke W.D., Eickbush D.G., Xiong Y., Jakubczak J.L.,
RA   Eickbush T.H.;
RT   "Sequence relationship of retrotransposable elements R1 and R2
RT   within and between divergent insect species";
RL   Mol. Biol. Evol. 10, 163-185 (1993)
RX   MEDLINE; 93196484.
XX
DR   GENBANK; L00945; 93.0.
CC   Positions       1    3550  Accession No L00945        GenBank (rel. 93.0)
XX
SQ   Sequence 3550 BP; 788 A; 679 C; 1128 G; 955 T; 0 other;
     ttgcgtgggg aggtaagggg actgccgtct agcttcaggg tggttactag tagaatagtt        60
     aacgatggta ttggaatcag tgcgattgtg ataaacgacc ctgaagctga tgtgcttgtc       120
     attgaggact gtaccgatga gtacggtgtg tgtgtgttga tcaaaggtgc cacatgtagc       180
     atgtacgttg tgtccgtgta ttgtagattt ggtactgccc taggaccata tctgcaatac       240
     atggaaaatg tgcgtgtgaa gtgtggtaat acctatatga tcatggggat ggacgcaaat       300
     gccgtttccc ccctctggtt cagtaagggt gagaacttgg gaaggggaag gctgaatgaa       360
     gcgaatggtc tgctgctcga ggaatggata ctcgaaggca gaatgattgt tatcaatgaa       420
     ccctcggagt ggtacacgtt tagtgggccg aatggctcta gcgacattga cgtgacactg       480
     gtaaacgaag ctggcggtag gttcgggtat gagtggtctg tgcagcctga atggggtgtt       540
     agtgaccata atctgatccg tattcgagtt agcttggacg gactagtggc tgatgcttct       600
     ccatcaccac agtctgccag gtggcagacc cgtgatacgg attggggtga atacatggga       660
     gatgtgaaag ctaaagcaga tgtgtttggc ctggcgcaat atgaaaacgt gagtgtcgat       720
     gagaaggtcg acttactcac agagtggata tacggtgcga acgactggaa catgcggagg       780
     cataccgcgg tgcgaacttt ccagaatgag tggtggtctg tcgaacttgc ggagaagagg       840
     agtgagctgc gacggcgcag gcatgccttt caacgcattc gtaatgcggg tgccgcaagt       900
     ctggcagatc ggctacaggc gtttagggat tgtaagattg agtacaagcg catgttgtgt       960
     gaagccaagc ttcggtgctg gcaggagttt gtggctagcg aatccaatga aaacccctgg      1020
     ggacgagttt ttaagctctg tcggggtagg aggaagcctg tcgatgtctg tagcgttaaa      1080
     gtcgacggtg tgtatactga tacgtgggag ggtagtgtaa atgcgatgat gaacgttttc      1140
     tttcctgcct cgatcgatga tgcgagtgag attgaccggc tgaaggcgat tgccagaccc      1200
     ttaccacctg atctggagat ggatgaagta tccgactccg tgagaaggtg taaggtgagg      1260
     aaaagcccgg ggccggatgg gattgtggga gagatggttc gtgctgtctg gggggcaatc      1320
     ccggaatata tgttctgtct gtacaagcag tgcttgctgg agagttactt tccgcagaaa      1380
     tggaaaatag cgagcttggt catcttactc aagctcttgg accggataag atctgaccca      1440
     ggctcctatc gacctatctg tttgttagat aacttgggca aggtgcttga gggtataatg      1500
     gttaagaggc tggatcaaaa gttgatggat gtggaggttt caccgtatca gttcgcgttc      1560
     acttacggca agtctactga agatgcatgg agatgcgttc agcggcatgt tgaatgctcg      1620
     gagatgaagt acgttattgg gctgaatatc gactttcaag gtgcgtttga caatcttggc      1680
     tggctttcca tgcttctgaa gttagatgag gctcagagta atgagtttgg tttgtggatg      1740
     agttactttg gtggtcgtaa ggtctactat gttggtaaga ctggcatcgt tcggaaagat      1800
     gtgactcgtg ggtgtcctca gggatctaag agtggaccgg cgatgtggaa gcttgtaatg      1860
     aatgaactct tgctggcact cgtggcagct ggattcttca ttgtagcttt tgccgacgac      1920
     ggtaccattg ttattggggc taatagtcga tcggcgttgg aggagctggg cacgcggtgc      1980
     ttgcagttgt gtcatgagtg ggggaagagg gtgtgtgttc cggtgtcggc gggcaagaca      2040
     acgtgtatcc ttatgaaggg tcacttgtcg gccaaccggc ctccgtgcat acggctgaac      2100
     ggcacctcca tctcctacaa gagtgaggtg aagcacctgg gaatcttcgt tgctgagcgt      2160
     atgaatttta ggccgcactt cgtttacctc cggggtaaga ttcttggtct tgttgggtgt      2220
     ttgcgtcgtg tgatgaggaa gtcgtggggc ctggggcgta gggcaacttg tattctgtac      2280
     aaggggctct tcgtggcgtg tatgtcgtat ggtgcaagcg tgtggttccg gactctgcgc      2340
     ttttcgtatg cgtctatctt gctgaataga tgtcaaaggc tagtcctgta tgcatctcta      2400
     aacgtgtgtc ggacggtttc cacagagcga atgcaagttc tccacggaga actaccatgg      2460
     gatttggagg caacccgtag aggcttactc tccgaattcc gtaaaggcat tacgccggtg      2520
     gatggcgatc cgatcacgga tgaagagatg ctagggttga gtggttctca gttcaaggaa      2580
     ctgttgatgg agaggttgct ggatgtgtgg cagggcaggt gggatgtctc ggaaaaggga      2640
     cgcctcactc atgagtttat tccgagtgtc cgatttgttc gtgagaatga gtggatggcc      2700
     tttggactgt gtcttggtta tgtattaacg ggacacggta gcatgaatgg ttttctgcac      2760
     aaacgtggtc tgtcaaatac gccggtatgc atgtgtggag cacctaacga ggacgtcaag      2820
     cacctactcg gggagtgccc gctctacgag gatcttcgtg atctgaatgg ttgtgggtta      2880
     ctcattcgta acggatcgct tgacgttagc ggggcactca gcgagattgg agcgtttgaa      2940
     aagttgaatc agtttgcggt atcgctattc ggcaggaggt cgaggttgat gagagggatg      3000
     aggatccgtg aatgatgcat gtgtacgccg ttatgtcttg aatgtggttg attgtgggga      3060
     gaatgaccgg cgcaggatga gttcagctgg ttgaacggct aaggccaatt ccagactgtc      3120
     tctcggagag tgcggactcc gcgcaattcg agctagtcga tcggagctgg aagttcatgc      3180
     ttccatccga agtggtcttc gataccacct accctacccg agggttaaat cggtaccacg      3240
     ggtgttggga gcccaccagg attgcactat cctcctggtc ccaactatgg ttgaggagcc      3300
     tatccttggc tgaaacgtgg tggctgtggt tcaagtgcgt ttaatacgct ggggtactgc      3360
     tcccgggtga attgcagtaa gggttgtgat aggcccttgc cctcctttgg ctatctggtg      3420
     catgaaacac cggcatataa aggtagtcat ttgacgcgct gattgagcgt atctcaatct      3480
     gctcctctta gagaggacga gatgttatgc cttcgggtgg gtaattctcg ttaatataaa      3540
     gatattattc                                                             3550
//
ID   R2_NV     repbase; DNA; INV; 2884 BP.
CC   R2_NV DNA
XX
AC   L00950;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Nasonia vitripennis retrotransposable element R2 reverse
DE   transcriptase gene sequence.
XX
KW   Retrotransposable element R2; reverse transcriptase; NVR2.
XX
OS   Nasonia vitripennis
CC   Nasonia vitripennis (library: Charon 35 (from W. Burke)) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita;
OC   Parasitica; Chalcidoidea; Pteromalidae.
XX
RN   [1]
RP   1-2884
RC   [1]  (bases 1 to 2884)
RA   Burke W.D., Eickbush D.G., Xiong Y., Jakubczak J.L.,
RA   Eickbush T.H.;
RT   "Sequence relationship of retrotransposable elements R1 and R2
RT   within and between divergent insect species";
RL   Mol. Biol. Evol. 10, 163-185 (1993)
RX   MEDLINE; 93196484.
XX
DR   GENBANK; L00950; 93.0.
CC   Positions       1    2884  Accession No L00950        GenBank (rel. 93.0)
XX
SQ   Sequence 2884 BP; 944 A; 659 C; 764 G; 517 T; 0 other;
     aaccaaatta aaaagtcaaa cacatccact ggcgcacgca tacctaaagc tatgacaaac        60
     cctgcggaca atttcgcagg gggccagtgg aaaccacccg ggcgaagatc tgcccggact       120
     agcgcgacag gcatgtttgt ctgcgaacac tgcctaagag cgttcaccac caacacggga       180
     agaggactac atataaagag agcccacgaa gaacaagcaa acgaagcaat aacaacagaa       240
     agaagcaggg caaggtggac caacgaagaa atggaagcgg tgcaagctga aattgactgc       300
     gaggggagaa cggctatcaa ccaggagatc ctaaggataa taccctacca gaggaccatc       360
     gatgccataa aatgcctaag gaaacaacag aaatacaaga ccattaggga aagagtcgca       420
     aacagaagag cggaaaacag agccagggag actgagctga caagactgga aacagcagat       480
     gaagacccag caagccagga gcaggacaat ccaaatatgt ccctgaagaa ttggctgaaa       540
     gaagtcattg agagcgacga tgacaggttg tgcgcggacc tgcggacagc catagaaatg       600
     gcactagcag gtcagtcacc acttgatgtc tgcaccgttg gctgctatca atacacaatg       660
     acgaatctgc cactggtacc agtgcgactg ggaggaccca tctactggtg caacgcccaa       720
     agccgcagca atccaggaga aacgcaaaga aggcagacta taaaagaatc caacaactct       780
     tggaagaaga acatgagcaa agcagcccac atagtacttg acggagacac tgacgcgtgt       840
     ccagctggtc ttgaaggaac agaagcatct ggtgcgatta tgagggcagg ctgtccaaca       900
     acacgacact tgcgatcaag gatgcaaggt gaaattaaga acttatggag gccaataagt       960
     aatgatgaaa tcaaggaggt tgaagcctgc aagcggactg cggctggtcc tgacggaatg      1020
     acaacgacag catggaacag catagatgag tgcataaaaa gcctttttaa catgataatg      1080
     taccatgggc aatgccccag gagatatctt gactcaagaa ctgtactcat cccaaaggag      1140
     cctggaacaa tggacccagc atgctttagg ccgctgtcca ttgcatcagt tgcactgcga      1200
     cacttccaca gaatactggc aaatagaata ggtgagcatg gactcctcga cacaagacaa      1260
     agagcgttca ttgtggctga cggtgttgcg gaaaacactt cgctactatc ggccatgatc      1320
     aaagaggcca gaatgaagat aaaaggctta tacatcgcta tactcgacgt aaagaaagcg      1380
     tttgactccg tagagcacag gtcaatctta gatgccctga gaagaaagaa actaccactt      1440
     gaaatgagga actacatcat gtgggtgtac agaaactcca aaaccaggct ggaagtagta      1500
     aaaacgaagg gcagatggat tcgcccggcg aggggagtga gacagggtga cccgctctcg      1560
     ccactcctgt tcaactgcgt gatggatgct gtccttcgga ggctgccaga gaatacaggc      1620
     ttcttgatgg gtgcagaaaa gattggtgct ctcgtcttcg cggacgacct ggttctcctt      1680
     gcagagacga gagagggtct gcaggcgtct ctaagtagga ttgaggctgg actacaggag      1740
     caaggcctag aaatgatgcc aaggaaatgc cacactcttg cgctggtgcc gtccggaaaa      1800
     gagaaaaaga taaaggttga aacgcataaa ccgtttactg taggcaacca ggaaataacg      1860
     cagcttggac atgcggacca gtggaagtat ctaggtgtgg tgtacaactc ctacggacca      1920
     attcaggtta agatcaacat cgcgggtgac cttcagagag taactgctgc cccactaaag      1980
     ccacagcaga gaatggctat cctgggtatg ttcctgatac ccagatttat acacaaactc      2040
     gtgcttggca ggacatcaaa tgcggacgtg cgtaaaggag acaagatcat taggaagacc      2100
     gtcagagggt ggctcagact gccacatgat actccgatcg ggtacttcca cgcgccgatt      2160
     aaggaaggtg gtttgggcat tccagcgttt gagtccagga ttccagagct tctaaaatca      2220
     agaatagaag cacttggagc atccaacatg caaactgcaa gaagccttct tgggggcgac      2280
     tgggtggccg aaaggaagaa gtggatcaac acccagaaaa tcaagaactc ggaatgggct      2340
     cagaaactac acctaacaac ggatggcaaa gacctacggg acaccaggaa agcagaggcg      2400
     tcatacagtt ggataaggga catacatgtt gctataccag ctagcgtctg gataaagtac      2460
     caccacacca gaatcaacgc acttcccaca ctgatgagaa tgagcagagg cagacgaaca      2520
     aatggaaatg ctctgtgcag agccggatgt ggacttccgg agaccctcta ccacgttgtt      2580
     caacagtgcc cccgcaccca tggaggaaga gtattacgtc atgacaaaat agctgagcaa      2640
     gtagccatct tcatgcaaga gaaaggttgg ctggtgctaa gagaggcaca cattagaact      2700
     tcagtgggac taagaaagcc agacattatt gcacgaaaag gacaggattg taaaatcatc      2760
     gactgccaaa tcgttacaac ggggaatgat atacggatac aacatgagag gaaaattcag      2820
     tattacgcca gcaactggga gctgcgaaga tcagcagcaa ccatgatcca agcttgggct      2880
     gcag                                                                   2884
//
ID   R2_BM     repbase; DNA; INV; 4212 BP.
CC   R2_BM DNA
XX
AC   M16558;
XX
DT   01-MAY-1996 (Rel. 2.1, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Bombyx mori rDNA insertion element R2 (typeII), complete cds.
XX
KW   Insertion sequence; retrotransposon; reverse transcriptase;
KW   transposon; BMR2.
XX
OS   Bombyx mori
CC   Bombyx mori (clone:  B[131,98,74,701-703,108].) DNA.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Lepidoptera; Bombycoidea;
OC   Bombycidae; Bombyx.
XX
RN   [1]
RP   1-4212
RC   [1]  (bases 1 to 4400)
RA   Burke W.D., Calalang C.C., Eickbush T.H.;
RT   "The site-specific ribosomal insertion element type II of Bombyx
RT   mori (R2Bm) contains the coding sequence for a reverse
RT   transcriptase-like enzyme";
RL   Mol. Cell. Biol. 7 (6), 2221-2230 (1987)
RX   MEDLINE; 87257937.
XX
DR   GENBANK; M16558; 93.0.
CC   Positions      64    4275  Accession No M16558        GenBank (rel. 93.0)
XX
SQ   Sequence 4212 BP; 925 A; 1083 C; 1325 G; 879 T; 0 other;
     cgggagtaac tatgactctc ttaggggcga tacgcataat tttaattttt cgattcaaat        60
     ccagtcgtct taatctggtg accagtggcg cggtcaccag tatagtgcac aggacgtgaa       120
     tggctccgag gctggcggag tcactcacta taagtgtgag agacgatgtc ctgtgccaag       180
     tatacgtcca accctaacgg gttaagtgaa attagttgct cataacaggg acggtgtacc       240
     tgtttgctcg tggctggcta tcgaatggac gggaccaata cacccccctg ttagtaatgg       300
     ggtaagagag agcggtctga aactatggcc gagatcacga cgccccactc ctacccataa       360
     cctgcacgtg gtaccgccgc acattgaccg atacgggagg aggggcagca cttgaatcac       420
     gtagtcttgg tgtagccatt gcgggactac agccctcgta agtgccgcct tagaacgcaa       480
     cggggcaata ggtgggccgg ggcgctagcg ggggggagta atctcccctg ttggcgtgca       540
     ccgcactgct ccctctgggg gcagtgtcat ccggaaacag gtgggccggg gcgccaccag       600
     gggggagcaa tccctcctga tgatggcgag caccgcactg tcccttatgg gacggtgtaa       660
     cccggatggc tgtacacgtg gtaaacacgt gacagcagcc ccgatggacg gaccgcgagg       720
     accgtcaagc ctagcaggta ccttcgggtg gggccttgcg atacctgcgg gcgaaccctg       780
     tggtcgggtt tgcagcccgg ccacagtggg tttttttcct gttgcaaaaa agtcaaataa       840
     agaaaataga cctgaagcct ctggcctccc gctggagtca gagaggacag gcgataaccc       900
     gactgtgcgg ggttccgccg gcgcagatcc tgtgggtcag gatgcgcctg gttggacctg       960
     ccagttctgc gaacgaacct tttcgaccaa caggggtttg ggtgtccaca agcgtagagc      1020
     ccaccctgtt gagaccaata cggatgccgc tccgatgatg gtgaagcggc ggtggcatgg      1080
     cgaggaaatc gacctcctcg ctcgcaccga ggccaggttg ctcgctgagc ggggtcagtg      1140
     ctcgggtgga gacctctttg gcgcgcttcc agggtttgga agaactctgg aagcgattaa      1200
     gggacaacgg cggagggagc cttatcgggc attggtgcaa gcgcaccttg cccgatttgg      1260
     ttcccagccg ggtccctcgt cgggggggtg ctcggccgag cctgacttcc ggcgggcttc      1320
     tggagctgag gaagcgggcg aggaacgatg cgccgaagac gccgctgcct atgatccatc      1380
     cgcagtcggt cagatgtcgc ccgatgccgc tcgggttctc tccgaactcc ttgagggtgc      1440
     ggggagaaga cgagcgtgca gggctatgag acccaagact gcagggcggc gaaacgattt      1500
     gcacgatgat cggacagcta gtgcccacaa aaccagtaga caaaagcgca gggcagagta      1560
     cgcgcgtgtg caggaactgt acaagaagtg tcgcagcaga gcagcagctg aggtgatcga      1620
     tggcgcgtgt gggggtgtcg gacactcgct cgaggagatg gagacctatt ggcgacctat      1680
     cctcgagaga gtgtccgatg cacctgggcc tacaccggaa gctcttcacg ccctagggcg      1740
     tgcggagtgg cacgggggca atcgcgacta cacccagctg tggaagccga tctcggtgga      1800
     agagatcaag gcctcccgct ttgactggcg aacttcgccg ggcccggacg gtatacgttc      1860
     gggtcagtgg cgtgcggttc ctgtgcactt gaaggcggaa atgttcaatg catggatggc      1920
     acgaggcgaa atacccgaaa ttctacggca gtgccgaacc gtctttgtac ctaaggtgga      1980
     gagaccaggt ggaccggggg aatatcgacc gatctcgatc gcgtcgattc ccctgagaca      2040
     ctttcactcc atcttggccc ggaggctgtt ggcttgctgc ccccctgatg cacgacagcg      2100
     cggatttatc tgcgccgacg gtacgctgga gaattccgca gtactggacg cggtgcttgg      2160
     ggatagcagg aagaagctgc gggaatgtca cgtggcggtg ctagacttcg ccaaggcatt      2220
     tgacacagtg tctcacgagg cacttgtcga attgctgagg ttgaggggca tgcccgaaca      2280
     gttctgcggc tacattgctc acctatacga tacggcgtcc accaccttag ccgtgaacaa      2340
     tgaaatgagc agccctgtaa aagtgggacg aggggttcgt caaggggacc ctctgtcgcc      2400
     gatactcttc aacgtggtga tggacctcat cctggcttcc ctgccggaga gggtcgggta      2460
     taggttggag atggaactcg tgtccgctct ggcctatgct gacgacctag tcctgcttgc      2520
     ggggtcgaag gtagggatgc aggagtccat ctctgctgtg gactgtgtcg gtaggcagat      2580
     gggcctacgc ctgaattgca ggaaaagcgc ggttctgtct atgataccgg atggccaccg      2640
     caagaagcat cactacctga ctgagcgaac cttcaatatt ggaggtaagc cgctcaggca      2700
     ggtgagttgt gttgagcggt ggcgatatct tggtgtcgat tttgaggcct ctggatgcgt      2760
     gacattagag catagtatca gtagtgctct gaataacatc tcaagggcac ctctcaaacc      2820
     ccaacagagg ttggagattt tgagagctca tctgattccg agattccagc acggttttgt      2880
     gcttggaaac atctcggatg accgattgag aatgctcgat gtccaaatcc ggaaagcagt      2940
     cggacagtgg ctaaggctac cggcggatgt gcccaaggca tattatcacg ccgcagttca      3000
     ggacggcggc ttagcgatcc catcggtgcg agcgaccatc ccggacctca ttgtgaggcg      3060
     tttcgggggg ctcgactcgt caccatggtc agtggcaaga gccgccgcca aatctgataa      3120
     gattcgtaag aaactgcggt gggcctggaa acagctccgc aggttcagcc gtgttgactc      3180
     cacaacgcaa cgaccatctg tgcgcttgtt ttggcgagaa catctgcatg catctgttga      3240
     tggacgcgaa cttcgcgaat ccacacgcac cccgacatcc acaaagtgga ttagggagcg      3300
     atgcgcgcag ataaccggac gggacttcgt gcagttcgtg cacactcata tcaacgccct      3360
     cccatcccgc attcgcggat cgagagggcg tagaggtggg ggtgagtctt cgttgacctg      3420
     ccgtgctggt tgcaaggtta gggagacgac ggctcacatc ctacaacagt gtcacagaac      3480
     acacggcggc cggattctac gacacaacaa gattgtatct ttcgtggcga aagccatgga      3540
     agagaacaag tggacggttg agctggagcc gaggctacga acatcggttg gtctccgtaa      3600
     gccggatatt atcgcctcca gggatggtgt cggagtgatc gtggacgtgc aggtggtctc      3660
     gggccagcga tcgcttgacg agctccaccg tgagaaacgt aataaatacg ggaatcacgg      3720
     ggagctggtt gagttggtcg caggtagact aggacttccg aaagctgagt gcgtgcgagc      3780
     cacttcgtgc acgatatctt ggaggggagt atggagcctg acttcttata aggagttaag      3840
     gtccataatc gggcttcggg aaccgacact acaaatcgtt ccgatactgg cgttgagagg      3900
     ttcacacatg aactggacca ggttcaatca gatgacgtcc gtcatggggg gcggcgttgg      3960
     ttgagccttg cacagtagtc cagcggtaag ggtgtagatc aggcccgtct gtttctcccc      4020
     cggagctcgc tcccttggct tcccttatat attttaacat cagaaacaga cattaaacat      4080
     ctactgatcc aatttcgccg gcgtacggcc acgatcggga gggtgggaat ctcgggggtc      4140
     ttccgatcct aatccatgat gattacgacc tgagtcacta aagacgatgg catgatgatc      4200
     cggcgatgaa aa                                                          4212
//
ID   T1_AG     repbase; DNA; INV; 4634 BP.
CC   T1_AG DNA
XX
AC   M93689;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Anopheles gambiae T1 retroposon.
XX
KW   Transpsoson; retroposon; reverse transcriptase; AGT1.
XX
OS   Anopheles gambiae
CC   Anopheles gambiae (strain G3) DNA.
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea;
OC   Culicidae; Anophelelinae.
XX
RN   [1]
RP   1-4634
RC   [1]  (bases 1 to 4634)
RA   Besansky N.J.;
RT   "A retrotransposable element from the mosquito Anopheles gambiae";
RL   Mol. Cell. Biol. 10, 863-871 (1990)
RX   MEDLINE; 90158600.
XX
DR   GENBANK; M93689; 93.0.
CC   Positions       1    4634  Accession No M93689        GenBank (rel. 93.0)
XX
SQ   Sequence 4634 BP; 1059 A; 1101 C; 880 G; 1593 T; 1 other;
     agagagagat cgactgtcaa accgagtggt tgtgccttcc ttgtgctcct gatttttgat        60
     gctgttttgc cgtgttactg cctgattttc aacatttgca acattggtgc tgctgagttg       120
     cttgtactgg ctagtgcgtg ccttcgattg ttatcaagtt gcacttgaat tcttgcacct       180
     agtctcctgt tatttcgtca gttttgccga gatattgttt ggcttcgttc ctgctcctgt       240
     cactcgtcag tttgtgctgt gtcattcgtt atgcagtgct caacctgcaa tgcacccacc       300
     gatagtgcaa attcggtgtc ctgcgccggt gtgtgtggct ccaagcatca tacccattgc       360
     acgggtttgt cccgtgattc tactcgagag cttgggcgga ataatcaatt gttgtggttg       420
     tgcaaaaatt gtaacgagtt tcgcaatggc acaaactcac ttctcacaag tgagatagca       480
     gccctactcg agttggtgaa agcagaaatt ctcaccacga ttgactcatc tctctcttct       540
     cttagatcgg ctatcaagag cgatttgctt gctgagatcc tcgctctcgc tgataagcta       600
     acacccgtat tagctaagcc gtctgtttct cagccatcgc gaacgcacac gtccactaat       660
     gcatcgtcac tcaacgccac taataccaga acgactaaaa cagcatccac tcgccgtaca       720
     tttaccaact caatggagct cactgcagat atccaacaag cagcgaacga taccaacact       780
     gtggaagctt ctgatagctg caaccactac actcatcgta ctaaggtgac tagtgatatt       840
     agtgctgggc catgccgaac aaatacaaaa tcatcttctg atcctgtttt gaaccatgat       900
     accacgaaca ctggcatagc agaaaaagta tggttatact tcacgaacat caaatcgcat       960
     gtctccgctg atgatatgcg tgtgtggctt aaagctgtgc tgccaaccga caacatagat      1020
     gtttaccgtc tcacgaaaaa gggtgcaaac cttgatttga tgtcctttat atcgtttaaa      1080
     gtgagtattc ctaaatcact taaggatctg gcgcttcaat ctactatttg gccagtttca      1140
     cttactgttc gtgagtttgt tgatcgtggc ctaccaaagc aacgtataca tgaaagggcc      1200
     cgatttgacc cttctgcgct tacttcgcat cgttcaagca gtgcaaattg ctcttcagct      1260
     gcgccaaaaa gcaccgctca tccggatcat tttttggatc atcgatcgcc atccccacag      1320
     cgcgggaatc aatcactatc ccagatgacc gagatcctag aggctatcca accggagttt      1380
     cctcccacac cccctcagtt atcaccgggg gtggggcttc aatcacagaa caatctcagc      1440
     aacacgaatc gctcaccaca gatcagcccg tttgccaaac ggatagctca caattaatag      1500
     acccttcgtg atctattacc aaaatgttcg aggccttcgc accaaatata atgaattgcg      1560
     cctttctgcg aatgaatcag ggtttgaaat gcttgccctt actgaaacct ggttaaatga      1620
     atcgattcca tccaatatgg tcctggatag tgattcttac aatatatacc gttgcgatcg      1680
     cagcaggtta aacaatgaac gatcgcgtgg gggtggtgtg ctgcttgcat gttccagtcg      1740
     ttatccgtct gtggcactta acatgaatca acctacgctt gaagctttat gtattcgtgt      1800
     ttcttttcct aagtttcgtc tttatgtggg gattgtttat gtgccaccgt atttgagcag      1860
     cgaccgcaac tatttcgaat ccctttctgc tttcatcagn gatgcataca tgcatatgaa      1920
     accgaatgat catcttatcc ttcttggcga cttcaatcaa ccggcgttag ggtggtcgcc      1980
     tgcagccgca gtaaggtcag attcatcttt acctatgaga cattatgtgc cacatatctc      2040
     tttgaattca tccagttcct gctttttgga tgtgttaaat ttgcatgaac tctatcagct      2100
     gaacggggtg cataaccatt caaatcatta tctggacctg gtgctctcta actctgctgc      2160
     tgctgcttgt tcttctgtgt atcctgcttc gtcactgctc ctgccccagg atgcccatca      2220
     tcctgctctg gaaattgcgt taccgtcttc tttatttagg gctagtaggg ttaggaatga      2280
     attgccttct gctcctaatt cattgagtgt tcgttataat tttcgtctta cagactatcg      2340
     taaacttaat tctattctat ctcgtgccga ctggtctttt ttttatcaat gtacatcggt      2400
     cgacgaggct gtccaatcgt ttaatgcttt gttaacctct gcactccttt catgtacacc      2460
     tatttttcgt tcccctccta atcctccctg gtccaatcgt actcttcgca acctgaaaaa      2520
     ggatagaatg aaatatctta ggaggtatcg tctgaaccga tctgctttca actttcgttt      2580
     atttaagtac gctgcctctg cgcatcgact atacaacagg gctcgttttg aggcctattc      2640
     gagtagactg caatcgcgtt tccgttctga tccagcatcc ttctggcaat ttgttaggat      2700
     tcgaagaggg tgcaatacgt tacctaatga aatggtactt gattctcgaa ctgcctctac      2760
     gcctgttgag atctgtgagc tattctctgc acatttttcc caaatgtttg agccaccggt      2820
     tagtgaccct aaccttattg agggtgggct actctacacg ccagagaact taattaatct      2880
     ctccgatatt tcggttagct ctgaaacagt tgtacaggtg ttatttgggt tgaaacgttc      2940
     ttttactcct ggtccagatg gcattcctgc ctcagtttta ataaactgta aggacgtgct      3000
     tgctccacac cttgctaaaa ttttcaacct ttcactttct ctcggggtct ttcctgctct      3060
     ttggaaatcc tgttggcttt ttccggtaca caaaaaggga tgccgtagca ttgtctctaa      3120
     ttatcgtggg ataactcaaa catgtgccac agccaaaact tttgagctat gtatctttcc      3180
     aaccatactt catagttgta gttccgctat tagccctaaa cagcatgggt ttatgcctgg      3240
     taggtctact tctactaatc tcatgtcttt tgttaccaat attttcagat cttttgaggc      3300
     aggtacccaa cttgatgcaa tatacactga ctttcatgct gcatttgata gtttgcccca      3360
     ctctttacta ttagctaaac tatctaaact tggttttggt gatggcatta ttagctggct      3420
     gtcctcatac ttaagtaatc gatcttgcag ggttaaaacc gggtcgtact tatctgagga      3480
     gtttttttgt acgtcaggtg tccctcaggg ttgtgtgcta agtccacttc tgttttcttt      3540
     gttcatcaat gatgtctgta atgttttacc tcctgatggt catctccttt atgcggatga      3600
     tatcaaaatc tttttacctg tgtcctcttc ttctgattgt atgagtcttc agcattacct      3660
     taatgcattt gttcattggt gttcatccaa cttacttcgc ttgtgccctg ataaatgttc      3720
     tgttatttct ttctctcact ctctttctcc tatttcattt aactatactc tctctaactc      3780
     gtctctctct cgtgttttgt ccatccgtga ccttggtatt atactcgaca gtcgtcttaa      3840
     ctttaaactg cagcttgatg aggttctact aaaagctaat cgaactcttg ggtttatttt      3900
     acgttttacc tctattttta gagatcaaag cttcttaaga aacctttatt atgctctggt      3960
     aaggcctctt cttgaatatg ctagcatcat ctggaatcct cctactattg atggctgttc      4020
     gagaattgaa agcattcagc gcctttttac cagggttgct tttcgtcgtt tgttcggtgc      4080
     tgcctcacta cctccctatg aaacgcgatt gcagttattc aatcttcact ctttaagctt      4140
     ccgccgccaa gtgtctcagg catgttttat tggtggctta ttactttctg atactgatgc      4200
     tcctgattta ctctcgtcca tctcgttgta tgttccctct cgttcccttc gtcctcgtga      4260
     tcctctgtca attgaaacac gtcatactct ttatactttc aatgatccta ttctatcctg      4320
     tttcaggttg tttaaccact tttactatct ctttgatttc gactcctctc tcaactcttt      4380
     ccgtaaccgt attttttctt ctaattctct ttaattattc ttctaagttt cattaagttt      4440
     tgatagtctc tacgctctac ctatgttttt ttttctttaa tttttttgct aggtctagac      4500
     tagtttagtt aggcttagtt tttcatgaat tattttgttt atttgttagg gtttatttag      4560
     ttttaagtct gccttattta gccttgatgg cggatattgt attaataaat gaaatgaaat      4620
     gaaatgaaat gaaa                                                        4634
//
ID   R4_AL     repbase; DNA; INV; 4686 BP.
CC   R4_AL DNA
XX
AC   U29445;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Ascaris lumbricoides site-specific non-LTR retrotransposable
DE   element R4 in 26S rDNA, complete sequence.
XX
KW   Non-LTR retrotransposon; ALR4.
XX
OS   Ascaris lumbricoides
CC   common roundworm.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda;
OC   Secernentea; Rhabditia; Ascaridida; Ascardina; Ascaridoidea;
OC   Ascarididae; Ascarinae; Ascaris.
XX
RN   [1]
RP   1-4686
RC   [1]  (bases 1 to 4686)
RA   Burke W.D., Mueller F., Eickbush T.H.;
RT   "R4, a non-LTR retrotransposon specific to the large subunit rRNA
RT   genes of nematodes";
RL   Unpublished (1995)
XX
RN   [2]
RP   1-4686
RC   [2]  (bases 1 to 4686)
RA   Burke W.D.;
RT   "Direct Submission";
RL   Submitted (19-JUN-1995) William D. Burke, Biology, University of
RL   Rochester, Hutchison Hall, Rochester, NY 14627, USA
XX
DR   GENBANK; U29445; 93.0.
CC   Positions       1    4686  Accession No U29445        GenBank (rel. 93.0)
XX
SQ   Sequence 4686 BP; 1269 A; 1058 C; 1365 G; 994 T; 0 other;
     ggggccggtg ggtttactca cttctgaccc accaccaacg gaacgaggga aagcagagct        60
     ggggccctct tccgattggc atggaaccga cctccacgtg gtggccctgg gcaacggaat       120
     tcaagagagg atttaatcct ctctatcatt tgcaagatgg atgagatcga ggtatccggc       180
     aaacaggttc caagtgagca cctttcccat agctgggaat atgggttagg cgtcctctga       240
     catataagag gaatcagact cgttcgcgcc cggtcattaa catcgatcag cgggagggcc       300
     ggactgaagt aaatttcctg ttggcccgag tgcaggtgga gctcggaccc gaaaaacgat       360
     ccctaagagg accacaaccc gaagggatgg acgcagtcgc cccggcacgt ttggtgttgg       420
     ttatcctgga gtgttgtggg acgaatagct atgccttgtt caactaactc tttttttgaa       480
     cgagggaccc ctgagcccca tcgtgagcca atctcaggga ctgactcttc ggagtcctta       540
     ggtatgggta cccaccgttc acctcggcta aatgatgacg aggtgataaa cggccccaag       600
     ggtcacgaaa gtgacccggt tcatgtagtg cgtgcgcctc gaacgctaca cccgaggcga       660
     ttggaactcc caatcggagt aaataatctc ggagaagcct ctcaactacg gcaagattca       720
     gcaatagctg aggaagccca attggagagc accgagaacc atgatggacg tcgccctcct       780
     ttgagaggcg gcaggaagct ctggagtgaa aaggagatcg ccacattaag gagattgtgt       840
     gaggcctatg gaaataggca ggtatgctgg aaagaggttc agaggaagtt tgcggacttc       900
     cacgaggaaa gaacagtggc tgcgttagcc acgaagtggg gggctcttaa acgcccgaga       960
     gctccgatgg ttggtgcgcc accgactcct gatcatgatc cagagcgtgg accagcgggc      1020
     gagggagatg gaggtacaac ctcgcaagag aatgtgccta ccgatgatcc aatacccgcg      1080
     aacggcccga cagagggcaa ggaatcggat gtgagaccag ccgtggcctg taggtgcacg      1140
     gaaccggagg agcaactgat ggagtcggat gtgagaccgc ctgcagtcgt aagacttgca      1200
     gatccggagc agcatacgat gaagtcgggt gtgaaaccgg ttgcacttga cgggtcagcg      1260
     gatctggagg agcgtccgaa agagaaggat atcgagcaga tgggtgttga ctttgaaggg      1320
     gaaccgaggt ttcgtgcctt tcggaaagcc ttttacgggt atttcagatg ggctgtcaac      1380
     tcgtttgata gggaacctgt caagcgagtt aggcgggact gtcccaaggt attttacgct      1440
     tatgcggatt accttatcgc aaccggaagt tctaaggcgt tgggaccgaa tcaatccagg      1500
     attggtcgct tgaacggatt ggtctatgcg gcagctagaa caatccacca attctggaga      1560
     gaagaggtag gccatcgtca gcaaggcgag aagggatggt acacgaaaac caaggcaacc      1620
     cgtgaagacc ttcagatgct catctctatg atggaatctg aacttgcaag aagaaaggag      1680
     aagaggaagc ccggcgcgaa agagctggag aatatccata agctagttgc aagacttgga      1740
     acgcgcagca catcgggcat cgtcagaagg ctggagatga caagacagag gctcaaactg      1800
     ttggaagaca gaataagttt gcatgagcaa gagaagaggc ggaaacgatt gcgcaagcaa      1860
     tttgcggaaa ccccttctct aaaattactc acaaaaggag ccaaggatag gggcgatacg      1920
     atggtaacca tgaaatctgt aatggacttc tggagaccaa taattggcag acgagttacc      1980
     tccaatccgg accaattgca agtcttgaga gactggagag atgagcagaa gaaggcttat      2040
     ccggcagacc tggatttaga aaaggccgat cttgaggaga aatatgaggg agcaatcagg      2100
     agaatccaac cgtggaaagc tcccggtccc gacggattac atgcccactg gtggaaagct      2160
     ttaccgtcgg ccaagaggct actgggtgaa ctggtggttg attggctgac aacaggtaag      2220
     gttaccactg gctggatgtg ccgagggagg acaatcctga tccctaagaa gggtgatagg      2280
     ggcgaccctt ctaattaccg acctataaca tgtttaaata catgttataa ggtgctaaca      2340
     tcggtaatga attcagtcat tctgagtcac ctgagcagag gcgaagcttt accaatgaac      2400
     cagcgagcaa tgcggaaacg cgagtggggt tgcacccacg ctatggtcct tgacagggcc      2460
     atggtaatgg atgcaatggc tcaaaagaaa cactcattaa gtgtggcctg gcttgactat      2520
     cgtaaagcat acgatagtgt gtcgcatgaa tatattcgct gggcgattaa ctccgtgaat      2580
     ataccccgga gtgttcagct gacgctcaag aggctcatga gtgactggga gacacgcttt      2640
     gagtcgacgc aatgccggcc gaagttaagg tctgacaaaa tgaaagtgct gaatggcatc      2700
     tttcaaggtg actcgttatc accaaccctt tttgtattat gcatagcacc tatcagctac      2760
     gcactcaata agggtgtcgg ccagtgtcaa tcctcatccg gctggagtgc aggttacggt      2820
     tttgagattg gacatcagtt ctatatggac gatcttaaac tgtacgctag gacgcctgcg      2880
     atgctagact cccaaatcca ggtggtgtct gaggtgtcgg aagcaatggg actccatttg      2940
     aatttgagta aatgtgcgaa agcacattat gctccgcatg gggcgggcgg agcgcaagaa      3000
     gctgtggaag gtgcagaagg atcgaggaag ggagaaatcc cgatactcgg gcttcgaagc      3060
     acctataaat atcttggagt ggaacaacga ctccttccga tggaagtagc cctcaaagag      3120
     ttcgaggata agtttatgga tcgagcagaa acaatcttcg ctagcgaact cacatggggg      3180
     cagatggcca cagcgtataa tactatagct atcgctggtc tacgatacgt ctatagtaat      3240
     acaaatggag catcaccaaa gcttctagaa gccctgaaaa gggcggccac cttagacacg      3300
     cggataagag atcttttgag gcgacataaa tgtcggtttc gaaatagctt tgtcgagagg      3360
     ctgtatatcc ctagagaatg cggtggatac gggttaaaat cagtggagga tacgctgcga      3420
     gagagtatcc tcgctacgtg gagttacatc gccacgaacc cgcatttggc tggacaacag      3480
     tatttcttcg agaggcttgc agcaagaggc aagcgcaccc cgatggcgga cggggtaaag      3540
     atattgttgg atctgggagt ggaaccccag gtggacttga agcgaaggac ggtgaccgtc      3600
     gacggtatag tcttcgaaga cccgaccaag cttcatcgat acctggtggg aaagctctta      3660
     aaagcaagaa ctgaggcgag gattcgaaga tggaaggaag ccagcttagc tggacggttg      3720
     gtaaatgaca caagtattga tatgcgacta tcatgcttgt ggatgaaaaa aggttttgtg      3780
     agtgcgagga acctcagaga tgcgcttgct gtgcaagagg ggagtttgct tactagagca      3840
     tgccctgctc taaagggtaa aggcggccaa gaagtttgcc ggtgttgcca tgcagcgccg      3900
     gaaactgcag agcacataac atcagcctgc cgctattggc ttccaagtct ctacgttgag      3960
     agacatgact cggtagcaag gaacctctat tacgtcatat gctgccgcta cggcataaca      4020
     ccggtgcatt actcaaatag ggtatcaccg ctctcggaga atagccaatg ccgcgttctt      4080
     tggaacatgg atatgcagac tcggacgcca atgaagcatc gaaagcctga tatagtcgtc      4140
     tttgatctca agagggaaaa gatcctcatg ttcgaagttt cgatagccca tgccagcggg      4200
     ttattgaaac agcgggaaat caagatcaat cggtatacgg tgaactccga agagttgcct      4260
     gatgagacca taacaccgta tccgcctggg ccgaatttgg ccgctgacct cgctgccacc      4320
     tatggttggc aggttgaatt tgccccagtg gtggttggca cgtgtggtga gcacgtacca      4380
     gccgtcaaag aggacctgca aagaacgttg gatctaaaac ctcatcaagt cgaagccctt      4440
     cttgaaagga tatcccgatc ggcggtgatc ggaacggcta gagtagtccg agcacacctc      4500
     gcctgctcct agtcgctaag gggtccggaa atggtccggt cctgcgctac ccggttctgg      4560
     tagcacgttc aagcgctcaa tcgcctgcct tgtaggcagt ccatctgtgg aagtcgcgct      4620
     cttgatacag atgtggacgg atggaagcag atgatagagc cggtgacggc cctactagcc      4680
     aaacgc                                                                 4686
//
ID   R4_HC     repbase; DNA; INV; 1449 BP.
CC   R4_HC DNA
XX
AC   U29590;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   Haemonchus contortus non-LTR retrotransposon specific to the
DE   large subunit rRNA genes of nematodes.
XX
KW   Non-LTR retrotransposon R4; HCR4.
XX
OS   Haemonchus contortus
CC   Haemonchus contortus.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda;
OC   Secernentea; Rhabditia; Strongylida; Trichostrongyloidea;
OC   Trichostrongylidae; Haemonchinae; Haemonchus.
XX
RN   [1]
RP   1-1449
RC   [1]  (bases 1 to 1449)
RA   Burke W.D., Mueller F., Eickbush T.H.;
RT   "R4, a non-LTR retrotransposon specific to the large subunit rRNA
RT   genes of nematodes";
RL   Unpublished (1995)
XX
RN   [2]
RP   1-1449
RC   [2]  (bases 1 to 1449)
RA   Burke W.D.;
RT   "Direct Submission";
RL   Submitted (20-JUN-1995) William D. Burke, Biology, University of
RL   Rochester, Hutchison Hall, Rochester, NY 14627, USA
XX
DR   GENBANK; U29590; 93.0.
CC   Positions       1    1449  Accession No U29590        GenBank (rel. 93.0)
XX
SQ   Sequence 1449 BP; 402 A; 313 C; 407 G; 327 T; 0 other;
     tttacatgga cgacgtaagc tcgggaagta cgctgtaaac agcaatctac ctgaggagac        60
     tggaccggat gggttccatc caggcccaaa tctccgagca gccctgcaaa gggaccgtaa       120
     gtgccgggta gatgtcgtac ctattgtctt aggagcttgt ggagaggtat cgtcgaacct       180
     aaggcaatat atatgttccc ttgagcttcg agacgatgct actgtcctga tagagcgtat       240
     cgagcgtagt accatccttg gcacaaacag gttggtgaaa tgtcatcttt ccaacagtat       300
     ggagtgaagc gagggccatg gagtcgcagc gaagtatgta aggtgcactg gtgctgatgt       360
     gctggtcagt tcgcccggac cagcgcagtg catacactga aaagctgcta tggactcgac       420
     acgtttacag tttaacgggg aggtaacagg ctagtctctg cgttaaaaat ccaaaaaaac       480
     tgaaaaatac aaaaatccta aaaacaataa aatacataac cctaaaaaca ataaaataca       540
     aaaacacaaa aaaagacgcc ttgtgcgtgt gtatatagat gtacagcttg tatttgttgg       600
     agcgaaagca cttgtatata tctatataat atttgtattg ctgtacatag ctgtaaatat       660
     agtagttcgt agtagtagcc ctagtcgcca tacgggttat gtatacgggt ttttgtatgt       720
     gtatttgttt gaaattccgg cgtgttctac gctcgggatg ctgatgatgc atactgtgta       780
     tgcgaaaaat atacgcagag tgttacccta accccggccc ggtgtcagac gccagacgcc       840
     cggcgctaag tcctagcttg cagtgttcag ataagaacag gaacaactag agtaaggtag       900
     aaagagggga ccattcggtc ctggggcggt atgctatagc actgcaaagc taagggatga       960
     agtgccacct aggaaggcga acgtggtgag tactaggaca gtggcggagt gcgcagcaac      1020
     gaccaatgtt ccatgacccc agatggcgag tctgtagaga gaacaaaggc gaccgggtaa      1080
     aagccacgta cggccgaaaa gcggggaaag gcagtgcgag acctcgaagc attcacttcc      1140
     gagagcttcg aggaactgac cgagtacctg cttcaggagt tgagatggct ctcctggagt      1200
     cggtctcccg gggggagctg accattcgcg tttgcctttg cggctcgcga ccgggggggg      1260
     tttatacctt cccaacaggc acccacctga gaggtacccc tatgaatcgt ggaaggttcg      1320
     cctgaagcga ggagggggcc gtcgcgtacc ggttctgcga tgactcggcg tccagaacgt      1380
     tctctatggt ttgcaacgat tagatataaa caagccatag cagacggtac aagtggagag      1440
     ggttagagg                                                              1449
//
ID   L1_TC     repbase; RNA; INV; 5002 BP.
CC   L1_TC RNA
XX
AC   X83098;
XX
DT   22-DEC-1995 (Rel. 2.0, Created)
DT   25-MAR-1997 (Rel. 3.0, Last updated, Version 2)
XX
DE   T.cruzi mRNA for Non-LTR retrotransposon.
XX
KW   non-LTR retrotransposon; endonuclease; reverse transcriptase; gag; L1TC.
XX
OS   Trypanosoma cruzi
CC   Trypanosoma cruzi.
OC   Eukaryotae; mitochondrial eukaryotes; Euglenozoa; Kinetoplastida;
OC   Trypanosomatidae; Trypanosoma; Schizotrypanum.
XX
RN   [1]
RP   1-5002
RC   [1]  (bases 1 to 5002)
RA   Martin F., Maranon C., Olivares M., Alonso C., Lopez M.C.;
RT   "Characterization of a non-long terminal repeat retrotransposon cDNA
RT   (L1Tc) from Trypanosoma cruzi: homology of the first ORF with the
RT   ape family of DNA repair enzymes";
RL   J. Mol. Biol. 247 (1), 49-59 (1995)
RX   MEDLINE; 95205412.
XX
RN   [2]
RP   1-5002
RC   [2]  (bases 1 to 5002)
RA   Lopez M.;
RT   "Direct Submission";
RL   Submitted (30-NOV-1994) M. Lopez, Instituto de Parasitologia y
RL   Biomedicina, C.S.I.C., Calle Ventanilla, 11, 18001, Granada, SPAIN
XX
CC     mRNA            103..1230
CC                     /partial
CC                     /gene="ORF1"
CC                     /product="ape family protein"
CC     mRNA            1799..3625
CC                     /partial
CC                     /gene="ORF2"
CC                     /product="reverse transcriptase"
CC     mRNA            3993..4967
CC                     /gene="ORF3"
CC                     /note="gtg start codon"
CC                     /product="gag-related protein"
CC
CC   	 This element is present in a high-copy number, and is found 
CC   dispersed throughout the T. cruzi genome. Northern analysis shows an 
CC   abundant expression of L1Tc-related sequences with a major band of 
CC   about 5 kb. The transcript has at its 3' end a fragment of a highly 
CC   repetitive DNA sequence (E12A), at its 5' end a ribosomal mobile 
CC   element-like sequence and three putative open reading frames (ORF)
CC   in different frames. 
CC      The ORF2 codes for a protein which has significant homology with 
CC   the retrotranscriptase-related sequences from non-LTR retrotransposons
CC   containing the seven domains present in all the retrotranscriptase and
CC   retrotranscriptase-related proteins. The ORF3 codes for a gag-like
CC   protein showing unusual cysteine motifs present in all non-LTR
CC   trypanosomatid elements, similar to the C2H2 zinc finger family of
CC   transcription factors. Interestingly, ORF1 codes for a protein with
CC   significant homology to the major human AP endonuclease protein, and
CC   maintains in similar positions most of the amino acid domains
CC   described for all the Ape family of proteins. The presence of
CC   Ape-related sequences, described for the first time in a non-LTR
CC   retrotransposon (L1Tc), may have functional relevance for these types
CC   of elements.
XX
DR   GENBANK; X83098; 95.0.
CC   Positions       1    5002  Accession No X83098        GenBank (rel. 95.0)
XX
SQ   Sequence 5002 BP; 1212 A; 1404 C; 1259 G; 1127 T; 0 other;
     ccacgcgtcc gctgtactat attgcaggat attttctaca taatatttgg cgaaggagag        60
     gaaattgttt tctgtgttga caatgagtct ttctatgagt gagcttccgc cctggctcag       120
     ccggccacct caacgtggtg ccagggtcta gtactctttg ctagagagga agctaagcgc       180
     ctgctgccca tccgctgccc gcggagaggc aggaggcgcc gcacaaacgg gtcggaaggg       240
     caccagatgg agccatttac atggctgccc gcggagcatt tctatccgct gctgaattcc       300
     atcggcgctt atcagcgcta tacataccgt ttgcgtgccg tatgtgacgc gcaacgacaa       360
     aagctactgc taagcggaga cattgagcag aacccaggcc ccatagcagt actccagatg       420
     aacgtttctt gcctcacgcc gtcaaaactc gcaacattaa tggcgcaagg agcagacata       480
     atagccattc aggagacttg gaagtcgtca gagcagatcg ccagcatgca cactggagat       540
     tatgtgctct atgcacagtc gcgcatcggc aagggaggcg gtgtggcggt gctggtgcgg       600
     aaaaatctcc gctccaagcg tatacctctc accatccccc agcacgacac cagccttgaa       660
     gtggtggtgg tccaggttgc tctggaccag aaccgtgatc ttattgtagc gagtgcctat       720
     atgagaccac caccgcaagt aacgcaatcc ttcaggcggt tagtaaactg ccttccagcc       780
     tcgtcgccgc tcctgctgtg cggggatttc aacatgcatc acccacagtg ggagccattc       840
     ttggagactt ctccaagcga ggttgctgca gaatttttag aactgtgcac ggatgcggga       900
     ctcaccttgg ttaacacccc tggtgagatc acgtatgccc gtggcacaag agaacgatcc       960
     tgtatcgatc tgacatggtc aaagcatttg actgtgtcgg attggtcagc ttccgtgtcg      1020
     ccgcttagtg atcattatgt gctgacattt acgctgcatc aggcatttaa ggataccata      1080
     ccttcggcac cccttcggca cctaagtttt tctacagttg ggggaagtgc aagtgggatt      1140
     tattcatcaa ggacttcgac gcacaacttc cggcatacga ctataaaaag cagtccaccg      1200
     gcattaaggc tttcacgaga gcgcttataa cttcgtatcg acgacattgc ccccgcggca      1260
     tgcacaagga cggtcccagg ctttgggacg acactctcat ggaggcagag cggattgcta      1320
     ccgacagcaa ggcccgctat ctacagttac cgacgcccga ccgtgaggca gaaatgcaac      1380
     ggacaaggag tcaattcttc ctcctactcc gagagcgttg cgcaacacgt atctacgccg      1440
     catcagcaag ttaaatccag gcgagccact cgcatggaaa tacatttccg gacgaaaaaa      1500
     ggcatcactt ccatctccca catcaatgtt attaggagat ggtcaacaca cttataaaac      1560
     agcaaggaga gcagcgaatg ctctcaatcg catctttctt ccatttcacc cctctcacaa      1620
     ggcagttagg ttttccaaag gcatcaacag acagagtgat ccttgaacat taatgcttct      1680
     tttctttttg ggcagcagac aatagcgagt ctgctgcctc atttacttca ttttcttcta      1740
     cttcttctag ctccgagccg cagaacaaca gcgagtctgc cgctacttct agctttagtt      1800
     cttccacctc tcttatctct gtatttctga gccgcagaac aacaacgagt ctgccgctac      1860
     atctacttca ggttcttcac tctcatctag ttctgagtca caggacaaaa acgaagctgc      1920
     caccacatct ggtttagttg ctcatcttca ctcccctctt gatgcacctt ttaatcgtac      1980
     ggaactgctt gctgcgctac gtaatacgcc gtatggcaag gcccccggac cggatgaagt      2040
     ctacagtgag gcactgcgac atatttcgtc aaagggcctc cgattccttc ttcgttgcat      2100
     taaccacagt tggacgaccg gtacgattcc ggttgagtgg agacgcgcca ccatcgttcc      2160
     actcttaaaa cccggtaagt cgccggaact gcttgagtca tatcgaccca tcagccttac      2220
     ctccattgtg agtaaggttg ctgagaaaat ggtactgaag agattgcttt gggtgtggac      2280
     gccgcacccc caccagtatg catatcgtag tatgcgtacc acgacgatgc agctggcaca      2340
     cctgatacac gaagtggagc ataatagaaa tcactatttc caagtgagcc ttcccaagaa      2400
     aagcggtatt ggcaatcaac tccactacag accccatcgg accctgctgg tgctggttga      2460
     tttcagcaag gcttttgact ccatagatca tcgagtcctc agtcgcttgc tggctaatat      2520
     tccgggggtg aattgtagaa ggtggcttag aaactttcta tgtggtcgct acgcgaagac      2580
     acgagttggc cacagacaca gcgatcggcg tcccatgctg cgaggagttc ctcaggggtc      2640
     cgtgctggga ccatatttgt tctcccttta cgtacaccca cttctcaatc tgctgaacag      2700
     ctttgcgggt gtcacagcag acatgtatgc ggacgacctc tctattatcg ttaaggggca      2760
     gtcccgggaa gacgccattc ccactgccaa catggttctt caaaaactgc atgcgtggag      2820
     tcaggaaaat ggcctggcca tcaacccgtc aaagtgtgaa gctgcttggt tcacactatc      2880
     cacgcacacg gagtcagatt atgatcgtga aggaaggtgg cccctggtag tggctggatg      2940
     ccaaatccca gtcatgacca tgggggcgtc gcgaactacg aagcttctcg gcatggatct      3000
     cgatccacga ctgacgctaa atgtggcggc caccaagcaa tgcgctgcca cttcgcaacg      3060
     gatatcgcag ctacgctcga tagcgcacaa agaggcggga ccatctccac atgacctacg      3120
     cacgttcgtc attggatacg gtgcttccaa attacgctat ggcagcgagc tcatatgggc      3180
     agtagcgacg gattcagcga agaatgagat gcagaagacg tacgcaaccc tagcacgcat      3240
     tgtcagcgga gttccgagca ctgttgaccc ggaatccgcg ctgctggagg ctaatatgcc      3300
     gccgctccat gtcctttgcc tgcgcgcgcg gctctcaata tttgagaaca cacgcgcatg      3360
     tcagatggac tggatgcgga gacccccgcc tgagccaccg cctcgcgccg gtttccgcat      3420
     ctcgccacta tctcgggacg agctatatgc ctttgtagac gcatacacaa aggactatgg      3480
     catcaccgag agctcaccac gcgaagagcg gttctttcgc agctccattc ctccctggta      3540
     tgcggcctcc gctcaccggg tcaccatcgg tgtggaactt ccgatagacc actcgatcac      3600
     cgacgaagaa gagctgataa ggtaaaagcg cagagtcagc taagaggctc tggtgctgca      3660
     cagccatcgt tcgtggatac ttgcgaccga tggcggtgtc gacgttccca agtcagcagg      3720
     ggttggaata ctgctttcat ccctcaactc atcggagata atagaaaagg ccagcataaa      3780
     ctgcggtgca cgcccatgca gctacaggac ggaatcccgt gcgctgcttc tagccctaga      3840
     gaagctgatg attcctcgta tccgccacag ggctaaaacc ctgcttgtgg ttacggacag      3900
     tcagtctctt ctagcggctc taaacaaggg cccgctcagt cagacagact ggacggagga      3960
     tcagatctgg cagcgtctct tgacactgac gcgtgctagg ctggtccgtg cacctgcagt      4020
     tttgttacgg acattgcgga gtacatgcta acgagcttgc agatcagtat gcgacgcaga      4080
     ctatggaaag tggacaatac acggagcaag gaatcgcacc tttatggcac acggatctgc      4140
     tgacatgttt tactacccag ctcaccaaca agtggcgtag tacccttcgt caagacactc      4200
     atcgctactt gctttgcggc acaaggccat cagatctcag cggtaaggac ctgatcactc      4260
     aggaagttct acaccgtcag gaactggttc acctcgcaag ggcaaggtgc ggggaatctg      4320
     agctctgggg ccgactatac tgggccgtga gagattgcac gaaccaatgc cgattctgca      4380
     acatctcacc ggaacagtct gcatatatgc gctctaacaa cgatccaact gcaccgggga      4440
     cggacactgt tcccccgtcg gcgagggagg aagacgtctc tccagtaagg agacggaccc      4500
     tcacacgccg tcggaaggag aaatgtccgc actgtgattc cacattgacg ggattctcgg      4560
     gtctcgtcag tcactgtcgg tcatttcatc cggaacatcc cccaccgctt cccgagctca      4620
     aatgtgattt ctgtgacatg gttttcccca cacggagaag caccgcacag cacagaagtc      4680
     cgtgcgcaca caacccagac gccacacggc atcggaacag cagtgccagg aggcgatctc      4740
     tcgtgccgca ggatcagcca gcttccacta gcacgccaat cggcccgcag gaaaccttgc      4800
     accatctgct tctagaatgt ccaggcacct tggctgtgcg tcaacggctg ggcattgaac      4860
     aggaccttcg cctcggaaag ttctctcaat ggcagttgct tcatagcagg aaacttttgt      4920
     cgttgctcga ccacctcttc ggcactcaga tggcactgta tagctagacg cgctggtagg      4980
     agtagtaaaa aaaaaaaaaa aa                                               5002
//
ID   HITCHHIKER repbase; DNA; INV; 582 BP.
CC   HITCHHIKER DNA
XX
AC   S81657;
XX
DT   11-NOV-1996 (Rel. 2.1, Created)
DT   11-NOV-1996 (Rel. 2.1, Last updated, Version 1)
XX
DE   transposon Hitchhiker.
XX
KW   transposon; 3 bp target site duplication.
XX
OS   Lepidopteran.
CC   Galleria mellonella nuclear polyhedrosis virus GmMNPV host=TN368
CC   cells transposon hitchhiker.
OC   Lepidopteran.
XX
RN   [1]
RP   1-582
RC   [1]  (bases 1 to 579)
RA   Bauser C.A., Elick T.A., Fraser M.J.;
RT   "Characterization of hitchhiker, a transposon insertion frequently
RT   associated with baculovirus FP mutants derived upon passage in the
RT   TN-368 cell line";
RL   Virology 216 (1), 235-237 (1996)
RX   MEDLINE; 96187810.
RL   REMARK    GenBank staff at the National Library of Medicine created this
RL   entry [NCBI gibbsq 177068] from the original journal article.
XX
CC   39-bp imperfect inverted terminal repeats.
CC   Trinucleotide target site, TTA.
XX
DR   GENBANK; S81657; 96.0.
CC   Positions       4     585  Accession No S81657        GenBank (rel. 96.0)
XX
SQ   Sequence 582 BP; 142 A; 153 C; 136 G; 151 T; 0 other;
     gggccctcgc ccacggcgac tttttgtagc gatgcagtcc cgcgtttagc aaacgcgcga        60
     cggcatcact tctaacgcgt gttagtcgca tttgcaacgc gctactgcat cgcgattgta       120
     tcgatacaaa cgctcgtgcg cttcgcgcta ttaacgcgaa agcaattcac aaaacgtcga       180
     atatgacatt ctataacaac ttttgaattt aagatcataa tttttgagtt gtttgaatgt       240
     tgttacatga tgtccacaaa gtaatctctg ggtattaaat ggatgcatcc aatattgacg       300
     ctgcttccgt tgcctacgct tcggctgctt acgtaaaagc agcactaaag acaacgtgac       360
     taatgttgcc tcaacggagt ccatcttgca actgtactga tccaagatcc actgatccga       420
     atcacgtttg catcgcgacc gaatcgcttt tgcatcgcga ctgaatctgg tcccgtgggc       480
     gcgggcacac agctagtgac tgcttcgcgt ctgatcgatg ctacgcgcga gagcatcgcg       540
     actgcatcgc tacaaaaagt cgcccgtggg cgagggccct ta                          582
//
ID   LTRTED    repbase; DNA; VRL; 273 BP.
CC   LTRTED DNA
XX
AC   M32662;
XX
DT   06-FEB-1997 (Rel. 3.0, Created)
DT   06-FEB-1997 (Rel. 3.0, Last updated, Version 1)
XX
DE   Long terminal repeat of retrotransposon TED inserted in Autographa 
DE   californica nuclear polyhedrosis virus.
XX
KW   LTR; retrotransposon TED; gypsy group.
XX
OS   Autographa californica nucleopolyhedrovirus
CC   Autographa californica nucleopolyhedrovirus.
OC   Viruses; dsDNA viruses, no RNA stage; Baculoviridae;
OC   Nucleopolyhedrovirus.
XX
RN   [1]
RP   1-273
RC   [1]  (bases 1 to 7510)
RA   Friesen P.D., Nissen M.S.;
RT   "Gene organization and transcription of TED, a lepidopteran
RT   retrotransposon integrated within the baculovirus genome";
RL   Mol. Cell. Biol. 10 (6), 3067-3077 (1990)
RX   MEDLINE; 90258898.
XX
DR   GENBANK; M32662; 97.0.
CC   Positions       1     273  Accession No M32662        GenBank (rel. 97.0)
XX
SQ   Sequence 273 BP; 77 A; 45 C; 47 G; 104 T; 0 other;
     tgttaggtat ggagccttaa tggatatcat cgacgctgca tttcctgtta ttgtccgcca        60
     gctgcataga aactgtctga atgacgtaaa tcgtcatgaa ccgctgatgt agcgaaattt       120
     gtaattagtt attaactcaa aattgtatgc attcctattt ctaatatcga gtaggtctca       180
     cgcattaatt attgtaattc ttataagtaa taaattagca tttaaaatca tttttggttt       240
     tttttctatc tgccgtctgc agtatacgta att                                    273
//
ID   TED       repbase; DNA; VRL; 6964 BP.
CC   TED DNA
XX
AC   M32662;
XX
DT   06-FEB-1997 (Rel. 3.0, Created)
DT   06-FEB-1997 (Rel. 3.0, Last updated, Version 1)
XX
DE   Internal part of retrotransposon TED inserted in Autographa 
DE   californica nuclear polyhedrosis virus.
XX
KW   TED retrotransposon; LTR; gypsy group.
XX
OS   Autographa californica nucleopolyhedrovirus
CC   Autographa californica nucleopolyhedrovirus (strain mutant FP-D)
CC   DNA.
OC   Viruses; dsDNA viruses, no RNA stage; Baculoviridae;
OC   Nucleopolyhedrovirus.
XX
RN   [1]
RP   1-6964
RC   [1]  (bases 1 to 7510)
RA   Friesen P.D., Nissen M.S.;
RT   "Gene organization and transcription of TED, a lepidopteran
RT   retrotransposon integrated within the baculovirus genome";
RL   Mol. Cell. Biol. 10 (6), 3067-3077 (1990)
RX   MEDLINE; 90258898.
XX
CC   LTRs of TED are named LTRTED.
CC   TED, found inserted within the insect virus belongs to the family of
CC   retrotransposons that includes Drosophila melanogaster elements 17.6
CC   and gypsy and thus represents the first nondipteran member of this
CC   invertebrate group to be identified.  The internal portion of TED,
CC   flanked by long terminal repeats (LTRs), is composed of three long
CC   open reading frames comparable in size and location to the gag, pol,
CC   and env genes of the vertebrate retroviruses. 
CC   Three conservative domains of TED open reading frame 2 (pol) encode 
CC   protease, reverse transcriptase, and integrase functions, respectively.
CC   TED integration within the baculovirus genome thus represents one of 
CC   the first examples of transposon-mediated transfer of host-derived 
CC   genes to an eukaryotic virus.
CC   misc_binding   1..17
CC                  /note="tRNA primer binding site"
CC                  /bound_moiety="tRNA primer"
CC   CDS            290..1622
CC                  /note=ORF1 (gag)
CC   CDS            2033..5287
CC                  /note=ORF2 (pol)
CC   CDS            5712..6950
CC                  /note=ORF3 (env)
XX
DR   GENBANK; M32662; 97.0.
CC   Positions     274    7237  Accession No M32662        GenBank (rel. 97.0)
XX
SQ   Sequence 6964 BP; 2399 A; 1552 C; 1210 G; 1803 T; 0 other;
     ggcgcagtcg gtaggatact cgcgggccgg ttcgcgagca atagagtcat ctcatatcga        60
     tattcgcgtt cgcgagtcgc ccgggcggct ttcaagccac atcctgagta tcctgaatct       120
     acgggacaac tgcggagcca ggcggagaat ccagacatcg attcgcagag aaagaaccaa       180
     tatgaaactt atgtaagtac acttgaatcg ttctcgtgtt gcttcctttc tattcctagt       240
     tactttaatc tctaaaaatt tttcgtcacg aaaagtttta cacccgggaa cctgcatcac       300
     gccaggctcg ccggaatatc attgatatta atagagactt agataattca gatttaaact       360
     taggtttaga tagattattt agtataaaaa tgccacacga tcctgacgta attttcaagg       420
     ctttgcgact tgtgccggaa tttaatggca accccaatat tttaacgaga tttataaata       480
     tatgtgataa actagtagag caatatgcga gcgctgagcc gggaagtgag ttaggaaatt       540
     tatgtttgtt aaatggcatc ttgaacaagg tcactggaac agctgcctct accataaacg       600
     caaatggcat tcctgaaacc tgggtaggca ttagatcatc tttaattaac aacttttcag       660
     accagcgcga tgaaacggct ttatataatg acctctcatt agcttcacaa ggtaataaga       720
     ctcctcagga gttctacgaa caatgccaaa ccttattcag taccataatg acgtatgtaa       780
     cgttgcatga gactttacca acgactatcg aagctaaacg ggcactttac aagaaagtaa       840
     ctgtgcaggc ttttgtgcgg ggactaaaag aacctttagg ttcacgtata aggtgtatgc       900
     gccccgagac tatcgagaaa gcccttgaat atgtgcagga agagctaaat gtaatatatc       960
     tgcagcaacg caatgagtct tcgagggctc acagctctcc taaaatgctt cctataccgc      1020
     aacagtctcc tgtgacccca ttcaatacat taggtattca cagaccgccg gtacctaact      1080
     ggccggttcc gatgggacaa cgtggcaatc aaccaccacc tcaacccttt aaatttaatg      1140
     tgcctaacca atatcataat cgcatgccta ctaaaactca acagatgctt agagcaccgc      1200
     caccaaatta tcatcctcag agtaacgttt tccgcttacc accacgtaat ccaccaccaa      1260
     atcaaattgt aaaaccgatg agtggagttc aacattttgt cccaaaaact ttacctgtaa      1320
     tgacgggaca tgactggcgt aaatccggga atccgccgcc aaataattac ttcaaaactc      1380
     gcgaattaaa cgttaacgaa ttctactcgt ctgacgactc atataactca gtcgactatt      1440
     attccgaacc agggtgcgac tattatactg actattataa caacccctat gactatgaca      1500
     caaacgcgac ctgttacgac ttaccttacg acgctagtga gacagaagct caaccaggcc      1560
     ctagccatgt acatgaaagt caggattttc aatcgaccaa accatcaaac gaacaaggat      1620
     agatattaac ctacagtacc aaagacaact accatatata gaattttctg atccaccatt      1680
     aaaattcttg attgacactg gtgccaatca atcatttatt agcccccaag ccgtccaaaa      1740
     atacttttcc aattactcgg tgaattacga cccatttgaa ataacgaaca tacacggtgt      1800
     cagtagaaat gagcactcaa ttacattacc atgtttccag gagtttaacg aaacccaaga      1860
     tattaaatta tttatatacc attttcatga ttatttcgat ggattaatag gactagattt      1920
     attgtctaaa tgggaggcca agatagattt aaaagacttt ttactaataa ctaaatttgc      1980
     aactaaccgc attaagctat ataactctcg taatgtcaac ctgtacgagg atatgatacc      2040
     tgcaagaagt tctaagttag taaggatacc tattaacgct acggatggcg aagttttagt      2100
     agaagaacaa atgttttgca actgcattgt ccatgaatgc gttaccatgg taaaagatgg      2160
     ccgtggatat gtagaattag agaatccaac ccctaatgat gtaatttttt acctggatca      2220
     gccagcttct gccgaattat tcaatatcaa gtgcacacaa gttgaacagt cacaacgtgt      2280
     agacgatgtt ttatcacgat tgcgtacaga ccatctcaat gaggaggaaa aagctaacct      2340
     tttaagactt tgctctcgat attcagatgt attttacatt gacggggaag cccttacatt      2400
     cactaataaa attaaacacc gtataagaac aacggacgaa gtacccgtgt acaccaaaag      2460
     ttaccggtac cccttcatcc atcgccagga agttagggac caaatcacga aaatgttgga      2520
     ccaaggaatt ataagaccat cagactctgc atggagctca cccatatggg ttgtgcccaa      2580
     gaaaatcgac gcttctggga aacaaaagtg gcgtctcgta gttgacttcc gtaagttgaa      2640
     cgagaagact atcgatgaca aatacccgat accaaacata agtgacgtac ttgacaagtt      2700
     aggtaagtgc caatacttca ccaccttaga tttggcaagt gggttttatc aggtggagat      2760
     ggaccctcaa gatatatcga aaaccgcgtt taacgtagaa cacgggcatt ttgaattcct      2820
     tcgaatgcct atgggattaa aaaactcacc atctactttt caaagagtta tggacaatgt      2880
     cctaagaggt ctccaaaata acatctgtct cgtctacctt gacgatatta ttgtctatag      2940
     tacttcccta caggaacacc tggagaacct ggaacgagtt ttccaaagac ttagagaaag      3000
     taacttcaaa attcaaatgg acaagtccga attcttgaag ctcgaaactg cttatcttgg      3060
     tcacatcata agcagggacg gtatcaagcc taaccctgat aagatttccg ctattcaaaa      3120
     atatctgatt ccaaagaccc ctaaggaaat aaaacaattt ttaggccttc tcggttatta      3180
     ccgaaaattc attccagatt ttgcacgact cacaaaaccc cttacacagt gcttaaaaaa      3240
     aggtagtaaa gtaactctta gtcccgaata tgtaaatgct tttgaacact gtaaaactct      3300
     gttaaccaac gacccaatat tacaataccc agactttacc agagaattta acctcacgac      3360
     agacgcttct aacttcgcta ttggagcggt actatcccaa ggaccaatag gatccgacaa      3420
     acccgtctgt tacgcttctc gaacactcaa tgagagcgaa ctaaactata gcacaataga      3480
     gaaagaatta ctggctatag tttgggctac aaaatatttt agaccctact tattcggtag      3540
     aaaatttaag atattgactg accacaaacc actacagtgg atgatgaact taaaagaccc      3600
     aaactcacga atgactagat ggcgactacg actaagtgaa tatgacttct ctgtagtgta      3660
     caagaaagga aagtctaata ccaacgctga tgccctttct cgtgttgaga tccataccac      3720
     ggaaatagac gaaattgact cagtaataga aaacattaaa gaacttagct caatgattaa      3780
     taacccctcc gagacatctc gacctcaaag acaaaccgaa aacacagacg aaatcagaca      3840
     gaactcgaca accgacactg tacatactag tgatgaacac cctattctgg aagtgcccat      3900
     tacaaacgaa ccactcaaca gatttcatag acagattcat cttaccgtag taggagacat      3960
     aaaacgacga cctattgtga caaaaccttt cgaaagtcat acccgaatag caatccaact      4020
     atcagagtca aacttagaac aagatgttat aagtgccatc aaagaatacg ttaacccaaa      4080
     agtcaaaaca gccctgatca taaatccgcc cttaaagatg tattctatta tccctattat      4140
     acaaaagacg ttcagaagtt catcccttaa cttagtgtta accaaagtcg aacttgaaaa      4200
     tgtcaaagag tatcttagac aacaagacat tatacgacat taccatgacg gaaagacaaa      4260
     ccaccgggga ataaatgaat gctacctagc actctcaaaa aggtattact ggcccaggat      4320
     gaaagatcaa atcactaaat ttatcaatga gtgtactatc tgtggtcaag ccaaatatga      4380
     caggaaccca atacgacctc agtttaatat tgtaccccca gctacgaaac ctctagagac      4440
     cgttcatatg gacctattta cagttcaaaa tgagaaatat ataacgttca ttgacgtatt      4500
     tacgaagtac ggtcaggcat accacctacg tgatggcacc gctattagta ttttacaggc      4560
     attgttacga ttttgcactc atcacggatt acccataacc atagttactg ataacggcac      4620
     cgaattttcc aatcaattat tctctgaatt cgtacgtatt cataagataa ttcatcataa      4680
     gaccttaccc cacagcccga gcgataacgg aaatattgaa cgtttccatt ccacaattct      4740
     tgagcatatt cgaattctaa aactacaaca taaggatgaa ccaattgtta accttatgcc      4800
     atacgctatc ataggctaca atagttccat acatagtttc accaaatgca gacctttcga      4860
     tctactaaat ggacactttg atccaaggga cccgcttgac atagacctaa ccgaacacat      4920
     tctgcagcaa tatgctcaga atcatcgtca acagatgaaa caagtctacg aaattatcaa      4980
     tgaaacatct cttgctaatc gtacggcttt aatagaaagt agaaacaaaa cgcgcgaatc      5040
     tgaagtagaa tacatccctc agcagcaagt attcattaaa aaccctctcg ccagccgtca      5100
     gaaggtagca ccacgctata cccaggatac ggtcttagca gatctgccca tacacatcta      5160
     tacgtctaaa aaacgtgggc ccgtagctaa agcgcgacta aaacgtgttc ctaaaggtaa      5220
     cacattgtta caggactctg ctgctactga caatacatgc gacgcatcct caagagataa      5280
     gacttgagac cctagctgat ggacccggac tattaccata caaactggga ccgacacgac      5340
     taaccataca ctatcattcc tttatacaac ccattgacct caacgatatt gaaaataaaa      5400
     tcgactctgt acagactcaa cttaatacat ttaggactaa actcgataac gaaacttacc      5460
     tactctatga atatcaaatt gattatctta ctaataaggt tggcaaatta ctacaccaaa      5520
     ttaaatcttt agaacctgtt agagttaaaa gaggtcttat agatggccta gggtctatag      5580
     taaaaagtgt cactggcaac ttagactacc aagatgccct taaatacgac gaggctctta      5640
     aaaccttaca gaccaacgaa ggcaaattaa catcagaatt taatagccat ctgagtcttt      5700
     gcaaagagtg gatgtcccaa cacaataaag tgttagaaca actaacttta aatcaaataa      5760
     gagttaatgc cactttagaa ctactattac aaaaagaagc ttatagggac tatagcttaa      5820
     ttaaatttgc gaaattcgca caaatcttag gaattataac aaacaacgta gaagatttaa      5880
     tgttagaaat aatcagatta gaaaatatga tggcttttat acgcgcatct agtactcatc      5940
     attccatgat tgatatagag gccttgcagt caatgataga tagattaaaa tccctttata      6000
     ctccaaatca aattctaaat ttagaactta gggaatatta cagcttaatc aagccaggat      6060
     cttatttcat cgataaacgt atagtaatag tatataattt tccaattgtt tcccaagata      6120
     catatgacct atacaaacta tccattgtac ccaacaaaag acaacttgcc cttattcctt      6180
     cctctcctta tatagcaaca gatgagaaat cgttcgtgta catagaggct gaatgcccga      6240
     agtatagcag tacttatctc tgcgaaaaga agaccggcca gcagatccag tcgaaacctg      6300
     attgtattca gaaactcatc gttcatcaga gtctagagaa tacttgtcaa ttcacgaaga      6360
     tatctctcat caaggaagca gtagaaaaat tagacgacca acattacgtg ctgtctctac      6420
     ccgaacctac caaagttcag ttggcatgtg ggagaaagga cttcaacaca cttcaaggaa      6480
     gctacctcgt aaccatccct atgggttgct atctacagac tccagaatta actataataa      6540
     acgatgacaa cgcgataaag ggtcaaccat tgaaactagc gaagatacca tacgatgaaa      6600
     tgaatctgac tgccgtctct acccacatca atttcagctc gatcgatctg gaagacttac      6660
     acagcatcca aactaaattc atgttgggaa aacctattga catcgaggag attcaaccaa      6720
     ctgccctgta ccacacaacc atcccactat acgtcatatt actgggcgca atcctatttt      6780
     tcactctgag attaattcgc aaatacaaat gttggagact aaaatcagaa gataaagaaa      6840
     agcagtcatc tcttgagata catacatacg aagacgtcaa gaaaaatacc agaaaacgag      6900
     atgactttcc agcaacattt tctcttaata tggtcaaaaa tagttgctga tctatgggtg      6960
     gagg                                                                   6964
//
ID   WUKONG    repbase; DNA; INV; 431 BP.
CC   WUKONG DNA
XX
AC   U87548;
XX
DT   21-AUG-1997 (Rel. 3.1, Created)
DT   21-AUG-1997 (Rel. 3.1, Last updated, Version 1)
XX
DE   Wukong, Miniature Inverted-repeat Transposable Element in mosquito.
XX
KW   Non-autonomous DNA transposon, MITE, Wukong.
XX
OS   Aedes aegypti
CC   yellow fever mosquito.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Aedes.
XX
RN   [1]
RP   1-431
RC   [1]  (bases 1 to 431)
RA   Tu Z.;
RT   "Three novel families of miniature inverted-repeat transposable
RT   elements are associated with genes of the yellow fever mosquito,
RT   Aedes aegypti";
RL   Proc. Natl. Acad. Sci. U.S.A. 94, 7475-7480 (1997)
XX
CC   17 bp target site duplication; TAYA target site duplications.
XX
DR   GENBANK; U87548; 97.0.
CC   Positions       1     431  Accession No U87548        GenBank (rel. 97.0)
XX
SQ   Sequence 431 BP; 143 A; 76 C; 68 G; 144 T; 0 other;
     ctgcccataa ctgcataaca gtcacattcg acatttttga caaaatggag ttaataccat        60
     ggagagtcat ccaatgataa atacttccga tcaacttaat gaaatctgtg agattgttct       120
     agaaaattcg aaaaaaatac caagttgttt tgtcacatta gcaattataa ccgcataaca       180
     gtcacattga gattataaat gagcctcgta atgtaatagc aatgaaattt ctatcagaat       240
     tattttctga ctattcacct agtatgtggt atgagttgta caaaatatca gcctcaaata       300
     agcacttttg agttcctggt aattttttga aattttagtt tcctcccata ctgcaatgaa       360
     atgtacactt ggtattccat ttactcagtg cctacttttg tcgaatgtta caaatatgca       420
     gttatgggca g                                                            431
//
ID   WUNENG    repbase; DNA; INV; 257 BP.
CC   WUNENG DNA
XX
AC   U88303;
XX
DT   21-AUG-1997 (Rel. 3.1, Created)
DT   21-AUG-1997 (Rel. 3.1, Last updated, Version 1)
XX
DE   Mosquito miniature inverted-repeat transposable element Wuneng.
XX
KW   Non-autonomous DNA transposon, MITE, Wuneng.
XX
OS   Aedes aegypti
CC   yellow fever mosquito.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Aedes.
XX
RN   [1]
RP   1-257
RC   [1]  (bases 1 to 257)
RA   Tu Z.;
RT   "Three novel families of miniature inverted-repeat transposable
RT   elements are associated with genes of the yellow fever mosquito,
RT   Aedes aegypti";
RL   Proc. Natl. Acad. Sci. U.S.A. 94, 7475-7480 (1997)
XX
CC   19 bp terminal inverted repeats; TTAA (TTAT) target site duplications.
XX
DR   GENBANK; U88303; 97.0.
CC   Positions       1     257  Accession No U88303        GenBank (rel. 97.0)
XX
SQ   Sequence 257 BP; 80 A; 51 C; 43 G; 83 T; 0 other;
     ggctaagtag cccgtcattc attttggcaa caataatgac ttttcagctt gcatttcaaa        60
     gtggtaaaac tcagtcttca tagattaaat tgacttgaaa aagtatcact gtacgcgcta       120
     acatgcataa agtatgctca tactttttca gctttgtccg tgcaaaacta tctgattttc       180
     tttgattcga aatcgtgaga tgaattagca acaataatca acgacgcgta caaatttcaa       240
     tgacggctta ctttgcc                                                      257
//
ID   WUJIN     repbase; DNA; INV; 185 BP.
CC   WUJIN DNA
XX
AC   U88306;
XX
DT   21-AUG-1997 (Rel. 3.1, Created)
DT   21-AUG-1997 (Rel. 3.1, Last updated, Version 1)
XX
DE   Mosquito miniature inverted-repeat transposable element Wujin.
XX
KW   Non-autonomous DNA transoson, MITE, Wujin.
XX
OS   Aedes aegypti
CC   yellow fever mosquito.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Aedes.
XX
RN   [1]
RP   1-185
RC   [1]  (bases 1 to 185)
RA   Tu Z.;
RT   "Three novel families of miniature inverted-repeat transposable
RT   elements are associated with genes of the yellow fever mosquito,
RT   Aedes aegypti";
RL   Proc. Natl. Acad. Sci. U.S.A. 94, 7475-7480 (1997)
XX
RN   [2]
RP   1-185
RC   [2]  (bases 1 to 185)
RA   Tu Z.;
RT   "Direct Submission";
RL   Submitted (04-FEB-1997) Entomology, University of Arizona, Tucson,
RL   AZ 85721, USA
XX
CC   26 bp terminal inverted repeats; TA target site duplication.
XX
DR   GENBANK; U88306; 97.0.
CC   Positions       1     185  Accession No U88306        GenBank (rel. 97.0)
XX
SQ   Sequence 185 BP; 55 A; 36 C; 43 G; 51 T; 0 other;
     cagtgaaacc tccatgagtc gatattgaag ggaccatcga ctcatggaaa tatcgagtca        60
     tggaacagca atcctttgga aagctgcttc tagggaccat catagtaacc atgaaatttt       120
     gtttttagta tggttccatg agtcgatatc gagtcatgga acatcgactc atggaggtat       180
     cactg                                                                   185
//
ID   QUETZAL   repbase; DNA; INV; 1680 BP.
CC   QUETZAL DNA
XX
AC   L76231;
XX
DT   21-AUG-1997 (Rel. 3.1, Created)
DT   21-AUG-1997 (Rel. 3.1, Last updated, Version 1)
XX
DE   Quetzal, a DNA transposon of the Tc1 superfamily.
XX
KW   Tc1 superfamily; DNA transposon; TIR; Quetzal.
XX
OS   Anopheles albimanus
CC   Anopheles albimanus (strain Santa Tecla) (clone: Tucur 27) DNA.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Diptera; Nematocera; Culicoidea;
OC   Culicidae; Anopheles.
XX
RN   [1]
RP   1-1680
RC   [1]  (bases 1 to 1680)
RA   Ke Z., Grossman G.L., Cornel A.J., Collins F.H.;
RT   "Quetzal: a transposon of the Tc1 family in the mosquito Anopheles
RT   albimanus";
RL   Genetica (1996) In press
XX
CC   TA target-site duplication.
CC   The closest known element to the Quetzal is the Uhu transposon
CC   from D.heteroneura. 
CC   It has 236 bp TIRs (position 1-236 and 1445-1680).
CC   The transposase is ecoded by the sequence 373-1398.
XX
DR   GENBANK; L76231; 97.0.
CC   Positions       1    1680  Accession No L76231        GenBank (rel. 97.0)
XX
SQ   Sequence 1680 BP; 561 A; 320 C; 355 G; 444 T; 0 other;
     cacttctcca caaaagtgaa tacacagcaa acagttttag gaataaatgc ctctagttgt        60
     gcatagaccg aattaaaaat atgggaaaat tatcaattat gctttgacct atttgcaatc       120
     gattgacgct tggtacgatg tccgtccgat gttgaagttc cgagaaattc tcggaaaact       180
     gctgggatgc ctcaaaatcg ttccacaaaa gtaagtacac agcacaggtg ttcgttttgt       240
     tttgaatcgt agataaactt ttaattgatg cgttaatgat cgattgggtg caatatgctc       300
     agtcgttcag atagtttcga ggtgaacagt ttttagcttc caaatcgact gcagtttacc       360
     ataattccaa aaatgaccag agaagaactt tctgtctcta aaagacaaga tattataaga       420
     ttgcacggcg ctcagggcaa aagctacaca gaaattgcaa tgttaacaaa cattaataga       480
     aatactgtcg ctagggtcat ccagcggtac aaatacgagg gccgtgtatc taatttacct       540
     agaaagggtc ggccctcggt gtgcactgat cgtatgcgac gggcgataaa acgattggtg       600
     gatgctgaac cagaaatcag tgctcaatct gtagctatag tacttaacga aaggcacggt       660
     attgccattt catgtgagac agtgcggcgg tacattcata aatttggcta caaggcttac       720
     aacaggcgca aaaaacctca gatcagccct atcaatcgga aacggcgatt agaatttgcg       780
     aaaaaatacg ttaaccaccc acccgagttt tggaaaaaag ttttatttac agacgagagt       840
     aaatttaaca ttttcgggtg ggatggcaca ataaaggttt ggcggccacc cggagaaggc       900
     ctgaacccta aatacacagc caagacggta aaacataacg gagggggtgt gctagtttgg       960
     gggtgtatgg cggcaaatgg tgttggaaat ttgcaagtta tagatggaat tatggaccaa      1020
     tatgtttata tcaacatttt aaagcaaaat ttaggaccaa gtttggaaaa attagggatg      1080
     tctcaagatt attggttcca acaagacaat gatccaaaac acacggcatt caattcacgg      1140
     ctatttttgt tgtacaacac tccccaccag ctaaaatcac cgccccaaag tcccgacttg      1200
     aacccaatag aacatgcttg ggaattactt gaacgaaaaa ttcgtcaaac acgaattaaa      1260
     aaccgtgtcg atctagaaaa caaattaaaa gaagcgtgga tcacaatttc tgaagattat      1320
     acgcaaaatt tggtaaattc aatgccacga aggttggcag aagttataaa aatgaaaggg      1380
     tatgctaccc gatattgaaa acgttacaaa atgtcgaagg acacgaaata aaaacgaaat      1440
     acccaacgaa cacctgcgct gtgtacttac ttttgtggaa cgattttgag gcatctcagc      1500
     agttttccaa gaatttctcg gaacttcaac atcggacggc atcgtaccaa gcgtcaatcg      1560
     attgcaaata ggtcaaagca taattgataa ttttcccata tttttaattc ggttctatgc      1620
     acaactagag gcatttattc ctaaaactgt ttgctgtgta ttcacttttg tggagaagtg      1680
//
ID   PEGASUS   repbase; DNA; INV; 534 BP.
CC   PEGASUS DNA
XX
AC   U47019;
XX
DT   21-AUG-1997 (Rel. 3.1, Created)
DT   21-AUG-1997 (Rel. 3.1, Last updated, Version 1)
XX
DE   Putative HAT-like non-autonomous DNA transposon.
XX
KW   HAT superfamily; non-autonomous DNA transposon; TIR; Pegasus.
XX
OS   Anopheles gambiae
CC   African malaria mosquito.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Anopheles.
XX
RN   [1]
RP   1-534
RC   [1]  (bases 1 to 741)
RA   Besansky N.J., Bedell J.A., Benedict M.Q., Mukabayire O.,
RA   Hilfiker D., Collins F.H.;
RT   "Cloning and characterization of the white gene from Anopheles
RT   gambiae";
RL   Insect Mol. Biol. 4, 217-231 (1995)
XX
RN   [2]
RP   1-534
RC   [2]  (bases 1 to 741)
RA   Besansky N.J., Mukabayire O., Bedell J.A., Lusz H.;
RT   "Pegasus, a small inverted repeat transposable element found in the
RT   white gene of Anopheles gambiae";
RL   Genetica 98, 119-129 (1996)
XX
RN   [3]
RP   1-534
RC   [3]  (bases 1 to 741)
RA   Besansky N.J.;
RT   "Direct Submission";
RL   Submitted (24-JAN-1996) Nora J. Besansky, Centers for Disease
RL   Control, Division of Parasitic Diseases, 4770 Buford Highway,
RL   Chamblee, GA 30341, USA
XX
CC   8 bp target-site duplication; 8 bp TIRs.
XX
DR   GENBANK; U47019; 97.0.
CC   Positions      78     611  Accession No U47019        GenBank (rel. 97.0)
XX
SQ   Sequence 534 BP; 166 A; 98 C; 92 G; 178 T; 0 other;
     cagtgttgcg aacggtgata gtcgtcgaca taaaattttt caaaatgata ctttttgaag        60
     catcgcattc tagatccacg cattcattcg acaatcacgg aaaaaaatat catttgacat       120
     gatgatattt tttctgctac aatcatttga ctttttgatt ttgccgtacc tcaagtgaac       180
     tagatcttca tcgaaaatgg gtcctttttt cgtgttttcg cgtgaatttc tatactcctg       240
     taagagaata ccattttcct ggttcactga gtgaaaatat caagtggtct aatggcttag       300
     tatcggtaaa cgcacgatta agcagttctg gattctcact gaaaaatgtc aaatggcatt       360
     cattctacat tttttgcaat catgtcatcg caaaagcatt gattgttaat gcacaaatga       420
     ttgtcgcttt tggaaagtcg tgtcatggta accatgaata tcatgatcaa aaaatgattt       480
     tgacacccgc ttactgcgaa tatcataaaa aaatgtcgac aattaacaac actg             534
//
ID   MLE1_TC   repbase; DNA; INV; 893 BP.
CC   MLE1_TC DNA
XX
AC   U57842;
XX
DT   28-AUG-1997 (Rel. 3.1, Created)
DT   28-AUG-1997 (Rel. 3.1, Last updated, Version 1)
XX
DE   Mariner-like transposon mle-1.
XX
KW   DNA transoson; TIRs; transposase; mariner; mle-1; MLE1_TC.
XX
OS   Trichostrongylus colubriformis
CC   Trichostrongylus colubriformis.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda;
OC   Secernentea; Rhabditia; Strongylida; Trichostrongyloidea;
OC   Trichostrongylidae; Trichostrongylinae; Trichostrongylus.
XX
RN   [1]
RP   1-893
RC   [1]  (bases 1 to 893)
RA   Wiley L.J., Riley L.G., Sangster N.C., Weiss A.S.;
RT   "mle-1, a mariner-like transposable element in the nematode
RT   Trichostrongylus colubriformis";
RL   Gene 188 (2), 235-237 (1997)
RX   MEDLINE; 97279020.
XX
RN   [2]
RP   1-893
RC   [2]  (bases 1 to 893)
RA   Weiss A.S., Wiley L.J., Riley L.G., Sangster N.C.;
RT   "Direct Submission";
RL   Submitted (09-MAY-1996) Anthony S. Weiss, Biochemistry, University
RL   of Sydney, Sydney, NSW 2006, Australia
XX
CC   Representative member of mariner-like transposable elements;
CC   it is estimated that approximately 50 copies of MLE1 are in the
CC   Trichostrongylus colubriformis genome. 
CC     repeat_region   1..27
CC                     /rpt_type=inverted
CC     CDS             join(166..519,534..818)
CC                     /note="mariner-like transposase
CC     repeat_region   867..893
CC                     /rpt_type=inverted
XX
DR   GENBANK; U57842; 101.0.
CC   Positions       1     893  Accession No U57842       GenBank (rel. 101.0)
XX
SQ   Sequence 893 BP; 250 A; 231 C; 207 G; 205 T; 0 other;
     ggttgattca taataaatcg gacaaatggt agtgatgatt tctagagatc ataactcagt        60
     aacgaattaa cgaaaatgga cgcgcgaggt accgttggaa tgggtatgaa aagctcttca       120
     aagtaccgga aaataatcac tccaaagtaa attcattccg ccacaatgcc gcacgatttc       180
     aagcggtcca gagaccacat ccgcaacgtc atactattta tatcgctatc tggccaggaa       240
     cccgcggata tcggcagacg tctgatagaa gttcacaagg agcatgcccc cggcagaagt       300
     acactgtagt tgtagcattc gaagtttgcg tcaggcgact attccatcga agacgaaaac       360
     cgcggttggt ggagcgtaca cggcgtagag tactgggagc tgctcgatga aggtaccaca       420
     gtatccgccg acgtctacgt tcgtcaatta cgagaattga aggccaatgt ccaaagttcg       480
     ctacggcggc ggtcacatgt ctacttccag cacgacaacg tgtctacttc cacagaccgc       540
     acttcgcaag atcgaccaag gccgagctgc tgtcgtacag ttggaccgta cttctatacc       600
     caccgtactc cccagacctg gccccttcag atttccacct tttctcccac agtaaacgcc       660
     acctggacgg ccaagacttc aaaactcgcg acgaggtcaa ggcggcactc ggcaacttct       720
     tcgagctcca gcttccggcc ttctggagca agggcatcca tgatctgcct ataccgtggc       780
     agaaggtcat cgataaagat ggcgtaaatt tcaagtgaat ccctgttgtc gtaaaaaagt       840
     tgtacgacaa tgattaaaat tggtcaattt gtccgattta ttatgaatca acc              893
//
ID   SR1       repbase; DNA; INV; 2337 BP.
CC   SR1 DNA
XX
AC   U66331;
XX
DT   13-MAR-1998 (Rel. 3.2, Created)
DT   13-MAR-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   Schistosoma mansoni SR1 non-LTR retrotransposon, partial
DE   reconstruction of a retrotransposon, reverse transcriptas,
DE   partial cds.
XX
KW   SR1; non-LTR retrotransposon; reverse transcriptase; LINE;
KW   CR1 superfamily; SR1.
XX
OS   Schistosoma mansoni
CC   Schistosoma mansoni.
OC   Eukaryotae; Metazoa; Platyhelminthes; Trematoda; Digenea;
OC   Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-2337
RC   [1]  (bases 1 to 2337)
RA   Drew A.C., Brindley P.J.;
RT   "A retrotransposon of the non-long terminal repeat class from the
RT   human blood fluke Schistosoma mansoni. Similarities to the
RT   chicken-repeat-1-like elements of vertebrates";
RL   Mol. Biol. Evol. 14 (6), 602-610 (1997)
RX   MEDLINE; 97333939.
XX
RN   [2]
RP   1-2337
RC   [2]  (bases 1 to 2337)
RA   Drew A.C., Brindley P.J.;
RT   "Direct Submission";
RL   Submitted (08-AUG-1996) Molecular Parasitology Unit, Queensland
RL   Institute of Medical Research, Post Office, Royal Brisbane
RL   Hospital, Brisbane 4029, Australia
XX
CC   The genomes of representative species of fishes, amphibians, and 
CC   reptiles contain non-long-terminal-repeat (non-LTR) retrotransposons 
CC   showing strong sequence identity to the chicken CR1 non-LTR 
CC   retrotransposon from birds. These nonavian retroelements have been 
CC   termed CR1-like elements. SR1 is CR1-like non-LTR retrotransposon 
CC   from the human blood fluke Schistosoma mansoni. 
CC   SR1 elements possess atypical 3' termini consisting of the tandem 
CC   repeat (AACCATTTG)2 which are similar in structure to the imperfect 
CC   tandem repeat of the 3' termini of CR1. There are at least 200 copies 
CC   of SR1 interspersed through the genome of S. mansoni [1].
CC   Although other non-LTR retrotransposons have been described in 
CC   invertebrates, this is the first CR1-like element reported from 
CC   a nonvertebrate taxon.
XX
DR   GENBANK; U66331; 103.0.
CC   Positions       1    2337  Accession No U66331       GenBank (rel. 103.0)
XX
SQ   Sequence 2337 BP; 673 A; 577 C; 454 G; 630 T; 3 other;
     gaattcctag ttgacgacct ctcaatcctg gctcccctgg ggaaaagtga tcacgccgtc        60
     ttatcattca gctttgtcag caaaacggag ctacgatatc ctactagcaa caagcgctgg       120
     aacttcaaac ggttgaatgt gttagcttta caggactatc tacaacaggt ggattgggat       180
     gttcaccctc aacttgaagt ggatgctcat tgggattttt tactgcacac gatcttatgt       240
     gctactgagc attcagttcc taaaatggtc ccaaaaagct acaagcaacc tccaatcatc       300
     aagaaccgca ctcgtcgttt gctaagccgc aaaaggcact gttgggctga atataaacga       360
     acbgataaca acggcgcgta caggcaatac aaacatataa ggaacatatg bacaaaggca       420
     ataagagaag acaggcttca gttccagacc aagcttatcg ataaattcgt ctccaatccg       480
     aaaagcttat tcagttacgc agcttctctt cgacaaggca aaactggagt ttcccaactg       540
     cttggtccta atggcccgac caataacgac agtgatgccg ctaacctttt ggctgaacaa       600
     tactcccaga cattccagct gacccacatc aaccatactg acgaaagctt cacctgcacc       660
     tgtacaggac tttccgaagt ggatctgagt gctgacctgg tgctccgtaa actgcagcac       720
     ctaagaaaag acacttctcc tggtccggat atggttcatt ccgctgtttt gagggaagca       780
     gcttcaatcc tggcgacacc acttagcgtg atgtttgcac actcgctaag cagaggcaaa       840
     ctaccggaaa tttggaagct ggcccacatc acaccaattt tcaaaggagg tcgacgcagt       900
     gaaccctcaa gctaccgacc agtggccctt ctctccatac cttccaaaat tatggaatcc       960
     ctaatatacg acggtatatt agaatactta tcatcctcaa agttcttctc acctcaacag      1020
     catggtttca gaaaaggtca ttcttgtatg accaacctgc tgactgcggt ggatagatgg      1080
     acaaccatcc ttgatcgcaa ggggaaggtt gacgtcatct acctggactt ctcaaaagct      1140
     tttgataggg tcaaccatat atgtcttatc aagaagctta gacgattggg tataaaaccc      1200
     cctttgattg attggctctc ttcatattta gaaaaccgac actttaaggt cagggttaac      1260
     ttcactctct ctcaggctat ggaatgtcct agtggggtcc cccagggctc aatactagga      1320
     cctcttctct tcttgattta cattaacgat cttcctcaac aagtttcatc tgacttattg      1380
     ctttttgctg atgatgtgaa actttggaga gagatacgta atcataatga tatactagtt      1440
     cttcaggagg atctgacccg acttcaaagt tgggcagacg acaacggact taccttcaac      1500
     acttcaaagt gcaaagtagt ccatctgaga catgttgcag accatagtta taacttaggt      1560
     aactcccctc tagaagtttc ccaagtcgaa aaagatttag gagtgttggt accctatgac      1620
     ctgaaatcgt atgcgaactg tgacaaaaac gcctttcaag caaaccttgc actggtaaca      1680
     ttgaagcgca tttttggcca gtttgacggt agaaccttcc acataatctt caacagtttt      1740
     attcgtcccc atttagagta cggaaacata gtatttcctc cctccctcca aaaggataag      1800
     gacactctgg aacgtataca acgtcgagcc acgaaatcag ttcggggact caaattcaaa      1860
     ccttacgaag agcgcctcca atcacttaac ctttacccgt tagagtacag gcgtcttaga      1920
     ggtgaccttc ttatgactta cagtatcctt aatacttctg gtcatcccct taaacatctt      1980
     cttaagctta gtcataacac taacctmaga ggtaacaccc agaaattgga gaccctatat      2040
     agcagaacag actgcagaca caacttctac tccgttagag ttgtcaagtg ctggaattcg      2100
     ctgccgactg agctagtcca agcgacctcc caggagtcct ttaagaggaa acttgactta      2160
     ttcttaagga ctaaggataa catattatta tgatttacca aattcttttt ttccctctat      2220
     tatcgttcat atacctaggt ttttgcctgg aggtattggt gatccactgc tactagacac      2280
     ggaagcccgt taagcgaaag cttcttctat tccatcctca accatttgaa ccatttg         2337
//
ID   TAS_I     repbase; DNA; INV; 7128 BP.
CC   TAS_I DNA
XX
AC   Z29712;
XX
DT   13-MAR-1998 (Rel. 3.2, Created)
DT   13-MAR-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   Retrovirus-like element TAS; an internal sequence.
XX
KW   LTR retrotransposon; endogenous retrovirus; gag; pol; env;
KW   TAS; TAS_LTR; TAS_I.
XX
OS   Ascaris lumbricoides
CC   common roundworm.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda;
OC   Secernentea; Rhabditia; Ascaridida; Ascaridina; Ascaridoidea;
OC   Ascarididae; Ascaris.
XX
RN   [1]
RP   1-7128
RC   [1]  (bases 1 to 7128)
RA   Felder H., Herzceg A., de Chastonay Y., Aeby P., Tobler H.,
RA   Muller F.;
RT   "Tas, a retrotransposon from the parasitic nematode Ascaris
RT   lumbricoides";
RL   Gene 149 (2), 219-225 (1994)
RX   MEDLINE; 95047480.
XX
RN   [2]
RP   1-7128
RC   [2]  (bases 1 to 7128)
RA   Aeby P., Spicher A., de Chastonay Y., Muller F., Tobler H.;
RT   "Structure and genomic organization of proretrovirus-like elements
RT   partially eliminated from the somatic genome of Ascaris
RT   lumbricoides";
RL   EMBO J. 5 (12), 3353-3360 (1986)
RX   MEDLINE; 87133498.
XX
RN   [3]
RP   1-7128
RC   [3]  (bases 1 to 7128)
RA   Heinz F.H.;
RT   "Direct Submission";
RL   Submitted (04-JAN-1994) Felder H. F. Heinz, Institute of Zoology,
RL   University of Fribourg, Perolles, Fribourg, CH-1700, Switzerland
XX
CC   TAS has a strong structural similarity with retroviral proviruses 
CC   and related mobile elements.
CC   The element is flanked by long terminal repeats (reported in Repbase 
CC   as TAS_LTR) and contains three distinct regions encoding
CC   putative proteins typical for retroid elements. The first region
CC   encodes a putative Gag protein including a 'Leu zipper', a nucleic 
CC   acid binding motif, as well as an aspartic protease domain. 
CC   The second region contains an incomplete ORF with sequence 
CC   similarities to known retroviral reverse transcriptases (RT), 
CC   ribonucleases H and integrases. A third ORF, which is located 
CC   adjacent to the 3' LTR, might encode an env-like protein. 
CC   Based on amino-acid sequence analysis of the RT domain, Tas falls
CC   into a new subgroup of LTR-containing retrotransposons [1,2].
CC   Approximately 50 Tas copies are dispersed over approximately 20 
CC   different chromosomal sites. Their genomic distribution varies 
CC   between individuals, indicating that TAS elements are mobile 
CC   in the Ascaris genome [2].
XX
DR   GENBANK; Z29712; 103.0.
CC   Positions     253    7380  Accession No Z29712       GenBank (rel. 103.0)
XX
SQ   Sequence 7128 BP; 2239 A; 1674 C; 1556 G; 1659 T; 0 other;
     aaaacttggc gaccacggca ggatcagatt tttctccgga ttctgcaaat ttcggattct        60
     gcgaaagtta cctctgcgac tagttcatac tctttgattc tgctgaagat attcgctgag       120
     aaatggcccg acgcatgaaa gccgggctgg aacctatggt tcaagagtga aaacgatggt       180
     tggaaggatc ccgccaactg aggacgatgt cgacataaca caggaaagtt cttttcaaat       240
     taccgctttt ataaaacgta gagactgtct gcaccattgc ttgaaaaatg taatgcgcct       300
     catttcgcaa attgaaaata agcacgaaaa gtggcttgaa ttattggaca ctttaagtga       360
     cccgcgagca gcagaagcag agaataaggc gtacgaagac tacgctatgc agccagacag       420
     ctttctctat ctatgcgagc aagctaaaac cattgctgat caactaaacg ctaggatctc       480
     taatatcact gacgttctga agactttgca atcctcggtt tcgtcaccca ctccgctaat       540
     cgcgcaagtg tcctcgaatt tacaagcaat ctctgctcct tcgcctccag aacccatagg       600
     cagccacgtt gctctgcccc agatccaact cagaaaattt tctggaaacc ctaaagagtg       660
     gactggattc tgggaaacat ttaattctgc tgttggccac ttgccaaaaa ttcagtgctt       720
     gaactatctg ctttcactac ttgaaggccc agcagcaacc gtcgctcagg gctacgctat       780
     gagtgaaagc agctttgatt tggtggtaac tgcgctaaaa tcaaattacg gaaacccagc       840
     cgttataata gccagcttac acaccgaatt gcaaaacctt cctagtgaca atgggtccca       900
     actggtggca actgtacagg cactggaaag aatattaaga caacttgagc aagcaggcga       960
     aaatctcgac tcacctttgt tagtatttat aattgagcaa aagctctcgc agcgaataaa      1020
     aagacgcatt agtgaataca aggcgttaga tccagaatgg aacgtcgaaa aattacgggc      1080
     gaaacttcgc gaatttatga ccgcggagtt aatctacgca cagtcgcacg gaagagctca      1140
     gcaagtgaaa gctgttagca cgccgaggca gccgcaaatc aaaacatctt cccttctcgc      1200
     tcagcaaaaa caacaaaaaa agccgtcaaa accatgtgca ttctttggtg aatcacactg      1260
     gaatcgcgac tgcccttcgt acagcaccac agagaaaaga attcagcgag tgaataaact      1320
     tcaattgtgc acaaaatgtt tgaaaagggg acattcactg caagactgca aagcaatgca      1380
     acattgctac tactgccata atcgcaatca taactcactc ctatgcatgg agaggtgcaa      1440
     atcgcaagaa aaggggaaga atggtacaga ccagcccctt tcacctgaag aagtgattgc      1500
     agcaaatatg gcaagtggaa ataaagtact gctattctgt aaagaagtag tggtctccaa      1560
     ccctcaaaaa gcaaattgcc gaacgaaagc gttaatgttt tttgattcgg gcagtcaaaa      1620
     gtcgtacata acaacgcgct tagcgaatcg gctacggcta aacacaacac cgcaaaagct      1680
     gagcataagc acttttggtg attgtgcgcc gcaaattatc caatcaaatc gaactgttat      1740
     ttccgttcaa cttcagaacg gtacccgcaa ggctgtcaga gtaagcacaa ttaagcgaat      1800
     tactagcaac ctagaagtta ttggtgacaa cattgaagct cattttggtg acctgaagcc      1860
     atcagagctg ccgcgaaaaa ttcgttctcc agatattctg atcggtcatg actatttcag      1920
     cgactttatt ccgcttacag gaatcaaacg cctaggaaac ggctacgaat taattcccac      1980
     taaagttggc tatattttat cgtccaaaca ggccgaaaag aaagaagcag ccccggcagt      2040
     ggtgtgtatt gaaaaaaaaa atgccagatg acgctaggga agaaatggaa tttgcgaacc      2100
     aacattcctc agaacaggtt gagcaaatct ccaactattg gaatgttgag ctccttggta      2160
     ttcgagattc accaaccgag catgaagacc aacaagcaat ggacatgttc aaggaaacgg      2220
     tgaagagaat cgacggtcgc tattcagtga gcctcccatt cagagactct gtgccgcaaa      2280
     ttccacagaa ttttggccta gcatatggtc gattgctttc aacttggaag cgtttgcaga      2340
     atgatcgcga gcttctcgaa aaatatgacg caatcttttc tcagcagaag gactgtggag      2400
     tcatcgaaga agtacctcag gaggaactaa aacccacatt caatattgtc cactatttgc      2460
     cacatcaagc agtaattaat ccccataaaa cgactacaaa gatttgagta gttttcgatg      2520
     gttcttccaa atcgagagga actaaaagca tcaacgaagc aattatgaga ggaccagttt      2580
     tactcccgaa tttaggtggt ttactgcttc gatttcgttc aatgcctatt gcaattatag      2640
     gagatttaga aaaggctttt ctacaagtgg ctctcaataa accagatcga gatgcggctc      2700
     gctttctatg gctgtctgat atcaactcat cgccatctca cagcaaccta taggtctttc      2760
     gctttgcacg agtcccgttt ggactcaacg caagtccctt cctccccacg gcaacaatta      2820
     aaacgcatct agattcgtac ggtgacgtag cattagccga agaaatttgg aagaacattt      2880
     atgtggataa cgtgctgatc agtgcacgta cgacaaaaga ggccttcaac aaattcgaga      2940
     gcataaagaa actattcgaa gacgcacgaa tgaacatacg cgaatttctg agcaacgacg      3000
     caaccttcaa caaaacaatt ccggaaaggg accgtcacga agcaactaac gcgaaactgc      3060
     taggactgcg atggaacact acagcagact atattcagtg gaaagtaagt ccaccgaagc      3120
     agccgatgat gaccaaacgg caactattgt cctatatcgc tgctcaatac gatcccaccg      3180
     gacacatccc tcctttgttc actccattaa aagtaattct acaagatcta ctgagaaaga      3240
     atcaaaagtg ggacgagagg ttacccgaaa atataaccaa gcagattgac agcatctgcg      3300
     gtgagtggaa tgaccgcaca attgaagtac cacgattcgt cataaagagg caagctgctc      3360
     tgcaacttca ctgtttcacg gatgcatcga agacagcgta cgcttcagcc atttacatcc      3420
     gaacagaaat gaattcagaa attgaatgtc atctactaat atgcaaaact cgacttgagc      3480
     cactcaaagg atccaccatt cctcatctgg aacttatggg agctcttatt ggaacgaggc      3540
     tgcttgaata cacctcacag cagctgcaac tggaaagcgc cgacaagtat atttggactg      3600
     acagtcagtg cactttacaa cgaattcgct ccagtgacgt gcatcagaaa gatcgattcg      3660
     tggaaaatcg cctaaaagaa attcggaaaa cggatgccag atttgaaaac ggatcgtccc      3720
     ttcagattcc aatccggccg atattcgtac gagaggtagt gacctcgacg atctgatcaa      3780
     caacaaaata tggtggcatg gaccacattg gctcctctat tctagtgagc agtggccaca      3840
     attggtaaat cacactgcta ggtcagaaga caaagacagt gagcagtggc ccagaagacc      3900
     acttagaaac agaagcaaca acagcgaata cgcacatggc gtgtgaaata tatgatcgtt      3960
     catcgactat catcaacgct atgcgtttca gccaatggtc tcgtctactg cgaacgacag      4020
     catgggtatt gcgtgcagtt gcctgcttca aaggaaattg ccccgaaaag ggatcgttaa      4080
     aaggaaacga aatatctcga gctgaagaac tactgattaa gcaagctcaa agagaggaca      4140
     tttgtctgca agagagagaa aaatggaacg ctcatctcga caaagatggc ttgtggaaat      4200
     gcgaaggtag aatgaaatat gcttcatcac cactattaat ctacttgcct gcagacaacc      4260
     gcataactca gttgcttatt ttgcacatcc acgaggagct tttgcacgct gggatctctt      4320
     caattctcgc gaagatgcgt gaggcgtact ggatccctcg tggccgtcag gccataaaac      4380
     gagctctcaa caattgcttt cattgccgac gatggaagtc taagcccttt cagatgcccc      4440
     caatgccacc ctatccgccg gaacgagtat ctaagcatcc tcctttcgaa aatacaggtg      4500
     tcgactatat aggaccattt acgatacgtt cgatgaaaag gatcacacaa aacgatggat      4560
     ctgtttattc acttgtttct caactagagc tgtacatctc gaagtcgcct ctgacctatc      4620
     cggaccaggt ttcattcagt gtttacgttc gctttgtttc cagaagagga cttcctaaga      4680
     gaatgctttc ggataacggc acacaattcg tctgggctcg atctgtactc acctctgtgt      4740
     ctaaagtgca ccagacggac aacgcaattc tcgactattg cgctgcacac aacattcagt      4800
     ggtcatttat tactccactc gtgccatggc aaggtggcat ctatgagaga atggtcggtc      4860
     ccgtaaaagg cagtatgaag aaaacaattg gatggaaaag gctgacgcaa gaagaacttc      4920
     aaacactgac gacggatatc gaagcagtgg taaactgccg tccgattatc cccctcacat      4980
     cggagaatac gacagttcta cgaccagtcg attttctgct gccacacggt aattcttcac      5040
     cgggagtatt cagaagcctg gagaatgatg cacgagaacc cacatatcga gaccctagtg      5100
     acatccacca aaagcttttg aaatattggg aagaaacgag agcaaaactt gataactttt      5160
     ggacgatatg gcgagaagaa tatctcacga tgtgaaacaa cgatatgaaa caactcacaa      5220
     acagccaatc agtactgaaa agagaccgcc tgaggtcaac gaaatagtgc tgctcaacga      5280
     gtcaccatgt cctcgcggca cctggccgct cggagttatc gaacccctac atcccgaacc      5340
     gtcaaaggtg agaacaacaa ctattcgtct ttcaaacggc aagaaggtgc aaagaacagt      5400
     caatagtctc ttcccacttg aaattcgagc caaagcagat gcaataacag caacggcagc      5460
     aacagtaatc tccacgactg ttatccgaga aacactcaat aaagcggtca caagacgaaa      5520
     acatacccta cccttctacc tactgccttg cttccttatc tcggggttac taactttagt      5580
     cgtcgggagc gccgcagcca gcggaactca aggtatacat ctaccaattc cagaaactca      5640
     gaactgtaca gtagaacggt tcagccatct tacgacgaca agagtaagcg ttttcgaaag      5700
     aaaattgaaa cgagtggaag ctatcagttg tttccagatc actcataaga actgcactcg      5760
     agcgtttctc cgattcagta tgtacgaaac tcttgaagaa ccaattatat cagccgtcac      5820
     agctcaagca tgtgaagaga ttagaaacac caagcgcttc agcgggctcc agctcgaaag      5880
     gatcggtgca aaaaggtgga agagctctca accgtcaacc gcttcttacg ctatctttgg      5940
     tgaaagatgt actgctactg tgaactacga gttggatgaa ggctacgtgt tgattggcga      6000
     tgatgtgcat atcgattctt gtctggcaaa cgtcacggct tgcaaagcat ccaccggaaa      6060
     gtgcatggct gatggtcgaa ttgttctatg ggataaaaaa atgctcgttg aacagtgcgc      6120
     atggcaccga gtgggcacat atctcgcaca ggttacagag aagaggatca tcgttgacaa      6180
     acttcaagct tctttcgttc cactcgaggc atttgacgaa agctggacgc aagcagaaca      6240
     gtgtcaactt cagtcgtttg cacctatgca aaacggtatt ctcatcacat ttgatgactg      6300
     gaaacaacag gatgtcaccg actggtaccg aaaggcaaga gttcacgcac cgaacatatc      6360
     ctctgttgaa cttggaacaa gattcgatcg agagaacgcg aagtttcaat acgcttctga      6420
     taggtggctg cagcagttta aactgcacct aaataagtat gccgaaacac aatgtcaaac      6480
     gagaaacaat ttccttatcc ttattcggag catcagtcga agtgaccctt cgatggcagc      6540
     taagttgttg cttcatcggg gcgacgtgtc ggcaatacga gaaggcgaca aactaattgt      6600
     gtttccacat aacggaatca ttgaaaagag caacgaggga acccacggtg gggaaattga      6660
     gaacgaactc gtattctggt cagccaccct tcaagacacg tcaatacaac aagctcaagc      6720
     gcagatcgat ctactcaaat cacgaagtgc tcgttggggc ttgagagcaa aaccgtcaac      6780
     gttctctgat agccgcacgg ctctctcaga cttcgggaac gaaattgaaa cgcttgcaga      6840
     agaagctaac aacaatatcc aacatatctt tgaagcgttc aagtattggg aagctttact      6900
     catcgttatt gcgatcatcg cagtatctat aataattact tttgcaacaa tcaaatgcat      6960
     ggccgtcgtg aagaaacttc gaaagaaagg cgaaatatcc aacccgacag ttattttcat      7020
     caaggaaaat gcagcggaaa caactgtaat cgaaagcctt cagcaacaca tcgatcggat      7080
     gcggttcgaa tcagttatca ttgggcgcaa ggatcgtcgc ctcgggag                   7128
//
ID   TAS_LTR   repbase; DNA; INV; 252 BP.
CC   TAS_LTR DNA
XX
AC   Z29712;
XX
DT   13-MAR-1998 (Rel. 3.2, Created)
DT   13-MAR-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   Long terminal repeat from retrovirus-like element TAS.
XX
KW   endogenous retrovirus; gag; pol; env; LTR; TAS; TAS_I; TAS_LTR.
XX
OS   Ascaris lumbricoides
CC   common roundworm.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Nematoda;
OC   Secernentea; Rhabditia; Ascaridida; Ascaridina; Ascaridoidea;
OC   Ascarididae; Ascaris.
XX
RN   [1]
RP   1-252
RC   [1]  (bases 1 to 252)
RA   Felder H., Herzceg A., de Chastonay Y., Aeby P., Tobler H.,
RA   Muller F.;
RT   "Tas, a retrotransposon from the parasitic nematode Ascaris
RT   lumbricoides";
RL   Gene 149 (2), 219-225 (1994)
RX   MEDLINE; 95047480.
XX
RN   [2]
RP   1-252
RC   [2]  (bases 1 to 252)
RA   Aeby P., Spicher A., de Chastonay Y., Muller F., Tobler H.;
RT   "Structure and genomic organization of proretrovirus-like elements
RT   partially eliminated from the somatic genome of Ascaris
RT   lumbricoides";
RL   EMBO J. 5 (12), 3353-3360 (1986)
RX   MEDLINE; 87133498.
XX
RN   [3]
RP   1-252
RC   [3]  (bases 1 to 252)
RA   Heinz F.H.;
RT   "Direct Submission";
RL   Submitted (04-JAN-1994) Felder H. F. Heinz, Institute of Zoology,
RL   University of Fribourg, Perolles, Fribourg, CH-1700, Switzerland
XX
CC   TAS internal sequence is reported in Repbase as TAS_I.
XX
DR   GENBANK; Z29712; 103.0.
CC   Positions       1     252  Accession No Z29712       GenBank (rel. 103.0)
XX
SQ   Sequence 252 BP; 66 A; 57 C; 44 G; 85 T; 0 other;
     tgtcgcgtca aatggcgaaa cattcaaaac aaaattccag cgaaatgatc aagaagattt        60
     cgctgagatt ttgtgagaaa ggaaacataa aatcctcact tgtgagagga ttttatgtct       120
     cctcctttgt tatcattctt tgtaaacgta tttaactctc gtcgtctctt agtctacgcc       180
     tctttcaaaa ggtgcttagg ggacctccct cttcttcttt cccacatatt tttgccgcgt       240
     ttttacgcga ca                                                           252
//
ID   ZEBEDEE   repbase; DNA; INV; 3256 BP.
CC   ZEBEDEE DNA
XX
AC   Z86116;
XX
DT   13-MAR-1998 (Rel. 3.2, Created)
DT   13-MAR-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   A.aegypti DNA, copia-like transposable element Zebedee.
XX
KW   copia-like retrotransposon; endonuclease; integrase; reverse
KW   transcriptase; LTR; ZEBEDEE.
XX
OS   Aedes aegypti
CC   yellow fever mosquito.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Aedes.
XX
RN   [1]
RP   1-3256
RC   [1]  (bases 1 to 3256)
RA   Warren A.M., Hughes M.A., Crampton J.M.;
RT   "Zebedee: a novel copia-Ty1 family of transposable elements in the
RT   genome of the medically important mosquito Aedes aegypti";
RL   Mol. Gen. Genet. 254 (5), 505-513 (1997)
RX   MEDLINE; 97340935.
XX
RN   [2]
RP   1-3256
RC   [2]  (bases 1 to 3256)
RA   Crampton J.M.;
RT   "Direct Submission";
RL   Submitted (11-MAR-1997) Crampton J. M., Liverpool School of
RL   Tropical Medicine, Molecular Biology and Immunology, Pembroke
RL   Place, Liverpool, UK, L3 5QA
XX
CC   Zebedee appears to be flanked by 22bp direct repeat sequences. 
CC   A single open reading frame (ORF) of 972 amino acids has the 
CC   coding potential for a polyprotein with homology corresponding 
CC   to the conserved amino acid motifs of Long Terminal Repeat 
CC   retrotransposon protease, integrase and reverse transcriptase.
CC   The Zebedee family appears to have a low copy 
CC   number in different strains of Ae.aegypti. Transcripts of 
CC   the elements have been detected in culture mosquito cells. 
CC   Despite the lack of a gag homologue or the LTR hallmarks of 
CC   previously characterised copia-Ty1 RTPs, phylogenetic analyses
CC   place Zebedee within this group, showing considerable homology 
CC   to copia from D.melanogaster [1].
XX
DR   GENBANK; Z86116; 103.0.
CC   Positions     424    3679  Accession No Z86116       GenBank (rel. 103.0)
XX
SQ   Sequence 3256 BP; 875 A; 760 C; 876 G; 745 T; 0 other;
     cttcgttgtc tcggtcatat cagtgaaagt ggaatggcct ctctggtgcg tgagaacctg        60
     gcccttggtg tgcgtttcaa gccggagaag attaagttct gcgatgtgtg tgtcccggaa       120
     aaacacagcc gggacccgtt cgatggtgca agagaccggg cgaccagatc gttggagcgt       180
     atccattcgg acgtgtgtgg gccgattgag cctgcatcct gggaaggtca tcgctatctg       240
     gtctcgttca ttgatgacta gggtaacggt cgtattttgg accccctaag gaagtgattt       300
     tagttttttg tcccaattaa ttaattgcac agcgtaacca agtcaaagaa catgccaaaa       360
     tgtagagaaa aacttctcct acgagataaa aatgccccta cgatcatgaa ggatccaaaa       420
     aatgtcgaaa ataattgaat tgtgaagaac tgtttctcat tattttggac acaccaatat       480
     attttggacc cctggaattt ttttatcgtt tggcgaaaag tccacgacac tggttgtata       540
     atatgctcgc ccatagtcta atcaatcgat tgacattgga aaaccgaaga aattctacgc       600
     ttttagtgca gaaatttgaa aaacgttctt gtttacattt aaaaaaattc tgacggcttc       660
     aatttctgtg tgtaacgttt tgtaacggtt gcatggatga accgattaaa ttaaattaat       720
     ttcagataaa ataaacacaa tttctatgta taaacggttg atgcaaatgc ggaatagtcc       780
     tatctttcca aatggcatgc gaattgagtt gaaggaagga aattgaagcg atggcgactg       840
     cggcttgtgg cacgaagatt tcaaaactga ccgtagacca gggacgtgag tacttctcaa       900
     ccagccagaa gaactactac aaagcgaagg ggattcaggt cgagccaact atagcctact       960
     ctccgcaaca aaatgaagtg gcggagagat tcaacaggac cctaatcgag aaggtacgta      1020
     ccatgcaaat tgaatctcat gctccaaaat cgttctggtg tgaagcggtg ctgtcggccg      1080
     tgttcctgat caatcggagc ccaacctcgg ctgttttaag aaacgttacg cctgctgaac      1140
     tatggtacgg tcggaagcca agtctggaga aggcgcgcgt ttttggttgt caagtctatg      1200
     cctggatacc gatcaacgga ggaagaagtc ggacacgaag agtcgacagc tgatcatggt      1260
     tggttacgcg cccaatggct accggctgtg ggacaaggac gagaggagaa tcgtaattgc      1320
     tcgtgacgtc aagttcaatg aaaactactt tccgtgggcc aacaatgcaa gagatcgcgc      1380
     ggaagagaga ctggtggtac ccttggtcta cgagcaagag ggggaagaac atgccaagga      1440
     agccattgat gaggacgcca tccaacctga tgatgcggcg gtcggtccgt tcgacccgtc      1500
     cgaccacgaa ggcgaacttc taaccgagga tgataccgat gacgaagctg cgacggaact      1560
     agccaaccct gcgctccctt cgcaatcaga tctggacatg tcctccggcc ctagaggcga      1620
     gcagtccgag aggcgcagga aacgggagcg ccgttttccg ggtaagttcc ttgattatct      1680
     tactggattt agagctagtg ctgttggtcc tccctcccct tcagacgttc ccgaaacata      1740
     cgatgaaatc cgtacccgtg aggaatcgtg ccctctggaa ccaggcggtg caggaacgag      1800
     ctccgttcaa tgaaggccaa acgatgtctg gaagagtggt gggcgtgccc ccgccggcgt      1860
     gaagctactc aaaacgaaat ggtcttccga ctcaaggaga acgaggctgg acgatcggtt      1920
     cggcataagg cgcgactggt ggtcaagggt ttccttcaac gtcctggaat cgatttcgag      1980
     gacacgttcg caccagtggc taagctgtct accgtgcgag tggtgctagc cgttgcggtt      2040
     catcatggtt tcaaggtgca ccagatagac gtaagcacag cgttcctcca cggtatgctg      2100
     aaggaagatt tgttcatgga agaacctgaa gacgtgaagg cgaagcccgg cagtgtgtgc      2160
     aagctgcaga ggtcgttgta cgggttgaag caagcaccac gttgctggaa cgaaaggttc      2220
     aactcagcgc ttctgaagct gggattcagc agatcccacc gtgcctactg tctctacgtg      2280
     tgcaacactg aaggggatga agttttctta gtgctgtacg tcgacgacct cctgatagcc      2340
     ggacggaaca ttcgaacaat tcagaagctg aagcgccgtc tttccgatga gttctaaatg      2400
     accgattgcg gcgacgaggt ttttctttgg ggatgcggct cgcttacaat ccggagcatg      2460
     gtgacctgaa gttgacccaa gaaacagctg ccacgaagat cttggagaag ttcgctatga      2520
     ctgaatgtta ccccgccaag aatccgatgg agaaaggatt gcagcctgat gtatcaaatg      2580
     ctgtgtgcgc ccggatttgt gctacccggt cagctacttg ggaaggttcc agcaatcatc      2640
     aacgaacaat cactggcagg cgctgaagcg agttgtcaga tacctctaag ggacggctac      2700
     cctgggacta ctctacaaga gaaacgagaa cagcagaccg ctcgtcggat acgtggacgc      2760
     cgactgggca tccgatgcgg aagatcggaa tcggtaacag gtttcctgtt caaagtctac      2820
     ggcatcgacg gtatcctggg ctagtcggaa gcagccaaca gtctccatat cgtcaagcga      2880
     ggccgaatac gtcgcgctga gtgcagccgt atcggaagct atctggttgt ccggaatttt      2940
     agaagacctc aactgcaaga agctgacgga ccctgtatca atatacgaag acaaccgtgg      3000
     ctgcataggg ctgcccaaaa atgctgaatc gaagcgcatc aagcacgtaa atatcaagca      3060
     ccactttatc aaggaccatg tggctgccgg gaccatcaaa atcgaaccga tcagcacccc      3120
     cgagcagcaa gcagacattt tcacgaaggc gttagatgtc acccggttcc aatccctcag      3180
     gagcaagatc ggggtcaccg attgagagag ggtgttagaa atctagcact cgctgactgc      3240
     tggatttaca tcacag                                                      3256
//
ID   SINE_CP1  repbase; DNA; INV; 321 BP.
CC   SINE_CP1 DNA
XX
AC   X79507;
XX
DT   13-MAR-1998 (Rel. 3.2, Created)
DT   13-MAR-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   C.pallidivittatus Cp1 (SINE transposable element), clone pCp125.
XX
KW   SINE; transposable element; CPCP1125; SINE_CP1.
XX
OS   Chironomus pallidivittatus
CC   Chironomus pallidivittatus.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Diptera; Nematocera; Chironomoidea;
OC   Chironomidae; Chironomus.
XX
RN   [1]
RP   1-321
RC   [1]  (bases 1 to 321)
RA   He H., Rovira C., Recco-Pimentel S., Liao C., Edstrom J.E.;
RT   "Polymorphic SINEs in chironomids with DNA derived from the R2
RT   insertion site";
RL   Unpublished
XX
RN   [2]
RP   1-321
RC   [2]  (bases 1 to 321)
RA   Rovira C.R.;
RT   "Direct Submission";
RL   Submitted (31-MAY-1994) C.R. Rovira, University of Lund, Dept of
RL   Molecular Genetics, Solvegatan 29, 223 62 Lund, SWEDEN
XX
RN   [3]
RP   1-321
RC   [3]  (bases 1 to 321)
RA   He H., Rovira C., Recco-Pimentel S., Liao C., Edstrom J.E.;
RT   "Polymorphic SINEs in chironomids with DNA derived from the R2
RT   insertion site";
RL   J. Mol. Biol. 245 (1), 34-42 (1995)
RX   MEDLINE; 95123644.
XX
DR   GENBANK; X79507; 103.0.
CC   Positions       1     321  Accession No X79507       GenBank (rel. 103.0)
XX
SQ   Sequence 321 BP; 91 A; 63 C; 67 G; 100 T; 0 other;
     aagcttgctc tgctaacaga acgacttatt ctcattttga ataagcatat tatctctcta        60
     agcgagcgaa tgctttacaa ccgttgaaaa aagagtggtt catatatatt ggcattctgc       120
     caatgccaat ggcaaagccc gatagctcag tggtctgagc acttgaccgg caatcgagag       180
     gtgcgaggtt cgattcccgc tcgggaagag tcattgggtg aattactttt ttttcaactt       240
     tttcttttaa actatttctc tctaagcgaa gaaatgctta ttcaaaatga gaataagtcg       300
     ttctgttagc agagcaagct t                                                 321
//
ID   TFP3      repbase; DNA; INV; 831 BP.
CC   TFP3 DNA
XX
AC   M29093;
XX
DT   30-APR-1998 (Rel. 3.2, Created)
DT   30-APR-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   Autographa californica nuclear polyhedrosis virus TFP3/2
DE   transposable element derived from Trichoplusia ni after infection.
XX
KW   nonautonomous DNA transposon; TIRs; TTAA superfamily; TFP3.
XX
OS   Trichoplusia ni
CC   Trichoplusia ni.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Lepidoptera; Noctuoidea; Noctuidae;
OC   Trichoplusia.
XX
RN   [1]
RP   1-831
RC   [1]  (bases 1 to 920)
RA   Wang H., Fraser M.J.Jr., Cary L.C.;
RT   "Transposon mutagenesis of Baculoviruses: analysis of tfp3
RT   Lepidopteran transposon insertions at the FP locus of nuclear
RT   polyhedrosis viruses";
RL   Gene 81, 97-108 (1989)
RX   MEDLINE; 90034190.
XX
CC   TTAA target site duplication.
XX
DR   GENBANK; M29093; 103.0.
CC   Positions       1     831  Accession No M29093       GenBank (rel. 103.0)
XX
SQ   Sequence 831 BP; 237 A; 181 C; 161 G; 252 T; 0 other;
     cccattcgct gccgatctaa agagtaacaa tattacccag ttgccgccat actgtactat        60
     gcagcccgcc catcggcggt cccggcatct taattatgta tttttgcccg cccattggcg       120
     ttttcggcat gaaactgcag attccgacat gaatcgtttg atatcgcatc caaaaaaatc       180
     ctagaaagtg ctattaattt gacttaagat aacgcgaacc gataatataa gccttcattg       240
     cttttatcag ccagcccttt gtattggccc ggccgaccgg cagaagtgcc ggccggctgt       300
     ctgggacgtt ttaggccaaa attaaccctg ccgaagggtt ttttttaagt aagagacgtc       360
     caaatgtttt ttcttagtat tttttcacaa cttaatcaga actttctgtt gatcaatgtt       420
     tcgaaggttt tacaccttta tgtgaaatag atgataacac tttattttta tacacgaaac       480
     tcatgcttaa gaagtagcga gcagagaagt ttttacataa cttaataata gccgttagtc       540
     gttctaaaat ttacaaaagt ttgggacctc tgatataaaa tcttcggccc gcccaacggc       600
     gggctcggca tgacagtata gaattgcctt ttttcaaaac ttcaaatatc agcaggccat       660
     ttgagttgca aatcaatatt aataaaacaa atcattacac attatctcat tactttctga       720
     cgttatttcg taaagttatt gcagtttaaa atcaaaccgc ccatgggcgg tctcggcgtg       780
     aaagttaaaa aaatttttgc ccgccgatgg gcgggctcgg cactgaatgg g                831
//
ID   HECTOR    repbase; DNA; INV; 638 BP.
CC   HECTOR DNA
XX
AC   U17152;
XX
DT   03-SEP-1998 (Rel. 3.2, Created)
DT   03-SEP-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   Transposase from DNA transposon Hector element, partial cds.
XX
KW   DNA transposon HECTOR; transposase; HAT superfamily; HECTOR.
XX
OS   Musca vetustissima
CC   Musca vetustissima.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha;
OC   Muscoidea; Muscidae; Musca.
XX
RN   [1]
RP   1-638
RC   [1]  (bases 1 to 638)
RA   Warren W.D., Atkinson P.W., O'Brochta D.A.;
RT   "The Australian bushfly Musca vetustissima contains a sequence
RT   related to transposons of the hobo, Ac and Tam3 family";
RL   Gene 154 (1), 133-134 (1995)
RX   MEDLINE; 95172395.
XX
RN   [2]
RP   1-638
RC   [2]  (bases 1 to 638)
RA   Warren W.D.;
RT   "Direct Submission";
RL   Submitted (11-NOV-1994) William D. Warren, Molecular Genetic
RL   Resource Service, CAMBIA, GPO Box 3200, Canberra ACT 2601,
RL   Australia
XX
DR   GENBANK; U17152; 105.0.
CC   Positions       1     638  Accession No U17152       GenBank (rel. 105.0)
XX
SQ   Sequence 638 BP; 225 A; 102 C; 133 G; 178 T; 0 other;
     caatgggtcg tcgaggattg tagacctttt tcagctgtca atggatccgg ctttgaaaag        60
     ctagtacagc atttcataaa tcttggtgct aagtatgggg aaaatattga cattaaagat       120
     ttgcttccca gccaaagaac aatatcgcgg aatatccaaa agacggctga agaaacaaaa       180
     aatggaatta aaaatgaaat tgcagaagtt gtgcgaggtg gtggtgcgtc cgctacaata       240
     gatatgtgga cggataacta tgtgaagagg aattttttag gtgtcacatt acattaccaa       300
     tcaaaatcaa aatttgttga tatggtttta ggtatgaaat cgatggattt ccaaagactt       360
     aaatctttat ttaatgagtt tggtgtgcag gatctgggac caataaagtt tgtaactgac       420
     agaggatcaa acatattgaa agccctggaa caaaacacac gactgaactg tagcagtcat       480
     ctattttcaa atgttcttga aaagtctttc gaagatactg cagaactcaa agaattatta       540
     aaggcatgcg caaaattagt taaatatttt aagaaagcta atttgcagca caaattgcct       600
     acatcattaa aaagtccatg cccgacccga tggaactc                               638
//
ID   IKIRARA1  repbase; DNA; INV; 610 BP.
CC   IKIRARA1 DNA
XX
AC   U55049;
XX
DT   15-SEP-1998 (Rel. 3.2, Created)
DT   15-SEP-1998 (Rel. 3.2, Last updated, Version 1)
XX
DE   Anopheles gambiae transposon Ikirara1.
XX
KW   .
XX
OS   Anopheles gambiae
CC   African malaria mosquito strain=G3.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Diptera; Nematocera; Culicoidea;
OC   Culicidae; Anopheles.
XX
RN   [1]
RP   1-610
RC   [1]  (bases 1 to 610)
RA   Romans P.A., Bhattacharyya R.K., Colavita A.C.;
RT   "Ikirara, a novel transposon family from the malaria vector
RT   mosquito, Anopheles gambiae";
RL   Insect Mol. Biol. (1998) In press
XX
RN   [2]
RP   1-610
RC   [2]  (bases 1 to 610)
RA   Romans P.A.;
RT   "Direct Submission";
RL   Submitted (15-APR-1996) Zoology, University of Toronto, 25 Harbord
RL   Street, Toronto, Ontario M5S 3G5, Canada
XX
DR   GENBANK; U55049; 107.0.
CC   Positions       1     610  Accession No U55049       GenBank (rel. 107.0)
XX
SQ   Sequence 610 BP; 181 A; 122 C; 123 G; 184 T; 0 other;
     cagggtttca cactttatct caagaccgcg ggaccccttc ccgaatctgt cttagccaaa        60
     gccaagactg cggtatgatg cttgaaaacg ttgatgatac ctgaattcat cggatgcaat       120
     gctgaatctg cggcacattt ctcgaaacac actggtccgc gccgaggaca tgcggtcgaa       180
     tattttttta cacggataac ctttgtgtac atcagtgtac tgaaaacagt taattatttt       240
     ttcgtgtttt taccagaaaa gattatttaa acagttcaaa ctaatttcta aacacttgta       300
     aatattttaa ttaaacaaat atgcattcac tcattttatt aaattgtctt tttttggtaa       360
     aaaaacgaaa aggataattg agtgtttcta atagactgat gtacacaaag gttatccgtg       420
     taaaaaaata ttcgaccgca tgtcctcggc gcggaccagt gtgtttcgag aaatgtgccg       480
     cagattcagc attgcatccg atgaattcag gtatcatcaa cgttttcaag catcataccg       540
     cagtcttggc tttggctaag acagattcgg gaaggggtcc cgcggtcttg agataaagtg       600
     tgaaaccctg                                                              610
//
ID   YOYOLTR   repbase; DNA; INV; 316 BP.
CC   YOYOLTR DNA
XX
AC   U60529;
XX
DT   11-JAN-1999 (Rel. 3.3, Created)
DT   11-JAN-1999 (Rel. 3.3, Last updated, Version 1)
XX
DE   LTR from YOYO retrotransposon.
XX
KW   LTR; retrotransposon; Gypsy superfamily; YOYO; YOYOI; YOYOLTR.
XX
OS   Ceratitis capitata
CC   Mediterranean fruit fly.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha;
OC   Tephritoidea; Tephritidae; Ceratitis.
XX
RN   [1]
RP   1-316
RC   [1]  (bases 1 to 7698)
RA   Zhou Q., Haymer D.S.;
RT   "Gypsy-like retrotransposon in the Medfly";
RL   Unpublished
XX
RN   [2]
RP   1-316
RC   [2]  (bases 1 to 7698)
RA   Zhou Q., Haymer D.S.;
RT   "Direct Submission";
RL   Submitted (11-JUN-1996) Genetics & Molecular Biology, University of
RL   Hawaii, 1960 East West Rd, Honolulu, HI 96822, USA
XX
DR   GENBANK; U60529; 109.0.
CC   Positions       1     316  Accession No U60529       GenBank (rel. 109.0)
XX
SQ   Sequence 316 BP; 113 A; 72 C; 51 G; 80 T; 0 other;
     agttaacgct gctaacattt aaaaactcca aacatatgtt tcccacggta cggaaacgca        60
     cccacagcaa caatacaggt aaaatgctga tgccatgtct gccgcgccgg atcaacgtat       120
     catatagccc gtacacgcgc aaccatttcg ccaacaccgt aaactgtcac ctgtgcccgc       180
     aacgtgatac agatgcttaa tgttaaggaa gtaaaaattg taattcagtc ctaagttaga       240
     attcaataaa gtaacatgta ctgaaagcac agaaaaaatt attttttttc tataacttaa       300
     cagtaattaa gttaac                                                       316
//
ID   YOYOI     repbase; DNA; INV; 7065 BP.
CC   YOYOI DNA
XX
AC   U60529;
XX
DT   11-JAN-1999 (Rel. 3.3, Created)
DT   11-JAN-1999 (Rel. 3.3, Last updated, Version 1)
XX
DE   Ceratitis capitata yoyo retrotransposon gag-like, pol-like and
DE   env-like genes, complete cds.
XX
KW   internal portion of LTR retrotransposon; Gypsy superfamily; 
KW   gag; pol; env; YOYO; YOYOLTR; YOYOI.
XX
OS   Ceratitis capitata
CC   Mediterranean fruit fly.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha;
OC   Tephritoidea; Tephritidae; Ceratitis.
XX
RN   [1]
RP   1-7065
RC   [1]  (bases 1 to 7698)
RA   Zhou Q., Haymer D.S.;
RT   "Gypsy-like retrotransposon in the Medfly";
RL   Unpublished
XX
RN   [2]
RP   1-7065
RC   [2]  (bases 1 to 7698)
RA   Zhou Q., Haymer D.S.;
RT   "Direct Submission";
RL   Submitted (11-JUN-1996) Genetics & Molecular Biology, University of
RL   Hawaii, 1960 East West Rd, Honolulu, HI 96822, USA
XX
DR   GENBANK; U60529; 109.0.
CC   Positions     317    7381  Accession No U60529       GenBank (rel. 109.0)
XX
SQ   Sequence 7065 BP; 2883 A; 1431 C; 1034 G; 1717 T; 0 other;
     tggcgcccaa cgctccagtc gcggacggta tacgtagtgc ataccttcga aacgtagtgc        60
     atcacgcgcg aacctaagtg aacagtgcgc gtacgtaaag gactctaccg tcaaagcaga       120
     agcgacagga cgaaccaaaa cgggtaaact tcggtggaag ataacccaaa cccaccagaa       180
     ggcgcatcac cccggaacca tagtagcgga agcaaactgg ataattccca atgcgtcgtg       240
     ggattttaac gtaagaaata gattaagaca taaatataga taacgttgtg aaaaaaaaag       300
     aaaagttaaa aaaagtacta attaaaatta agataaggaa aattatattt aaaaaggaaa       360
     agagaaaatt tgtgaaaaaa agaaaagtta aaaaagtact aattaaaatc aagataagga       420
     aaatattatt tgtgaaaaaa aaagaaaaat taaaaatact gattaaaatc agggaataag       480
     gatcataata aaacaatttt aaagcataca agataatatt aaaggcttgt acatccttaa       540
     ataaacaaac cctaaagctt tcggcttata acataaccat atctctgcga ttcactccat       600
     aaagggggac cctccagaga atattaaaat aaaaagacag ttaattaaaa atatttaaaa       660
     aaataaaatt aaattaaata aaatggcaca taacgacatt attagaccct cgatgcttgc       720
     atccgcacct agagcagcag ctccccccct acagcctaat ccactacagc ctaatccacc       780
     tacttcggca aacgccacac cagaacttag aaacataatt cgggatttaa tgagagaaat       840
     attggccacc gaggaagcca atattgtaag aacatcaacg caaacaatga ccgaccaaat       900
     aatcgaagaa cggtttaggg acaatttgac agacatggac aaagttcgag acgtggtaag       960
     atccctacgc gagtttggcg gcaatccagc ggaatacagc agctggaaaa aaagtgtcga      1020
     gcgtatcctc aaaatatacg aacctaacat gggttcacca aaatattttg ggatactcaa      1080
     cgttatccgc aacaaaattg tgggtagcgc tgatgccgct ctagaatcct ataatacacc      1140
     cttaaattgg aaagcgattt ccaaatgcct cacaatgcac tatgccgaca aaagagattt      1200
     gagcactctc gaataccaga tgacttgctt actccaaggc aggagaacag tgcatgagtt      1260
     ttacgcggag gtatactcac acctttcctt aattctaaat aaaattgcct gcatggacat      1320
     caatgaagaa gccatgcgta tccttaccca cacatatcgc gataaggcac ttgatacctt      1380
     cgtcggggga ttgtcaggcg atctatcaag gctacttggt atgaaagagc cagccgatct      1440
     acctgaagca ctacatctgt gcatcaagtt agaaaatcaa aattttagaa caatacacgc      1500
     gaataaccaa tacagtttac caagaaaacc taatttacca ctcttaccat taggaatgca      1560
     tcatcaacat aaacccccaa taccacagag aaacataaat cacaacaacc agccctttta      1620
     tccacaatta gcccatatac cccaagcaat aaatccaatt aatcgttttt cccagcatcc      1680
     ccaataccgt caacaccaat atcaatacca tccccaatat caataccaac ctcaatatca      1740
     acagcaacaa cgctttagac ccaatcaatt cttcaatact ccaccaaggc ctatacaacc      1800
     aaaaccacca atcccaatgg aagttgacga atcattacaa actaggaacg ttaactacat      1860
     gaacagacca aacaaaatct tcgccggaaa aagacccata gtaccttcaa accaaatacg      1920
     acaacccttc aaacaaagta gaatcaataa cataatagca gtctcagcac ctcaagacga      1980
     agaacagaca tctaaggatt actatgacca atactcagct caagataata attcaaacga      2040
     taatattcta gaagaaaacg aatacgaatt ttccgatata cattttttag attaacgaac      2100
     tccacgttac catactttca atgtaaagat agtaacggag atattttaaa atttttgatt      2160
     gatacagggt caaataaaaa ttatattcag ccaaacctag taaaaaactc aattcccaat      2220
     aatgatattt tttatgccac ctcagttgga ggaaaaatca aaataaccca ccacactttc      2280
     attgaccttt tcggactaaa agacgaaaat ctcaaatttt tcgtactacc aacattaaaa      2340
     tccttccacg gaattctcgg taacgacagc ttaaaacagt tagaagccat aatttttaca      2400
     tcaaaaaacc acatgctaat aaaaaataag attaaaatag caattaaaca acaaaatgcc      2460
     acatcagtaa acaacgtcgg aataagaaca acgcacctta cagactcaca agcagaaaaa      2520
     cttcgaaatc tatgtcaatt gtacccaaaa ctttttttgg aaccagacga aaaattaaca      2580
     tacacaacag tagtaaaagc aacaatcaga acaactacag acaacccagt ttattctcga      2640
     tgttaccctt atccaatgtc tttaaaatcc gaagtcgaaa gacaaatcaa caaacttctg      2700
     gaagatggca tcataagacc atctcgctct ccttataatt ctcctgtatg gatagtagac      2760
     aaaaaaccag actctttagg aaataaacaa taccgacttg ttatagacta tcgaaaatta      2820
     aactctgtta caattgcaga ccgttatccc attcccgaaa ttaatgaagt cctttcccac      2880
     ttaggaagta atacattttt ttcagtcatc gatttaaaaa gtggttttca tcaaattccc      2940
     ttaaaaaact cggacataga aaagaccgct ttctccataa ataatgaaaa atatgaattt      3000
     accaggctgc catttggctt aaaaaatgcc ccttcaatat tccaaaggac gttagacgac      3060
     attttaagag actacatagg acaatgctgt tacgtataca ttgacgatat aattatattt      3120
     agtagaaatg aaaaagaaca ttcaacccac ctaaaaaata ttttcactac actagaaaaa      3180
     gctaatatga aggtacagtt agacaaatgc aaatttttcg aaaaagaggt agaattccta      3240
     ggattcatag taacaccgga aggaataaaa acaaaccctt caaaaataga ggctattcaa      3300
     aatttcccaa ttccacgaaa cctcaaagaa ctcagatcct ttttaggtct gtcgggttat      3360
     taccgtcgct ttgtcaaaga ctatgcgaag ctcgctaaac ccctgacagc ccttttaaga      3420
     ggggaggaag gacgtgtgtc caaaagtcaa tcagctagag cgcacataac actaggcgac      3480
     gaagcacttg cagctttaga aaagataaaa aacgtgttaa tttcaagaga tgttatgctg      3540
     acctacccca acttaaataa agattttgag cttacaactg atgcttccaa ttacgcaata      3600
     ggcgctgttc tttcgcaaga agaccgacca atcactttca tctctaggac tcttacgaaa      3660
     acagaggaaa attacgcggc taacgagaaa gaaatgctcg ccatcatatg ggcattgaag      3720
     tccctgcgaa attacctcta cggatcagca aaagttaaaa tctttacgga tcatcaaccc      3780
     ttaacatatg cactaagcaa caaaaacaat aatagcaaaa tgaaacgatg gaaggcaatc      3840
     ctcgaagaat ataactatga actaaaatat aaaccaggca aaactaatgt agtagcagac      3900
     ggactatcta gaccaccaca gcaggaccaa attaattcct tgacaccgac tcaacatagc      3960
     gacgaaagct caccgcaaaa cctcattcct tatacggacg ccccgattaa tgctttcaaa      4020
     aaccagttat tcctaaaaac cgcagacacc tcgtcctacc aattcttaat acccttccca      4080
     acctaccata ggcatatcat tgaagaaccc gaatatacag aagaaaattt aacaaatcat      4140
     ctaaagcgct atttaaatcc ttcagttacc aatgcaatta ttacagacga ccatatttta      4200
     ggtagaatac aaaacataca tccaattcac ttcagcagat acagaataaa atatacgcga      4260
     aaaatagtaa aagacttagt acgagaatct gaacaggaat ccgaaatagt taaagaacac      4320
     aaaagagcac acagaagtgc aacggaaaac aaagcccaaa ttttagaaaa tttttatttt      4380
     cctcaaatga attcaaagat taataaaata attaagcaat gtaaaatatg tctcgaaaac      4440
     aaatatgaaa ggcacccttc aaaactagtt ctaaaagcaa ccccagttcc taattatccc      4500
     ggacatatag ttcatatcga tatttaccac accaataata gagtaatcct tacagccgta      4560
     gacaaatttt cgaagtacgc gcaagctaga atagtcaaat caagagcaac agaagacata      4620
     aaactaccct tacaagatct actcacatcc ttcggaattc cagaaaaaat cgtcattgac      4680
     aacgaaaagt cattaaactc atcctccata gtatttatgt tagaaaacca atacagtatt      4740
     gaaattttta aaacacctcc ttatactagt tcagtaaacg gtcaagtaga gcgttttcac      4800
     tcaaccctta ccgaaataat gcgttgtaca aaagcagaga acacccacaa tagttttgaa      4860
     gaattactaa atagatcaat atgcaaatat aaccactcaa ttcattcaac cacgaaaaag      4920
     aaacccattg aaatcttctt tggtagaagc gtttatagtg acccatcgtt attagaaaag      4980
     gatagactcg acaatattaa aaaaatagtt aacaaacagg aaaaagacct taccttccac      5040
     aacaaaaaga ggacagaagt aaaagcatat tccagcaatg acattatcta tgtcaaaatc      5100
     aataaaagaa taggcaataa actcacaccc agatataaaa aggaaatagt tctcgaagac      5160
     aatggtaata cagtcacaac aaaatcagga aggtcggtgc ataaaagtca tatcaaggct      5220
     tcataacaag aaccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaactata ataataataa      5280
     taaaactaat aaaataaaat ctaaactaaa taattttata atataattaa ggcaattaaa      5340
     caaagaaaat actaaaggaa aaagccatta agtaagaaat aaataaaatt tagcaaatag      5400
     gagataaagg aaattagttt taaaatcaat cgaccaaaat gccataggcg gtgcgatttt      5460
     agattaatta atagcctaga aatcattaac caatcgaatc gtcattaaag gacatatata      5520
     caaattaaat ttttcagtct cttcatctgc atgtcctatg cagacataca aatccacgac      5580
     tattcctcat cccatttaat aaccattgac aatggctact ccaaaatcaa ggacggtacc      5640
     ttaaatttta tccatatcat tgacattcaa gcctatcgga acgttttaga aaatattact      5700
     gacatgatag aaaagagtta cccaccagaa aatcccatat atcctacctt acaacacgaa      5760
     gctcaacaag cattagaaat gttggaaatt gtggaaccca tccagaatcc tagaattaga      5820
     agatcctttg atatccttgg tactgcttgg aaatacctag caggaagccc tgatcacgac      5880
     gacttgaata tgattaataa caacttagat aaacttataa caaataataa caatcaaatt      5940
     tttataaata atgctgttaa aaaccaaata aataaattaa ctgaaataac taataacata      6000
     ctacaatcga ttaaaaatga taacatgatt gcaaacgaaa tagcgttaaa tttacaaaat      6060
     agattaagat tgattaaaga agaaatcata aatataaaat atgccataca atgggctaga      6120
     ctaggaatcg ttaatactat cattttaaat aaaaaggaaa ttgaaacatt tgtaaaagaa      6180
     tttaataaag aaaatatgcc cttcaatact gtagaggagg ctttagaatt agcagatatt      6240
     aatgtattaa gtaattcaac aacaatttta tatattttga aaataccctt aacgacaagg      6300
     gaagtttata ataattatat aataaaatct gtaataagaa atgatgttat gataaatttg      6360
     aaatttaaca atgtacttaa aaacaaaaat acaatatatg gaattaaaaa ccaatgtaaa      6420
     aaatataata aagttagtat ttgtaagcaa gaagaattgt tagatttaag taatgatttt      6480
     tgtatatcga aattaataaa aagccaaaac tcttcttgtc acatggtaaa ctctcaccac      6540
     ataccaagac acgagctaat cacgcccgga atcattttcc tcaacgacta tcatggtaac      6600
     atcgttatga atgacaacat ccgaatcatg aacggcactt acatcattaa tttcagaaac      6660
     gcatcgatta ccatcaatga gcgaacatat aagaactttg aatcaccagt aatgaaagtg      6720
     atgccagcaa ttgcgcaacc aacaccaata gaagaaagca ttacaaagct tctctccctg      6780
     gaagcgctca gcgagctaaa cgtaaattac cccgtagaaa tacattcact gcaaatagaa      6840
     agaaccgtga atcgaatttc ttcaggaatt actcttctta tggtaatcat cctgatggcc      6900
     agcgccataa actattttca taaaaaaacg aagtcgacaa aaccaacaga atccagctct      6960
     gaggacaacc agcttcaaga aatcatcact gaagctccta ttcctgaaac aaggaccttt      7020
     caaatttttc agacgctcga ggacaagcgt ttttgaagag ggagg                      7065
//
ID   IFP2      repbase; DNA; INV; 2475 BP.
CC   IFP2 DNA
XX
AC   J04364;
XX
DT   13-MAY-1999 (Rel. 3.3, Created)
DT   13-MAY-1999 (Rel. 3.3, Last updated, Version 1)
XX
DE   Trichoplusia ni transposon IFP2.
XX
KW   autonomous DNA transposon; TTAA superfamily; IFP2.
XX
OS   Trichoplusia ni
CC   Trichoplusia ni.
OC   Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda;
OC   Tracheata; Insecta; Pterygota; Lepidoptera; Noctuoidea; Noctuidae;
OC   Trichoplusia.
XX
RN   [1]
RP   1-2475
RC   [1]  (bases 1 to 2475)
RA   Cary L.C., Goebel M., Corsaro B.G., Wang H.G., Rosen E.,
RA   Fraser M.J.;
RT   "Transposon mutagenesis of baculoviruses: analysis of Trichoplusia
RT   ni transposon IFP2 insertions within the FP-locus of nuclear
RT   polyhedrosis viruses";
RL   Virology 172 (1), 156-169 (1989)
RX   MEDLINE; 89370297.
XX
CC   TTAA target site duplication. Transposase encoded by IFP2
CC   transposon has been found in human (LOOPER transposon in
CC   humrep.ref).
XX
DR   GENBANK; J04364; 103.0.
CC   Positions       1    2475  Accession No J04364       GenBank (rel. 103.0)
XX
SQ   Sequence 2475 BP; 802 A; 418 C; 496 G; 759 T; 0 other;
     ccctagaaag atagtctgcg taaaattgac gcatgcattc ttgaaatatt gctctctctt        60
     tctaaatagc gcgaatccgt cgctgtttgc aatttaggac atctcagtcg ccgcttggag       120
     ctcggctgag gcgtgcttgt caatgcggta agtgtcactg attttgaact ataacgaccg       180
     cgtgagtcaa aatgacgcat gattatcttt tacgtgactt ttaagattta actcatacga       240
     taattaatat tgttatttca tgttctactt acgtgataac ttattatata tatattttct       300
     tgttatagat atcgtgacta atatataata aaatgggatg ttctttagac gatgagcata       360
     tcctctctgc tcttctgcaa ggcgatgacg agcttgttgg tgaggattct gacagtgaaa       420
     tatcagatca cgtaagtgaa gacgtccaga gcgatacaga agaagcgttt atagatgagg       480
     tacatgaagt gtcagccaac gtcaagcgta gtgaaatatt agacgaacaa aatgttattg       540
     aacaaccagg ttcttcattg gcttctaaca gaatcttgac cttgccacag aggactatta       600
     gaggtaagaa taaacattgt tggtcaactt caaagtccac gagcggtagc cgagtctctg       660
     cactgaacat tgtcagatct caaagaggtc cgacgcgtat gtgccgcaat atatatgacc       720
     cacttttatg cttcaaacta ttttttactg atgagataat ttcgcaaatt gtaaaatgga       780
     caaatgctga gatatcattg aaacgtcggg aatctatgac aggtgctaca tttcgtgaca       840
     cgaatgaaga tgaaatctat gctttctttg gtattctggt aatgacagca gtgagaaaag       900
     ataaccacat gtccacagat gacctctttg gatcgatctt tgtcaatgtg tacgtctctg       960
     taatgagtct gtggatcgtt ttggattttt tgatacgatg tcttagaatg gatgacaaaa      1020
     gtatacggcc cacacttcga gaaaacgatg tatttactcc tgttagaaaa atatgggatc      1080
     tctttatcca tcagtgcata caaaattaca ctccaggggc tcatttgacc atagatgaac      1140
     agttacttgg ttttagagga cggtgtccgt ttaggatgta tatcccaaac aagccaagta      1200
     agtatggaat aaaatcctca tgatgtgtga cagtggtacg aagtatatga taaatggaat      1260
     gccttatttg ggaagaggaa cacagaccaa cggagtacca ctcggtgaat actacgtgaa      1320
     ggagttatca aagcctgtgc acggtagttg tcgtaatatt acgtgtgaca attggttcac      1380
     ctcaatccct ttggcaaaaa acttactaca agaaccgtat aagttaacca ttgtgggaac      1440
     cgtgcgatca aacaaacgcg agataccgga agtactgaaa aacagtcgct ccaggccagt      1500
     gggaacatcg atgttttgtt ttgacggacc ccttactctc gtctcatata aaccgaagcc      1560
     agctaagatg gtatacttat tatcatcttg tgatgaggat gcttctatca acgaaagtac      1620
     cggtaaaccg caaatggtta tgtattataa tcaaactaaa ggcggagtgg acacgctaga      1680
     ccaaatgtgt tctgtgatga cctgcagtag gaagacgaat aggtggccta tggcattatt      1740
     gtacggaatg ataaacattg cctgcataaa ttcttttatt atatacagcc ataatgtcag      1800
     tagcaaggga gaaaaggttc aaagtcgcaa aaaatttatg agaaaccttt acatgagcct      1860
     gacgtcatcg tttatgcgta accgtttaga agctcctact ttgaagagat atttgcgcga      1920
     taatatctct aatattttgc caaatgaagt gcctggtaca tcagatgaca gtactgaaga      1980
     gccagtaatg aaaaaacgta cttactgtac ttactgcccc tctaaaataa ggcgaaaggc      2040
     aaatgcatcg tgcaaaaaat gcaaaaaagt tatttgtcga gagcataata ttgatatgtg      2100
     ccaaagttgt ttctggactg actaataagt ataatttgtt tctattatgt ataagttaag      2160
     ctaattactt attttataat acaacatgac tgtttttaaa gtacaaaata agtttatttt      2220
     tgtaaaagag agaatgttta aaagttttgt tactttagaa gaaattttga gtttttgttt      2280
     ttttttaata aataaataaa cataaataaa ttgtttgttg aatttattat tagtatgtaa      2340
     gtgtaaatat aataaaactt aatatctatt caaattaata aataaacctc gatatacaga      2400
     ccgataaaaa cacatgcgtc aattttacgc atgattatct ttaacgtacg tcacaatatg      2460
     attatctttc taggg                                                       2475
//
ID   BM1B      repbase; DNA; INV; 177 BP.
CC   BM1B DNA
XX
AC   ;
XX
DT   09-JUN-1999 (Rel. 3.3, Created)
DT   09-JUN-1999 (Rel. 3.3, Last updated, Version 1)
XX
DE   BM1B repetitive DNA element - a consensus.
XX
KW   BM1; BM1B.
XX
OS   Bombyx mori (consensus)
CC   consensus
OC   Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
OC   Pterygota; Neoptera; Holometabola; Lepidoptera; Ditrysia;
OC   Bombycoidea; Bombycidae.
XX
RN   [1]
RP   1-177
RC   [1]  (bases 1 to 177)
RA   Jurka J.
RT   ;
RL   Direct submission (May 1999)
XX
CC   3' similar to BM1. Putative SINE element.
XX
CC   [1] (Consensus)
XX
SQ   Sequence 177 BP; 41 A; 47 C; 49 G; 40 T; 0 other;
     ccacggtgtt tcccgagcgc tatgacatgt ccttcttcaa acgaggcttg tggagagtat        60
     taagcggtag gcagcggctt ggctctgccc ctggcattgc tgaagtccat gggcgacggt       120
     aaccactcac catcaggtgg gccgtatgct cgtctgccta caaaggcaat aaaaaaa          177
//
ID   L1BM      repbase; DNA; INV; 3187 BP.
CC   L1BM DNA
XX
AC   AB002279;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Bombyx mori L1Bm DNA, non-LTR retrotransposon.
XX
KW   non-LTR retrotransposon; repeat sequence; L1Bm; reverse
KW   transcriptase; pseudogene; L1BM.
XX
OS   Bombyx mori
CC   Bombyx mori (strain:Kinshu  showa F1 hybrid) 5th inster larva silk
CC   gland DNA.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Lepidoptera; Bombycoidea; Bombycidae; Bombyx.
XX
RN   [1]
RP   1-3187
RC   [1]  (bases 1 to 3187)
RA   Ichimura S.;
RT   "Direct Submission";
RL   Submitted (27-MAR-1997) to the DDBJ/EMBL/GenBank databases. Sachiko
RL   Ichimura, National Institute of Radiological Sciences, Division of
RL   Biology and Oncology; 4-9-1, Anagawa, Inage-ku, Chiba-shi, Chiba
RL   263, Japan (E-mail:ichimura@nirs.go.jp., Tel:043-251-2111,
RL   Fax:043-255-6497)
XX
DR   GENBANK; AB002279; 110.0.
CC   Positions       1    3187  Accession No AB002279     GenBank (rel. 110.0)
XX
SQ   Sequence 3187 BP; 802 A; 951 C; 702 G; 732 T; 0 other;
     cgcaagcttg catgcctgca gtccccacgg tctcggcgtg gaaaaagccg ctgccgtata        60
     cgaaggcggg aacggaaacc gcacccccgc ccccgctcgt gacacgcccc gcgcccgcgt       120
     agttccgcgt cggaactcgt attcaaaaat cattcgaatt ttcgaaatat tcatctttct       180
     tccgtccccc gcaaccctct gccgtcaacg acttcgcgct cgtgcgtgac ttcgtcaccg       240
     tgtctaagct gattaaaaaa agcaactgaa agtcgataat cgaatgttgc acatttaaaa       300
     cggtcaactt cgaccgtctg cgatcgttcg cagacgcgat aacgtaggtc ggtaaccccc       360
     aaaaagatcc tcataggttg tccacaagtc caccatttga aaaaagtttc actcaaacca       420
     gaacagcggc tcgcggccgc tttcgatcac atggacgtct acgagtccgt gtcgcgtacg       480
     tgaaggtcct atatcagttc gaagtaccta ttaaattaaa acggaaattt catactttaa       540
     ttataaaatc ttaccggtaa ccaatggcgc aaaaaggtag agaaaaaccg tattccctta       600
     cccctattat tttgtgcgtt tactaggtag gtattcaagg cgtaattttg caatttaatt       660
     cgttagcatt ctataatgct aacggactcg cgcggcaacg gattccaaat ttttgaattc       720
     ctccgcgata atcttgtaga tattctatta gtgcaggaaa cctgtctgaa gccctcgcgt       780
     cgcgacccga aagtcgcgaa ttacgtcatg gttaggaatg acagactcac cgcctccaaa       840
     ggcgggactg ccatttacta taggcgggcc ctgcacgttg tccctctcga tactccctcg       900
     ctctcacata tcgaggcgtc agtgtgccgt atctcgctga cgggacacca gccgatcgtc       960
     atcgcatccg tttatctccc cccggacaag ccccttctga gcagtgacat cgagtcactg      1020
     ttcggcatgg gagactctgt catcctggca ggcgatttaa attgccacca cactaggtgg      1080
     aactgccatc gtacaaacgt taacggtagg cgtctcgacg cgtttataga cgacctcacc      1140
     tttgaaatag tcggtccccc aactccaaca tgttattcgt ataacatcgc gctccgtccg      1200
     agcactatag acctggcatt gcttaggaac gtaactctgc gcttgcgttc catcgaaggc      1260
     aatgtcagag ctcgactcag accaccgacc tgtcgttatg cagctcggtc gccctcacaa      1320
     cccagtcact gttacgagga ccatggtgga ttggaataag ctgggcacgt gcctagccga      1380
     cgccgctccg ccaatcctcc cttacggccc ggattcgaat ccatcccccg aggacaccgt      1440
     cgaatccata aacatcatta ccgatcacat ctcttccgcg atcattagat cttctaaaga      1500
     agtcgatgtg gaggacagct tccaaccgca tcagactgtc ccccgatctt aggaatctct      1560
     taagagttag gaacgcggca atctgggcct acgatcgtct tcccacgcat tcaaaccgga      1620
     ttcagatgcg tcgtctacaa cgcgaagtcc actcccgctt aagcgacgcg cgtaacgata      1680
     attggcatag ttatttagaa caactcgcgc cctcccacca agcatactgg cgactagcta      1740
     ggactcttaa atccgaaact accgctacta tgcctcccct cttacgccct tcaggccaac      1800
     caccggcatt cgatgacgat tacaaagctg agctgctggc ctaactgctg caagagcagt      1860
     gcaccaccag ccctcgacac gcggaccccg aacacaccga gttagtcgac agggaggtcg      1920
     agcgcagagc ttccctgccg ccctcggacg cgttaccccc cattaccacg gacgaagtta      1980
     gagacgcgat ccacaacctc caacctagga aggcaccagg ctccgacggc atccacaacc      2040
     gcgcgctaaa aattttgcca gtccaactga tagcaatgtt ggctacaatt ttaaatgccg      2100
     ctatgacgca ctgcatcttt cccgcggtgt ggaaagaagc ggacggtatc ggtatacata      2160
     agccgggcaa accgagaaac gaaacttcta gttaccgtcc gattagtctc ctctcgacga      2220
     taggaaaaat ttacgaacgt ctccttagga aacgcctctg ggattttgtt taccgcgaac      2280
     aaaattctca ttgacgaaca gttcggattc cgctcaaaac actcgtgcgt acaacaagtg      2340
     caccgcctca cgagcacatt ctgataggac taaataggcg taaacaaatc cgaccggcgc      2400
     ctcttcttcg acatcgcgag gcgttcgaca aagtctggca caacggttta atttacaaac      2460
     tgtacaacat gggagtgcca gacagactcg tgctcatcat acgagacttc ttgtcgaacc      2520
     gttcgtttcg atatcgagta gagggaactc gttctcgtcc ccgtcaactg actgccggag      2580
     tcccgcaagc tccgcgctgt ccccgttatt atttagtttg tatatcaatg atataccccg      2640
     gtctccggag acccatctag cgctcttcgc cgatgacacg gctatctact actcgtgtag      2700
     gaagatgtcg ctgcttcatc ggcgactcca gatcgcagta gccaccatgg gacagtggtt      2760
     ccggaagtgg cgaatagaca tcaagcccac gaaaagcgca gcggtgctct tcaaaagggg      2820
     tcgccctccg aacatcactt cgagcatccc cactccgtag taggcgcgca aatacctccg      2880
     ccgttagtcc catcactctc tttggccagc ccataccgtg ggtctcgaag gttaaatatc      2940
     taggcgtcac cctcgacaga gggatgacat tccgtcccca tataaaaacg gtacgcgacc      3000
     gcgccgcgtt tattctagga cgactctatc caatgctttg tagtcgaagc aaactgtccc      3060
     tccgcaataa ggtaactctc tacaaaactt gtatacgccc cgtcatgacg tatgcaagcg      3120
     tagtgttcgc tcactcagcc cgcacccact tgaaatccct tcaggttatt caatcacgat      3180
     tctgcag                                                                3187
//
ID   R1A_DS    repbase; DNA; INV; 2232 BP.
CC   R1A_DS DNA
XX
AC   AF015489;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Dugesiella sp. retrotransposon R1 reverse transcriptase gene,
DE   partial cds.
XX
KW   R1A_DS.
XX
OS   Dugesiella sp.
CC   Dugesiella sp.
OC   Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Araneae;
OC   Mygalomorphae; Theraphosidae; Dugesiella.
XX
RN   [1]
RP   1-2232
RC   [1]  (bases 1 to 2232)
RA   Burke W.D., Malik H.S., Eickbush T.H.;
RT   "R1 and R2 Provide An Estimate for the Age and Stability of
RT   Retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-2232
RC   [2]  (bases 1 to 2232)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (22-JUL-1997) Biology, Univ. of Rochester, Hutchison
RL   Hall, Rochester, NY 14627, USA
XX
DR   GENBANK; AF015489; 110.0.
CC   Positions       1    2232  Accession No AF015489     GenBank (rel. 110.0)
XX
SQ   Sequence 2232 BP; 538 A; 548 C; 595 G; 551 T; 0 other;
     tacgcgtttg cgcaggttga gatcgatgct gtctgtaagt ctcttccgcg gaagaaggct        60
     cccggagagg accgtttcac ctacgaaata gttcgaggac tgcatgaagc tttgccaagg       120
     ctgttgggtg cactgttcaa cagatgtctt tctttgaagg tattcccgaa tgagtggaaa       180
     aagggtgaac tagctttgct agcgaagatt gggaaagacg taaaccgtcc aaacgcgtac       240
     aggcctattt gccttctccc ggctctggga aagatctatg aaaagttgat cgtcaataga       300
     ctctggcatt ttgtgacgat caacaaagct ctatcagata accagttcgg cttcgtccca       360
     tatcgctcca ctactatggc tattgataaa cttttgggga cattccgcca ctttgaggat       420
     gaacgctgcg tcacgctttt ggtctccctg gatatctcaa acgcttttaa ctcggtctgg       480
     tatccgagtg ttttgagata cctacggcaa aacaggttcc ctggtaacct catagacata       540
     atcgtagatt acttccggga ccgcacgatc agcgttcgtt ttgggagcac tcgtgttacc       600
     cgcaatgttg ttagaggctg cccgcaggga tcggttctgg gacctcttct ctggaacatg       660
     gtcatagacc ctgtcctccg agagaggctt cccggaggtg ccatactcca agcctatgca       720
     gacgatctgg tccttgcggt tcccggtaaa agcagagtag acctactagg caaagcggtt       780
     gactgcctta gtacggtccg tgagtgggca ggacgaagca aactggcgct ggacacggct       840
     aaatccaaag ccatggtctt gaacagcaag taccgttcgc ttgatcttag ccaccactta       900
     gtagggggca ttaaggtgga aaaagagttg aagtacttgg gtctgatcat tgactcggac       960
     ttaaacttcc agtcgcactt taaggcggtc agtgcacgag tcaacagatt cgtgcacaac      1020
     ttaagatcta tgaccgttcg agcaaatggc atttgcccag atgccataag aacctattac      1080
     catcaggttc tgcgacagtg gatgagctac ggggcagcca tatggttccc cgggcacatt      1140
     aaaaagttct atgatcgttt caatgcgatc caacgatcgg ctctgattct tgcgactaga      1200
     gcgtaccctc gtgccctact acggcattac aggcgatcag tggcatcttg ccaggatctc      1260
     caaatgtgga ggtctgtgta caacacgcaa ctcctgcact tgcagaaggt gactatggtg      1320
     gatggaagaa gctaccatcc cacgatgttt cagcagaggg cgaataggtt cagcatccat      1380
     ccagggaaat ggatagctat tgaatggtcg aacttcggtt ctccgagcac ggtctcggac      1440
     tcagataaac tggctcgcca ccagatctat actgacgggt cgaaaagtga atcagggact      1500
     ggtgctgcgt ttgtggtgtt tcggaacggc gagttgtgga tgagcagaag ctacaagatg      1560
     actgcgagta acaccagcag tcaggccgag attttggcta tttggaaggc gttgcaatgg      1620
     ctgcttgcgg atggtgtcgg cattaagagc tgtgcagtca ttactgacag ccaatcgtcg      1680
     ttacaggccc tagccaatcc ttcttgtgat tggctattag taatgcgggc aaaggcagcc      1740
     tatcggcagc tgctgcgaaa tggagttgca gtccgtttct tttggaccaa aggacacgcg      1800
     acttgcgagg gcaataaaat cgccgacagt gcggcaagag aagcctcggc ttcgggactc      1860
     tcgatcgagg tcccccttcc gcactcatac ttcaaatccg tgacagccaa gatggcctac      1920
     cgcctttggg agcagcggtg gcgcgcctcc aatggctcca gtgcgacgca tttgttcata      1980
     gaggtaccta cctctaagag ttggagtaac tgctcggaaa tgactcaagt tctgactaag      2040
     catgcgcagt accccgagta cttgcacaga cgtggagtta ttaattctcc aaggtgtgta      2100
     tgcggcgaga tgggctcttt ggaccactac ctcgccgcat gcccggaaac cctttgtttc      2160
     cgacagaagc tcacgtcgcg ttgcagtaca tacgcggacc taccgcgatt gtcaggattt      2220
     cctctaattt ag                                                          2232
//
ID   R1B_DS    repbase; DNA; INV; 1467 BP.
CC   R1B_DS DNA
XX
AC   AF015813;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Dugesiella sp. retrotransposon R1 reverse transcriptase gene,
DE   partial cds.
XX
KW   R1B_DS.
XX
OS   Dugesiella sp.
CC   Dugesiella sp.
OC   Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Araneae;
OC   Mygalomorphae; Theraphosidae; Dugesiella.
XX
RN   [1]
RP   1-1467
RC   [1]  (bases 1 to 1467)
RA   Burke W.D., Malik H.S., Eickbush T.H.;
RT   "R1 and R2 Provide an Estimate of the Age and Stability of
RT   Retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-1467
RC   [2]  (bases 1 to 1467)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
DR   GENBANK; AF015813; 110.0.
CC   Positions       1    1467  Accession No AF015813     GenBank (rel. 110.0)
XX
SQ   Sequence 1467 BP; 464 A; 325 C; 376 G; 302 T; 0 other;
     gcatacgcgg atgacctgct ggttctaatt ggcggtaaca acagagatcg actaaaagaa        60
     gacgtaagct ccatcttcac agatatcaac gattgggccc tggctaacaa actaagtatc       120
     aacaaagaaa aaacaagggc catttggtta ccggggagag atcaaggact actcctacgc       180
     aatgtaaaac tccctgaggt gaaattagaa cagcatgtaa aatatctagg gatcacctac       240
     agctctgatg gcacattcaa ggagcaccag cgaagaatag acagcaagat aaggaagcta       300
     aacaataaaa taagatcaat caggatcgga aatcgtggat taccaggtga aaagatgaga       360
     agaatatata agacggtgat cgagaaaatt atatcatatg gagccaacac ttggacaaaa       420
     gcacttggaa gtgtagagaa gaagaaactg aacagcctac aacgaaccat gttgttaagc       480
     gtaacagagg cataccgtac aacttcaact gaagccatgc aggtcatcgc gaatataaca       540
     cctttagatc tgattcttcg agcagagagt aagagggcgg acattctgga gtgtgggggg       600
     agcgccacag tctcgggcag gccgataggt gcttcaggga ttgagatgcg gccgcacaag       660
     tttgcgaccc atcccaagaa ctggacgcgt gtcggctggg ccgagtggca cgatcgggat       720
     gactatattc tgcagatcta tacggatgga tctaagactt ccgatggtac gggggctgcc       780
     ttcgtggtcc tggacagggg caggcaaatt ttctctgccg gattctctct gtccaagcat       840
     catacccatt accaggcaga ggcagtggca attttgaagg ccacgatgtg gttcgcagag       900
     gaatgccaag ggaataaagt tgctattatt tcagacagcc agtcagcact aaaagcccta       960
     tatcgcaccc aggaagtttc tcccaccatt cgagacatta aaagaaccat cacaacaatc      1020
     aaaagacaag gaagacaaat cgatctttat tggacgaaag gtcacgcggg tcaagctggg      1080
     aatgaaatgg cagacagagc ggcgaaggag gcagttattt caggtcaacg atacgtcatg      1140
     ccgcgaccgg tttcctgggt caaggcactg atcaaaaaag aaactctgag agaatgggcc      1200
     acaaggtggg ccggctctga caagggacga cacacacaca acatcatctc tgccccgggg      1260
     tttaaggagt ggatcttctc caaagaaatc actcaaatct taacgaatca cggtaggaca      1320
     ccttcgtaca tgcatcgctt tggtttaaca agttctccac tctgctcctg tggcggggtg      1380
     ggggactggg aacattactt ctttttttgc agatcaacag aagcagtagc cggagtgtcc      1440
     gcagattaca gaacctacaa caactag                                          1467
//
ID   R2_LP     repbase; DNA; INV; 4495 BP.
CC   R2_LP DNA
XX
AC   AF015814;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Limulus polyphemus retrotransposon R2, complete sequence.
XX
KW   R2_LP.
XX
OS   Limulus polyphemus
CC   Atlantic horseshoe crab.
OC   Eukaryota; Metazoa; Arthropoda; Chelicerata; Merostomata;
OC   Xiphosura; Limulidae; Limulus.
XX
RN   [1]
RP   1-4495
RC   [1]  (bases 1 to 4495)
RA   Burke W.D., Malik H.S., Lathe W.C. III, Eickbush T.H.;
RT   "Are retrotransposons long-term hitchhikers?";
RL   Nature 392 (6672), 141-142 (1998)
RX   MEDLINE; 98175715.
XX
RN   [2]
RP   1-4495
RC   [2]  (bases 1 to 4495)
RA   Burke W.D., Malik H.S., Jones J.P., Eickbush T.H.;
RT   "The domain structure and retrotransposition mechanism of R2
RT   elements are conserved throughout arthropods";
RL   Mol. Biol. Evol. 16 (4), 502-511 (1999)
RX   MEDLINE; 99261661.
XX
RN   [3]
RP   1-4495
RC   [3]  (bases 1 to 4495)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
RN   [4]
RP   1-4495
RC   [4]  (bases 1 to 4495)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (09-SEP-1998) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
RL   REMARK    Sequence update by submitter
XX
DR   GENBANK; AF015814; 110.0.
CC   Positions       1    4495  Accession No AF015814     GenBank (rel. 110.0)
XX
SQ   Sequence 4495 BP; 1207 A; 1078 C; 1146 G; 1064 T; 0 other;
     tgggaggaga cccaaactat cctaggatgg ggcggaaccg accatatgag ccatattaac        60
     attgcccaca ctatcctctg gaggtacctc ctcgtggtac ggctggatat aggtaaatcc       120
     tgtaaccaaa tcctccaacc cgtgaaggag aacactaaaa cccatatagt ggcctcgcca       180
     accactatat gtccaacggc aggagaagct atctcccgga tgggaaggaa aaccctaaac       240
     cgtgatggga acttaccggc cccatcagct attgggtacc cggtagggac ttgcaaccct       300
     accctgtatt tgcattttat agggaaccgg tcggccctat atcagagtag accgtttatt       360
     aaatatgggt gaaaatatta acagtaaaag ctatggtttg gcgtccgtgt ggtgccaggg       420
     cggcggccaa acccgagcta cttggcacca actggggatg gtagcttccg agcgattccc       480
     tggcgacgtg ggaccgatcg acgatggagt ccaaacatcc ggaatagagg aattgagaaa       540
     tacctattcc accaccggct cacataccca aggtgaaccc ggtgcaacta gagtacaacc       600
     tatctgtggc ggtaggtgcc gaaccactca ggtgacgggc ttgtttattg atgtctccct       660
     acgagacacg aattgtgaca aatccactcc ggtggacaat tacccgatct atgaacctgt       720
     taccgatatt agacaagaaa ataaagaact gacaacgcct agagcttcag gcagcatgtc       780
     tgtaagtatc cagtcatcga gcgtgactga gggcgaaatt gataataact ctgaaactga       840
     ggaattgacg gatatatgtt tggctacgct agagcttcag gcagcacgtc tgtaagcatc       900
     cagtcatcga gcatgactga gggcgaaact aacgaaaggg ccacgcctag agcttcagac       960
     agctcgtctg taagcatcca gtcatcgtgc gtgactgagg gtgaatgtct acctcctaca      1020
     gacaactgca acccgtctgt agagaaccag ttaccgtgcg taactgaggg taggtttgaa      1080
     cgggtaggct cactggtgac ggtgcgtctg cccttcagaa aggtggcatg tgacttgtgt      1140
     tctaaagagt tcttgacata ttcgaagttt gcagtccacc aggcaaactt ccacaattca      1200
     gaaactcagg catgctgcac atattgcggt aaaagtgatg gcaatcatca ctctatagcc      1260
     tgtcacgttc cgaaatgtcc ctggcggcga actgttacgt ttgctgcgaa cttaagcaat      1320
     ttcttgtgtg atctttgcaa tgatagtttt aagaccaaat cagggctttc gcaacataag      1380
     cgtcataagc atccttgttc aaggaatgct gaacgcatcc tttctcttgg agtcaggacg      1440
     ccgtcggccc gccctcgcca ggtagtgtgg tccgaagaag aaacacgaac cctccgggaa      1500
     gtggaagtag tgtattcggg ccaaaagaac attaatgtcc tctgtgcggg gcatctacct      1560
     ggtaagactt ccaaacaggt ctcggacaag cgccgagact tgcacaggat acggtcttct      1620
     aacgtacatg gtacacccac cactcagagt cgtggagatc ctgttgaaca ggtcgaggag      1680
     tacgaggagt tggactggga aggaatgcat ccttttcccg accctgactc taagttttgc      1740
     tcgtaccttg atcagctgag agatcagaag ggactcactg aaccggtatg gcaggagatc      1800
     gaaatcgtgg cacaagaatg ggtagaaaac cttgcccatg ttcaatcgtc ttggaatcat      1860
     gagagaacaa ccaagcaggt gccagaaaac aatacacctg cacgaagacc atttaaaagg      1920
     cgtctccatc gtgtggaacg ttataagcgg tttcagagaa tgtacgacct ccagcgaaag      1980
     cgcctggctg aggaaatact agacggccgg gaagccgtca catgtaacct caaaaaggag      2040
     gagatcaaag accactatga tcaggtctac ggtgtgtcaa atgatagagt ttctctagat      2100
     gactgcccca ggccaccagg ggccaataac accgacctcc tgaaaccgtt tacgccaacc      2160
     gaagtgatgg actcacttca gggtatgaag aacggggcgc ctggccctga taagattacc      2220
     ctaccgttcc tccaaaaacg tcttaaaaat ggcatccatg tttccttggc aaatgtgttt      2280
     aacctttggc aattctcggg tcgcatcccc gaatgcatga agtcaaatag gtcagtcctc      2340
     atcccgaaag ggaagagcaa tctgcgggat gtcagaaact ggcggccaat cacaatctcc      2400
     tcgattgtgt tgcggctata caccaggatc ttggcacgcc gtctcgagcg ggcggtgcag      2460
     attaatcccc gacagcgagg cttcgtccct caggctgggt gtagggataa tatattcctg      2520
     cttcagtctg ctatgaggag ggctaagcga aagggaactc tggctctggg gcttcttgac      2580
     ttgtcgaagg catttgacac agttggtcac aaacatcttc tgaccagcct agaaaggttc      2640
     gctgtccacc cgcatttcgt ccgaattgtg gaggacatgt acagtggttg ttcgacgtcc      2700
     tttcgagtag gcagccagtc tactcgcccc atcgttctga tgagaggcgt caaacaaggg      2760
     gaccccatgt ctcctatatt gttcaacatc gctctggacc ctcttcttcg tcaactggaa      2820
     gaggaaagcc gaggctttat gtttagggag gggcaggccc ctgtctcatc tctagcatat      2880
     gccgatgata tggcactact ggctaaagat cacgccagtc ttcagtcgat gttgggcact      2940
     gtggataaat tttgttcagg gaacggactt ggccttaaca tcgccaaaag tgccggactt      3000
     ctgattaggg gagcgaataa gaccttcact gtcaatgact gcccttcctg gctagtaaat      3060
     ggtgaaacgc tcccgatgat cggtcccgaa caaacttacc gttatcttgg ggcaagcatc      3120
     tgtccgtgga ctgggataaa cagcgggcct gttaaaccca ccctggagaa atggatagcc      3180
     aatatcacag agtctcccct caagccacat cagagggtcg acatactctg taagtacgct      3240
     ttaccccggc tgttttacca acttgagctg ggcactctga atttcaaaga actgaaggaa      3300
     ctagacagca tggtcaaaca agctgtcaaa cgttggtgcc atctacctgc ctgtacggct      3360
     gacggcctgc tatactcccg tcatcgtgat gggggtttag ctgtagtaaa attagagtct      3420
     cttgtccctt gtctaaagat caagacaaat ctcagactag tgcattcgac cgaccccgtc      3480
     atatcatctt tggcggaatc cgatggttta gtgggtgcca tcgagggtat tgctcaaaag      3540
     gctgggcttc cgatccctac gcctgaccag cgatctggaa catatcattc taattggaga      3600
     gatatggaaa ggagaagctg ggaaaggttg gccctgcacg ggcaaggtgt ggagctcttc      3660
     aaaggctcaa gatctgccaa ccactggttg cctaggccag ttggtatgaa gccacaccac      3720
     tgggtgaagt gtctggcaat gagagctaat gtatacccta caaaaagagg cctcagtaga      3780
     gggaatctat ctaagaacaa agattccgcc aagtgtcggg gatgcacatc aatgagggag      3840
     accctatgtc atctaagtgg tcaatgcccg aaattgaagt cgatgagaat aaggcgccac      3900
     aataagatct gtgagcactt gatcgccgag gccagcttta aaggctggaa ggttctgcaa      3960
     gagcctacct tggttacaga caatggtgaa cgtcggcgac ctgatctgat cttccatcgt      4020
     gatgataaag cggtggttgt tgacgtgacg gttcgctacg aaatttcgaa agacacgttg      4080
     agagaagctt atgcttctaa agttcgaagg tatggatgtt tgaccgaaca aattaaagac      4140
     cttacagggg ctacctccgt tgtttttcat ggatttccaa tgggtgcccg cggtgcctgg      4200
     tttcctgaaa gctcggacgt gatggccgac ctgaacattc ggtcaaaata ttttgaagag      4260
     ttcttgtgta gacgcaccat cctatataca ctggacttat tatggaaatc gaataacgaa      4320
     caatatttag aaaggcttgc accataaatt ttgtctcttt ccccaatgat gtctactagc      4380
     acgctgccga agctagatag attgaggaat ctgcgtaatc tgtaatgatt acgcctcatg      4440
     ggcatctatc ggtagcgtcg accctgacgt taaattgggt aataagaaat atcga           4495
//
ID   R2_AM     repbase; DNA; INV; 4277 BP.
CC   R2_AM DNA
XX
AC   AF015815;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Anurida maritima retrotransposon R2, complete sequence.
XX
KW   R2_AM.
XX
OS   Anurida maritima
CC   Anurida maritima.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Collembola;
OC   Arthropleona; Poduroidea; Poduridae; Anurida.
XX
RN   [1]
RP   1-4277
RC   [1]  (bases 1 to 4277)
RA   Burke W.D., Malik H.S., Lathe W.C. III, Eickbush T.H.;
RT   "Are retrotransposons long-term hitchhikers?";
RL   Nature 392 (6672), 141-142 (1998)
RX   MEDLINE; 98175715.
XX
RN   [2]
RP   1-4277
RC   [2]  (bases 1 to 4277)
RA   Burke W.D., Malik H.S., Jones J.P., Eickbush T.H.;
RT   "The domain structure and retrotransposition mechanism of R2
RT   elements are conserved throughout arthropods";
RL   Mol. Biol. Evol. 16 (4), 502-511 (1999)
RX   MEDLINE; 99261661.
XX
RN   [3]
RP   1-4277
RC   [3]  (bases 1 to 4277)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
RN   [4]
RP   1-4277
RC   [4]  (bases 1 to 4277)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (09-SEP-1998) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
RL   REMARK    Sequence update by submitter
XX
DR   GENBANK; AF015815; 110.0.
CC   Positions       1    4277  Accession No AF015815     GenBank (rel. 110.0)
XX
SQ   Sequence 4277 BP; 1116 A; 919 C; 1195 G; 1047 T; 0 other;
     tcagttggca cttctatatt agttgtgtac ccaagagata gttactgtgt aggacatagg        60
     gggttctgct taccctctat gttgctactt acggccaatc atatggtcta gctgtacgtc       120
     gccttgtcgt ggtcccgccg ctcaagatcc ttcccatggg atcttgctaa agacgtacgt       180
     acggtgaacg gggttacatg ttgaacattg tgatcgttca acaatcccca aaaaggcgaa       240
     agctaaagcg cttgggtgac ttagtacgtt aaattggaag tttggcacta tctccattag       300
     gacctcacgg aacatttaat cgaaaagtca catggcggcc taaaagcccc accaatgcgc       360
     tacgccactg gtgatcctcc agaaatgggt aaggattagt acggctacag tgggaccccc       420
     cagatctccg gatctgactg cattagatgg agaatgatgc agtgaccgag tacgttgaat       480
     ctttgccttg gtctacggat aacgtacttt aggttggggt acagggtgaa gtaacctccc       540
     tccgtctctt gtgccaacaa gattcggagg tttatgcaac cacaatgaac aggaaaaata       600
     attacacccg tggtaaccgg ttcagttccg gaagtcccgg caattttgtg gttgtaaggg       660
     atcccgcaca ggatctcccg ttcaaatgtg cattttgcga acggacattt acaacgtcca       720
     atgggaaggg actccatgaa ctgagaagtc acccgaagga gtataacatg cgtgttccgg       780
     ttgcgaaaaa gcgggcgagg tggtcggagg aggagttaag tcagcttgct gaagctgaac       840
     atgacctcaa aagtaagaag caatatgctt ccgaactcga cctaagccgg gatctggagg       900
     gttgtatggt ggggagatct ctggaatcca tcaggggaca gaggaagctc ccacggtatg       960
     ttgagatctt taaccgactg tctaatagcc gagcatcaat cccagaaatt ggtgaaggtg      1020
     acgaggaagc taattcagtc ggttccgatg aggtgtttca tgcgtccggt catgggacag      1080
     ggattaccga ggcactagag gtgctggttt cgaaacggcc tggtgaggcg tttcgggagg      1140
     aagtcctgaa tggaatagta cgagcgaaac ttgagggtag cgaagtcttt gtacgacttg      1200
     agcaatattt gtcccggatg tttgtgggac aaagctcgtt ggcttctaca ccttgtagtt      1260
     cgggtgaggg gaaattgccc ttgacatgtt ctggctccaa caaaaaggaa cagaggtctg      1320
     atctgttctc ccggttccct gaaaagggtc cgagtgtatc agtttcagcg ccctctgtct      1380
     ccgacatggg acgtaaacgc cgcaaggcgt tatctcgtaa cgaggcaact caagtacgag      1440
     aggaatttgt tgagtttgcc agaaatgtcg atccaatacc ccgacgcaag tgtgctagag      1500
     ttaacgaagg cctacaaggt aaccagaggt tacctaaaga aaagccgatg accgctaggg      1560
     caaaaatgcg gcaccttcgg cttctaagat accgtaggct gcaagagttg tacaaaaaag      1620
     accgttccct cgcagcaaaa caagtgctgc aggacatgct tgattccaaa ccaggacgga      1680
     atcccgaagc ggttaagtac tgggctgaaa ccatgggtaa agaatccacc ggtattgatg      1740
     tgtccgtaat gaccggacgt ccgagatacc gagacaatgt atggagtcca atatacccgg      1800
     gggaggtttc agcagctgta aagctgatgg atagtagcgg ggctacaggt cccgatggtt      1860
     tcagtgtgag atctctgaag tgtacaccca gcagggttct ggcgaaggtc tttaaccttt      1920
     ttcttttgga ggaaaagctt ccggcattcc tgatgacctc aagaacggtc ttagtcccga      1980
     aagttaagga gcctaaggct cctacggact acagaccaat ctcagtttcg tccaccttgg      2040
     tccggctttt tcacaaaatc ctggcgagaa gactaacctt ggcgagcggg ttagacagca      2100
     ggcaacgcgg cttcgttcct gttgatggat gtgccgagaa cctcgtggtt ctcgaaagtg      2160
     ccatcaggag cgcgaagaac tataagcgtt ctctattcgt agcttctatg gatattaaga      2220
     atgcttttgg ttcggtagcg catgaagcca ttttcgaagc gttgtctaag tcgggtgcgc      2280
     ctgactcttt tgtgacatat gtgcgaaact gttacgacgg tttcgcgagt gttgtaaaac      2340
     ttggtcggga cactgcccaa actactgtga gacaaggcgt cttacagggt gaccccttgt      2400
     cacccattct gtttaatctg gttatagatc agataataag gtctcttcct gagacggtgg      2460
     gtgttcaact cgatgcgaac acgaaactta actctatggc atttgctgat gacctaatcc      2520
     tgctgagttc atcggaggcg ggtatgaggc ggatgttggg agtcctggct ggagtgagtt      2580
     caaaatttgg acttattttc catccaggta agtgcaagta cctagctatg atatgggcgg      2640
     ggaaacagaa aaagatgaag atcgcaacgg acttgagctt tgagataggt ggcggattta      2700
     tgacgccggt gggagtaact gagacatgga agtatttggg ggcttatttg ggacagattg      2760
     ggattcaacc agcaaggctc tctttgcaga cttttctgga gagaatcgct aagtccccgt      2820
     tgaagccgca acagaagttg tacctaattc gggtccattt acttcctaag ctcatatacc      2880
     cactggtaat ggcgcctatt agggcctcaa tgctcaataa gttggatcga atggttcgtg      2940
     ttgccctaac tggcaaggat ggtattctgc acttacccca gtcagtgcct tctgccttct      3000
     tctatgcgcc gataggtgag ggtggtcttg ggctaatgga gttgaggaca tctataccag      3060
     caatggtaaa ggcgagattc gagagaatga tgaactccac ttgtcatcat gtgagagctg      3120
     cagctaaggg cgctgcaaac tcgaacagaa tcgctttggc aaatcgattc cttcggaaga      3180
     ccgcagatgg tattcccgtg actagtgcaa agctggttaa ggagtaccag gcggcaaagt      3240
     tgcacggctc atttgatggg aaaccattga gtgaggctgg gcgggttaaa ggaatccact      3300
     catggacatg tgatggtagg atggtgatga caggacaggc tttctgtgag gcccttaaga      3360
     tccgcatcaa tgctcttcca tgtctctcta ggtataatcg gggaaccgag aagcctagag      3420
     aatgtagggc gggatgcaaa accacagagt ccctgaacca tgtcttacaa gtttgtccga      3480
     gaacacatga catgagagtt gcgcgacatg acaagctagt caatagacta ggtggatatt      3540
     tgagccagaa agggttcgaa atccacacgg aaccaagaat cattacgtct cttggattga      3600
     ggaagcctga tatcattgcg atcaaaggag agaagggagt ggtacttgat gcgcaaatcg      3660
     gaggagctgc aaatttaaat gcagctcatg acgctaaaat gtgttactac tcctcctctc      3720
     cggagatcaa agaatgggta acgggaaagg gagcgccgga cgtgtcctac ggcgcatgca      3780
     ttgtttcgcc acaaggcata atgtcggagg agtcctggaa aaccctgcgg gggttaggat      3840
     tctcaaaggg gatgctgaac tccttggtcg tgactgtcat ggagcaaagc acatatgttt      3900
     ggcatgtgtt caaccggagc actgcctcat atgggtggaa gcgcaggcga aagcgcaagt      3960
     gggattagct cgtttttagc aggaacggcg aagcctgaag gcaaatgttt gtttgagcgg      4020
     gaccctccct atgaagctct aaacaagctg atggccttgg aggcacgggg tctcgagcaa      4080
     tcacgtgttg atgtgaagtg gtgatcacta ccaccgctgg ggccaattag atgaacatgt      4140
     aagacccaac tggtaaggat tgaaagtagg agtcgacgta cagactctga atgtagggca      4200
     taacgtcaat ttgcctgatc gctggtgaat ctcgcttgcg agcggtgtga aatgtgccac      4260
     cttatcagtg gctatag                                                     4277
//
ID   R2_HC     repbase; DNA; INV; 1565 BP.
CC   R2_HC DNA
XX
AC   AF015816;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Hippodamia convergens retrotransposon R2 reverse transcriptase
DE   gene, partial cds.
XX
KW   R2_HC.
XX
OS   Hippodamia convergens
CC   Hippodamia convergens.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
OC   Cucujiformia; Coccinellidae; Coccinellinae; Hippodamia.
XX
RN   [1]
RP   1-1565
RC   [1]  (bases 1 to 1565)
RA   Burke W.D., Malik H.S., Eickbush T.H.;
RT   "R1 and R2 Provide an Estimate of the Age and Stability of
RT   Retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-1565
RC   [2]  (bases 1 to 1565)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
DR   GENBANK; AF015816; 110.0.
CC   Positions       1    1565  Accession No AF015816     GenBank (rel. 110.0)
XX
SQ   Sequence 1565 BP; 314 A; 400 C; 490 G; 361 T; 0 other;
     gcgtttgcgg acgacgtaat cctctgcggc accacttctt ggggactaca gagaaatctg        60
     gaaatcttcg aggaggagct ccgaagaagc ggactttcct taaatcctgg gaaaagtaag       120
     tgcgtttccc ttgttgcttc tggaagggaa aagaaggtta agctagtgat gaccccgaca       180
     ttcagagcgt cgggtagttg gcttagccag gtcgatggga ccaccttctg gaagtacttg       240
     ggattacagt ttaggggttg tgggatggcc ggttgtggtt cggacgatgt agctgagtgc       300
     ttggagcggc tcactcgtgc gccgttgaag cctcagcagc ggatgcactt gctgcgggtc       360
     ttccttttgc ccagatttta tcacgtctgg acatttggaa gactcaatgc gggcatcctg       420
     cgtcgtctgg acattcgtgt tcggaatgcc atccggacat cggtgcgcct accccacgac       480
     gtaccggtgg gatacttcca cgcgccgact aacgccgggg gactcggtat tccgcaattg       540
     tcgcgcttca ttccgctgtt gcgtcttaag aggtttgagc gtttggctca ctcctccgtc       600
     gaaagcgttc gggaatgcgc gaggaccgaa cctgccgtgg cgaaggtccg gtggtgtcgg       660
     gagcggttag cggacgtcgt agaccgggtc gcggatggaa cgcagagtct tcgcgaattt       720
     tggacgcgtg agctttatcg gtcgatggat gggagggcgc ttagggagtc tgtgagagag       780
     actccgagta cacagtggct ccgctgctgt acccgtgtca taccagccag agactggctc       840
     aattacatct ccgttcacat taatgcatta ccatcgcgtg ttcgaacatc acgtggcaga       900
     cgtgacggcg tggatgtgac ctgtaggggc ggatgcttga cagctgaaac ccctgctcac       960
     tgcatccagg tttgtcaccg aacccacggc gggcgggtgt tgcgacacga tgccatcgcg      1020
     aaggcgctgt cagtacatct tacgcagcgg ggttggagtg ttaggagaga agtctcctat      1080
     cagacggttg ttggagtccg acgacccgac attgtgcttc ttgcggggcg agaaatcgcc      1140
     gtcgtggacg tgcaagttgt cgcacctaac ccttctctgg acagcgcaca ccgcaaaaag      1200
     gtcgccaagt atcgtgacga ggctcagctc gccacgtgct tggtgcgagg agcttcggta      1260
     caaccaagga ggagagcgga agaagaaacg caagtgcgat ttgccagcgc aaccatctcg      1320
     tggcgaggtg tctggtcttc cgagtccgcg cggtccctgc gtgagctggg gctgacggac      1380
     cgggagctgg cacaatacag cacctacgac ctgcgtggct cctggatgaa ctgggtaagg      1440
     tttggtgcgt ctacgtctac tcggatggcg tggcgcccgt aaaatctcca aaggtaatcg      1500
     ccaaaccgtt tggtttctac atctgcgttc ccttcaggaa cggactcggt ttcatcattt      1560
     cctaa                                                                  1565
//
ID   R2_PS     repbase; DNA; INV; 3358 BP.
CC   R2_PS DNA
XX
AC   AF015818;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Porcellio scaber retrotransposon R2, complete sequence.
XX
KW   R2_PS.
XX
OS   Porcellio scaber
CC   Porcellio scaber.
OC   Eukaryota; Metazoa; Arthropoda; Crustacea; Malacostraca;
OC   Eumalacostraca; Peracarida; Isopoda; Oniscidea; Armadillidiidae;
OC   Porcellio.
XX
RN   [1]
RP   1-3358
RC   [1]  (bases 1 to 3358)
RA   Burke W.D., Malik H.S., Lathe W.C. III, Eickbush T.H.;
RT   "Are retrotransposons long-term hitchhikers?";
RL   Nature 392 (6672), 141-142 (1998)
RX   MEDLINE; 98175715.
XX
RN   [2]
RP   1-3358
RC   [2]  (bases 1 to 3358)
RA   Burke W.D., Malik H.S., Jones J.P., Eickbush T.H.;
RT   "The domain structure and retrotransposition mechanism of R2
RT   elements are conserved throughout arthropods";
RL   Mol. Biol. Evol. 16 (4), 502-511 (1999)
RX   MEDLINE; 99261661.
XX
RN   [3]
RP   1-3358
RC   [3]  (bases 1 to 3358)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
RN   [4]
RP   1-3358
RC   [4]  (bases 1 to 3358)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (09-SEP-1998) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
RL   REMARK    Sequence update by submitter
XX
DR   GENBANK; AF015818; 110.0.
CC   Positions       1    3358  Accession No AF015818     GenBank (rel. 110.0)
XX
SQ   Sequence 3358 BP; 730 A; 790 C; 1065 G; 773 T; 0 other;
     ggcaggagta actatgactc tcttgggcta tctgtaagga cattgcgtac ttgcggagca        60
     ctcaagtgat taatagatta ctgatagaag cgttcccaac agtcccgctg gatactgtct       120
     atttttgtgg aactcaagta ggctagggtc agccctagtt gtacgggttc accaggggta       180
     ggccgtgcta acttctatcc ccgttagtga ccgagagctt cgaaaaagca acgctagatc       240
     accagcagcc cccgggggga attaaccgat cgggggtctc ttggtcacgt atcggaatgg       300
     cggagcgaat ggttagttgt gtcgtttgcc gaagggaatt tcgaacggcc agggggcttg       360
     gcgtccatat gcagagggcc caccgcgaag aatacgatca acgcgtgggc caggaggctg       420
     tggacgtcaa ggtccgctgg tcgaatgagg aaaccatcct cctcgcttcg aaggagcttg       480
     agctgcaggg ccagggaatt caaaatctga atcaggaatt ggctcgtctc tttcccagat       540
     cgctctaagc gattaaaggt aaaagaaagc aggtggcata tcaacgaatc cgtgatgaag       600
     tggctcgggg ggtcggggtc cctgctgacc ctgaacctcc tgagccggtg gaggttgaga       660
     tcccatgggt ggtctcgccg cctagggggg gattgtaagg gcgccgggaa tttccggtga       720
     ggatctcgcc cggctgctgc atcaatgcgg tttttcggcg ggcgagatcg ggccaaatct       780
     cccccggggc cgcgctcgca acgctcctac tccggagtgg gagctgaaca acagagtcaa       840
     gcgtaagcgt cagaagtttg ctcttacgca gaccctctac tacgaggata agtccaaagc       900
     gcttgacttc ataatggatg ggagaaatcc attcgaggcg ggcgagccct ctcgtgcggt       960
     gagggatgag tggagggagt attttgagac acgtgtggac ctgggcaggg tggcggatgg      1020
     tgcttgcttg agggtcggtc agcccgtgga cagatttcct gccgtgggtg acgacataac      1080
     actggcggag ctcgagaatg cgttgaggag caccccctct aagaccgcaa agggggtgga      1140
     cggtgtgggg ttggaggagt taaagcgagt gcctagaaga acccttttta acatcctcaa      1200
     cggactttgg acccacgtcc cggagtcgtt gtacaaaggg agaatcactc taatccctaa      1260
     gaagtcgcta ccggagttgg ctggagattt tagacctatt tgcgtgctcc ctgtggtggt      1320
     tagactgcta cataggatac tcgcaaaacg gcttgcgatt gtccaacata ccgaattcca      1380
     agccggtttc cagtctggca ggtctacttc ggagaacatc ttccttctga ggaccatttt      1440
     ggagtcgttg cctgcgggga aggagtctat gtatatagca ctccttgact tccgtaaggc      1500
     ctttgactcg gtcaaccaca cggtgttgtg tgggctgttg agggatttgg gcttgcccga      1560
     gcgcctgacc gggtacgtag agtccatcta ccggtcagtg catctgactc tcggtgacga      1620
     ctggttcgtt caggggcgtg gagtgttaca gggtgatccc atatccccgt tcctgttcaa      1680
     cctgatgatc gattacatcc tgagtggcac tcaggcggga gtaggtgtcg gggtcggaga      1740
     gcgcttagtt tccagcctgg catacgctga tgaccttgcc ctgcttgcgt cctctaggag      1800
     gggtttgaat gcgaatctgg agtcggtcct cgcccgggca cgctcggtca atctggcact      1860
     tggaattaac aagtgcgcga cgatcggcaa gaggtggctg ggccgagaga aaaagatgat      1920
     tcttgaccga gaacccttcc tgttggaagg ggttgcgatt ccggtatatc gttggaacaa      1980
     catatacaag tacttgggga tagaaacctc tccgggggcc gcggcccgct ggagtgtcac      2040
     tggattgaga aaccgtctaa gtaagctcga gtccgcgtgt ttaaagcctc agcagagaat      2100
     gcacctgctc aggtgttacc ttcttcctgg gctgtattac ggtttgatac accagggaat      2160
     ctcggttggc ctgcttcgaa gtgctgataa gcaggtcaga gccgcagccc ggaagatcct      2220
     tcaccttccg ggggacgtcc ccgtcccgtt gttcaatgaa aagtcggcgc tcggcgggct      2280
     ggggctcgtc gagctagaag tcaaggtgcc ggagctgtta gacaagatca gaactggact      2340
     gttggggcgg ggcggcctct ggagggtggt ggctgatcgg attaagatcc cgatctcgaa      2400
     tagggaaaga cggctccttg tcacggagtt ttgtgacggc cgaggctttt gccaagcaag      2460
     gaaaagaccc ggatgctgcg cgtgggtgtc gaacggcaaa cttctcatga agggagccga      2520
     ttacgtagag gcagtcaaga tcaggttggg cgttgtgtcg accaaggaga gggcagcaag      2580
     gggaaggaac gtgccccttc accaagtaac atgtgaccta ggctgcccga gggtggagtc      2640
     gctggggcat atcctgcagg agtgcccttc gatttccaac ctccgaatct cccggcacaa      2700
     cgcattggcc tcaaggatac gccgggctct cgcgggtaag gggtggagca cggtcgaaga      2760
     accgactatt ccaacgatac caggaaaccg acgccccgac ctggtggcct ggcgtggaga      2820
     aagggctatg gtctttgata cggccattgc gcgagctcac gcggcggttt tgaacgaggt      2880
     gttcgatagg aaggttgtta agtataatac acctgaaata catcagtggg ttattggacg      2940
     ttcgcgggca agagtggttg aggtctcggc gctggtcctc aactggcgtg gggatatggt      3000
     ggagaagtcc tatgttatgc tgagggctct cgggttaacc tcggctatta aattcatgga      3060
     ggtggcttgt atggaggggt ctgttagatc cctaaggttt ttcaaacaag cctccggcag      3120
     atggggttga ggcgtgaatg tggttcgtcg ttcagttgaa cgggggtgga agtctgtcca      3180
     aagactctcg cccggcatga acccgcccat gtcgttatcg tgtacataac agattaacgt      3240
     tccctccggt gggacggttt actgttccgc cgggggtgga gattgctttt gtacatctcc      3300
     cctctattaa gtttctgcgg tggtggaggc ggggaattat ttaaaaaaaa aaaaaaaa        3358
//
ID   R2_FA     repbase; DNA; INV; 3513 BP.
CC   R2_FA DNA
XX
AC   AF015819;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Forficula auricularia retrotransposon R2, complete sequence.
XX
KW   R2_FA.
XX
OS   Forficula auricularia
CC   European earwig.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Orthopteroidea; Dermaptera; Forficulidae;
OC   Forficula.
XX
RN   [1]
RP   1-3513
RC   [1]  (bases 1 to 3513)
RA   Burke W.D., Malik H.S., Lathe W.C. III, Eickbush T.H.;
RT   "Are retrotransposons long-term hitchhikers?";
RL   Nature 392 (6672), 141-142 (1998)
RX   MEDLINE; 98175715.
XX
RN   [2]
RP   1-3513
RC   [2]  (bases 1 to 3513)
RA   Burke W.D., Malik H.S., Jones J.P., Eickbush T.H.;
RT   "The domain structure and retrotransposition mechanism of R2
RT   elements are conserved throughout arthropods";
RL   Mol. Biol. Evol. 16 (4), 502-511 (1999)
RX   MEDLINE; 99261661.
XX
RN   [3]
RP   1-3513
RC   [3]  (bases 1 to 3513)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
RN   [4]
RP   1-3513
RC   [4]  (bases 1 to 3513)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (09-SEP-1998) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
RL   REMARK    Sequence update by submitter
XX
DR   GENBANK; AF015819; 110.0.
CC   Positions       1    3513  Accession No AF015819     GenBank (rel. 110.0)
XX
SQ   Sequence 3513 BP; 1084 A; 813 C; 761 G; 855 T; 0 other;
     tagtccaaaa gccttgtcat cttaggatga cgcgcaggtt tttgagatgt atatttttat        60
     agtagtagta aaatacgact tgttaaattc ttaagataaa gagtcatagt agcaagtgaa       120
     gaccttttcg tggttcctgt cataagtacc ctacggggaa accaacttca cccctgcgaa       180
     catggagctt agaggttacc agcctcctcg ctcgtcaatt agcttggtcc cagatcaata       240
     aaccagcctc ggataaggac ggattcaccg aatatcgtta gaccctctgg ttcaacgacg       300
     accatgcaaa gatgcaccac gtcagacttg actttctccc aatgtagatt tcctcattgt       360
     aaattcagaa gaccatctct tactggtgtc agggttcatg aacaaagatc tcacaaggcc       420
     ttttttgaca gactgcaggc tgaagtaatt cgaaatcaga cgtcaaaaaa gaaaccgaga       480
     tggaccgaag aagagaagaa cctgttagca cttgcgcagg cgaatctcat aatcgaagaa       540
     gaaactaata ttatcgatga cttggtctcc aagttcacat atagaaccaa agatgccctt       600
     aagagccaaa tcaggaaacc cgaacacaaa acccgagtca gtgagttcac tttggcaatt       660
     caagcccata tagacaatat tatgctcccc gctcccgtcc ccatagctac tgatccgttg       720
     caagtctctt gcaacttcaa ggacagagca aaagactaca tcgacacatt agagcccata       780
     acttcaacta aattctattt agacgagtta gaggctctgt gtgacaatat ttgtatatgg       840
     ccgactaggc tacttatcac aacagtggag tcttacatac gaaaattgtt taaaacaaca       900
     agtacgttga agccagcaca gaagttacat aatccttcaa acaggaatct tccaaagcgc       960
     cagctaagac gtatggagta tggtaagacg cagaagctgt ggaaaaagaa cccgtgtcgt      1020
     gccataaaaa caattattga cgataaggac tgtaagtcgc cacccgaaag ggaggcgatg      1080
     acgcaatact ggaagacaac gttttccagt aaaaagcgga catgtcccca gtatgagcct      1140
     cgcgaaagta ccaaaaccca gttgtgggaa ccggttacaa tcgaggagct tcattgctgc      1200
     caccttgaaa tgacaaccag cccagggcct gacgggatca ctgttagaca gctttacctc      1260
     gttccggagc aattgcttgt cagaatatta aatctcctaa tggcctgtgg caaaatgcct      1320
     gatagcttct tggaatccaa aaccactctg attccaaaga agcccaactc tactgaaccc      1380
     ggcgattttc gcccaatcac agttcagtca gtgttggtca ggcaactgaa taaaatccta      1440
     gccgccagag tagcgcaaca catcccacta gacgaacgtc aacggggatt tagaccagta      1500
     gacggagtcg ctcacaacat cttcgaatta gacatgatac ttaggtgtca tcgatctgaa      1560
     ttccgcgatc tccgacttgc ctccctcgac atagcgaagg cattcgactc cattacacat      1620
     aacaccattg aggataccat ggaagtaagg ggtttcccta aacccatgat taactacata      1680
     atggcttgtt atcgccgcag taaaacgaga ttcaccttta atggatggat ctcagatact      1740
     gtgaaaccca cttgtggggt taaacagggt gaccccttgt caccaatact gtttaatcta      1800
     gtaatggaca gaatgatccg gaagctaccg aaggaggtag gagtcaatgt aggcagtaag      1860
     cactataatg gtcttacatt tgccgacgac ctactgctct tcgcgactac tcctgaaggc      1920
     ttgcaatcct caattgacat tgtccacctc ttcctcctgg aatgtggact attgatcaac      1980
     aagcaaaaat cctttgtcct tacggtcaaa gcatacccaa agctcaagaa gacggcggtc      2040
     atcgtcacag agaagtatat gttagaccgt catattcttc ccgctattga tagagagaag      2100
     ctattccact atcttggcgt tccattcaca gctgaaggaa gatgtagaga cgataccata      2160
     gcccacctca aacgaaaaat cgatgtgctt acaaaagcac cgcttaagcc ccagcagaga      2220
     ctattcgcac ttagagttgt catcctccct agctgttatc acatcctaac gctaggagga      2280
     tcgaacctaa gtctgctaaa gaaaatcgat ttgatggtaa gagctgcggg taggaaatgg      2340
     tgctgcctgc caaaggacac gcccaacgca tattttcatg cgtcaagccg cgatggagga      2400
     ctaggtctgc cctccatgag atggcttatt cctctgcaca ggtatctaag acttttacga      2460
     tatgagggaa gaaacccaga agacactaat gtgtacttga cgactgaaat caatagagca      2520
     aaaattagac tctccgacaa tggctctaac attgattgtc aagccaagct ttggcaattc      2580
     tgggcggacc gattgtataa gtccgtggac ggctctgccc taatcgaatc cagtaaagta      2640
     ccacaacaac atcggtgggc tacaggtggt agcagatttt tgacgggacg ggattttatc      2700
     aactcaatta aattgagaat aaataccctg ccgacactat ctaggacgct acggggtcgt      2760
     gaaggcaacc gaatgtgcag aggtgggtgc tacaatgtag agacgttaca tcatgtccta      2820
     caggtatgtc accgaacgaa cggaacacga gttaaacgac ataacgccat caggcagtac      2880
     attgcgcggg gtgctgctgt caaatttgac acagtcgaga gagagccccg tataaagtct      2940
     gcgtctggtg cagttaacat cccggaccta gtggcttgta acagcgatga agtggttgtg      3000
     atagataccc aaatcgtctg ggaccaggcc aacctggatg aagctcacca agccaaagcg      3060
     gagaagtatg ctcacttaag tgacatactt aagcataaat atagtagaga tagggtaaag      3120
     tttacctctg taacgctctc cttcagaggc ttatggagta aacaatcgct gaaggaactg      3180
     actgacctgg gaattgtcaa ttccaaagac attcaaatca tttctaccag agctataata      3240
     ggaggtattg catcatttag gatgtttaat tcaacaacct cagtaaattc agtaaattcc      3300
     tttctagaaa tcgcattggg ataggatgat agcgcacctg gtcatcgtct ctctcagctg      3360
     ctcacttgct gttctaagtg ataataccgt tgttttttta gtgggtattc ttttacgctt      3420
     tcgtaggagc gagtcccaca ctcttggagc aatccggggt agtgcctaaa cgcatttctt      3480
     caacgtaaaa aaaaaaaaaa aaaaaaaaaa aaa                                   3513
//
ID   R1A_SS    repbase; DNA; INV; 1535 BP.
CC   R1A_SS DNA
XX
AC   AF015820;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Scolopendra sp. retrotransposon R1 reverse transcriptase gene,
DE   partial sequence.
XX
KW   R1A_SS.
XX
OS   Scolopendra sp.
CC   Scolopendra sp.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Myriapoda; Chilopoda;
OC   Scolopendrida; Scolopendridae; Scolopendra.
XX
RN   [1]
RP   1-1535
RC   [1]  (bases 1 to 1535)
RA   Burke W.D., Malik H.S., Eickbush T.H.;
RT   "R1 and R2 Provide an Estimate of the Age and Stability of
RT   Retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-1535
RC   [2]  (bases 1 to 1535)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
DR   GENBANK; AF015820; 110.0.
CC   Positions       1    1535  Accession No AF015820     GenBank (rel. 110.0)
XX
SQ   Sequence 1535 BP; 277 A; 364 C; 454 G; 440 T; 0 other;
     gccatggctg atgattcact cgttctggtg gctgctccct ccgttaaacg tattgaggaa        60
     ttgtggatcg tctgtcggga agacctggaa aactgggcca ctgagaacaa cttggaattc       120
     aacagggaga agactggact tcttttccac tcttggagac ctgttcttcg accgccagtc       180
     ctacggtttg gtggtgttga tcttgttccc agtaccggtg tcaggtactt aggcatcatt       240
     gtggatgtga aatttgactg gctggctcat gttcgctttt tagccggtaa agtcaagcgg       300
     atggccaatc ggatttcagt ggttgtgggt gcgaattggg ggattaagcc tctcgttttg       360
     cggactttgt atctgcgtgc cattttgcct atgcttctgt atggtgcacg gatttggggc       420
     ctgagagcgg gaagagtttt catgcagaag agggtaaatg ccttgccccg cttcttgctg       480
     ttgaatatcg ctaggactta ccgcacggtg tcgacggagg cgttgtatgt cctatgtggg       540
     ttacctcttc tggctattgt cgctgaagag accgctctgc actatgctag actctctggt       600
     ccggactatt gtcgtgatac tcctgttgct gaatggactc accctgccga ccgtgttgcc       660
     ctaccggtgg gaacgtatga gaccatggat gccaccaggc ttcagctctt cactgacgct       720
     cgcgacgtga gggcagaacc gcatcgggct tcgtcattta tgacaacggg gttcaaattg       780
     atcactctag tgttcgcctg ggtgacggta attctgtctt tcagtctgag gttctagcta       840
     tttggtttgc cgttatggcc attcggcggt tggcggtgga tgaggcttct cttttttctg       900
     actctttgtc ggcccttaca gccatcagtg gcagcaaccc ggtggatgct ctggtcaggc       960
     ggacgagggt ggccgttgac gaactgtgca ccacctgttc tcttcacctg ggttgggtca      1020
     aggcccatgt cgggatcgcc gggaatgagg aggctgaccg tttcgctaaa ctcgctctgg      1080
     acaaggatat tgagcatcgg aagttgctac caaggtcgca ctctagcctg attaagcaga      1140
     ggactatctt ctttcagtgg caggccctgt gggaggggca caaggacggg cggccggtct      1200
     tcgccctctt cccgaaggtc agctcgaggg gtgccttatt tggccggaaa atgatgcagg      1260
     tcataaccga gcatggtaat tttgccaagt atctacaccg atttgctttg atggagtcac      1320
     ctgcttgtcg ctgtgggggt ggtgaggagt ccgtggccca tatcctgcgt gagtgcgatc      1380
     tgccttttcg tgctgctgca agatctcgtt tccttcgcga gatggttccg cgtgggctca      1440
     cgtgggcgga tatggatggt tcctggtgcc gtgacgaatt tgctactcac tttgagcgtt      1500
     ttgttaatga cgtcatcagt gatcctttca cctaa                                 1535
//
ID   R1B_SS    repbase; DNA; INV; 1484 BP.
CC   R1B_SS DNA
XX
AC   AF015821;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Scolopendra sp. retrotransposon R1 reverse transcriptase gene,
DE   partial sequence.
XX
KW   R1B_SS.
XX
OS   Scolopendra sp.
CC   Scolopendra sp.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Myriapoda; Chilopoda;
OC   Scolopendrida; Scolopendridae; Scolopendra.
XX
RN   [1]
RP   1-1484
RC   [1]  (bases 1 to 1484)
RA   Burke W.D., Malik H.S., Eickbush T.H.;
RT   "R1 and R2 Provide an Estimate of the Age and Stability of
RT   Retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-1484
RC   [2]  (bases 1 to 1484)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
DR   GENBANK; AF015821; 110.0.
CC   Positions       1    1484  Accession No AF015821     GenBank (rel. 110.0)
XX
SQ   Sequence 1484 BP; 383 A; 330 C; 455 G; 316 T; 0 other;
     gcgtttgccg atgacacggc tattatcatc gaggagactt ccattaagaa gatcgaagac        60
     agctggcaag aggcggaaag gagagtgcag cggtgggcaa caaggaataa aatcgttttt       120
     aatgaaaaca agacggaggc cattttcttc ccagccaaac atgccaaaaa ggtaccaatt       180
     atcagatttg gtctgaacct ggtaggtata aaagagtcac ttcgttactt aggtgtgtat       240
     ctcgataaga gtcttttgtg gagggtacac ttacaggtcg tacagggcaa agttgggcga       300
     atcgcactga aaatgcgtca ggttgtgggc acacattggg gcattgacca aatgaccatg       360
     cgagtgctgt ataaacgagc tctgcttcct ctggtcatct acggctgtga gatatgggga       420
     gagtgcgcac gcaagaagtg gggagtgaaa cgacttgaac aaatccagcg acccctcctt       480
     ttggggggtg gtaaaagcgt gtcgaactac ctccacacac gccttacaag ttttggcggg       540
     gctcccccca ctcagtgttg agataattgc gcgaaggcaa cattatgccc gcttgggggc       600
     tgacgactat gaaagccata tcccggtgtg cgactgggtg catccagcac acatagagga       660
     agaagcagtt gggacatacc cacttgaaat tgaggcgagg acagccctct ttacagatgg       720
     gtcaaagact gaggacggtg taggttatgc ggtggtggtg atggaagggg gagaggaggt       780
     gcgaactcat acgggttgcc tgccgagcta ctgctctatc gcccaagcag agatgagggc       840
     tatttattgg ggctcttcag ttttggagtg attgtggaaa tgggccggcc tgtctgtgct       900
     ctgattcaag atcgtctctt caacatatcg ctaacggtcg ccagggagat gcaacagtca       960
     tggcagcgga cgcccttcaa cgctgccgag agcaacagag ggcggtctcc ctctcctgga      1020
     ttaaggcaca cagcgggcag gccggcaacg aacgggcgga cgagttggca agacaggctg      1080
     cgaagaacga cctgtcgaca ggtgaagaac atgttttgag accgaaggcc tactcgaggg      1140
     atatcttgag aaatgaagtg cgtgcgttat ggcaacaaca gtgggcaatt tcgataaaag      1200
     gacgttggac ttttgaggtt ctcccacagg tgtcgcagtc gccgccggtg cttacaagca      1260
     agatggtgca gctcctaacc aatcatggga actttgcgca gtatcgaagc aggttccggc      1320
     ttacagagga agatggcgtc tgtatctgca aacaagggca ggagacagcg cacgacgtcc      1380
     tggtggaatg tggcctgcca cacagagccc gggcccgttc tcggatcgag caaatggctg      1440
     tggtacaggg tgtccagacg tggcagccag agtgtatgga atag                       1484
//
ID   SR2A      repbase; DNA; INV; 552 BP.
CC   SR2A DNA
XX
AC   AF025680;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Schistosoma mansoni SR2 subfamily A non-LTR retrotransposon.
XX
KW   SR2A.
XX
OS   Schistosoma mansoni
CC   Schistosoma mansoni.
OC   Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea;
OC   Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-552
RC   [1]  (bases 1 to 552)
RA   Drew A.C., Minchella D.J., Brindley P.J.;
RT   "A second family of non-LTR retrotransposons from Schistosoma
RT   mansoni: Subfamilies and nested insertions";
RL   Unpublished
XX
RN   [2]
RP   1-552
RC   [2]  (bases 1 to 552)
RA   Drew A.C.;
RT   "Direct Submission";
RL   Submitted (19-SEP-1997) Molecular Parasitology Unit, Queensland
RL   Institute of Medical Research, Post Office, Royal Brisbane
RL   Hospital, Brisbane, Queensland 4029, Australia
XX
DR   GENBANK; AF025680; 110.0.
CC   Positions       1     552  Accession No AF025680     GenBank (rel. 110.0)
XX
SQ   Sequence 552 BP; 131 A; 129 C; 102 G; 190 T; 0 other;
     ttctcgctca cactagaagc aagacaattt acactattat tattattatt accattatta        60
     ttattattat tactattatt attattatta ctattattta ctacgtcgct ttttcactcc       120
     ctttattctc aaattgtgta tccttccttt ccaacttatg caggagctcg cccatggtgg       180
     aaaatctgtc ctatctaaac gatctccagt cactgtctgg ttgaaagtga atgcttccac       240
     cgattatgaa tactgaagca gtctttctga aaccgcgtac accgttcaag ctggcttcct       300
     tcaacgttcg cacactaatg cattatcaga caacagatgg ggctggctat gtctttggaa       360
     ggtcttaatg ttgatgtttg ttgtctatcc gagacctgta ttcaagactc tagtgaagta       420
     ctacaaattc gctctccatc tgtctcctcg aaaagcttgt ttcacgtgcg cttatccggg       480
     gaccctgtgg catcttcgtc tggtcttgct ggcgttggtg tcgcactaag cgctagggct       540
     gaggcagcac ta                                                           552
//
ID   SR2B      repbase; DNA; INV; 2399 BP.
CC   SR2B DNA
XX
AC   AF025681;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Schistosoma mansoni SR2 subfamily A non-LTR retrotransposon.
XX
KW   SR2B.
XX
OS   Schistosoma mansoni
CC   Schistosoma mansoni.
OC   Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea;
OC   Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-2399
RC   [1]  (bases 1 to 2399)
RA   Drew A.C.;
RT   "Direct Submission";
RL   Submitted (19-SEP-1997) Molecular Parasitology Unit, Queensland
RL   Institute of Medical Research, Post Office, Royal Brisbane
RL   Hospital, Brisbane, Queensland 4029, Australia
XX
DR   GENBANK; AF025681; 110.0.
CC   Positions       1    2399  Accession No AF025681     GenBank (rel. 110.0)
XX
SQ   Sequence 2399 BP; 609 A; 530 C; 582 G; 678 T; 0 other;
     gtaaactggc tgcaacatct gttgcaagta agtatcgagc ggagctagcc tctaggctag        60
     ctaccacccc accgaaaagt atagatgagc attggttgca tcttcacgac gccatgaaaa       120
     tggcgagtaa agtcgcttgt ggcttcgcga aacgtcccgc ttacaagcac tgggtttctt       180
     ctggctcctt acaactgatc gaagcccgtc ggtctactcc gggtgaccgt gagtttgacc       240
     acaaacgaag gctgttacgt aatgaaatcg ggcaaagctt gcgtaaggac cgggaagcct       300
     ggtggtcgga gcgtgctaat gagatggaag cagcagctgc atctggtaac tgccggaagc       360
     tcttccaact catccgagcc actggcagca agaagtctgg tgtgagtgaa acaatctgtg       420
     aggatgacgg gatgccaatc actaacatct gtcgacgtct tggacgatgg gcggaattct       480
     tcgaagggca gttcaactgg catgctgctc cggcaacatc aaccagcttg tccttccccc       540
     catggccggt gacgactgat ccaccaaacg aggcggaagt ccgcaaggaa ctccaactct       600
     tgaaacgtta caaatcaccg ggcccagatg acttacaccc agcacttttt aaagatggtg       660
     gtgactttct ggctaaggaa ctgactgtgt tgtttggaaa ggtttgggag caagaaagtg       720
     ttccaacatc atggaatgag tcgatagtcg tccctatctt taaaaagggt tcacgttgtt       780
     cctgtaacaa ctatcggggg ataagtctac tttcgattgc gtccaaacta ttggcttcta       840
     tcattcttcg taggttgttt aaaacccgag aacgattgac tcgcgaggag caggctggtt       900
     ttcgttctgg tcgaggatgc attgatcaca tcttcaccct ctgccaaatg ttagaacacc       960
     gtcatactta tcgcaggcca acaatcgtag tgtttcttga tatcagggct gccttcgatt      1020
     cgttggacag gactgttctc tgggattgtc tattgaagaa gggtgtgcct gagaagttca      1080
     ttaacatctt aaaggccctg tatacgaaca cctcaggcag agtgagggca tacaaccacc      1140
     tttctccctt gttccattcg agcagtgggg ttaggcaggg ttgcccgatc tcaccattcc      1200
     tcttcaactt tgccatcgac gacatcctgg aaacagctct gatggatgta agtaatggca      1260
     gtgtggatat gttgcctgga gaacgacttc tcgaccttga gtatgcggat gatattgtct      1320
     tactgtgcga taatgcccaa ggcatgcaat ccgcacttaa tcagttggca atcagtgtcc      1380
     gcaggtacgg catgtgcttt gcaccctcca agtgaaaagt actcctacaa gactggcagg      1440
     attctcatcc tgtactcacc ctggatggtg agcagattga agtagttgag aagttcgtgt      1500
     atctaggcag ctatataagt gctggtggtg gcgtgagtga tgagattgat gcacgtataa      1560
     tgaaagccag agcggcttat gccaatctgg gccatctctg gcgccttcgt gatgttagtc      1620
     tggctgtaaa aggtcggatc tacaacgcgt cggtaagagc agttttgctt tatgcttacg      1680
     agacctggcc tcttcaagtt gagcatgtta gatgactctc tgtgtctcat catcattgtc      1740
     tttgaagcat tgctgacatt cagtggtcgg gtccagtggc gacaccatgt tggcaatgca      1800
     gagattcggc aacgtgtgtt cgggcacagc aacgataact caattggtgt cactaacttg      1860
     aaacactgac ttcagtggat tggacatgtc ctacaaatgt cgtcccagag aattccacat      1920
     tagacattat ttgccaacgc tagggccggt tgaaaagaac cgagaggtgg tcagtgtatg      1980
     acatggtgtc gtgttatgaa agaaagttat acaggactgg tttccgttgg tcattcacaa      2040
     ctccctgatt ggggtcctag agacggtaca acacagtggc ttgaaatatt atcagacata      2100
     gttcagaata gaagccagtg gcgatcctgc tgcaaccgtc ttttactttc tacataaaga      2160
     gtggttctaa ctttcttaac tgaaagtgtc ttctggttgt acattttagt ccgcgttatc      2220
     ttttcatcct ttctcttcct actttcatta ttttgtgtgg cgcatatgta tctggtgccc      2280
     ttttgtacca atatatatgt gtttaaataa ataaataaat aataaaatca tatataatat      2340
     gatttaatca ttctcatatt tttcaataca ctattttata tatgtattat ttatttatc       2399
//
ID   SKIPPER   repbase; DNA; INV; 6998 BP.
CC   SKIPPER DNA
XX
AC   AF049230;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Dictyostelium discoideum LTR-retrotransposon Skipper,
DE   Gag (gag) gene, complete cds; and Pro (pro) and Pol (pol) genes,
DE   partial cds.
XX
KW   SKIPPER.
XX
OS   Dictyostelium discoideum
CC   Dictyostelium discoideum.
OC   Eukaryota; Dictyosteliida; Dictyostelium.
XX
RN   [1]
RP   1-6998
RC   [1]  (bases 1 to 6998)
RA   Leng P., Klatte D.H., Schumann G., Boeke J.D., Steck T.L.;
RT   "Skipper, an LTR retrotransposon of Dictyostelium";
RL   Nucleic Acids Res. 26 (8), 2008-2015 (1998)
RX   MEDLINE; 98186844.
XX
RN   [2]
RP   1-6998
RC   [2]  (bases 1 to 6998)
RA   Schumann G.;
RT   "Direct Submission";
RL   Submitted (17-FEB-1998) Molecular Biology and Genetics, Johns
RL   Hopkins University, 725 N. Wolfe Street, Baltimore, MD 21205, USA
XX
DR   GENBANK; AF049230; 110.0.
CC   Positions       1    6998  Accession No AF049230     GenBank (rel. 110.0)
XX
SQ   Sequence 6998 BP; 2750 A; 1140 C; 1033 G; 2075 T; 0 other;
     tgttagagac tcaaaactaa attaatttaa agttagtatg agctcaacaa cgtaacaaat        60
     tcgcgcatct ccatgtaaaa atatttcatt taatttttat ttttattttt taatttttta       120
     ttttttcagt caaaaaataa aaaattaaat taaaaaaaat aaaattaaat taaaatttaa       180
     aaaaataata aaaattctga tttttcggtt tagttttcat aacgccctta cttttaatta       240
     tctcttttat gtatgtttac ttttatgata ttagtctttc actctttcta tccttcatat       300
     taaaaaacat tactttaaag attggactgt ttgatttaag attgaacaaa tgtgacaatg       360
     gattgaagat tagtgtgagt gacttttaca cttttttttt ctaattttaa cataaaacaa       420
     atacattaaa acaaataatt agatacaatc cttatatttc gtatacaatg acacctcatg       480
     atgaagaagt cgactcttca gattagagga ataacagtag tatttaaaac aaaataaaaa       540
     tgcattacaa tggcccttct gtttgcaaga ttaacgctgt actgcttagg cggtacaacg       600
     acacttccta ctcacattgt aaacatgcat cttttataaa gtaatataaa acaagattgt       660
     atcaattaat ttaataataa tgctcaaata caaagacacc acaatataaa ttattagtgg       720
     aataacagtt aaacaaagac accacaatat aaattattag tggaataaca gttaaacaaa       780
     gacaccacaa tataaattat tagtggaata acagttaaat aaagacacca caatataaat       840
     tattagtgga ataacagtta tattgatgcc attgttataa ttaaaataat ttaagataat       900
     atttattatc aattaaataa tataaagaca ccacaaaaaa aatatattag tggaataaca       960
     gttaacatat attaatactt atatttaatt attcaattaa aaattaaatt aaattaaatt      1020
     aaataaatta aattaaatta tataattaaa ttatataatt taaattataa aattaaatta      1080
     taaaattaaa ttatatttaa taaattttat atataattgt tggtgaaagt catgtcatca      1140
     actactactc cttcaaagaa agccatccgt aaagccaaag tgtcttccac cgccaaacgt      1200
     gccactgaag tgacaaccgc ctccgatgat gctattactg ttcaagtaaa atcaaaaaag      1260
     actcttcgtc ccactgaagt cgatgatgaa atttattcaa ctgaaagcac tgatgtatcc      1320
     gacgtcgaag tcagagagaa agtgccaaag aaatcaaaga ccaattccat tgaagctaaa      1380
     accattgacg ctttaaaaaa tgctgccact gctgtcatct tcatgaatct ctttaccatc      1440
     cactgctccc agaatggtgt tgaaccaacc ttgaagacca ttatggacaa tggtgctgca      1500
     tcaaatgaat tatttcaatt gcttcaacct acccacaatg aatcagttaa gaacaacgat      1560
     aaaattgaag gtgaaacatt gaagaagcta atacaccgta actttagatc caagactttg      1620
     gttccattca aaactgacta cgaagctgcc aacactaaag tagtcgaagc tattaaccat      1680
     cgtaactgct actcagccca agatgttata aaaaacatcg aagccattat gagttaccac      1740
     aatgtaatta atccggtgta tctaatccat ggtactgctg aagttcaatt agagtatcta      1800
     agatcaattt tagataataa tatccttgct ttgttaaaga tggtcgtacc agactggtta      1860
     caaactgatg ttgcaatcaa actcaacact caaaccgata tcaccgagtg tcgtgaagcc      1920
     atcaccgagt tggttcttaa caatgctgat aagttctcga gaagaagacc ttccgattcc      1980
     gcatcgaata atgatgagaa gtttccatta aaaaagaatc atgctactcc aaatcataac      2040
     tctcataaca ggaattcctt tgatgcacaa gctgataaga ttagagctgc aatattacct      2100
     gaaataagaa aagactctaa ggtagacctc aaaaagataa gaagcagttt catcgtttac      2160
     cgtcagagca aaggctactg tctcaattgt ggtaaatcaa atcactccac atctacatgt      2220
     agaattgatc cggtcgatgc caaagccaat ccaggtccat cagccaaaaa gcaacaatga      2280
     ctcgatgaag gtgatgagtc caagtcaaag attttaaata aaaattataa aatttcacaa      2340
     tatcatcacc ttgaggataa tgattaccca gtgaacaaag attcacttta tactcttaac      2400
     tctttttata atcaaaacat tgttaaacag ttacatcaac aaagccagca acatgatgtt      2460
     cataaaaaca tcaacaaact taaagaatac gtcaaagact catatggtat aaaactagtt      2520
     cctgatacaa ccgttccaat tccaaaagct gttgaatcag agatgaagta taaaccacag      2580
     aagattgaat ttaatactcc aacagagtta acaaatgttc aagataaaaa ctatactgta      2640
     aacatattca atcgtccaaa gatattgaat tctagtaaag aattaattaa cgatgaagaa      2700
     gatgaattgc tttacacaat taaattcgat aaagaaacaa acaaaccaat catctcatta      2760
     ttacatagta ctggtacaag tgatactgct ctcattccga ctctcaaatg tttaatcgtt      2820
     ccaaacagag aaaacatgga taaacccaag attataatta actctcattc caaaggaaaa      2880
     caattcaaat taattctcga tactggaagt aatgttagtt taatcaataa gaggttgatt      2940
     tcaaaagata tgaagaacca cgttcacaaa acgaaagcca agattaactt cccgctacta      3000
     gacgtcaaag aagagtttgt tgaacaaatc aatatacaag ttaacaatga aattcataac      3060
     ttctttatta tagaattgga tatcattgat gtacttttcg gtaatgatat ccttaaggac      3120
     tctatcatta accaaaaaga taaaataatc aagttgaata acagtacata caaaattaat      3180
     tatcaacagt cgaatcaatt acattgtaat gtaaaagctc caagaaaaca tgttaccgta      3240
     tcccaatgat aatcagtcac agtcacataa tctactagat gatgatgaag atatcaaaga      3300
     acaagttaca aagtttgttg aaagcatccc atcacaactt tgtgatatac tggttaaaac      3360
     taatccagaa gaagaagaga tacaagcagt acgtgatttc attaatgatt cattcgaaga      3420
     tgttatagta gataaacttc ctgatattcc agatcagatt aacaattcca gaagaggtaa      3480
     tatcatacat aatatcatat taaagaaaga tcaagatgtt gaaccaacaa agaaacaaat      3540
     ctattattca acagatgatc ataagagaca tgtcgaagaa atggttctca aatttataga      3600
     tttaggtatt atcaaaagat cagaatcaaa ttactcatct ccaatcatgt tattaaagaa      3660
     gagagattca tggcgtgtag tccacgacta tcgtcaacta aataaagtca ctgttagaga      3720
     cgatcatcca ttcactccgg ttgatagtct tttaaatcaa tgtaaagatt caaagctttt      3780
     ctcaaagttt gacatgatta tgggttattt ccaagtgtta attaatccag aacacgcaaa      3840
     gtacaccgct ttcattacac atattggtaa atttgaatat actagaatgc cacaaggttt      3900
     agtcaactct ccatccacat tcgccagatt gatggtcgaa atatttggaa aaatcaaaag      3960
     tttattacaa tactttgatg atcttttggt tcattcaaaa ctcgactaca tggtacattt      4020
     cattgaaatc attagaatgc ttctatattg tagaaagtac ctattattca tttcacgaga      4080
     aaagagtgaa atgttaaaga ctgaagtaga tttccttggt ttccacattc ataaagatgg      4140
     tatatctcca agagctgcaa aggttagagc tatctctgag ttacctgaac caagaaacgc      4200
     caaagaagct gaagctgcat taggtctttt tggattcttc aggagacaca ttgaaaatta      4260
     cgctgaaaaa acctatcacc tttccaaaga atcaaaagga aaaaacaaga aaacactttc      4320
     tgatgaatca ctcaaagaat tcaataatct aaagaaagag tttgaaggtg aaaatattgt      4380
     cgctattcca attgaacaag ataactccat accaatagat atcgaaaagg ttaaagcatc      4440
     aacagacatg ccaatccatt cagataataa taatctaaac aatggtagtt ttcacttgta      4500
     ttgtgatgtt agtgataaag cattatcagg tgtattatat caaattcaag gtaataaatt      4560
     caaagtcatt tggtttcatt gtagaaaact tactgatact caaaagaggt acagcatagg      4620
     tgatagagag ttcctttcaa tcattgattc tctaaagaag tttcaacatt tattaattgg      4680
     taaaaaggtt tcaatctaca ctgatcacca aaatcttaca tatattatca ataagtcaaa      4740
     cgataaaccg ttcacaaaga gacaagataa ttatatgaaa tatattaaag aatttgatta      4800
     tgaattaaga catataagtg gtaaaaagaa tggtatagct gatttcttat ctcgtaaata      4860
     tgataatttc caatgggatg aatcgttttt aaataaaatt aaggaagaac aaatcaattc      4920
     tcaatggcta ttagagatga aaaagaatcc aaatttatgc attgaagaaa ttaatgatat      4980
     ctgttacctt agtgaagatg ggttcaagaa attaatcatc atagataaag aaactattca      5040
     taccgtcatt agagaatatc acgataccaa atatagtggt catcacgctt tagatatcac      5100
     atacaataat ataagacaag attactattt caaagaaatg ttttctatta tcaagaggta      5160
     cataaagtct tgtgcaacat gtcaattgaa cattaaccgt aaagataatg gtatactcca      5220
     aagtttagaa attccctttg aagtttggag agatatatca atcgatttct tatcgctacc      5280
     aaaaacaatg tatgcaataa acggatttac agttgaagtc gatcaagttt gtgtcattgt      5340
     ttgtagatta tctaaaatgg ttcatatagt tccatgtcat aagacaatag atgcccaaca      5400
     tactgctcaa ttattgttga atcatgtgtt cagactccat ggttatccaa gaacaatcgt      5460
     ctccgataga gatccaagat tcctttcaga aatatgggag agatgggcaa agacgatgga      5520
     ttctaaactc aagatgactg tggcacacag agcacaagct gatggtcaaa ctgaaagaat      5580
     gaatagagaa attattagaa tattaactaa agcctcaaca gagtatgggg agaattggtc      5640
     agatatcatt ccacttattg aatttgcaat gaactcatca atgagcaagt ctacaaagat      5700
     gtcaccattc caaatcgtat atggattcaa tccaccaact cccgttaatc atttcaattc      5760
     attaacaaag actcgtatac caatgagcaa catcaaaaag attgtccgtg ataatatact      5820
     agatgctcaa atcaatgctc caaagtatta caaccgaggt cgtggtgatg ttatcttcgt      5880
     agtcggagaa aaggtgatgg ttaaaagaaa attcttccaa actaatcttt caaaagatct      5940
     aatctctcac aaacttgaat ccaagaattg tggaccattc ataatcactg ccgttcatgg      6000
     taataatgta acactcgatt tagtaggtta tccaaagaaa cacaatgtgt tcaacaagga      6060
     tcaaatcgta aaactatacg aggacagtga gtggttaaga gaagagatat cgatgcccga      6120
     acctgaggag atggacgaag caagttacga agttgaaagt attctcaatc acgataaagt      6180
     caaaaagatg tacctagtga agttcaaagg ttacccagaa cctgaatgga tcagagaagt      6240
     cgatacagac tgtgaagagt tagtcagaga gtattggaat aacgtgcaga agaaacaatt      6300
     gaactcaaga agagaaagag agaatgtaac tacagaagca gttgagccaa ttgtgtcacc      6360
     tccactctcc acagaagttc aaagttctca aacattgcaa ccaattactc caagacaaca      6420
     aaactccatc tcaaatcaaa gaaaccaatc aaagaaaaga aaatcaagaa atcaaaatac      6480
     ttcaagtgat gatgatgaac atgatcttag tttacaaatt aaaacaacta gatcaggaag      6540
     aaaagttaca cccaagagtt tatagtccac ctctgagcca tagctggcct aaagaaggaa      6600
     ggggaaggtg ttagagactc aaaactaaat taatttaaag ttagtatgag ctcaacaacg      6660
     taacaaattc gcgcatctcc atgtaaaaat atttcattta atttttattt ttatttttta      6720
     attttttatt ttttcagtca aaaaataaaa aattaaatta aaaaaaataa aattaaatta      6780
     aaatttaaaa aaataataaa aattctgatt tttcggttta gttttcataa cgcccttact      6840
     tttaattatc tcttttatgt atgtttactt ttatgatatt agtctttcac tctttctatc      6900
     cttcatatta aaaaacatta ctttaaagat tggactgttt gataaaagat tgaacaaatg      6960
     tgacaatgga ttgaagatta gtgtgagtga cttttaca                              6998
//
ID   AGM1      repbase; DNA; INV; 5983 BP.
CC   AGM1 DNA
XX
AC   AF060859;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Anopheles gambiae Moose LTR retrotransposon, complete sequence.
XX
KW   AGM1.
XX
OS   Anopheles gambiae
CC   African malaria mosquito.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Anopheles.
XX
RN   [1]
RP   1-5983
RC   [1]  (bases 1 to 5983)
RA   Biessmann H., Walter M.F., Chuan S., Le D., Yao J.G.;
RT   "Moose, a novel family of LTR retrotransposons in the mosquito
RT   Anopheles gambiae";
RL   Insect Mol. Biol. (1998) In press
XX
RN   [2]
RP   1-5983
RC   [2]  (bases 1 to 5983)
RA   Biessmann H., Walter M.F., Chuan S., Le D., Yao J.G.;
RT   "Direct Submission";
RL   Submitted (21-APR-1998) Developmental Biology Center, University of
RL   California, Irvine, CA 92697, USA
XX
RN   [3]
RP   1-5983
RC   [3]  (bases 1 to 5983)
RA   Biessmann H., Walter M.F., Chuan S., Le D., Yao J.G.;
RT   "Direct Submission";
RL   Submitted (29-JUL-1998) Developmental Biology Center, University of
RL   California, Irvine, CA 92697, USA
RL   REMARK    Sequence update by submitter
XX
DR   GENBANK; AF060859; 110.0.
CC   Positions       1    5983  Accession No AF060859     GenBank (rel. 110.0)
XX
SQ   Sequence 5983 BP; 1808 A; 1152 C; 1427 G; 1596 T; 0 other;
     tcgttgctaa ccaaaaccat ccaacgaaaa acacattcaa attgttcgat ctcaaatgca        60
     tgcggttcta ccacagtgcc ggattatggc agctgacgtt ttgtcattct tgtgggtcta       120
     gggacgtacc gctgtgaaag gggaaccgcc tttttgtggc aattgtcacg agccgaagaa       180
     aagcgaagca cgcataaatg gtgtgtgaat aaagaagtga acttacttgc caacaaagaa       240
     caaccgactg attatttcgt gtaaaaaaaa agtaaaaata tcacaacgta gggactttca       300
     cggaacattt tggtgcaagt gaccaggata agtgcctgat tatcggtgtc aattgtggta       360
     atcataatta gtgcaaaagt tctcgcttgt tctttgctgt gtgcgtgtga gtgtgtgctt       420
     ggagctggct aggattttgt gtgcgtgtgc gcgtgtgcaa cgtattaaac agtgtgttta       480
     acgcaagtgt aacaatggcg acggcgcgag aagacaaaat tcgtggcaaa gagcaaaaaa       540
     gaaaaaacat tatagattcg atgcggcgaa tcgatttatt cgtacaaacg tacactgtgg       600
     acaagattca tgaggtgacc acaaggctcg agaggctcga gaaagtgtgg tatggttttg       660
     aagaagttca agaagagtta gacaagctaa cccttgaggg agacaacgct gaaaatgaaa       720
     agacgcgtgc agaaatggag gagctataca tgagtgttag atccaatcgc tacggctgaa       780
     gccatcgtct aatccaatag tcagcgacgt taaaccggta cccattgtgt cccaaatgaa       840
     attaccagta atacaattgc ctgagtttgg aggtgatttt aatgattggt taccatttca       900
     tgacacgttt gtgtccctga ttgataaatc agatgagctt tctggtgtgc aaaagctaca       960
     ttatttgaaa gctgcgctca aaggtgaggc agcacggcta atgagccaat tctcactaca      1020
     gatgagaatt acaaaatgca tggcaaatgt tggtagaccg ctatggcata aacatttgct      1080
     taagaaacgt catatccaag ccattttgag gctaccgaag attatcaata gcaatctaga      1140
     tttattgcga cgcactgtag atgatttcca gcgacacaca ttggtgttag aacaactcgg      1200
     tgaaccaata aaacatctta gctcattcct tgttgagctt cttagtgaga aattggatag      1260
     tgcttctctt gcggcgaggg aagaagcaca agcggataaa agttacacat acagtgacat      1320
     ggttgagttt ctgcgtaagc gtgtgcgttt gttggaaacg cttgctaacg atacgggtga      1380
     aacgagtaag cgacaaccgc gtgtaaaagt gagtgtgaac actgctgcag cggccgagaa      1440
     aaaagtggat atgtgtgttg tgtgtggaaa gcaggggcat acaatagtga attgtcggcg      1500
     tttcaatgaa ttcgatgcaa agaagcgcca cgaagttgtg aggcagcaca aattgtgttg      1560
     gaattgcttg cagggcagcc attttgtaac cagttgtacg tcaaggtatg ggtgtcaaac      1620
     gtgtggcaaa cggcatcata ccttgctgca tgctgaacga agtagtagtg taatagcaga      1680
     tgattcggtg ggttctgtta gtacgatggt gcttgctaat attccaatgc agtgcaactc      1740
     tactgaccga agctcatatt ctaatgttat gctgacaacg gtggtgttgt ttgtagttga      1800
     cgcaaatggt acgcaacatc cagtacgtgc gttgttggat aacggtgcgc agcccaatgc      1860
     gataagtgag cgattgagtc agcttttgtg cttgcgcgta tgcgtaccca tgtatccatt      1920
     acaggtgtgg atggaacgac gactcaggcg tcatgtgaaa tgaaggtgga aatccgttcc      1980
     agatttacgc aatttgctct gaaactaaat ttcttggttt tgagcaaggt aacagcaaac      2040
     actccagcca catctttctc cacatcatgt tggaaattac ctgctgggtt ggcgctcgca      2100
     gacccagaat tccatcagtc tggacgagtg gatatgctaa tcggtgcatc gcatttctac      2160
     acgtttctga gggaaggccg gctcaaactt agtgaacatg gtccattgtt agttgaaaca      2220
     gtgttcggtt gggtggtaac aggtgaagtg ctccgagaag aagctataat tcagcaacaa      2280
     gcagctcagt gtcatgttat gttatcgtcg gaaaacatta gcgatcaact tgagcggttt      2340
     tggaagatcg aagagctgca tgtttcgcat ttctcggcgg atgagcagag atgcgaagct      2400
     tattatgagc aaacggtatc acgagacgaa acaggcagat atatcgtgaa actgcctaaa      2460
     catcagcaac attctaccat gattggaaaa tcagaaacga catcacttaa gaggtttgct      2520
     ggattagaac gtaagttatt tgctaactca caacttcgtc agcagtacaa tgagtttatg      2580
     ttggagtaca tacaactcgg tcatatggtt cctgtgtcgc ctgacaacct ggatgcagca      2640
     acctgctgct accttccaca tcaccctgtg tttaaggaga caagttccac gactaaaatg      2700
     agagtggtat ttgatgggtc agcaccaact agcacaggac actctctgaa tgatgcgcta      2760
     ttggttggac cagtcatcca agatgatctt ttgagcttaa taatccgttt tcgtaaattt      2820
     caggtcgcgc tagttccgga cttggaaaaa atgtatcgtc aggtacttgt gcatccggag      2880
     gatcgaccgt tacagagata tggtggggcg tatgagttgc ggacagtaac atacggtttg      2940
     gctccttcat ctttcttagc tacaagaaca cttcagcagt tggctgaaga tgagggtgac      3000
     gcgtttccta ctgccaagga tacgctgaaa aaacaactgt acatggatga ccttattgct      3060
     gggtcaaata gtgttgatgg agctatacag ctacgtgagg aattgagtgc actggcgcag      3120
     agaggcggtt ttacttttcg aaaatggtgt tcgaattcat tagccgtttt atctgacgtt      3180
     cccgctgaac aattggcaac aaaatcatcg ttaaggttcg acgacaagga gacaattagt      3240
     acgcttggta tatgttggga accagaaatt gatacgttcc agttcaacat ttctattact      3300
     acgaaatcag agagagacac catgcgtacg atactatcaa tgattgctga actgtatgat      3360
     ccattgggat tgatttcacc tgtaattatt acagccaaag ttttgatgca atcgctctgg      3420
     cgtttgaagt tgagttggga tgatacggtg cctgaggaac ttcaaaggaa ttggattaga      3480
     tttcgagcag aattaccaga acttaaagat tttagtatcc ctagattcgc tttcgctcat      3540
     caatatcggc aagcagaaat acattgtttc acagacgcgt cagagcttgc atatggcgcg      3600
     tgcatctata ttcggtctga agctgaggat ggaagcattc atgttaattt gctagcatca      3660
     aaatcgagag tggctccact gaaggcattg acgattccta gacttgaact ttgcggtgca      3720
     ttattaggag ctcgattgca tgagaaggta atggctgcaa tggagattaa gttcgttgct      3780
     catcgatttt ggaccgattc taccgtggtg ctagattggc taaatgctga atcaaagact      3840
     tggaaaacat tcgtagcaaa ccgagttgct gagatccaag caattcgaga tgctgtttgg      3900
     caacatgtat ctggacaaga aaatccagct gaccttattt cacgcggagt tttaccgcat      3960
     cagctcatca acaatcaatt gtggaaacaa ggtccacaat ggttatcaga gagaaaggag      4020
     aattggcccc aacaaaaaga gagaacaggt caaattacaa cagacgaaat aagatcgaat      4080
     gtcgttttaa caacgcaaat acaagaaaaa aatgaaatat ttacaagata tgggtcatac      4140
     cagaagctaa tcgacgtggt tgcatattgt tttcgttttg ttcataatgc tcgtcgtctg      4200
     caatcaagaa taagcaatag tgcattgacg gtaaaggaac ttgctgatgc taaaaagcga      4260
     cttgtaaaac ttgtgcaagc tgaagaattt accaacgatc tttataaaat ccacaagggg      4320
     attcctgttg ctcgaaattc aacgttgaag cttttaaacc cgtttataga taatgaagga      4380
     ataatccgcg taggtggccg gctcagaaat tctgatttga attataatat taagcatcaa      4440
     atagttcttc ctggattcca tccatttact caactcctca tcatggacaa acatgtaaaa      4500
     gcaatgcatg gaggaatatc atcaactctt aacgcagtta gagatgagat ttggccaatc      4560
     aatggaaaaa gagctgtacg taaggtcata cgaaattgtt ttcgatgttg cagagcaaat      4620
     ccacaaccta taattcaacc tgaagggcaa ctaccagcag aacgtgttac agttaacgag      4680
     gtgttcagtt gtacgggtct agattattgt ggacctttgt atttgaggcc aacacaccgc      4740
     aaggccgcac caaataagtg ctacatttgt gtatttgtct gcatgagtac gaaagcagta      4800
     catttggaat tagtcggaga tttgagcaca aattcgtttc tgatggcact tgatcgcttt      4860
     gtttatcggc ggggtaaacc aaagcacatt tattcagaca atggtaccaa ttttattggt      4920
     gccaaaaatg aacttcatca gatctacaaa atgctgttca acgattctgc agatagcaaa      4980
     atagcaaaac atttggcaaa agaagagata caatggcatt tgataccccc acgcgcccca      5040
     aatttcggag gcctttggga agcggcggtg aaggtagcca aaacccattt gattcgtcaa      5100
     ctaggatcat cgcgtttatc atcggaggaa atgactactg ttttagtaaa aatagaaggt      5160
     tgcatgaact cgcgaccatt agttccgctt tctgaagatc ccaatgattt gacggcatta      5220
     actccagcgc actttcacat tacaaacaat ttgaaggtta ttctcgaacc tgacttgaaa      5280
     gaggtgccta tgaatcgtct gggaagatac caactccttc acgggtacac gcaaaacttc      5340
     tggatacact ggaaacagga ttatctgaaa aatcttactg ttttgcatcg gtcagctaag      5400
     caatctaagc aattatctgt cggagatata gttattctga aggatgagca gcttccagca      5460
     gttcaatggc cattggcacg tgtcgtcgaa atacaccctg gagctgatgg aatttcccga      5520
     gttgcaacac ttcgtacggc atccggtatt gtgaagcgag cagtatctaa aatctgtccg      5580
     ttacaatgca gtaatcaaag aatggattga aaactgagtg tttcaaggtg gccggtatgt      5640
     tcgatctcaa atgacctgcg gttctaccac agtgccggat tatggcagct gacgttttgt      5700
     cattcttgtg ggtctaggga gctaccgctg tgaaagggga accgcctttt tgtggcactt      5760
     gtcacgagcc gaagaaaagc gacgacgcat aaatggtgtg tgaataaaga agtgaactta      5820
     cttgccaaca aagaacaacc gactgattat ttcgtgtaaa aaaaaagtaa aaatatcaca      5880
     acgtagggac tttcacggaa cacaaattaa ccagcaatca aatcaggtga gacagaaaac      5940
     ctaccatgca ataaatgctt agcacacaca aaccgtagac agg                        5983
//
ID   LDT1      repbase; DNA; INV; 5677 BP.
CC   LDT1 DNA
XX
AC   AF081103;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Lymantria dispar non-LTR retrotransposon LDT1-4 putative
DE   gag-related protein and putative endonuclease/reverse 
DE   transcriptase genes, complete cds.
XX
KW   LDT1.
XX
OS   Lymantria dispar
CC   gypsy moth.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
OC   Ditrysia; Noctuoidea; Lymantriidae; Lymantria.
XX
RN   [1]
RP   1-5677
RC   [1]  (bases 1 to 5677)
RA   Garner K.J., Slavicek J.M.;
RT   "Identification of a non-LTR retrotransposon from the gypsy moth";
RL   Insect Mol. Biol. (1998) In press
XX
RN   [2]
RP   1-5677
RC   [2]  (bases 1 to 5677)
RA   Garner K.J., Slavicek J.M.;
RT   "Direct Submission";
RL   Submitted (31-JUL-1998) NE4509, USDA Forest Service, 359 Main Road,
RL   Delaware, OH 43015, USA
XX
DR   GENBANK; AF081103; 110.0.
CC   Positions       1    5677  Accession No AF081103     GenBank (rel. 110.0)
XX
SQ   Sequence 5677 BP; 1508 A; 1744 C; 1226 G; 1199 T; 0 other;
     agactgaatg ctagtatata tacaccgcct tttgctgtct attcaatcat tccgcgtcgg        60
     agactcgtag cgcacggacg tgcgcctcgc tgctctccat ttcgccgcgc tcaccccgca       120
     cccgccccct gcggtcgtgc gttctcgctc cgtctcgctc gctctcgcag cgaaccacgc       180
     gtcgcgtcaa gccgccatct tgttcaacgt ctgtggccgt tcagtggccc gctccgggtg       240
     gccgtgtata cggttgtctg tggcagtttc gctgtttgga cgcaggtgtt gccggatccc       300
     aactgcacga gtcgactttt tcaagacgtc gagtgcagat ttctaccgtt ggtagataaa       360
     aagtcaacct attttggccc cctcagggta gaaaaccata ttgtttggtc cccggcggaa       420
     acctcacggt gtcaacgaag ccgggtgagg caaggccccg atttgcctgc cgagcccctc       480
     cagggcagag ctaacaatcg gaaggggtta gagcatccgg ccttggggga tctcctagtc       540
     ggacctaatc tacggctttt caacattttt ctgcgaaggc ctaacggccc gagcagctag       600
     gaacctatcg cacattaaga ttggcgaagg attacaagct tagggcacac taattaagta       660
     ctcatcctcc cgacctgcac ccggttggga gggacacgca ccacacacaa cccagggtat       720
     cccacccagg gcgctaggtt ttttacatcc ctcttagcta tcgttttttt ccgttagccc       780
     acgatggcgg aaaaaaccat cactatagac gcccttctgg caattccaga aatcaaagct       840
     tatatcgctc aacatttcgg agcgataacg atccttcctc cgcaacccaa acccgctcga       900
     tccaccgccc agccgctcga accggaacta ccggccgtcg gtacggcgat ggaaacggag       960
     ccggtcttgt cctcctcaaa ctcgtcttcc tcctcctcct ccgagtcgga agattcgtcc      1020
     aatgagggct cattcattga ggtccgctct cgcaaacgga gcaaaaggac caaaaacacc      1080
     aaagaggccc cctctaagac cccaaaaatc aagcagactg actcggcaac aacatctgcc      1140
     gcagccccgc ttgcaacgac cgccacggcc gctccggccc ccccagtcgt ctcacaggca      1200
     gccctaaccg ctgccccacc acctacggac agcaataccg tcgccccacc gacggtcaaa      1260
     aaatcactcg ctccgccgcc cctatatatt agggacaagg acaagtggct agccatctcc      1320
     gcatggctaa acactaacag gatttcgtat aaatctgcga aatccacccc ccaaggtata      1380
     cgagtggacc ttcactcgtc agccgaccac cgatctgtat caaaaatgct agggaatcaa      1440
     cagattccct accatacgta caccctccct gaagccaaac ttctgcgtgc tgtaatacgc      1500
     aacgtaccga gggaaataga gaccaaagag attctagaat ctcttaaaac ccaggatcta      1560
     ccggttgtag aagtacaccg gatgatccgg ggtaggggtc gttatcccct caacatgata      1620
     ctcgtctgcc ttacaaataa cgcagagggt aaaggcattt ttaaaattaa gaccatctgc      1680
     ggtctatctg gggtctcggt tgagccccca cacaaaaatg gcaacctggc acaatgccac      1740
     aagtgccaac tgtatggaca atcgtccaaa aactgctttg cccgtcctag gtgcgttaag      1800
     tgcctaggtg accatcacac ctctcagtgt gaacggccaa aggacatctc actctgcaaa      1860
     gagccaccag cgtgtgttct ctgtggagaa tacggacacc cggctaacta ccgcggctgc      1920
     ccaagagcgc cgaggaggtt agtccgccag cccaacacaa acggcaaggc cttgtactat      1980
     aacaagacct tcgtcccagc ccccttacca acccacaatg cgtgggctcg ccccctgcta      2040
     aacagcaagg aggctttccc aaccctgccc aacaggcagc ccgctgcccc acccgcaaca      2100
     tctcaactca aaccaccaac aaccgggcca aaccagccca ctggtggtaa tcccaagccc      2160
     cctcagggcg cccctattcc tatcgtcgtc gctaaaagcg cgcccccaaa agccccccaa      2220
     ggactagatc cagatctagc cctggtggcc aacttcgcag ctcaaatcaa tttcacggaa      2280
     atccgcgaaa ttgcagccga attaagaagg aacgagggaa acaacctcgc cctccttaat      2340
     accgcaatta aattttcccc cacgttagag cgtctaggct cgcttaaatt caaataaaat      2400
     ggataggtac actccaggca gagttaaacc cagacacctc aaaataggga cattcaatgc      2460
     caatagccta acccaacaga aggatgaagt aggcacattc cttcgggaac accagctcga      2520
     catcttgcta gtacaagaga cgttccttaa accatttaac aaggacccta gagtcgccaa      2580
     ctataatata gttcgcaacg ataggacaac ctcaccaatg ggcggaacgc ttatctacta      2640
     caaaaggtcg ctgcattgca cacctgtgga tccgccccct ctgatgtaca ttgaagcttc      2700
     aatttgcagg ctagccctct caggccatca gcctatcacc cttgtatccg catatctctc      2760
     tcccaataga gaacattcga aacagttggt tgaaaaagat ctaaaagcct tgctagaatt      2820
     gggaggcgcc gtcatcattg gcggtgacct taacgccaag aacacctctt ggagctgtca      2880
     aagttccaat aagaggggca agactttaga gctattcgct gacagactgg gatttgatgt      2940
     catagcgccc atagagccga cacacttccc ctttaacgtt tcgcacaggc cggacatact      3000
     cgatatcttt cttctcaaaa acataaacct tcgtttatgt tcaatagaag ttcaacacga      3060
     gttagactca gatcaccgcc cggtgactct ggaattagcc tcccgcaccc ccggcccctc      3120
     aggccacaat aacgaaagga ccaagatagc gactgactgg gcacggctag agaaaaatct      3180
     caagtcaacc tcgtcggtcc accttgatca aattcccaaa gacattacgt ctaaggaaga      3240
     gacctctcag gcgatcgact cgctcacaag tcacgtgcag tcgataatgg acgactgctc      3300
     gcggccggta ccagatacga gcgatcgtaa atggcgcctg ccagacgacg tccgtgactt      3360
     gttgagacgg aaaaacgccg cgacacgcgc ttatgaccgc taccctacgg aggacaaccg      3420
     tacccgccta cggtcactcc agagggaggt taaacaagca attaaaaaat tgagacagag      3480
     caaatgggac gccatgatcg aggagctaga accctctcac acagcctttt ggcagctttc      3540
     ccgctcactc aaaaaagaca tcgtgtccac tctccctcct ctcaccagac ccaaccagcc      3600
     tccggcattc atggacgatg aaaagtcaga atgcctggcc gactgcttag agcttcagtg      3660
     tacgccgagt acactacacc ccgacgccgc gaatcaccgc ttcatcgccg acgaagtgga      3720
     acgtcgtaac actctctcgc gctcgttagg aaacgacagc cccgatcagc caatcccagc      3780
     agtgaccacc gatgaggtcg aatcgttagt caggggtctc aaaaccagga aagccccagg      3840
     ttcggacgga atctcaaata aagtcattaa actattcccc gcccacttga taatcctgtt      3900
     gtgctgcatc ttcaatgcag cactaaataa taacatcttt cccgcgcaat ggaaagaggc      3960
     cgtggtaata ggaatccaca aacccggcaa gcgccgtacc gaacctagta gttaccgccc      4020
     gattagtcta ctaagaggtc taggtaagat ctacgaacga atagttctca gtagactacg      4080
     tacattcgcc gaggctaaca acctcgttcc cgacgcacag tttggcttcc gagctaaaca      4140
     cagctgcgta caacaagttc accgtttggt agaatacaca agtagtcagt tcatcatgaa      4200
     cagatatacg ggtgtattat tcctagacgt agcgaaagca ttcgacaagg tttggcatga      4260
     aggcctaatc tacaaactct atctcctcaa gatccctcac tacttaattc acattataca      4320
     tgactactta agtcatcgca gctttcgcta cagggtggaa gggacgttgt cgacctccca      4380
     ccctatcaag gccggcgtcc ctcaggggtc ggtcctctcc ccatttctct tcacgctata      4440
     cactagcgat atgcccaaat tcaaccgggt acataaagcg ctttacgctg atgacaccgc      4500
     actcttttgt gctggtagat ccccgacaac agtagccagg actctccaaa cagcggttac      4560
     cgccctagcc aattggttta ggaattggag attagaaatc aaccccgaga agagtcaggc      4620
     ggtcatgttc actagacgaa ctgcccgttc ctactctatc gatagcattc ccccccttaa      4680
     aattttcaac aagccggtca cttggaccag gcaggccaaa tacttgggtg tgacccttga      4740
     cgatcgactc agcttcgccc ctcacataaa gaaagtccgc gcacgggcag cctttgtgat      4800
     gggccgtctc cactgtctac tcaactctag gtcgcgtatg cccctgagta gcaaagtccg      4860
     actttacacc acctgcatac ggcctatcat gacctatgcc agcgtggtgt tcgcgcatgt      4920
     taagccacac aggatccaca ggctacagac actacaaaat cgtttcatgc gccgagctac      4980
     gggagcaccg tggttcatac gaaacgtcga tctccacatc gacctcgaac tgccgaccat      5040
     caagcagttt atgaaacggt gctctcagag ctactttgac tctgccatga cacaccccaa      5100
     ccaactagtg gttggggcgg cttcctatag accctccaaa atctcctcca tccgacgtcc      5160
     tcgtcacgtc ctcgacgaag aggacgacat tatcacactc gctcaacaaa gagcctacac      5220
     ggcccgcgag gccttaacaa ataaatatcc gcggttccgc cctcgccgtc gaggtgcgaa      5280
     accgcgccgc gcaaaagtca ctaccaaaaa cgtgggcacg tccactttgc ctccagcgac      5340
     gccccaagcc gaggtccgtt ccccacaggg ggagcccttg ggcgatgtcg cttagcatac      5400
     ttttctccgg gttgagagcc ctcagcgctc acccatagtc cgcgtcaagc tgtcaaggcc      5460
     atctgcggcc agcagctgta cacacaaaaa aaaaaaaaaa aaagtctatt cattcagtcg      5520
     acatacgata tcagctcgca cactcgtacg gtcgtcacta gttctattat caatttattg      5580
     tacataattt atgaaatgta aataaatcgt cagtcttaga aataactctc tacgttcttc      5640
     ttcgccttct tctcacatct tcattcgcca accacaa                               5677
//
ID   HOMER     repbase; DNA; INV; 3789 BP.
CC   HOMER DNA
XX
AC   AF110403;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Bactrocera tryoni transposon Homer putative transposase gene,
DE   complete cds.
XX
KW   HOMER.
XX
OS   Bactrocera tryoni
CC   Bactrocera tryoni.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
OC   Muscomorpha; Tephritoidea; Tephritidae; Bactrocera.
XX
RN   [1]
RP   1-3789
RC   [1]  (bases 1 to 3789)
RA   Pinkerton A.C., Whyard S., Mende H.A., Coates C.J., O'Brochta D.A.,
RA   Atkinson P.W.;
RT   "The Queensland fruitfly, Bactrocera tryoni, contains multiple
RT   members of the hAT element family of transposable elements";
RL   Insect Mol. Biol. (1999) In press
XX
RN   [2]
RP   1-3789
RC   [2]  (bases 1 to 3789)
RA   Pinkerton A.C., Whyard S., Mende H.A., Coates C.J., O'Brochta D.A.,
RA   Atkinson P.W.;
RT   "Direct Submission";
RL   Submitted (01-DEC-1998) Entomology, University of California,
RL   Riverside, CA 92521, USA
XX
DR   GENBANK; AF110403; 110.0.
CC   Positions       1    3789  Accession No AF110403     GenBank (rel. 110.0)
XX
SQ   Sequence 3789 BP; 1254 A; 651 C; 687 G; 1197 T; 0 other;
     cagagatctg caacggacac acaatttccg tgcacactcg aacacttacc caaaaccggc        60
     ttgtatcgct ttctttgaac gagcagaagg attgctcgtt agcgactgtg cgcacgcgaa       120
     cgtgctgatc acaacactcg agtgtcgtgc atacgtgttc gtttgggttc gggtgttttg       180
     cgaatcaata tgttcgagtg tccgagtgta ggctcgagtg tccgagttta ggctcgagtg       240
     tgcaaagcat tttttgttta tgtataatcg ttagtacagt tgattaattt gctttgtgag       300
     tgttaggaat tttatatgat acatattaca tgatatatat tgaaaataat ggccgaaaaa       360
     gaagattcta ttggttgcaa aattgcgaat ggcagttaca gcttgtctgg taagcgcaaa       420
     ggccgaagtt tcgtatggaa tattttatca gaaattttga aaccggacgg aactttactg       480
     gaaggttttg tttactgccg cacttgctta aaagtattga aatattataa tggtcagacg       540
     tctaacctaa ttcgtcaccc atgctgcaga aatattaaaa catcacaaga attaagaacc       600
     gtcacggtgg aagacaagaa tgaagctgta aaaaaattta catcctgggt tgttgaagac       660
     tgccgaccat tttcggttgt gcaaggctca ggctttataa aacttgtgaa attcttcata       720
     aagataggtg catcgtatgg cgaacacgtc gatgtggagg atttgttacc gagcgcaaca       780
     acaatttccc gcaatgttca aaaatgtgca aatgaaaaaa aagaagaact taaagaagaa       840
     ataaataata ttgtgagcag cggtggagct tcagccacaa tcgacatgtg gacggataac       900
     tatgtgaagc ggaacttttt aggagttacc ttccactacc aaaaagactt gaaattcttc       960
     gacttggttt tgggaatgaa atctatgaat tatgaaagtt cttcgggtga caatgttctt      1020
     aataaactta gcagtatgtt taaagaatat ggtgttcaaa atatgagcca aattaaattc      1080
     attactgaca gaggaagtaa tatggttaaa gctttaaaac aaaatatacg tcttaactgc      1140
     agtagccatc tattttccaa tgtattggac aaatcattcg aggagacaga agagcttaca      1200
     gatgtgttag cttcttgtaa aaaaattgtt aaatatttta agaaagcaaa tttacagcat      1260
     cttctaccca cttcattgaa atcccaatgt cctactcggt ggaattctaa ttatggaatg      1320
     attaaatcca taattgacaa ttggtttgaa attaacaata taatgactga taatgaacaa      1380
     agccaacgat tattacacgt aaatgtatcc attcttaaag ttttggtttc aatgtgcaaa      1440
     gattttgaaa ctgtattcaa taaattacaa ctttgcagtt ctccatcgct atgctacgtt      1500
     cttccgtcca ttttaaaaat aaaaaacatt tgtgaattta ataatagtga tatagctgca      1560
     atttcagtct taaaggagaa tataagaaaa aaaattgagg aaatatgggt tgtcaattta      1620
     agtatatggc ataaggttgc aactttttta tacccacctg ctataaatat gcagccaaat      1680
     gatttggatg atataaaaaa tttttgcatc tctcaaattc aaaataatgc aatatcagca      1740
     ccaacttcag caacatctgc gggaaacgat tccttaagcc caaccgccat ctcacctact      1800
     ttgacaacgc atttttcttt caatgaaagt aaccaaatag atcaaagcca ttcttcttct      1860
     ttatgttcaa aaactggagg cgatacattc tttttcactt atttggttaa acgaaccacc      1920
     ccacaagcca cagaaaagcc tgaagatgaa gttgagagat atagcagaga agaggtagag      1980
     atgactgaaa attttaattt gatggagtgg tggcaaagta atcagagtaa atacccccat      2040
     ttatcaaagt ttgcattgca gattcatgca atcccagcca gcagtgcagc tgcggagaga      2100
     tctttttctt tagctggcaa cttaattact gaaaaacgta acagaatagc gccaggctct      2160
     gttgacagtt tgctgttctt aaatacatat tataaaaact ataatgctta atggttggga      2220
     gttatatcta aagtatgcgt gcaatgatag ttttataaac atattttcct ttatttatat      2280
     ttaatttcaa gagtgataaa aagcatggaa tgcgtttttt ttaatgattg aatgattgaa      2340
     atatcttttg tttatgcgaa gactgattta ataaaagtat attgaagaat gaaaacagaa      2400
     gtttttataa ttatataagc atatttgtcg ccaagaggtt tggcgggaca ggttattgaa      2460
     aacgtggtca atacccccaa aagtggacgt atgggcatcc tactctaggt tggatatttt      2520
     cattcattta aaaagtatta taatctgcaa taattcagaa tcacgatcac gcaaacaaac      2580
     aaagagtgtg aaactttgca ttatacactt cagaactcaa acgcattttg tacggacatt      2640
     catcttaaaa ttattttaat ttcgtatgac acttttagca agcttaggca gctaagatat      2700
     atacatttat atatttacat atatattcct tgcgctcgct atgattagga ataagcgaaa      2760
     tcttaaattt aataaactta tactagcaaa aatcaaaata tcattgctca tataaattcg      2820
     tatataaaat gtatgctaca attactatat agtagtccaa aaatatgaat tcttattttt      2880
     cacagaaata cttttgctaa aaaaggatct ttttcttttc ttatttttcc cagaaataca      2940
     tttgtaaaag gatcgtaatc cttttttatt ttcctcataa aagatttaaa cagttcaaga      3000
     gctcaaaaca tgcgctacat cagctaccta ctaaattttt caatagctca aagcatgcgc      3060
     tacatcagct cgaacctacc taccctacgc ctttgcgcaa atgattatct tatgataaca      3120
     aatgcccaca tatagatttg gcaatggcaa tagcaataga tttgacagtt agcaagacat      3180
     agattttatc ctgtcgagat gccccgtaag taagtatgaa tgtacatata tctatactag      3240
     ccactctctt tattgattgg tttttcccaa aacacaaaat gcagttgcag tcaagtcaca      3300
     ctgcttggaa acacacgtat gcatgtaaaa aagcaactat cattattctt ctctgattct      3360
     taactgggtc ttatgttatg gttatgcaac tatattttta attttaaaat gcgtcattcc      3420
     tttgatacat gcatacatat agtttaaatg ctgtatttca atgatattgg ctgttaaagt      3480
     gtatacagca ttaataattt ctcatatttt tgctcagaaa aatgtgatac acttcttcta      3540
     catccgtgtt ctgtccgagt atccgtgcaa tagttgaaca aatttcgggt tagcttcggg      3600
     tgtcgagtgt ggacactcgc ttgtgatcgt tttgaagaga gtatgatcga acagactcga      3660
     acacacagaa agcagctgcc gggtgtgcca ctcgatcgaa cccattgctg ccgagtgtgg      3720
     cgctcgctcg tgctcgattt ttaatgaggg tgatcgaaca tgttcgaaca cacccaatgc      3780
     agctctctg                                                              3789
//
ID   ANM4      repbase; DNA; INV; 1885 BP.
CC   ANM4 DNA
XX
AC   AF126012;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Antheraea mylitta mariner transposon Anm4.2 transposase pseudogene,
DE   complete sequence.
XX
KW   ANM4.
XX
OS   Antheraea mylitta
CC   Antheraea mylitta.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
OC   Ditrysia; Bombycoidea; Saturniidae; Saturniinae; Antheraea.
XX
RN   [1]
RP   1-1885
RC   [1]  (bases 1 to 1885)
RA   Nagaraju J., Prasad M.D., Nurminsky D.I.;
RT   "Cloning and characterization of mariner-like elements from
RT   silkmoths";
RL   Unpublished
XX
RN   [2]
RP   1-1885
RC   [2]  (bases 1 to 1885)
RA   Nagaraju J.;
RT   "Direct Submission";
RL   Submitted (03-FEB-1999) Centre for DNA Fingerprinting and
RL   Diagnostics, CCMB Campus, Uppal Road, Hyderabad, Andhra Pradesh
RL   500007, India
XX
DR   GENBANK; AF126012; 110.0.
CC   Positions       1    1885  Accession No AF126012     GenBank (rel. 110.0)
XX
SQ   Sequence 1885 BP; 582 A; 396 C; 372 G; 535 T; 0 other;
     atccccggga aattctcgat caccacggcc atagactgca ccacaatacc gagaagagtc        60
     gcaggtgcgt tggcagcttg ttttagtggg aagggtgagg gagaagagga agaagggata       120
     aggagggata taggtttcca gcgtggcgtt aaaaatgtaa agaaaattct ttatttttca       180
     taacataata ataagtcttt acctatgaaa ttgccgttct gcagtactgg cctctcaaat       240
     caaaataatt tttgtttggc taacaattct aaattcaaat taattttatt ttaaaaacat       300
     ggaattcttt tttccaaaat tagtcatttg tttattgatt actgttacat tttcatcgca       360
     ttttcaatct tttttgtcgt catggatacg ttaaaaattc gaataattat ggaatatgag       420
     taccgtcgtg gcagcaacgc ggcacaagag gcacgcaaca tgtcattgac gtttacggag       480
     ctaacactac aaaccaacgc acaacttgtt attggtttgc tcgctttccg ttttgggaat       540
     ttcgacctga aaaatgaacc tcggggtcgt ccgaagacta tggtcgacaa tgacgaatta       600
     aaggcgattg tggaagctga tgatacacaa tctacggcta aattagcagc agctttcgac       660
     gttagcgtca aaacaatatt ggtctatttg cgtgaaattg gcaagggtaa aaaagcttta       720
     caggatgggt gctccacgaa cttcaatgat tcgccagcgc gaagtacgcg tcgagacgtg       780
     ccttgcacta ctcaacagac acacaaatga aggaattttg aaccgcattg ttacctgcga       840
     tgaaaaatgg actctgtttg ataactgcaa gcactcagca agttggttgg atcctgttca       900
     gcacctaaat aatgccctaa acgagaactt actcctagaa atctgatggt cactgtttgg       960
     tggtgtagcg ccggtgtgat tcatcacagc ttcttaccaa acgtggtgag cattactgct      1020
     gatatgtact gtgaagaact gaacccaatg atggagaagc tggcacgtct ccaaccagca      1080
     ttggtctaaa ggtctctccg ctgttcttgc aagacaacgc acgacctcat actgcacagc      1140
     agacggtgtc taaattgcaa gaactggggt tggaagttct ccgtcatccg cccttactca      1200
     cctacagaat actacttttt ccagaatttg gacaactcct tggcgggaaa atgaattcaa      1260
     tacccgagag gcagacaaaa tgcctttgaa agaatttgtt gcctcccgtt cagctgattt      1320
     ctttaagaag gacatcaata aactgccact gcgttggcga agatgcattg attgcttagg      1380
     tgatttcttc gattaataca aaaaaaatta catgaataaa attcgtttaa atttttcata      1440
     tacaacggca atttcataga taaagaccta tagataatgt tacatgaaac gcaatatgtt      1500
     tactaatata ccaaattatg cttatgtgta gtaaaagtaa aaacaataaa tattatgtaa      1560
     caacatatta atttagattt ttacatatcc ccattccccc attatgtatc ttttcaactg      1620
     ttttccattt tttttttatt gtagcacggc aaaattactg cactatgcct gatgataagc      1680
     acagtgcaat ccaaatataa tagccgacca cccgattccc cacactatcc atcgcccggt      1740
     cgtccactat ccccccgggg ctgggaaaaa cccggaaatt gccaggggga atttccccaa      1800
     aaaccacaac cccccaaaaa aaaaaaaaac ccctttttgg ggttttcccc aatacattgg      1860
     tggttgcaac catcaggctg ttgaa                                            1885
//
ID   DIRS1     repbase; DNA; INV; 7053 BP.
CC   DIRS1 DNA
XX
AC   M11339; K00624;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Slime mold (D.discoideum) transposon DIRS-1, complete, clone SB41.
XX
KW   heat shock protein; insertion sequence; retrotransposon; reverse
KW   transcriptase; transposon; DDIDIRS1A; DIRS1.
XX
OS   Dictyostelium discoideum
CC   D.discoideum (AX-3) DNA, clone SB41 [1],[2],[3],[4],[5].
OC   Eukaryota; Dictyosteliida; Dictyostelium.
XX
RN   [1]
RP   1-7053
RC   [1]  (bases 4520 to 7053)
RA   Zuker C., Cappello J., Chisholm R.L., Lodish H.F.;
RT   "A repetitive Dictyostelium gene family that is induced during
RT   differentiation and by heat shock";
RL   Cell 34, 997-1005 (1983)
RX   MEDLINE; 84026505.
XX
RN   [2]
RP   1-7053
RC   [2]  (bases 14 to 7053)
RA   Cappello J., Cohen S.M., Lodish H.F.;
RT   "Dictyostelium transposable element DIRS-1 preferentially inserts
RT   into DIRS-1 sequences";
RL   Mol. Cell. Biol. 4, 2207-2213 (1984)
RX   MEDLINE; 85061212.
XX
RN   [3]
RP   1-7053
RC   [3]  (bases 1 to 371; 4520 to 4873)
RA   Zuker C., Cappello J., Lodish H.F., George P., Chung S.;
RT   "Dictyostelium transposable element DIRS-1 has 350-base-pair
RT   inverted terminal repeats that contain a heat shock promoter";
RL   Proc. Natl. Acad. Sci. U.S.A. 81, 2660-2664 (1984)
RX   MEDLINE; 84194066.
XX
RN   [4]
RP   1-7053
RC   [4]  (bases 56 to 4869)
RA   Cappello J., Handelsman K., Lodish H.F.;
RT   "Sequence of Dictyostelium DRS-1: An apparent retrotransposon with
RT   inverted terminal repeats and an internal circle junction sequence";
RL   Cell 43, 105-115 (1985)
RX   MEDLINE; 86079481.
XX
DR   GENBANK; M11339; 110.0.
CC   Positions       1    7053  Accession No M11339       GenBank (rel. 110.0)
XX
SQ   Sequence 7053 BP; 2392 A; 1447 C; 1148 G; 2066 T; 0 other;
     aagcttcttg ttcccaaaga aaagaagaaa agtgtaatca aggaaataag aactttttat        60
     attatcatat atatatatat attatgaata acatttattt atttgaattt cccaaatatt       120
     taagataatt ttttagaatg ttctagacat tcgaagaata aaaaattttc gaaagaaaag       180
     taaaaattcg aaccggcaca atgacgcgat aattgcgcaa ggtcgaaaaa ctgaaaaatt       240
     ccgaaccgag actatgcaca aatttgtgaa gggtcgaaaa ctcttatttt tttgagtttt       300
     gcgaaatttt aagaaaataa aaacgtataa tagtggcact aaaaactaaa accattttta       360
     tttgggaatt cctcctatat atatttaaga tacacacaca cacaaatttt atacaaataa       420
     ttatttctct ttattaattt ttaatattat tatttttctc atattataat tttagatatc       480
     aacaataaaa tatgtctacc actgttaata ataatgatgc ctctagtagc aatacctctg       540
     cctctaatag cgctgaatcc tttgatttaa gaatgaaatc aatggaggat caaatcaaca       600
     acctttcctt agcctttaca agattcatga aagaacctat gttctcatca aataccaatt       660
     cacgtagcca accttctcat gatgactcta acaccgagaa tgaacaaagt gaagatgaat       720
     caagtaacaa tgtcgatgtt ccaaccgatt atcaattatc cgatacctta cttggtcagt       780
     acaaacatat ggtaaacaat caaggtttac ttgtcgaaga agaatgtatc ctcaagagag       840
     atgagatatc cgaattgaat aaagtattca actttccatc aaacttccaa gtgaatgtcg       900
     ctccattcgg tacacctgaa ggtattactg tatcatccaa cgtcaagaac aatgatactg       960
     acttgttgag tgttgaaaag cgaatcaacg atagcttgaa acctttgctt cttatgtcaa      1020
     gtatgttatc atctgatagc tccaatgtcg atgtagaact tattagttac ttaactcaga      1080
     gtgcaatcgt cttagccgtt aacactcaag catcgcttag tcgtgtccgt cgtaacaaca      1140
     tcgctaaaga aatctatggt tctgaagtac tcttaccaat taagatcaag gatacaccaa      1200
     agatgtttga cgaaactgaa actgaacgtg taagaaagct agccaagtca atcagaaaga      1260
     acaacgaagc taaacaatca ttgttaaaat tgaattatca ttccaagtcc aatgtcaaga      1320
     aattagttaa ctcaagtggt aataacacta caggaaacag tagtaatagc aaatccagta      1380
     gtgggagtaa tggccgatct aacaacttca atggatcacc aagtaatgtt gcatcaggta      1440
     gcaacaatac caagtctgca aacggtacca acaaccgttt tcagaagaac aagaagtaaa      1500
     cttaccagta ggtggacgtt tgttccacca caaacaagtt tggaaagaat tgggtcttcc      1560
     aaacttttgt caagaggtcg taaatggatt aaaagtccat ctgcttccaa acttcaagcc      1620
     gatgctaaac ccgattccga tttcaattcc agagggtccg aaatcagatt gcatcacaaa      1680
     ggaagtacaa gacttgttat tagacgatgc catcgaacaa gtacttccaa accattattc      1740
     aaagcgcgtt ttttactcca acgtgtttac ggttccaaaa cctggaacga atctacatcg      1800
     tccagttctc gatctaaaaa gattaaacac ttacatcaac aaccaatcat tcaagatgga      1860
     aggaatcaag aatctaccat caatggtcaa acaaggttat tacatggtaa aactcgatat      1920
     caagaaagcc tatctccacg ttttagtaga tccgcaatac agagacttat tccgcttcgt      1980
     gtggaaaggt tcgcactacc gttggaaaac aatgccgttc gggttatcga cagctcctcg      2040
     tatctttaca atgttgttaa gacctgtact tcgaatgttg agagatatca acgtatccgt      2100
     catcgcatac ttggacgatc tattaatcgt cggttcaaca aaagaagaat gtttatccaa      2160
     cctcaaaaag acaatggact tacttgtcaa actaggtttc aagttaaatc tagaaaagag      2220
     tgttctcgaa ccaactcaat caattacttt tctcggatta caaatcgatt cggtatcaat      2280
     gaagcttctt gttcccaaag aaaagaagaa aagtgtaatc aaggaaataa gaaacttttt      2340
     aaaactagat tgttgctccc caagaaaact tgctggttta aaaggaaagt taatcgcact      2400
     gaaagatgca gtcatcccat tcagacttta cactcgtcga acaaacaact ttcactctca      2460
     gtgtctgact ctagccaatg gagattggga tcaatcgttc cccattcctc aagatgtcaa      2520
     gtcagagatt tcacattggt taatagttct aaaccaatgg aatggaaaag aaatcagtct      2580
     gtttccaagt tacgactatg ttcttacaac cgatgcctcg gaatcaggtg caggtgccac      2640
     tctcaagaaa ggaaacaagg taatcaaaac ttggtcattc cagtggtcaa caactcaatc      2700
     aaacatgtcg tcaaatcgtc gagaaatgct cgctctgcta atggcctatc aagcgctatg      2760
     tcggaaactg aacagctgca agctgaagat tcaaaccgac aacactacca ctctctctta      2820
     catcaatcgc caaggtggtc aaatacaaga tctctcagtt ctattcgaac aactttggaa      2880
     acaatgcctc aagaagaaag tgaacttgat tggagagcat attccaggat tcttcaatgt      2940
     aaaagccgac cacctcagcc gtctttcaga gatgaatcac aaatcatcga ccagagtaat      3000
     caagagttac aactggcaac tgaagaagga agtgttcaat cgcatacaac ttcaattcgg      3060
     tcaaatacag atggatctgt tcgcatctca cctcaaccat caaacgacca actactcaac      3120
     aatcagaatg aatacactcc acctcgattg gagtcaatgg aagcaatgtc tggccttccc      3180
     accacccatt cttttgcctt ctatcctgga gaagatgaac tcatccagtt cgaagaaggt      3240
     ttctataata ctgatcttcc caatctggag atcagcaact tggtatccga tgattcaagc      3300
     tcaagttcct cgtcatcatc gtcacatgtt tcctcaagta ctgggaacat tccaagaagt      3360
     attgaccaaa caatcagtag agtcgatacc aatccagatt caacaacgtt ggaaactggg      3420
     gattattcaa ctttccaatc tcatgtaatg tcattcgctc gtacaacaaa tacaaagaca      3480
     gctgagctgt taatgaagtc atgggaacct tcaactctca aagtatatag ctccagttat      3540
     acaagattcc gcaatttctg tactttgaac tctttgaatc cagcaaacat taccttagtt      3600
     gttttcatgg attatcttac acatctgttc aagcacaaac ctccgttagc cttctcaaca      3660
     attaacggtc atcgctctat gttgaatcag ttgttactcc ttaggaatca aactgatatt      3720
     gttaatgatc cattcatcac aagaattatg actggtattc acaagttgcg tccttcatct      3780
     gcaaagtata aagagatatg ggatgcaaac caagtattca agcacttatc tactatcaaa      3840
     gtcatcccta agtacacata cactgcgcta ttaaacaaga cacttgtact ctgtaaaatg      3900
     tttggtttag caagatcatc agacttggtg aagtggtcgt tcaaaggtct cattattact      3960
     cctgactcaa tcaaaggtcc agttatcaat gctaaagaac aaagaagtgg tgttgtttca      4020
     atattagaat taacatcgtt agatgataca aactctcaag tatgccctgt tcgccacctt      4080
     gcaacatacc ttagagcctc taaaggaaga agaaagcccc attcgggtga ctctgtcttt      4140
     attaagaatg aggtgaaccg ctccaagtta atgatattaa ctcaaattgt actatcaacg      4200
     ctctcaaagt caggcattga tattgtcaag ttcaaatctc actctacccg ttccgctatg      4260
     gcttctctgc tggtgtccaa taacgttccg ttccacgttg tcaagaagat gggtcgttgg      4320
     aaatcaaacg atactgtaga taccttctac gataaaagaa tcattggtga aaaatctggt      4380
     ggtttcttaa atactgtcgt ccaaatttca taatatatat atatatatga taatataaat      4440
     taaaaattta atttattaaa ttatatttta tattaaatat atatatatat attagtccca      4500
     tcccacccgc ccttagtcgg aattcataaa tcaaattgtt ttagttttta gtgccactat      4560
     ttatacgttt ttattttctt aaaaatttcg caaaactcaa aaaaataaga gttttcgacc      4620
     cttcacaaat ttgtgcatag tgtcgtcggt tcggaatttt tcagtttttc gaccttgcgc      4680
     aattatcgcc gttcattgtg ccggttcgaa atttttactt ttctttcgaa aattttttat      4740
     tcttcgaatg ttctagaaca ttctaaaaaa ttatcttaaa tatttgggaa attcaaataa      4800
     ataaatgtta ttcataatat atatatatat atttaatata aaatataatt taataaatta      4860
     aatttttaat ttaaaactag attgttgctc cccaaggaag cttgctggtt taaaaggaaa      4920
     gctaatcgca ctgaaagatg cagtcatccc attcagactt tacactcgtc gaacaaacaa      4980
     gtttcactct cagtgtctga ctctagccaa aggagattgg gatcaatcat tccccattcc      5040
     ccaagaggtc aaatcagaga tttcgcattg gttaacagct ctaaaccaat ggaatggaaa      5100
     agaaatcagt ctgtttccaa gttacgacta tgttcttaca acgatgcctc ggaatcaggt      5160
     gcaggtgcca ctctcaagaa aggaaacaag gtaatcaaaa cttggtcatt ccaatggtca      5220
     acaactcaat caaacatgtc gtcaaatcgt cgagaaatct ccgctgctaa tggcctatca      5280
     agcgctatgt cggaaactga acaactgcaa gctgaagatt caaaccgaca acactaccac      5340
     tctctcttac atcaatcgcc agggtggtca aatacaagat ctctcagttc tattcgaaca      5400
     actttggaaa caatgcctca agaagaaagt gaacttgatt ggagagcata ttccaggatt      5460
     cttaaatgta aaagccgacc acctcagccg tctttcagag atgaatcaca aatcatcgac      5520
     cagagtaatc aagagttaca actggcaact gaagaaagca agtgttcaat cgcatccaac      5580
     ttcaattcgg tcaaatacag atggatctgt tcgcatctca cctcaaacat caaacgaaca      5640
     actactcaac aatcagaatg aatgcactcc acctcgattg gagtcaatgg aagcaatgtc      5700
     tggcctttca caccaatctt ttgccttcta tcctggagaa gatgaactca tccagttcga      5760
     agaaggtttc tataatactg atcttcccaa tctggagatc aggcaacttg gtatctgatg      5820
     attcaagcac aagttcctcg gttatcatcg tcacattttt cctcaaggta ctggaacatt      5880
     ccaaggaagg tattgaccaa acaatcagta gagtcgatac caatccagat tcaacaacgt      5940
     tggaagctgg ggattattca actttccaat ctcatgtaat gtcattcgct cgtacaacaa      6000
     ataaaaaaac agctgagcta ttaatgaagt cttgggaacc ttcaactccc aaagtatata      6060
     gctccagtta tacaagattc cgcaatttct gtactttgaa ctctttgaat ccagcaaaca      6120
     ttaccttagt tgttttcatg gattatctta cacatctgtt caagcacaaa cctccgttag      6180
     ccttctcaac aactaacagt catcgctcta tgttgaatca gttgttactc ctcaggaatc      6240
     aaactgatat tgttaattga tccattcatc acaagaatta tgactggtat tcacaagttg      6300
     cgtccttcat cagcaaagta taaagagata tgggatgcaa atcaagtatt caagcactta      6360
     tctactatca aagtcatccc caagtacaca tacactgcgc tattaaacaa gacacttgta      6420
     ctctgtaaaa tgtttgttta gcaagatcat cagacttggt gaagtggtcg ttcaaaggta      6480
     tcattattac tcctgactca atcaaaggtc cagttattaa tgctaaagaa caaagaagtg      6540
     gtgttgtttc aatcttagaa ttaacatctt tagatgatac aaactctcaa gtatgccctg      6600
     ttcgccacct tggcaacata ccttagagcc tcaaaaggaa gaagaaagcc attcgggtga      6660
     ctctgtcttt attaagaatg agggtgaacc gctccaagtt aatgatatta attcaattgt      6720
     actatcaaca ctctcaaagt caggtattga tattgtcaag ttcaaatctc actctacccg      6780
     ttcgctatgg cttctctgct gttgtccaat aaagtttcgt tccacgttgt caaaaagatg      6840
     ggtcgttgga aatcaaatga tactgtagat accttctacg ataaaataat cattggtgaa      6900
     aatctggtgg tttcttaaat actgtcgtcc aaatttcata atatatatat atatatgata      6960
     atataaatta aaaatttaat ttattaaatt atattttata ttaaatatat atatatatat      7020
     tagtcccatc ccacccgccc ttagtcggaa ttc                                   7053
//
ID   TEC2B     repbase; DNA; INV; 705 BP.
CC   TEC2B DNA
XX
AC   M73024;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Euplotes crassus transposon like element Tec2-2, inverted repeat
DE   region.
XX
KW   transposon-like element; EUPTLED; TEC2B.
XX
OS   Euplotes crassus
CC   Euplotes crassus DNA.
OC   Eukaryota; Alveolata; Ciliophora; hypotrichs; Euplotida; Euplotes.
XX
RN   [1]
RP   1-705
RC   [1]  (bases 1 to 705)
RA   Krikau M.F., Jahn C.L.;
RT   "Tec2, a second transposon-like element demonstrating
RT   developmentally programmed excision Euplotes crassus";
RL   Mol. Cell. Biol. 11, 4751-4769 (1991)
RX   MEDLINE; 91342679.
XX
DR   GENBANK; M73024; 110.0.
CC   Positions       1     705  Accession No M73024       GenBank (rel. 110.0)
XX
SQ   Sequence 705 BP; 235 A; 146 C; 89 G; 235 T; 0 other;
     tagagggata ataatattga aacaaattaa ttaataatta taattataaa tattgaaaaa        60
     attatttcca aactatcctt tctaacttac cctcttccac tcctaactat tctctattac       120
     caaatgtgat gatattaact ataatcatgt ctaatagctg attaacttca actatgtttc       180
     aaacattaaa tacccttcta aatacctaaa ttctacccaa actataagga aatatcacat       240
     ttagactata aattcttcac tggttcgcct gcggcttgtt aatttactct caccccagac       300
     cccctacagt agcgtagtaa aggcccacca acttcatttt agaggcttta gtatcctctg       360
     aatatggcct tagatcctat gtctaacacc tacattggat acaaggcaaa gtatatggca       420
     ttctgaggac ttatagtaaa tttcgatttt aatcttaaat ttaataatta atctaaatta       480
     gactacttta aaatagggag atttgcctat tttcaactca tcataactac taaggcagaa       540
     ctaactagga gctgtcagtt gcagaatggt cttgcccttg ccaacttaac agactgacac       600
     cattagacat cttgtcctct ggcaatcttt gaattattag atcatatggc cgagtcctca       660
     gtggactctc ccttttcaat tcaaacagtg aaattctagc taatt                       705
//
ID   TBE2      repbase; DNA; INV; 230 BP.
CC   TBE2 DNA
XX
AC   U85403;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Oxytricha fallax transposon TBE2.
XX
KW   OFU85403; TBE2.
XX
OS   Oxytricha fallax
CC   Oxytricha fallax.
OC   Eukaryota; Alveolata; Ciliophora; hypotrichs; Stichotrichida;
OC   Oxytrichidae; Oxytricha.
XX
RN   [1]
RP   1-230
RC   [1]  (bases 1 to 4801)
RA   Herrick G., Cartinhour S., Dawson D., Ang D., Sheets R., Lee A.,
RA   Williams K.;
RT   "Mobile elements bounded by C4A4 telomeric repeats in Oxytricha
RT   fallax";
RL   Cell 43 (3 Pt 2), 759-768 (1985)
RX   MEDLINE; 86079559.
XX
RN   [2]
RP   1-230
RC   [2]  (bases 1 to 4801)
RA   Williams K., Doak T.G., Herrick G.;
RT   "Developmental precise excision of Oxytricha trifallax
RT   telomere-bearing elements and formation of circles closed by a copy
RT   of the flanking target duplication";
RL   EMBO J. 12 (12), 4593-4601 (1993)
RX   MEDLINE; 94038943.
XX
RN   [3]
RP   1-230
RC   [3]  (bases 1 to 4801)
RA   Doak T.G., Witherspoon D.J., Doerder F.P. Dr, Williams K.,
RA   Herrick G.Dr.;
RT   "Conserved features of ciliate TBE1 transposons";
RL   Unpublished (1997)
XX
RN   [4]
RP   1-230
RC   [4]  (bases 1 to 4801)
RA   Doak T.G., Witherspoon D.J., Doerder F.P., Williams K.,
RA   Herrick G.;
RT   "Direct Submission";
RL   Submitted (14-JAN-1997) Oncological Sciences, University of Utah,
RL   Rm5C334 School of Medicine, 50 N Medical Drive, Salt Lake City, UT
RL   84132, USA
XX
DR   GENBANK; U85403; 110.0.
CC   Positions      94     323  Accession No U85403       GenBank (rel. 110.0)
XX
SQ   Sequence 230 BP; 70 A; 28 C; 42 G; 90 T; 0 other;
     caaaacccca aaacccctac agtagtttga ttgagttttt gattgatgaa agtagactat        60
     tttcgcatgc tttattaggg ttttaatagg gttatgtagg ggtttaatgt ttaaatatta       120
     gtaatttaag tgagtataac aagcgagttt ttaaaatatt tcacacaaac ataagcttag       180
     agtcatgtgg cagttctctg aattttatct tccttagttt atgtttgatt                  230
//
ID   TBE1      repbase; DNA; INV; 4076 BP.
CC   TBE1 DNA
XX
AC   U85403;
XX
DT   27-JUL-1999 (Rel. 3.5, Created)
DT   27-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Oxytricha fallax transposon TBE1 fal4 insert in a TBE2 element, in
DE   micronuclear clone 123K1.
XX
KW   OFU85403; TBE1.
XX
OS   Oxytricha fallax
CC   Oxytricha fallax.
OC   Eukaryota; Alveolata; Ciliophora; hypotrichs; Stichotrichida;
OC   Oxytrichidae; Oxytricha.
XX
RN   [1]
RP   1-4076
RC   [1]  (bases 1 to 4801)
RA   Herrick G., Cartinhour S., Dawson D., Ang D., Sheets R., Lee A.,
RA   Williams K.;
RT   "Mobile elements bounded by C4A4 telomeric repeats in Oxytricha
RT   fallax";
RL   Cell 43 (3 Pt 2), 759-768 (1985)
RX   MEDLINE; 86079559.
XX
RN   [2]
RP   1-4076
RC   [2]  (bases 1 to 4801)
RA   Williams K., Doak T.G., Herrick G.;
RT   "Developmental precise excision of Oxytricha trifallax
RT   telomere-bearing elements and formation of circles closed by a copy
RT   of the flanking target duplication";
RL   EMBO J. 12 (12), 4593-4601 (1993)
RX   MEDLINE; 94038943.
XX
RN   [3]
RP   1-4076
RC   [3]  (bases 1 to 4801)
RA   Doak T.G., Witherspoon D.J., Doerder F.P. Dr, Williams K.,
RA   Herrick G.Dr.;
RT   "Conserved features of ciliate TBE1 transposons";
RL   Unpublished (1997)
XX
RN   [4]
RP   1-4076
RC   [4]  (bases 1 to 4801)
RA   Doak T.G., Witherspoon D.J., Doerder F.P., Williams K.,
RA   Herrick G.;
RT   "Direct Submission";
RL   Submitted (14-JAN-1997) Oncological Sciences, University of Utah,
RL   Rm5C334 School of Medicine, 50 N Medical Drive, Salt Lake City, UT
RL   84132, USA
XX
DR   GENBANK; U85403; 110.0.
CC   Positions     324    4399  Accession No U85403       GenBank (rel. 110.0)
XX
SQ   Sequence 4076 BP; 1255 A; 746 C; 701 G; 1374 T; 0 other;
     caaaacccca aaacccctta atgagatgtt ttagtgtatt gatttgtagg gaatttgtta        60
     ggggttgggg ttattaatag gttttaatgt gaaatttaaa gtatatgtat ttaatttaat       120
     cactcaaaat gcacttttgg atcgtgtggg agaggcctga agtttatctt acttaaccac       180
     aactctatct gttctattga tatgtctgat cttgagtttg gttttattat tatttactct       240
     gccatttgtt tcattgattg agagactctc gttttgtcaa taaattgctt aattctttgt       300
     tttgcgtcct tctcgcacct tgtagagtag tattcgttgc gaggcatatc gcactctatt       360
     attattgctg ccatagccca cacatcccat tgaaagtctc catctctcca gtcttctctc       420
     tctggataat agccgtgagt ccccataaca gttccaagcc tagatacctc cactcttaag       480
     gctctgttga aatcgataat tgctactctt acaggtgaaa agttcaacat tatattctca       540
     ggcttgagat ccctgtgaac aaagcctagc ttgtgaagct ctttgatacc ctgtatagtt       600
     tatgttgcta ttaatgcaag ctatttatga tttctttact cagttatgaa atctctgagt       660
     gtcatttcat atagtgggag tctgaaagct acatgatctt tggctaggag aacagcatct       720
     agctttatta agtatttgca ctctttaaac ttagactgag tgagtactta atattcatta       780
     gtaaactcca tttaatactt atcatcacta aggagatagt tgaatgggta tactttgtaa       840
     gcatactgat gatcctatat aactttcttg tcataggagt cctctaggat taggtagctt       900
     tagagagaag tatctaaatc aatctatgca agcactggaa ttttcttgta ttatatttta       960
     atcatgattt tagtgacctc tgatgccaag aggttgcgtg caatcctcac gtactctgtt      1020
     tcacttgctt gttaaacgtc cgcaacttag agaggctccc ttgcttttct tttgttgagc      1080
     agctttagtt gagtgtctta atcttcaatt tctatttctt tcttgtgggc ttttaataga      1140
     tgcttcttta agtctcttgt atgagagtac tacttatggc actcaaagca atcatacttt      1200
     ccatcaactt tgtcatgctt taagtataca gtaggcttcg cttccttatg caccttcata      1260
     tgcctgtacc agctagattt atgagtgaag tctctctcac acttctcaca aaaatatact      1320
     tcaacctcct ctgcttacat tgaaacttca tttctaactt tctcctcctc tctgtctccg      1380
     acacacttgt ttaccattaa ttttctatta ttaatttcta tttaaataac agagacctca      1440
     agtgatagct ctggctgttc tttaagtgag ttcatctcac agctatcaca ctttttattg      1500
     ctgccaaagg ttagtctcat ttagtttgat ggaagtgctg ttgtttttct taaaatgtta      1560
     gcgctcatat ttaaatttga atttaaaatt ataaaactgc ctctataact gagagcttat      1620
     atgagagctt tgcaaggcta caagcttcaa tggaagttct tagagtatta gagaagaatt      1680
     atgagtgtta agagacgatc cagctctaaa tatgggtgag gaagtaacca tttttacttt      1740
     caataataag ttgattatag tacgtaccga tttaggaggt gcacctaatt aagtacgtac      1800
     tgctttagga ggtattttgt gattttatga ttaaaattag ggtgctccta attaagtact      1860
     agctttaatt aatgctccta attaagtact agcattttag gagctgctcc taattaagta      1920
     cgtaccaatt taaatttaaa aatatggaac tataacagaa gaaattgata tcaatctctc      1980
     aaatttgaaa ccagttctca aaaccttctc catatccttc ttagaggttg acctcctata      2040
     ggatgcccat atttaatagc aagttttaca gaggtatata attgaaatca ataaacttaa      2100
     atttgaatat catttcttag atctgaaaac aagatggagt caatgaatga tgtaatgaaa      2160
     agagtgcaag cacaagaatt gattcaaaga tttagaagta aggaggattt gcaccgctac      2220
     ctggtacagc aaggtaagga actcatagta actaaactta attatgtagt tggcttgttc      2280
     ctgccaacaa tggaaggtac taaaatttca tttctaagag caatactctg tgaagagaag      2340
     aaagcattga aaacttagga tgtaaagttt gcagagattc ctaactatcc agaaatctca      2400
     gtgactaacc tatatgacga cgctattaat gacccagagg tttcgcagta cctgcctact      2460
     aagaagcagt tgtcaaacaa actacctgag agaaactatt tctttggtat acttgcaaca      2520
     atcaaaggtg attacttgaa agagattatt caagaatctc ataagaagag gtacagcatc      2580
     tctccagaag acaagagcaa acaaggcatc aagataagtg agagctggct atctgaactg      2640
     cagaagcacc cttatatatc aagtaagatt tatagtttaa ctctttagaa aaatcgggta      2700
     ctggcatctt cttgatgaag gagcagagca agcttcacag agagcgaaag tcgcagacaa      2760
     aatatgaagt cagcaagaga ctatattcaa atatttagcc tccagaggaa atgaacatag      2820
     atgctggagc tggcagtaag aggaggaacc taggaggagg gaagtagatg gaggaagaaa      2880
     agaaagagaa gccagctcct actaaagaat tctaaatgtg acttatatat tcattaactt      2940
     aactctaaaa cttatttata aacattcact ctcccttctt tggcacactt ttaagccaac      3000
     taattatcta ctctcttcgc tgaacttttt ataaagtcaa ctgtatcgat tggtaggtca      3060
     tgcatcaagt ggtagagcag caatttctta taatgacctt ttaatatacc ccagtagaat      3120
     tcaattccat taaactatgg gctgtaaggc acgttgaaca ctggcgttat gcttagttgt      3180
     tcataactct tccttgtttc tttcgtctta tgaacagaaa ggttatctac gaatagtata      3240
     atctcttatt cagggtactt ctctctcagt tgctctaaga acttaatata ctgctctgtc      3300
     tttatagagc gaggatgaat aacatatgtt tctaaaccag catcctcgct aatacctccc      3360
     agaattgcca ttgtttatac cttgactttc tagtcatata cctctatatt actattcctc      3420
     ttataccaag acttctatat gaaagtattg aaggtgaaca cagcctcgtc agcatgtata      3480
     aacttaatat tattctatta cgctctctgc atttaatcat aaatataatt taaattgttt      3540
     ctgtaaaatg gctgagtgaa atcaatcact ctcttgatac gattcacacc tttgtaagta      3600
     ataccatttc gtttataaat gttagcaaca gattatgcag atatcttcaa ctctgggaac      3660
     tggcggtgaa acatagtagc tcgttggtcg agagagaagt gagcccaata cttcaaagtt      3720
     ttttcattga taagatagtc aatatgcttt tataagaact ttgacttcct cttaggctta      3780
     gaattcagct attattgctt taattataca gctataagac agtgggaacg aactgttgac      3840
     ggacttcgct ttaagagcag agcaatagac ttatagttca gtactggttt gacttagtca      3900
     ctatatacat cacatccata gcgcaattta aacactaaat ctatatactc ttcatcataa      3960
     atagacccca atagcttgta attcttgtct cgcatttaat taataacccc aacccctaac      4020
     aaattcccta caaatcaata cactaaaaca tctcattaag gggttttggg gttttg          4076
//
ID   SIRE      repbase; DNA; INV; 316 BP.
CC   SIRE DNA
XX
AC   ;
XX
DT   29-JUL-1999 (Rel. 3.5, Created)
DT   29-JUL-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   SIRE repetitive element (a consensus).
XX
KW   SIRE; repetitive  element.
XX
OS   Trypanosoma cruzi (consensus)
CC   consensus
OC   Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae;
OC   Trypanosoma; Schizotrypanum.
XX
RN   [1]
RP   1-316
RC   [1]
RA   Puerta C., Martin J., Alonso C., Lopez M.C.;
RT   "Isolation and characterization of the gene encoding histone H2A
RT   from Trypanosoma cruzi";
RL   Mol. Biochem. Parasitol. 64 (1), 1-10 (1994)
RX   MEDLINE; 94359525.
XX
RN   [2]
RP   1-316
RC   [2]  (bases 1 to 316)
RA   Jurka J.
RT   ;
RL   Direct submission (July 1999)
XX
CC   Putative retroelement. 
XX
CC   [2] (Consensus)
XX
SQ   Sequence 316 BP; 90 A; 63 C; 62 G; 99 T; 2 other;
     aagaaaacat tgaagcaatt aactaacgaa cctttttycc taacttgttt ggtttccata        60
     gataatttca ggatccggcc agctgcccgg aagattattc taggagcttg tgaaaagaat       120
     gatcgcggga gagctggcta acttaattaa tgtatgtgta tatcctgata aatgaatgca       180
     ttctttatga tacttttcta ccgtatgaat cttttgggaa gaacgcgact ttgtaggggc       240
     agggarccga tagaggccag ataatatttt atttttattt tgccatccca cccaccccct       300
     tttgattccc accaca                                                       316
//
ID   BACSAT    repbase; DNA; INV; 316 BP.
CC   BACSAT DNA
XX
AC   ;
XX
DT   02-AUG-1999 (Rel. 3.5, Created)
DT   02-AUG-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Bacillus satellite DNA (a consensus).
XX
KW   BACSAT.
XX
OS   Bacillus lynceorum (consensus)
CC   consensus
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Orthopteroidea; Phasmatodea; Bacillidae;
OC   Bacillus.
XX
RN   [1]
RP   1-316
RC   [1]  
RA   Mantovani B.;
RT   "Satellite sequence turnover in parthenogenetic systems: the
RT   apomictic triploid hybrid Bacillus lynceorum";
RL   Mol. Biol. Evol. 15 (10), 1288-1297 (1998)
RX   MEDLINE; 99003703.
XX
RN   [2]
RP   1-316
RC   [2] (bases 1 to 316)  
RA   Jurka J.
RT   ;
RL   Direct submission (August, 1999)
XX
CC   [2] (Consensus)
XX
SQ   Sequence 316 BP; 84 A; 39 C; 41 G; 152 T; 0 other;
     agatctgtat ttgttgattt atttcatttc catttgtatc gattcagctt attttggtta        60
     ttttacatta atatgatcaa gtagattcca tttccactca tttcacttat atccttttat       120
     ttatagtgtt ataattcatg catttaaaca ggttaattcg gttctttaaa taacacttat       180
     ttcattataa atgggttatt ttgatgcatt atattgattt ttaacttcat tttatttgtt       240
     ttaacatatt tgggtagaaa tcatttcatt tctattgtaa caagtgtttt tgtttggcga       300
     atcaggtttc cgaatg                                                       316
//
ID   TDD_DD    repbase; DNA; INV; 527 BP.
CC   TDD_DD DNA
XX
AC   K02644;
XX
DT   11-AUG-1999 (Rel. 3.5, Created)
DT   11-AUG-1999 (Rel. 3.5, Last updated, Version 1)
XX
DE   Slime mold (D.discoideum strain Ax-3L) transposons Tdd-3/Tdd-2 3'
DE   junction.
XX
KW   transposon; DDTDD; TDD_DD.
XX
OS   Dictyostelium discoideum
CC   Slime mold (D.discoideum) strain Ax-3L DNA, clone pDdB14.
OC   Eukaryota; Fungi; Myxomycota; Acrasiomycetes; Dictyosteliales;
OC   Dictyosteliaceae.
XX
RN   [1]
RP   1-527
RC   [1]  (bases 1 to 527)
RA   Poole S.J., Firtel R.A.;
RT   "Genomic instability and mobile genetic elements in regions
RT   surrounding two discoidin I genes of Dictyostelium discoideum";
RL   Mol. Cell. Biol. 4, 671-680 (1984)
XX
DR   GENBANK; K02644; 81.0.
CC   Positions       1     527  Accession No K02644        GenBank (rel. 81.0)
XX
SQ   Sequence 527 BP; 276 A; 81 C; 35 G; 134 T; 1 other;
     tctagaatac atcaaaaaag caaaagatct gaaaanctta tcagcaaaag accataataa        60
     cttcaaagat cctaagatcc ttctcacttc aacgatcaag ctaagaaaaa caacagctaa       120
     ttactattgt attccagaat catctctccc aaatattata tcttttgatc aattcatatg       180
     attaaaataa cccttcagct taaatgataa gcctttaaat aaatattaaa taaaactcgt       240
     attaacacag atggacatat atcaatcttg ttaatccaat attaaaaaaa aaaaaaaaaa       300
     agaaaaacat atccatcatc aatctaacat caactacatt caatctatct actctacaca       360
     ctaattcctt caatccttgg attaggaata agaatagatc tgaataaacg agaaagaaaa       420
     aaaaaaaaaa aataaaaata aaaataaaaa atatttttat ataaacacat aattaaaaaa       480
     aaaataataa aaataatata aaaaaaaaaa aaaaaaaaaa aaaaaaa                     527
//
ID   BMC1      repbase; DNA; INV; 5091 BP.
CC   BMC1 DNA
XX
AC   AB018558;
XX
DT   13-AUG-1999 (Rel. 3.6, Created)
DT   13-AUG-1999 (Rel. 3.6, Last updated, Version 1)
XX
DE   Non-LTR retrotransposon BMC1 DNA, complete sequence.
XX
KW   endonuclease and reverse transcriptase-like protein; Gag-like
KW   protein; ORF1 and ORF2; BMC1.
XX
OS   Bombyx mori
CC   Bombyx mori (strain:TW plus P) 5th larval instar female silk gland
CC   DNA, clone_lib:EMBL3 clone:k-1-3.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Lepidoptera; Bombycoidea; Bombycidae; Bombyx.
XX
RN   [1]
RP   1-5091
RC   [1]  (sites)
RA   Abe H., Ohbayashi F., Shimada T., Sugasaki T., Kawai S.,
RA   Oshiki T.;
RT   "A complete full-length non-LTR retrotransposon, BMC1, on the W
RT   chromosome of the silkworm, Bombyx mori";
RL   Genes Genet. Syst. 73, 353-358 (1998)
XX
RN   [2]
RP   1-5091
RC   [2]  (bases 1 to 5091)
RA   Abe H.;
RT   "Direct Submission";
RL   Submitted (11-OCT-1998) to the DDBJ/EMBL/GenBank databases. Hiroaki
RL   Abe, Tokyo University of Agriculture and Technology, Department of
RL   Biological Production, Faculty of Agriculture; 3-5-8 Saiwai-cho,
RL   Fuchu,, Tokyo 183-8509, Japan (E-mail:wfem@cc.tuat.ac.jp,
RL   Tel:+81-42-367-5848, Fax:+81-42-360-8830)
XX
CC   ORF1: 313-1959 (putative DNA-binding domain;
CC   ORF2: 1963-4845 (endonuclease and reverse transcriptase).
XX
DR   GENBANK; AB018558; 112.0.
CC   Positions       1    5091  Accession No AB018558     GenBank (rel. 112.0)
XX
SQ   Sequence 5091 BP; 1182 A; 1604 C; 1166 G; 1139 T; 0 other;
     cattccgatc caagcactcg ccgtgtgctg acgtgctcat tgttcgttcg atcgcccgac        60
     ctcggttcgt ggcacatctg gcgtccaagt gttttctcgg aagttactac ctgtgctaat       120
     tgcgtcgcac cgccgtttgt gaacgggcgg acccctaaat tcctggaatt cgttcggcaa       180
     cttagtggcc cgtttgtaag cggacggttg tgtgccgtaa ttaatcgtga ttattataat       240
     attggggcct cgccgtaagg cgagtgtgtt taaagtcccg gggtagcccc ccctgggcac       300
     gtaatagtta caatggactc cacgatcgat ctgttcgcgg aattcctccg tctgaggtac       360
     ccgacattat cggtcgaatt tttagaattt aaggccaatc acgtcgcgaa ctcagaagcg       420
     gtctccgtcg cgcccgccgc tcccgtgtct ccaatactcg cgagcaaagc tcccgcgtcg       480
     atcgctgcgg tctcggttcc agccctgcac tcatccgcag cacacgtcgc gtccacgcgt       540
     tcatccgcgg cctccgtcgc gcccgcgccg tcctctgccc ccgagcgatt gtccatggcc       600
     tccgtcgcga ccgtcaaccc tgcgccctct aaaacgcccg cctgcgggtc gcccgcaccc       660
     tcctcttcat ccgactcgga gtcgaacatg gaggtcgatc cttcccccgc cccctcgact       720
     gatggattca cagtagtcca aaaaggtaag aggcgcgctg cggaagcccg agctcccgcg       780
     gccgccaaag taagcagagc cacgaacgcg tcgcgcctcc gtccaccgac ccccgttgct       840
     ccccctgccc gtgctacacc gtcgccgcgt ccggtagaac aaaagaaaat ccaaacccct       900
     cccccggtaa tccttcaaga gaaggcagcc tgggaacgag tttccctggc ccttaaggcc       960
     aaaaatatta atttcacgaa tgcccgtaac ctcgcgaacg gcattcaaat taaggttcaa      1020
     acacccgacg accatagggc cctctcttct tacctggagc gtataagttt ccatacgtat      1080
     acgctccagg aggagcgcga acttcgtgcc gtcatacgtg gcatccctaa agagttggat      1140
     gccgaactcg tcaaggccga ccttctggaa caaggcctac cagtaaattc agtgcaccgc      1200
     atgcacaccg gccgcggtag ggagccatat aatatggttc tagtcgccct ccagcctacc      1260
     cccgagggta agcaaatttt taacatacgg accgtctgta gactctccgg tatcgccgtc      1320
     gaagcccccc ataaaaaagg cactcctagc cagtgccata actgtcaact gtacgggcat      1380
     tcttcccgta actgtcacgc gcgcccccga tgcgtcaagt gtttaggcga tcacgctacg      1440
     gccctatgca ctcgcgatca aaaaaccgcg acggaaccgc ctagctgcgt cctgtgtcaa      1500
     acacagggtc accccgcaaa ttaccgcgga tgcccccgag ccccgaaaat aaatcgccgc      1560
     gtcgcccgcc aaaaccgcct ccgagcttct cacccagaca ccaaagcctc ggcaccctct      1620
     gtgtcgcagg ctaagccagc gttcgttccg gcgccggtgc ccagtggttc ggcctgggcg      1680
     aaaccgctgc cgtacacgaa cacggctaca actccctcct ccgcgattcg tcccgccccc      1740
     gcgatacgcc cctcccccgc gaattgccct ccgacagcgt ccgacaatct cgctctagcg      1800
     atcgacttct ttcaatcgat taactttgag cgcgttaacg ctttaggtga cgccatccgc      1860
     gccgcctcca ctgcacagca cttcatcgcc gttgtgcaag aatacgccga cgtatacgcg      1920
     tcgttaaata cgtacgtcct cccctcactc cgccggtaat caatggcgta caaaagtagg      1980
     ctgaaacccc tatccgtaac gataggattt tttaacgcat acggtctcgc aaatcaacgt      2040
     gatcaggttt gtgatttttt gcgtgaccat caaattgaca tatttttagt acaggagact      2100
     ctacttaagc ccgcgcgccg cgaccctaaa atcgcgaact ataacatggt taggaacgac      2160
     aggcgcactg ctcgtggtgg tggtaccgtc atctactaca gaagagcctt gcactgcatc      2220
     ccgctcgatc cccccgcgct cgttaacatc gaagcatcag tatgccgaat ctcactgacg      2280
     ggacacgcgc cgatcgttat cgcgtccgtt tatcttccgc cggaaaagat cgttctaagc      2340
     agtgatatcg aggcgctgct cagcatggga agctctgtca ttctggcggg cgacctaaat      2400
     tgtaaacaca tcaggtggaa ctctcacacc acaaccccta atggcaggcg gctcgacgcg      2460
     ttagtcgatg atctcgcctt cgatatcatc gctccgctaa ccccgactca ctacccgcta      2520
     aatatcgcgc atcgcccgga tatactcgac atagcgttat taaaaaacgt aactctgcgc      2580
     ttacactcga tcgaagtagt ttcagagtta gattcagacc accgtcccgt cgttatgaag      2640
     ctcggtcgct ctcccgattc cgttcccgtc acgaggactg tggtggattg gcacacgctg      2700
     ggcatcagcc tggctgaatc tgatccacca tcgctcccgt ttagcccgga ctctaccccg      2760
     tctcctcagg ataccgctga agccatagac atcctaacgt cacacattac ctcgacatta      2820
     gataggtcat cgaagcaagt tgtagcggag gacttccttc accgcttcaa attgcccgac      2880
     gatattgggg aactccttag agctaagaac gcttcgatcc gcgcctacga taggtatcct      2940
     accgtggaaa atcgtattcg aatgcgtgcc ctacaacgcg gcgtaaagtc tcgcatcgcc      3000
     gaagtccgag atgccagatg gtctgatttc ttagaaggac tcgcgccctc tcaaaggtct      3060
     tactaccgct tagctcgtac tctcaaatcg gatacggttg taactatgcc ccccctcgta      3120
     ggcccctcag gtcgactcgc ggcgtttgat gatgacgaaa aagcagagct gctggccgat      3180
     acattgcaaa cccagtgcac gcccagcatt caatccgcgg accctgttca tgtagaatta      3240
     gtagacagtg aggtagaacg cagagcctcc ttgccaccct cggatgcgtt accacccgtc      3300
     accccaatgg aagttaaaga tctgatcaaa gacctacgtc ctcgcaaggc tcccggttcc      3360
     gacggtatat ctaaccgcgt tattaaactt ctacccatcc agctcatcgt gatgttggca      3420
     tctattttca atgccgctat ggcgaactgt atctttcccg cggtgtggaa agaagcggac      3480
     gttatcggca tacacaaacc cggtaaacca aaaaataatc cgacgagtta ccgcccgatt      3540
     agcctcctca tgtctctggg caaactgtat gagcgtctgc tctacaaacg cctcagagac      3600
     ttcgtctcat caaagggcat tctcatcgat gaacaattcg gattccgtgc aaatcactca      3660
     tgcgtacaac aggtgcaccg cctcacggag cacattcttg taggacttaa ccgaccaaaa      3720
     ccgatctaca cgggagccct cttcttcgac gtcgcaaaag cgttcgacaa agtttggcac      3780
     aacggtttga tttttaaact tttcaacatg ggcgtaccgg acagtctcgt gctcatcata      3840
     cgagacttct tgtctaaccg ctcttttcga tatcgagtag agggaacccg ctcctccccg      3900
     cgaccactca cggctggagt cccgcaaggc tccgttctct ctccgctcct atttagttta      3960
     tttattaacg atattccccg gtcgccgccg acccagctag ccttattcgc tgacgacaca      4020
     accgtttact actcaagtag aaacaagtcc ctaatcgcga gtaagctcca gagtgcagcg      4080
     ttaaccctcg gacagtggtt ccgaaaatgg cgcatagaca tcaacccagc gaaaagcaca      4140
     gcagtgttat ttcaaagggg aaactcaccg cttatttcct cccgcattag gaggagaaat      4200
     atcacacccc cgatcaccct cttcggccta cctatacctt gggctaggaa ggtcaagtac      4260
     ctgggagtca ccctggatgc atccatgaca ttccgcccgc atataaaaac agtccgcgat      4320
     cgtgccgcat ttattctcgg cagactctat cccatgatct gtaagcggag taaaatgtcc      4380
     cttcggaaca aggtgacact ttacaaaact tgcataaggc ccgtcatgac ttacgcgagt      4440
     gtggtgttcg ctcacgcggc ccgcacacac atagacaccc tccaatccct acaatcccgc      4500
     ttttgcaggt tagccgtcgg ggctccgtgg ttcgtgagga acgtcgacct acacgacgac      4560
     ctgggcctcg aatcgatccg caaacacatg aagtcagtgt cggaacgtta cttcgataag      4620
     gctatgcgtc atgataatcg ccttatcgtt gccgccgctg actactcccc gaatcctgat      4680
     cacgcaggag caagtcaccg tcgtcgccct agacacgtcc ttacggatcc atcagatcca      4740
     ataactcttg cattagatac cttcagctct aacactagga gcaggcttag gagccccggt      4800
     aaccgtactc gtcgaactcg acaaagaggt cgacgtgcag cctaacccat gcatcagccc      4860
     gctgagtttc tcgccggatc ttctcagtgg gtcacgattc cgatccggta gtagattcat      4920
     tcgcgaagca actgctcttg agtcgttagg tttccttcgg aggcgctcgg gcagttgtta      4980
     gcaaatccca cccctcttgg ctgagccttt gctcgcccac ctgtcctggt gaagctggaa      5040
     aggcctccgg gccaccagta atatctcaat cataaaaaaa aaaaaaaaaa a               5091
//
ID   TRE3A     repbase; DNA; INV; 5243 BP.
CC   TRE3A DNA
XX
AC   AF134169;
XX
DT   13-AUG-1999 (Rel. 3.6, Created)
DT   13-AUG-1999 (Rel. 3.6, Last updated, Version 1)
XX
DE   non-LTR retrotransposon TRE3-A, complete sequence.
XX
KW   non-LTR retrotransposon; ORF1; ORF2; endonuclease;
KW   reverse transcriptase; TRE3A.
XX
OS   Dictyostelium discoideum
CC   Dictyostelium discoideum.
OC   Eukaryota; Dictyosteliida; Dictyostelium.
XX
RN   [1]
RP   1-5243
RC   [1]  (bases 1 to 5243)
RA   Szafranski K., Gloeckner G., Dingermann T., Noegel A.A.,
RA   Eichinger L., Rosenthal A., Winckler T.;
RT   "Non-LTR retrotransposons with unique integration preference
RT   downstream of Dictyostelium discoideum transfer RNA genes";
RL   Unpublished
XX
RN   [2]
RP   1-5243
RC   [2]  (bases 1 to 5243)
RA   Szafranski K.;
RT   "Direct Submission";
RL   Submitted (10-MAR-1999) Abt. Genomanalyse, Institut fuer Molekulare
RL   Biotechnologie, Beutenbergstrasse 11, D-07745 Jena 07745, Germany
XX
CC   TRE3A is related to the previously reported DRE non-LTR retrotransposon.
CC   ORF1: 170-1423; ORF2: 1423-5127.
XX
DR   GENBANK; AF134169; 112.0.
CC   Positions       1    5243  Accession No AF134169     GenBank (rel. 112.0)
XX
SQ   Sequence 5243 BP; 2204 A; 1273 C; 671 G; 1095 T; 0 other;
     aaaaaccgta ccgcgatcaa gaggatacaa gatacacgtg aaaagtaatt catccttttc        60
     tatccttaat ctcggtcaat tttaaccaat ctttcaaaaa aaatcaccaa tccaccacga       120
     tctacagatc taacttacca aatcgccgat tcaaaggaat cccatcgaga tgaattccta       180
     cgcagacgcg gctaaaatgg ccaacccctc cacccatatg gacgaggcat cagagaactt       240
     cattaaggaa ttctccacaa aaacagcaga gataaaggag acctacccca aattatcaat       300
     aggcctcaaa gacatctcca aatactgcga gaccatattg aacatgactg ctctctcaac       360
     ctacgagaaa aacaacggat tctacccaat tacactcgaa ttccccaaaa tggatctcat       420
     ggggttagaa gaaatgagaa aaacactctc aaactacgat atcccaatcg acaagatata       480
     cataggcaaa ggaactagaa aaacgatcca cctgatgatt aaaaacgaac aatctctcct       540
     aaatatcatt agagatagaa gcaaattggg aaccttcatc acctccagta gagactacca       600
     cgtcctcaca ggaagagtaa gaattccaag agaaaaggca ggaatagtgg acgccctcat       660
     caaaactgcc tttgcagaag aaatacccta tgcaatatac catactatat actccaccga       720
     ccacctccta gtattcggtc taatagaatg caaaataggc gatcaaatga aatctggcca       780
     acacaataca gaaatcgcca actttaccat cagaacggcc accaaaacct actcctcaca       840
     aaagaaaaat aagaaagtag agtcaaacaa cacggaagaa ccattagaag atgagatgac       900
     agatgatcct cccaacatcc aaaacaggat agcaatcaaa tcctctcaac caaaaccaca       960
     acaacaaaca aacaacccag caaacaataa gtctgataaa caatcaaccc aagagaaaaa      1020
     agcccaatca aaaaagtcct ctcaacctct tccccccaaa aaccaagcag aatctcaatc      1080
     tgtcaaaccc accacaacca ctaccacaac atccaacgcc atccaaaaag acaatgccaa      1140
     caaaacgagc actaacatcc attcatcctc ggaaaacaga gagaagacac caaacatccc      1200
     tccatcacat aaacgcaaga acgaggaaat ccactcaaac aacgaggtca cccaactctc      1260
     accaacaata aacagaagca acccttacat cccatccacc cctaagacac ctgtcaaaaa      1320
     agaaaggaaa ggaatcattg agagcttcat agagagtatc tacccttcac catccaaacc      1380
     gcagctatac gactcccaag aggagatcga tatcatctca taatggtagt aatcaaaatc      1440
     aaccaatgga atgtcagagg ttggggcact gacacctcct tcaaaaacaa aacagacttt      1500
     atcaaatccc aatccccccc aaactcattg gcactaacca tagtcaatga actcaacgcc      1560
     gacgcaacac aagcacacca gctattccct ggctccatca ttagcgcaac caacagaggc      1620
     aacggaatag gaatactaaa ccacaacaac caaaacataa aactctcacc aatattcata      1680
     atagaaggta gactaataat atcagacatt ctaataaaag ataccacaac gagaatcttg      1740
     gccatatacg ccccggccca acctgataaa agaaaaacac tagcttcaac actaaacaaa      1800
     cacttcaaca accaatacca caacctaacg tctaacccta aaaaaaacat cgacatcata      1860
     gcaggtgact tcaattgttt agacttcaat gacaatcaca catcaaatga cgaccaaggc      1920
     aacttgacaa cacaatcccc agatgagatg gccacagtaa tcgaagccat cagaatttca      1980
     aataacctaa tggatatgga ccaactaaat aaaagaccca ccttctcaag aacgatacac      2040
     aacacaaaca ataacctcac aagaatcttg gaaaggagac tagacagaat ataccttaac      2100
     aatagcataa tcaactacag ccaattatac ttaaggaacc taatcccccc aaaaattaac      2160
     gacatacctc tatcagatca caacttccta tcaaccacct tcactctacc caacatacag      2220
     atgaacaagc gcagatggag attaaaaaaa tcctcaatcc tctcaagcat aatgcttaag      2280
     aaaatagact tcctacttaa cgattattca agggagctgt catccaacca taactctatt      2340
     tccttctctc aactcaacag cttactaaac aaaataaaac aactatacac agaatttcaa      2400
     aaacaaaatg actacaacaa taaggcaaac atcaaaaatc taatctccct actagagaca      2460
     gaatttaaag accaagcctt cgcaaccctt tcagcaataa atgaatctaa aaaaagagaa      2520
     gaacaactta aacaagaatt gaacaactat tgcgaagaaa cctcactcaa gtacatctcc      2580
     gcgagaatca agaaaagaca caatgatttc accatcaacg cagtaaaaga tgcacaaggt      2640
     agaacaatca acaaacagga attgatcgaa gaagaatacg taaaatatta ctcaaatctt      2700
     tatgactaca aagaagatga cccaccatct cattatgaaa tgttggaaaa ttggacagtg      2760
     accagggact caacatggga caaccttgaa aatgaattca catcacaaga gatcctagaa      2820
     gtaataaaac aattgaaccc acacaaatct ccaggcccag atggaattcc aaacttattc      2880
     tacataacac acaaagaaaa actagctcca atactggcct cagcattcaa cgacactcta      2940
     agaaatcctc atctaattag caaaaattac aaagaaggcc tcattatcac gatacctaaa      3000
     aagggagacc ccgaactaat caaaaacaga agaccaatta cactggctaa ctgtatatat      3060
     aaaatccact caaaactaat aaacaataga ataatcccaa tactaacgaa agtgatcaac      3120
     cacaatcaaa aaggtttcgt accaggcaga ttcattatag ataatatcat atcaatgaac      3180
     gaattaatca actattgtaa tgataaaaga attaacggaa taattacact atatgatttc      3240
     gaaaaagctt ttgactcgat ctcacacggt tcaatactca gatcactaca acacatcaac      3300
     attccaacca atataatcaa cctgataatg aatctactca ccaaatctga agcaagaatt      3360
     gaaattaatg gtagaactac tatacccttt gagatcaaaa gaggagttaa acaaggagat      3420
     ccactatcac ccaccctgtt cgtccttgta atagaggctt tagctagaaa aattttacaa      3480
     gatgaccgaa ttactggcct tcctctaaac aacagcaacc acagagagaa attccaaagc      3540
     tttgcagacg actcggcttc aatggtccca gactctcaac aacttgaatt agtactacaa      3600
     cacttcaatt cattttgcaa agccacttcc tcaaaactaa acatcgacaa atcttcatca      3660
     attcttatag gcaacccaga caataccaac caaagaattc caatatctac aaatccagaa      3720
     agatacttgg gatacttctt cacaggcaaa gggataacaa gaaaaatgcc agaaatatta      3780
     aacacaataa gatcatcctt agtactatgg aaaaccactg actcaacaat caaaaccaaa      3840
     accaacatcc tcaaagcatt cgcactctct aaattaacct actattcata tgtagagaac      3900
     tttaaggaag aggaattaaa ccaaatcaat aaattagtcg aatggttttt atcggcacca      3960
     aacaacaaaa atgctagtgg atttcaagtt attaatttaa tgagaaccaa aagagcaaga      4020
     tacccactaa aagtaggggg ctggaacatt tggaatatag aattgagaca actggcgcag      4080
     aaactttgga tcataaacca gttcatccta gcactagaaa ccaaacaaac aaactcatct      4140
     catcacaaaa gctgggaata tcagatccaa aaaaacaaat tcacatccag atacctaaaa      4200
     gaaaacttag acgaatggaa caaaataaga ataaaaaaag caatcttcaa caataatctc      4260
     acatccataa aaaacgaaaa tggacaacca ctttcactgg cagaatggta taccacaatt      4320
     caagaccaaa atccaaccat ccctaaaacg gaattccaat catctctaaa cttaagaggc      4380
     tacagctata atcaactctt caacaacata ctgaagataa aagaccctaa aacaagagac      4440
     acaatgttta gattccatgc cagatgcctt ccaataaact accttcacaa caaacaatgc      4500
     ccactctgca aagaagatat gagcaaagac ccatacggtc acctgttctt ctcatgcaag      4560
     aaaacaaaac aattcataaa aataaataaa ctcaaaaatt tcatctatat taccacaggc      4620
     aaaggtaaaa actggcacca tacaagaatt aggcaaaata acaatttcat taatagaata      4680
     actccaaaat tatcaccgac agccaaaaaa gatcaagaag tgaatgcaga ttacgccaac      4740
     cacagattcc acaaagaata ctttgaatgg aactataaag caatagacta tgatctaacc      4800
     agatcattcg catatagaaa cctaatggcc cttatcctcc acaacatttg gatttggatt      4860
     tgcaatcaaa tatacagtga agatccttta acagatgaat cactatcata cagctccctt      4920
     ctaaagaaat ggcacaaatt ggccactcta gaatacatca aaaaagcaaa agatctgaaa      4980
     aacttatcag caaaagacca taataacttc aaagatccta agatccttct cacttcaacg      5040
     atcaagctaa gaaaaacaac agctaattac tattgtattc cagaatcatc tctcccaaat      5100
     attatatctt ttgatcaatt catatgatta aaataaccct tcagcttaaa tgataagcct      5160
     ttaaataaat attaaataaa actcgtatta acacagatgg acatatatca atcttgttaa      5220
     tccaatatta aaaaaaaaaa aaa                                              5243
//
ID   TRE3B     repbase; DNA; INV; 5292 BP.
CC   TRE3B DNA
XX
AC   AF134170;
XX
DT   13-AUG-1999 (Rel. 3.6, Created)
DT   13-AUG-1999 (Rel. 3.6, Last updated, Version 1)
XX
DE   non-LTR retrotransposon TRE3-B, complete sequence.
XX
KW   non-LTR retrotransposon; ORF1; ORF2; endonuclease;
KW   reverse transcriptase; TRE3B.
XX
OS   Dictyostelium discoideum
CC   Dictyostelium discoideum.
OC   Eukaryota; Dictyosteliida; Dictyostelium.
XX
RN   [1]
RP   1-5292
RC   [1]  (bases 1 to 5292)
RA   Szafranski K., Gloeckner G., Dingermann T., Noegel A.A.,
RA   Eichinger L., Rosenthal A., Winckler T.;
RT   "Non-LTR retrotransposons with unique integration preference
RT   downstream of Dictyostelium discoideum transfer RNA genes";
RL   Unpublished
XX
RN   [2]
RP   1-5292
RC   [2]  (bases 1 to 5292)
RA   Szafranski K.;
RT   "Direct Submission";
RL   Submitted (10-MAR-1999) Abt. Genomanalyse, Institut fuer Molekulare
RL   Biotechnologie, Beutenbergstrasse 11, D-07745 Jena 07745, Germany
XX
DR   GENBANK; AF134170; 112.0.
CC   Positions       1    5292  Accession No AF134170     GenBank (rel. 112.0)
XX
SQ   Sequence 5292 BP; 2309 A; 1161 C; 489 G; 1333 T; 0 other;
     aaacaaagaa ataaacgaga atttatacat ataataaata aatcactgtt atatcttcac        60
     cgccacattc attcctctta attttaccct ttttttgctc aataaagcaa gggctatcgt       120
     cctatatact tttcaacaat ggctgatgat cactcaactg aattacagtt aaatcataca       180
     gataacaaca caaccaatac aaataatacc tccacaacct caacaacaaa aaacaaaagt       240
     gcaaaaatcg acacacctaa aaaacaaacc ccaacaaacc aactctcact aaacaaagga       300
     cttgataatc aattagatat cattgcacct ccatcaatca caagaccact ctctttctta       360
     gaaaaaaaca ataacaccat caacattaag tgttacttta atcaaccaca catccgtgaa       420
     gaattaacct caaaagatga cacaagaatt caacaaattc acaaaaacat tcacaaactc       480
     ttcgaagata tactgtcgcc atcagcattc aaaataattg gtgcaactgc cttcgtaaat       540
     tgcaacgttg ataaattaac ttcaataatc aaccttcaaa accaacttgc actaaatatc       600
     gacaaactca actatagatt cgatatatca tcaaatgatt atgcaatcat taaaacattc       660
     attaaaacgt actcacccaa acatgcaaac gatgcaatta caaacaacct cactaaattc       720
     accagttgta catcaattga atcatttact gtcacatact catatgctgt tgcgtttaaa       780
     agctacatta taacatatca tctaattgat cacacacaca acattgttga tcaaaagatc       840
     gaacaaccat ctggtatcac aagatatatc aaagctgcaa cacgtagtgt cactaaacac       900
     aaaattcaac atgcaaaaaa tgcagatatg gcaacaacta taaaaaatgc catcacaaac       960
     ccaaacatga acaaaaacaa tcaaccacca aaaaacaaca ttaacacccc accaatcaac      1020
     gaaattgcaa attccaatcg caataataac tcacttcaaa atagtggttc aaaagctata      1080
     ctaaatgaat cacttgatat taacaatcaa tcccaaaaca ataatgaaat ttcacacaaa      1140
     agtgattctt caaataataa taacgggaaa aactcattat caatgagcaa tccaaccgat      1200
     ccaacaattg taccacaaaa acctctacaa tctcaaccaa acaaaccaag tgcaccaact      1260
     ccaaatacaa taaatacaag aagaagcagc aatgccctga ctacacaacc agtcaatact      1320
     ggtgctgcca aacctagtaa ggtatgagct caaaaatcaa ctttataaca tggaattgta      1380
     gaggattcac tgaaaaccca aacaatcaac acaattccta ccaaaaagct gttgacacac      1440
     tacaactact tatatcaaaa cttccacctc gtccaacaat ctcaatactc actgaactca      1500
     attcatcacc attacaactt aaacatgatt ttcccgatca catcatctct gtcaccaaac      1560
     gaggaaatgg tgtaatcatc attaaccata acccaaacac actcaaactc aaacacatat      1620
     caacaattga tggtagagct attttagcag acgttatatt tccaaatcaa ttaccaattg      1680
     gtattcttgg aatttacgca ccagcatcaa ataataccat caaaaagaat tcatatgcaa      1740
     cttcactaca aacacttctc cacaaccact caacaaaccc aataccaaac caatcccaac      1800
     atgtatctat tatcgcagga gatttcaact gtatccacaa cgacaattca ctattagatg      1860
     atattatcca atcctacaca taccaacacc atctaattga tcaaggtgaa tttaaaaaca      1920
     ctccaactca tacacatggc aacagattag atagaatata tactcaatac aatagaatag      1980
     accctgaaaa tatatataca caagtccacc aaattccatc ttcattatca gatcataatc      2040
     caatatcaac aacaatttct tcaccttttc aaataaataa acataagaaa agatggatat      2100
     tatcacctgg tactgcaaat gaccatgaag caatcaatat tatcaatcat ttaataacta      2160
     atcacaataa cacatcaatc aatcaattta caaactggtc aaaagtaaaa tcaaaaatta      2220
     ttaaaactct aaaaaactat caatataaca aagacaaaca aactcaacgt gcaaaacaaa      2280
     tactattaga aaaagcagca aaattcaaac atcttgaaga acaatgcatc gctgaataca      2340
     atattatatg taacaaaaac aaattacatc aaaaccacac aaacatatta aaaaaacata      2400
     taaatggaga aatacctagc aagtatctat cagcaatact aaacaaaaga tcaaaagatg      2460
     caaaaattga atcaatccaa tatggtaaca tcattacatc cgaccccgac caaattgaaa      2520
     atgcgtttgt tgaattctac acaaatctat atagcttaca aatatgttgt ccaattactc      2580
     accagctcat gctaaacaca tggcccatca taaaaaatga atattggaat ggtttagact      2640
     caccatttat acaagatgaa gttgaagctg caattaaaac ctgtaacccc aacaaatcac      2700
     ccggtccaga tggcgttaca aatgcattct acattaatca tttaaaccaa gttaaaccaa      2760
     ttctcactac attattcaac gatatactag aaaatcctca ccacatcaca acagaattca      2820
     cagaaggtct tatacacaca atatacaaga aaggcaaccc cttactcata tcaaatcgtc      2880
     gtcccattac acttctaaac actgattaca agatcctctc aaaagtaatc aatgcacgtc      2940
     ttctgagaat acttcctttc atcatcaaca acaaccaaac tggtttcgta ccccacagat      3000
     tcatcataga caacatcatc aacatcaatg aattaatcaa ctacctcaaa tctaaaaacc      3060
     tccctggtat catcacacta tttgacttct ttaaagcatt tgattctatc tctcacgata      3120
     gcattaaaag aacattaatt catattggta taccaataaa attaataaat ttaatccaca      3180
     agctattatc tgactcacaa gcaaaaattt caattaatgg taaaacgacc agaaaattcg      3240
     atattaaaag aggtgtaaaa caaggtgacc caatctcagc cactttattt gtaattgtaa      3300
     ttgaaatatt agcaagaaca ataaatgcag acaattcaat aattggatta ccaatttcac      3360
     ccaatccaca aattaaaatc aaatttaccc aatttgcaga cgactctaca acatacaaca      3420
     tcaactacga acaacaacaa caatcaatca aacatttcga taatttctgc gcttcaacat      3480
     catcatcatt aaattttgac aaaagtgcaa taatagaaat caacccccac aaaatcactg      3540
     ataaacacat aataaacaac attccacaat caaaaagaat accaataacc aaaaaagatc      3600
     aatcagaaag agttcttggc tatttcttta atcataatgg tttacatagg aaattaccag      3660
     aaacaatgaa aacactgatt aaatcattag tgctatggaa aactagtggc acaacattaa      3720
     aaacaaaaac aaccatcata aacacctact cactatcacc aataacatat ttatcatacc      3780
     ttgaagaatt tacaaaagat gaagaaattc aaattaataa attaatctca tggtttatga      3840
     attctcccgc aaattctgaa tcaccaactc tcaataccaa ttccattgaa aacaacacat      3900
     caaccatcca ttcacgtgca aaaatacctt tgatgtgtta tgatagatca ttaaaaccat      3960
     taaaagaagg tggttggggt atgtggaata tacaattacg acaagttgct caaaagattt      4020
     ggatatacaa cagattttta caaatgcata aatctgcaaa caattcaata tacatgataa      4080
     gttggatgga tcaaatcatc aacaaatcaa tctcttctcc ataccttata aaaatcaaaa      4140
     aagaatggga aaactatgca actcaaattg gacatctaaa agataaagtt caaatcctac      4200
     aaccaatatt aacaaaaaac caaccctctc aaacattaaa cacaaataat atttcactac      4260
     caccaacact caaagaaatc tactcgacaa tactaaacaa tcaccaatgc aaatcaaaag      4320
     actatattgg caagaaatat tcagatctac ttcttacttc gcaccaacaa tcaatacaac      4380
     tattatggaa atacacatac gaccaacttt ttgtcaaaat tcaaaaatta aaagatccaa      4440
     aaggccgtga tacaatgcaa agattccatg ctagatgtct tccgattaat catctacaca      4500
     acaaagtttg ccccatttgc aacaatgaaa tgaataatga tccctatggt catttgtttt      4560
     tcaattgtca gcacacaatc aacttcataa accacgacaa attaaaatat tttatatata      4620
     aaaattgcaa tggaaacaaa aactggtcac taacaaaaaa ccaaacaaca aaattataca      4680
     cactcattta taaaccacaa acaaacaaca aagcatttaa accagatcca actatcaata      4740
     ttaattttca ttttgcagaa aacgcacaat ataaaaaata caggttcaac tggaattata      4800
     taaacacaaa tcttgatcta gtcagaacac atgcatattg gaacataatc tcattagtta      4860
     ttcaccaaat atggatatgg ttatgcaaat cattatttga catcaatata actcaatcaa      4920
     ttgataattg gaacaaccaa ataaacaaca caacactaga ttatgatata ttaaaatcaa      4980
     aatggcacaa gctaataaga ttggaatatt caagaacatt atcaaacttt aaccaatact      5040
     caattaaaaa caacctcaca aaaactcaaa aagaaaccca atggtccgaa accatcaaaa      5100
     aatttaaaaa agaatggagc ataaacacaa atgaaccaat tccaacaatt acaccaccaa      5160
     ttaattatta attacctaat ctaaaataac ataccatttt aaattcacaa aaactaaaaa      5220
     acctaaaata aataaataaa aataacatac taattgtata ctacaatagt ttatttatat      5280
     caaaaaaaaa aa                                                          5292
//
ID   TDD3      repbase; DNA; INV; 5218 BP.
CC   TDD3 DNA
XX
AC   AF002669;
XX
DT   16-AUG-1999 (Rel. 3.6, Created)
DT   16-AUG-1999 (Rel. 3.6, Last updated, Version 1)
XX
DE   non-LTR retrotransposon Tdd-3, complete sequence.
XX
KW   non-LTR retrotransposon; ORF1; ORF2; endonuclease; 
KW   reverse transcriptase; TDD3.
XX
OS   Dictyostelium discoideum
CC   Dictyostelium discoideum.
OC   Eukaryota; Dictyosteliida; Dictyostelium.
XX
RN   [1]
RP   1-5218
RC   [1]  (bases 1 to 5218)
RA   Winckler T., Tschepke C., de Hostos E.L., Jendretzke A.,
RA   Dingermann T.;
RT   "Tdd-3, a tRNA gene-associated poly(A) retrotransposon from
RT   Dictyostelium discoideum";
RL   Mol. Gen. Genet. 257 (6), 655-661 (1998)
RX   MEDLINE; 98265925.
XX
RN   [2]
RP   1-5218
RC   [2]  (bases 1 to 5218)
RA   Winckler T., Dingermann T.;
RT   "Direct Submission";
RL   Submitted (06-MAY-1997) Pharmaz. Biologie, Universitaet Frankfurt,
RL   Marie-Curie-Strasse 9, Frankfurt 60439, Germany
XX
CC   Comparison of several genomic Tdd-3 copies revealed that element 
CC   insertion is orientation specific and occurs about 100 bp
CC   downstream of tRNA genes in the D.discoideum genome [1].
CC   Tdd-3 encodes two overlapping open reading frames (ORFs) flanked 
CC   by non-redundant, untranslated regions. The deduced amino acid 
CC   sequence of ORF2 (1334-5116) is homologous to apurinic/apyrimidinic
CC   endonucleases and reverse transcriptases (RTs) encoded by the class 
CC   of poly(A) non-LTR retrotransposons.
XX
DR   GENBANK; AF002669; 112.0.
CC   Positions       1    5218  Accession No AF002669     GenBank (rel. 112.0)
XX
SQ   Sequence 5218 BP; 2177 A; 1268 C; 667 G; 1106 T; 0 other;
     ccgtaccgcg atcaagagga tacaagatac acgtgaaaag taattcatcc ttttctatct        60
     ttaatctcgg tcaattttaa ccaatctttc aaaaaaaatc accaatccac cacgatttac       120
     agatctaaca taccaaatcg ccgattcaaa ggaatcccat cgagatgaat tcctacgcag       180
     acgcggctaa aatggccaac ccctccaccc atatggacga ggcatcggag aacttcatta       240
     aggaattctc cacaaaaaca gcagagataa aggagaccta ccccaaacta tcaataggcc       300
     tcaaagacat ctccaaatac tgcgagacca tattgaacat gactgcgctc tcaacctatg       360
     agaagaacaa cggattctac ccaattacac tcgaattccc caaaatggat ctcaaggggt       420
     tagaagaaat gagaaaaaca ctctcaaact acgatatccc attcgacaag atatacatag       480
     gcaaaggaac tagaaaaatg atccacctga tgattaaaaa cgaacaatct ctcctaaata       540
     tcattagaga tagaagcaaa ttgggaacct tcatcacctc cagtagagac ttccacgtcc       600
     tcacaggaag agtaagaatt cccagagaaa aggcaggaat agtggacgcc ctcatcaaaa       660
     ctgcctttgc agaagaaata ccctatgcaa tatacaatac tatatactcc accgaccacc       720
     tcatagtatt cggtctaata gaatgcaaaa taggcgatca aatgaaatct ggccaacaca       780
     ttacagaaat cgcaaacttt accatcagaa cggccaccaa aacctactcc tcacaaaaga       840
     aaaacaagaa agtagagaca aacaacacgg aggaaccatt agaagatgag atgacagatc       900
     ctcctaacac ccaaaacagg atagcaatca aatcctttca acccaaacca caacaacaaa       960
     caaacaaccc agcaaacaat cagtttgaaa aacaatcaac acaagagaaa aaagcccaag      1020
     caaaaaagtc atttcaacct tttcccccca aaaacccagc agaatctcaa tttgtcaaac      1080
     ccaccacaac cactaccaca acatccaacg ccatccaaaa agacaatgcc aacaaaacga      1140
     gcaataacat ccattcatcc tcggaaaaca gagagaagac actaaacatc cctccatcac      1200
     ataaacgcaa gaacgaggaa atccactcaa acaatgaagt cacccaactc tcaccaacaa      1260
     taaacagaag caacccttac atcccatcca cccctaagac acctgtcaaa aaagaaagta      1320
     aaggaatcat tgagagcttc atagagagta tctacccttc accatccaaa ccgcagctat      1380
     acgactccca agaggagatc gatatcatct cataatagta gtaatcaaaa tcaaccaatg      1440
     gaatgtcaga ggttggggca ctgacacctc cttcaaaaac aaaacagact ttatcaaatc      1500
     ccaatccccc ccaaactcat tggcactaac catagtcaat gaactcaacg ccgacgcaac      1560
     acaagcacac cagctattcc ctggctccat cattagcgca accaacagag gcaacggaat      1620
     aggaatacta aaccacaaca accaaaacat aaaactctca ccaatattca taatagaagg      1680
     tagactaata atatcagaca ttctaataaa agataccaca acgagaatct tggccatata      1740
     cgccccggcc caacctgata aaagaaaaac actagcttca acactaaaca aacacttcaa      1800
     caaccaatac cacaacctaa cgtctaaccc taataaaaac atcgacatca tagcaggaga      1860
     cttcaactgt ttagacttca atgacaatca cacatcaaat gatgaccaag gcaacttgac      1920
     aacacaatcc ccagatgaga tggccacagt aatcgaagcc atcagaattt caaataacct      1980
     aatggatatg gaccaactaa ataaaagacc caccttctca agaacgatac acaacacaaa      2040
     caataacctc acaagaatct tggaaaggag actagacaga atatacctta acaatagctt      2100
     aatcaactac agccaattat acctaaggaa cctaatcccc ccaaaaatta acgacatacc      2160
     tctatcagat cacaacttcc tatcaaccac cttcactcta cacaacatac agacgaacat      2220
     gcgcagatgg agattaaaaa aatcctcaat cctctcaagc ataatgctta agaatataga      2280
     cttcctactt aacggttatt caagggagct gtcatccaac cataactcta tttccttctc      2340
     tcaactcaac agcttactga acaaaataaa acaactatac accgaatttc aaaaacaaaa      2400
     cgactacaac aataaggcaa acatcaaaaa tctaatctcc ctactagaga cagaatttaa      2460
     agaccaagcc tttgcaaccc tttcagcaat aaatgaatct aaaaaaagag aagaacaact      2520
     taaacaagaa ttgaacaact attgcgaaga aacctcactc aagtacatct ccgcgagaat      2580
     caagaaaaga cacaatgatt tcaccatcaa cgcagtaaaa gatacacaag gtagaacaat      2640
     caacaaacag gaattgatcg aagaagaata cgtaaaatat tactcaaatc tttatgacta      2700
     caaagaagat gacccaccat ctcattatga aatcttggaa aattggacag tgaccaggga      2760
     ctcaacatgg gacaaccttg aaaatgaatt cacatcacaa gagatcctag aagtaataaa      2820
     acaattgaac ccacacaaat ctccaggccc agatggaatt ccaaacttat tctacataac      2880
     acacaaagaa aaactagctc caatactggc ctcagcattc aacgacactc taagaaatcc      2940
     tcatctaatt agcaaaaatt acaaagaagg cctcattatc acgataccta aaaagggaga      3000
     tcccgaacta atcaaaaaca gaagaccaat tacactggct aactgtatat ataaaatcca      3060
     ctcaaaacta ataaacaata gaataatccc aatactaacg aaagtgatca accacaatca      3120
     aaaaggtttc gtaccaggca gattcattct gcataatatc atatcaatta acgaattaat      3180
     caactattgt aatgataaaa gaattaacgg aataattaca ctatatattt cgaaaaagct      3240
     tttgactcga tctcacacgg ttcaatctca gatcactaca acacatcaac attccaacca      3300
     atatatcaac ctgataatga atctactcac caaatctgag gcaagaattg aaattaatgg      3360
     tagaactact ataccctttg agatcaaaag aggagttaaa caaggagatc cactatcacc      3420
     caccctgttc gtccttgtaa tagaggcttt agctagaaaa attttacaag atgaccgaat      3480
     tactggcctt cctctaaaca acagcaacca cagagagaaa ttccaaagct ttgcagacga      3540
     ttcggcttca atggtcccag actctcaaca acttgaatta gtactacaac acttcaattc      3600
     attttgcaaa gccactcctc aaaacaaaca tcgacaaatc ttcatcaatt cttataggca      3660
     acccagacaa taccaaccaa agaattccaa tatctacaaa tccagaaaga tacttgggat      3720
     acttcttcac aggcaaaggg ataacaagaa aaatgccaga aatattaaac acaataagat      3780
     catccttagt actatggaaa accactttct caacaatcaa aaccaaaacc aaccttcctc      3840
     aaaagcattc gcactctcta aattaaccta ctattcatat gtagagaact ttaaggaaga      3900
     ggaattaaac caaatcaata aactagtcga atggttttta tcggcaccaa acaacaaaaa      3960
     tgctagtgga tttcaagtta ttaatttaat gagaaccaaa agagcaagat acccactaaa      4020
     agtagggggc tggaacattt ggaatataga attgagacaa ctggcgcaga aactttggat      4080
     cataaaccag ttcatcctag cactagaaac caaacaaaca aactcatctc atcacaaaag      4140
     ctgggaatat cagatccaaa aaaacaaatt cacatccaga tacctaaaag aaaacttaga      4200
     cgaatggaac aaaataagaa taaaaaaagc aatcttcaac aataatctca catccataaa      4260
     aaacgaaaat ggacaaccac tttcactggc agaatggtat accacaattc aagaccaaaa      4320
     tccaaccatc cctaaaacgg aattccaatc atctctaaac ttaagaggct acagctataa      4380
     tcaactcttc aacaacatac tgaagataaa agaccctaaa acaagagaca caatgtttag      4440
     attccatgcc agatgccttc caataaacta ccttcacaac aaacaatgcc cactctgcaa      4500
     agaagatatg agcaaagacc catacggtca cctgttcttc tcatgcaaga aaacaaaaca      4560
     attcataaaa ataaataaac tcaaaaattt catctatatt accacaggca aaggtaaaaa      4620
     ctggcaccat acaagaatta ggcaaaataa caatttcatt aatagaataa ctccaaaatt      4680
     atcaccgata gccaaaaaag atcaagaagt gaatgcagat tacgccaacc acagattcca      4740
     caaagaatac tttgaatgga actataaagc aatagactat gatctaacta gatcattcgc      4800
     atatagaaac ctaatggccc ttatcctcca caacatttgg atttggattt gcaatcaaat      4860
     atacactcaa gatcctttaa cagatgaatc actatcatac agctcccttc taaagaaatg      4920
     gcacaaattg gccactctag aatacatcaa aaaagcaaaa gatctaaaaa acttatcagc      4980
     aaaagaccat aataacttca aagatcctaa gatccttctc acctcaacga tcaagctaag      5040
     aaaaacaaca gctaattact attgtattcc agaatcatct ctcccaaata ttatatcttt      5100
     tgatcaattc atatgattaa aataaccctt cagcttaaat gataagcctt taaataaata      5160
     ttaaataaaa ctcgtattaa cacagatgga catatatcaa tcttgttaat ccaatatt        5218
//
ID   R2A_TM    repbase; DNA; INV; 1410 BP.
CC   R2A_TM DNA
XX
AC   AF015817;
XX
DT   26-AUG-1999 (Rel. 3.7, Created)
DT   26-AUG-1999 (Rel. 3.7, Last updated, Version 1)
XX
DE   Tenebrio molitor retrotransposon R2 reverse transcriptase gene,
DE   partial cds.
XX
KW   R2_TM; R2A_TM.
XX
OS   Tenebrio molitor
CC   yellow mealworm.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
OC   Cucujiformia; Tenebrionidae; Tenebrio.
XX
RN   [1]
RP   1-1410
RC   [1]  (bases 1 to 1410)
RA   Burke W.D., Malik H.S., Eickbush T.H.;
RT   "R1 and R2 Provide an Estimate of the Age and Stability of
RT   Retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-1410
RC   [2]  (bases 1 to 1410)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
DR   GENBANK; AF015817; 110.0.
CC   Positions       1    1410  Accession No AF015817     GenBank (rel. 110.0)
XX
SQ   Sequence 1410 BP; 441 A; 334 C; 357 G; 278 T; 0 other;
     gcctacgcgg acgatatcat cctgcttgca gataacgtcg agactgcgca aagacttctc        60
     aacgcctcca caagattctt tgaagaccgg gggctcgaca tcaaccccgc gaagtgcgag       120
     tctctagtga tgcgtactct cccgtcaaag aagaaggtct tcactgtgac aactccgcaa       180
     ttctacgtta aggctgaacc gatcaagcca atagaagttg gaaaggcttt taaatatctg       240
     gggcagcagt tcacatgcac gggttcaacc aactgctcaa ccaaagatct aagcgaacag       300
     ctacttagaa taaagaaggc cccactgaag ccccaacaaa aaataaacat catcaaaacg       360
     tatctgatgc cggcctacat ccactcaatg cagaacccag ccgtcaacaa aaagatatta       420
     cgagaagtgg ataggaaaat cagaatggtc gttaagggga tactacatct tccactccat       480
     ttgtccaaca ccgcaatata tgccccggcg aaaatgggag gtctaggaat gttttccttt       540
     tcaagaaaga tccccatcat tgtactaaaa cggttaaaca acttaagccg tacttgctcg       600
     aacttccacc ttgtgttgcg agaggccgcc ccatgggtca atagattaaa gaaaatggta       660
     aggccagacg taacgacaaa agagcaagtg gacagagcaa atggggtgga acatgagggt       720
     tcgtactacg gcggcggtac gatgcaatgt cggaacgact ctgcttcaaa tacttggatc       780
     aacacccccc caaggtattg gaccggatcg gattacgtga aagcggttca gctaagactg       840
     aattgcctgg ccaccagagg ccttccctat aacccgccgg aacaaagaag atgcagagcg       900
     ggatgcgaca gggttgaaag cctgtcgcac gtcttacaga aatgccctct aggacacaca       960
     atgaggatga gaaggcacaa ttacatcgtt aaaaggctta agaccatggc tctgaagaag      1020
     ggatggacgg tggaggagga gccgatatgc gatgcgcgcg gtgtactgag gaagccagac      1080
     cttatcctca gcaatgaaga gacggcccta gtagtggacg ccatggtgtc ctgggagtgc      1140
     cccagagacc ttgcagagac attcgattgc aagaggctgg tatatgacca gcctgagttt      1200
     accagcgtac tcgaatctaa ataccatcca aggaatatca gagtactacc cttcatcatc      1260
     ggcgcaagag gtatgtggtg cagacagagc accgaaacac tagaagcgat gaaggtgaac      1320
     aatgtgagca atcgaaggga actggtccat acaacactga gaggaagctg gagtatacat      1380
     cgagaattta cgaggagaag ctgggaatag                                       1410
//
ID   R2B_TM    repbase; DNA; INV; 1467 BP.
CC   R2B_TM DNA
XX
AC   AF015822;
XX
DT   26-AUG-1999 (Rel. 3.7, Created)
DT   26-AUG-1999 (Rel. 3.7, Last updated, Version 1)
XX
DE   Tenebrio molitor retrotransposon R2 reverse transcriptase gene,
DE   partial cds.
XX
KW   R2_TM; R2B_TM.
XX
OS   Tenebrio molitor
CC   yellow mealworm.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
OC   Cucujiformia; Tenebrionidae; Tenebrio.
XX
RN   [1]
RP   1-1467
RC   [1]  (bases 1 to 1467)
RA   Burke W.D., Malik H.S., Eickbush T.H.;
RT   "R1 and R2 Provide an Estimate of the Age and Stability of
RT   Retrotransposons";
RL   Unpublished
XX
RN   [2]
RP   1-1467
RC   [2]  (bases 1 to 1467)
RA   Burke W.D., Eickbush T.H.;
RT   "Direct Submission";
RL   Submitted (24-JUL-1997) Biology, Univ. of Rochester, 135 Superior
RL   Road, Rochester, NY 14625, USA
XX
DR   GENBANK; AF015822; 110.0.
CC   Positions       1    1467  Accession No AF015822     GenBank (rel. 110.0)
XX
SQ   Sequence 1467 BP; 377 A; 337 C; 373 G; 380 T; 0 other;
     gccttcgccg acgatttggt gctccttgct gacagtgcca aggacgccaa taggctgtta        60
     tcggaggcct cgcagttctt tgcggatcgg ggactcgaat tgaacgttgc caagtgctgt       120
     gccttgtcaa caggtgtagt tccgtccaaa aagaagtgtt cagctcgact tagatcttat       180
     tccaggctga acggtgccca catccgtcaa gtggcgattg gcgatgtctt caagtatctg       240
     ggcaatcact tcgctttcga tggcgttagt gacataagct tggaggaact aaactctcaa       300
     attaataatt tgatgaaagc cccgttaaac tctcaaatta ataatttgat gaaagccccg       360
     ttaaagcctt ggcagaagtt caaaattctg aggcaaacat ctgataccat cgggtggata       420
     cactgccttc agagcccttc tgtttcgaat aaagtcctaa gggaggctga caggaaaatt       480
     aagagagcgg ttaaatcgat tcttcactta ccggttacta ttgccgactc gtcgatctat       540
     gcaagccagc gcgatggtgg tctcggggtc ttctgcttct caaggaagat tcctgtcatt       600
     cttcgctcgc ggtgggagtc gctacaggag atggctgatc ccgcgcttgg cgctgttctc       660
     ctgcaatcgg agagatgcat ggatagagtc tcgagactaa ttaaagagga ctggagatct       720
     gacagcgaaa tcaagaacag ttttaggcgg agccttgaga attcttggtg cgggggtgga       780
     atccatcaag tagggataat caagcttgca agtaaatatc tgctgcaccc ccctgccttt       840
     tggacaggaa gggactatgt gtccacaatt cagctgaggc tgaacgcgct tccttccaga       900
     ggtttaccat ccaacccccc cgaccagcgt atgtgtagga ctggatgtgg cagatctgag       960
     tccctatcac acatcttaca gagatgtgga ttcgttcagg gccatcgaat atcacgccac      1020
     aaccatgtcg caaggaaaat taggaggttg gccgagtcta aggggtggga agttagggag      1080
     gagcctacta tccgcaccaa tgaacaggtt ttcaaaccgg atctacttct gattcgcgat      1140
     aatgaattaa tagtgtgcga tgtctccatt aactgggaag gtccgtccca ctttccacac      1200
     actatcagga taaatttaat aagtatgcca ctccaggtgt tatccaatgg ctgcaacaac      1260
     gattttcccc gacaaactgt cagattcctt ccctttatat tgggtgctag gggatcttgg      1320
     tgtggcgaca acaggagttt agttgacgcg cttgaactca cacagcgcaa tatagaagat      1380
     ctaatactta catgtctcac tgggagcctt atcatctata agagcttcat gaagtcggtc      1440
     tggaggagga ctgtcgcggg tgactaa                                          1467
//
ID   DEC1      repbase; DNA; INV; 502 BP.
CC   DEC1 DNA
XX
AC   AJ132474;
XX
DT   24-APR-2000 (Rel. 4.0, Created)
DT   24-APR-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   DEC1 is a putative nonautonomous DNA transposon.
XX
KW   nonautonomous DNA transposon; MITE; TIR; DEC2; DEC1.
XX
OS   Tenebrio molitor
CC   yellow mealworm.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
OC   Cucujiformia; Tenebrionidae; Tenebrio.
XX
RN   [1]
RP   1-502
RC   [1]  (bases 1 to 502)
RA   Braquart C., Royer V., Bouhin H.;
RT   "DEC: a new miniature inverted-repeat transposable element from the
RT   genome of the beetle Tenebrio molitor";
RL   Insect Mol. Biol. 8 (4), 571-574 (1999)
RX   MEDLINE; 20099038.
XX
CC   28 bp terminal inverted repeats; about 87% identical to DEC2 in the
CC   first 428 bp.
XX
DR   GENBANK; AJ132474; 116.0.
CC   Positions       1     502  Accession No AJ132474   GenBank (rel. 116.0)
XX
SQ   Sequence 502 BP; 168 A; 65 C; 72 G; 197 T; 0 other;
     tacactgacc ggcacaaaaa acgactcatt atgatttctt aataaatgat cttgaaatta        60
     ctttgtgctt atttttcttt attatagtta aattgggata ttttgaatga tcgggagtgc       120
     catggtcacc atggcaaccg aatgttttgt ttaaataaat tataataata aatttgcgct       180
     acttccacgt tgtgtttttg atggttgatt tacgtgttaa aagatctaat gtgacaatac       240
     gagatactaa ctcaaaatgc tgttcaaatt ttggcaattt ttcataacat aaaatttttt       300
     ctgaaaaatt acttttattt ttttttcact aaaattttat ttgctgtgtt taatgttttg       360
     tttgtcggat atctttgaca aagaataact taaataacac ttatcaatac aacatgatat       420
     caaaaaaaaa ttctaagaca atgaattgct taattatatt aataaaattc aaagtgagtc       480
     gttttctgtg ccggtcagtg ta                                                502
//
ID   DEC2      repbase; DNA; INV; 465 BP.
CC   DEC2 DNA
XX
AC   AJ132475;
XX
DT   24-APR-2000 (Rel. 4.0, Created)
DT   24-APR-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   DEC2 is a putative nonautonomous DNA transposon.
XX
KW   nonautonomous DNA transposon; MITE; TIR; DEC1; DEC2.
XX
OS   Tenebrio molitor
CC   yellow mealworm.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
OC   Cucujiformia; Tenebrionidae; Tenebrio.
XX
RN   [1]
RP   1-465
RC   [1]  (bases 1 to 465)
RA   Braquart C., Royer V., Bouhin H.;
RT   "DEC: a new miniature inverted-repeat transposable element from the
RT   genome of the beetle Tenebrio molitor";
RL   Insect Mol. Biol. 8 (4), 571-574 (1999)
RX   MEDLINE; 20099038.
XX
DR   GENBANK; AJ132475; 116.0.
CC   Positions       1     465  Accession No AJ132475    GenBank (rel. 116.0)
XX
SQ   Sequence 465 BP; 153 A; 62 C; 62 G; 188 T; 0 other;
     tacactcacc ggcacaaaaa gcgactcatt atgatttctt taataaataa tcttgtgctt        60
     attttttttt tttataatag ttaaattgag atattttcaa agatcgggag tgctatggtc       120
     accatggcaa ccgaattgtt ttgtttaaat aaattattga aaagtttgcg ctacttccat       180
     gttgtgtttt ggtcggttgt tttacgtgtt aaaattttta atttgacaat acgagatact       240
     aattcaaaat actgttcaaa ttttgacaat tttttgtaac ataaaatttt tttctaaaaa       300
     ataacttatc atttttcatt aaaatcttat ttcctgtgtt ttaatgtttt gtttgtcgga       360
     tattttttgg caaagaataa cttaaatagc acctactaat acaacatgat accaaatgaa       420
     ttacttaaaa ttcaaaatga gtagactctt caaacgatca ttgtg                       465
//
ID   TRE3C     repbase; DNA; INV; 4751 BP.
CC   TRE3C DNA
XX
AC   AF134171;
XX
DT   24-APR-2000 (Rel. 4.0, Created)
DT   24-APR-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   TRE3C is a non-LTR retrotransposon - a consensus sequence.
XX
KW   Non-LTR retrotransposon; LINE; ORF1; ORF2; TRE3; TRE3C.
XX
OS   Dictyostelium discoideum
CC   Dictyostelium discoideum.
OC   Eukaryota; Dictyosteliida; Dictyostelium.
XX
RN   [1]
RP   1-4751
RC   [1]  (bases 1 to 4751)
RA   Szafranski K., Glockner G., Dingermann T., Dannat K., Noegel A.A.,
RA   Eichinger L., Rosenthal A., Winckler T.;
RT   "Non-LTR retrotransposons with unique integration preferences
RT   downstream of Dictyostelium discoideum tRNA genes";
RL   Mol. Gen. Genet. 262 (4-5), 772-780 (1999)
RX   MEDLINE; 20092482.
RL   PUBMED   10628860
XX
CC   ORF1: 259-1131; ORF2 (reverse transcriptase):1131-4574.
CC   This consensus sequence has been constructed [1] from 161
CC   independent reads on genomic shotgun clones. 
XX
DR   GENBANK; AF134171; 116.0.
CC   Positions       1    4751  Accession No AF134171     GenBank (rel. 116.0)
XX
SQ   Sequence 4751 BP; 2208 A; 910 C; 589 G; 1044 T; 0 other;
     aaaagcctac agttgatcaa acggatacta gatacagaaa aacatatcca tcatcaatct        60
     aacatcaact acattcaatc tatctactct acacactaat tccttcaatc cttggattgg       120
     gaataagaat agatctgaat aaacgagaaa gaaaaaaaaa aaaaataaaa ataaaaatca       180
     aaaatatttt tatataaaca cataattaaa aaaaaaaata ataaaaataa tataaaaaaa       240
     aaaaaaaaaa aaaaaaaaat gaattttttc gataaactta aaggtgaact caacttaggc       300
     gaagaagagt taaataaaaa aactattcaa ataaggttat tctacccaca taccttggaa       360
     ttaaatagta attcaacaaa attaatagat aatttcatag ttaatggtac tcttaacatt       420
     gtcagaagac aaaagggtat aacagtattc ggtagaatac taaaagaaaa attcacatta       480
     ttacacgagt gttacagcac tttcaagtat gaagatttcc cactgcaaaa attcatactt       540
     tacaccccag gatatcacta tgtccacttt tacacattta caaaaaacat aataaaaaaa       600
     ataaacaatc aaatggtaaa agaaaactgg ggattggagc cattactaat agatgaatgc       660
     aacatagtaa tgctaccaga tgtgattaga tattcatgca tactattatt taataaagaa       720
     gatgatatct caatcattaa aacaaacatt gatgctataa aaggtagtaa gcatccaata       780
     agagccttca tctctgaata taacaataaa gaaataagag atgttagaaa aaaaaaaaac       840
     acaagtaata aaaatcaaca accaacaact acaaatacaa ctaaatcaat accatcaact       900
     ccaccaacaa ctaatgcatc aacaaccaca ccaataacaa ccacaccaat aacaaccaca       960
     caaacaacaa ccacaccaac aacaaccaca catcaattac caacaagcaa tacaacaatc      1020
     aacaacctaa acaaaactac tactactact actactacta caaaacctat caataaaatt      1080
     actacaagca atggtaccaa gtttccaatt gccagtagta ttagaaaata atggaacaat      1140
     taaaattatt actatggaac tgcagaggta atcaatcaac caacgctaag aataaaacag      1200
     aagaaacgat aaaaagaatt ggcactcaat tagcactcct aactgaaact aatttcaatg      1260
     gattcaacca ccacaaaaca atgttcaact ttgaaagaat agatcatggt tcaggtaaag      1320
     gaactggcat agcaatagaa aatagagata caagaaaagg ccacatatca ataaacttca      1380
     aagacgatga tggtagaata ctatcaatta aatacaattc ctttaattct atcaacatat      1440
     tattgatcta tgctccagcg actatatctg aaagaaacac cttcataatc aactcaaaat      1500
     cactgtttaa aaaatataat tcaatcaacc atcaaataat agcaggcgac ttcaataaca      1560
     accacgattg caacagcttc ttcggtactg aattacgtaa aataatagac caagacatgc      1620
     tactagatac tggtattgaa gaaaacactc caacatttcc aagatcaatg aagagactag      1680
     atagaatcta ctgtcatcca acactactaa accaaaattc aaaactggta gtccacaaca      1740
     cagtatttaa caaatcagat cactttccca tcacaatcac aatacaaacc aacagagaaa      1800
     caacaacaac aacaacaacc aaactagaaa gactcccttg gacattatgt aaagaaattc      1860
     tcaacaacaa acatatacat gatgggttat cagaattaat cagtaagaac aaagataaga      1920
     tcaaatcagt ggaggaatgg acgaaattta aaaataatgt catcagagat tatttaaaaa      1980
     aagaacaaaa caaaataaag aaagaaaaga acaaaagaaa atacgtaatc cacaaattac      2040
     ttggaaatag tgatatcatt ccaaagatga gaaaagaact caatgaagaa ataagtagaa      2100
     tattagaaga agaaagaaag gtaaaagcat gggatatcaa attaaaactc cacctgcatc      2160
     aagaaacacc aagcaaatac ctcacaagta tccttaaatc cagagccaaa gataaatcaa      2220
     tattccaaat aaaagataaa gataataaga ccatatcaga taaagagaac atagcaaaaa      2280
     gatttgttga attctatcaa gatcaatatg aagagaaaga agataacgaa gaaacccaca      2340
     agaagttatt agaaaaatgg gaagtagacg ttgatttaat caagaaactc gagatagaca      2400
     gaccgataag aatacatgaa gtgaccaaag caatcaaaac ttcaagtatc cacaaatctc      2460
     caggtttaga cggtatcaat gcactattct acaagtacca catcaactca atagcaagaa      2520
     tattgactat agctttcaac gacctcctca caaataagaa agaaatcccc acaaaattca      2580
     aagaaggagt aataacaaca atattcaaaa aaggagatga actaaacatt tcaaatagaa      2640
     gaccaatcac ccttctcaat acagattaca aaattttaag caaaattctc aacagtagat      2700
     tattagatat caccagtaaa attatcaaca aatttcaaaa cggctttgtt ccaaacaggt      2760
     tcatccaaga caatattcag atcatgaagg aagtaataga aataagtaac aaaagaaaga      2820
     acaatacact cattaccttt tacgatttta acaaagcatt cgattcaatc agccacaaga      2880
     gtatcacaag aacattagag catattggta tccccccaaa attcacagcg atcctactaa      2940
     acctactcaa agatactaaa aacaaaataa agatcaacga ctttttagtc aatggaataa      3000
     caatcagaag aggaacaaaa caaggagacc caatatcacc aacaatcttt gctctagttt      3060
     tagaaccact tctaatagat atcatcaatg ataatacaat caaaggcttc actctaccaa      3120
     attccaaatc attaaaactc actgcatttg ctgacgacat agcaacattt acaaactcca      3180
     ctgaagaact aatgaaaatt aatactaaaa tccaaaagta ctgctcagca acatcatcat      3240
     cgttaaacaa agagaaaaca gtaatgatag caataggaga taaaccacac gatctaccat      3300
     tccaagagag tacagtccca gaaagatatc ttggcctcaa tttcaccaaa acaggtttaa      3360
     attcaaaata caacacttta atccaagaaa tgaaaaacaa tctaatcaaa tggaaatcac      3420
     aagcaataac gatgaaggca aagatgacaa ttctcaaaac atacgttcta tccaaattaa      3480
     cataccatca atacatggat aatctaaatg aagaacaaat tgaggaaatc aataacatga      3540
     ccagatggtt cttattctcc tcagttaaga atacatatac agaagagaga aaatacaaaa      3600
     ctatgatgaa aatagacaga gcatatgcag attggaaaga aggaggcata aaattatggg      3660
     atatagaact aagacatata gcattcaaaa tctggtacat gaacaggcta ctccataaca      3720
     actacaacaa caacaacaat accttacaag aatggtacat ggagcaatta agtagaaaaa      3780
     aagcccacac ttcaaccctc aacgatatgt gcagacactg gggtgtattc agagtcaaat      3840
     tttaccaaaa ccatccaaag ataaatgaac ttccagactg tataagaaac gacaatgacg      3900
     aaccactaaa actgaaagaa atttacgaac tcatgatcaa agacagacac ccaacaccaa      3960
     gaagaacaga atggcagaag ttatgggcgg tgagatacaa cacagcaata cccaaagtat      4020
     tcataaacat caacagcatt tctcaccaaa aaggtagaaa caccctcttc agattcttct      4080
     caagatcact tccaggtatc aaccacgaaa gagacaccag atgcaagatc tgtggccacc      4140
     tattcagaga cccttattct cacctcttca ctctatgcca agatatccta gatattgaaa      4200
     aaaccatcat atcaacagtt aacaaattat cattcatcaa aatccacaga tggtcaatgg      4260
     ataccttaga catatcaaaa tacaacagaa ctgagagaat cttccccaat ctcataggaa      4320
     taatagcaca ccaattatgg aagataatct gtcacaaatt gttcaacact gatgaaagca      4380
     aaccagagcc aaaattcgaa caaaaggtca tagaaacaga attactaaat ctcatcgaaa      4440
     ctgaaaaatt catcacacta aagaaaatca aacacgacga agcaatacta aaaaacacca      4500
     atcaagatct tcacaaatac aaattcaaca aagcctggca aaccccagca gctccgaacc      4560
     ctcttccaat ttaagtagta gtaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      4620
     aaaaaatata atatagttta aaaaatttaa tacaattgaa taataaaaat aaaaccgttt      4680
     aacaaacacc gccgaaaaga cacaaggaca ttccttgaag gtctgatcac aggtaaaaaa      4740
     aaaaaaaaaa a                                                           4751
//
ID   AACOPIA1_LTR repbase; DNA; INV; 270 BP.
CC   AACOPIA1_LTR DNA
XX
AC   AF134899;
XX
DT   30-MAY-2000 (Rel. 4.0, Created)
DT   30-MAY-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   AACOPIA1_LTR is a long terminal repeat from AACOPIA1, a copia-like 
DE   LTR retotransposon.
XX
KW   LTR retotransposon; endogenous retrovirus; MOSCOPIA; AACOPIA1;
KW   AACOPIA1_I; AACOPIA1_LTR.
XX
OS   Aedes aegypti
CC   yellow fever mosquito.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Aedes.
XX
RN   [1]
RP   1-270
RC   [1]  (bases 1 to 9037)
RA   Tu Z., Hill J.J.;
RT   "MosquI, a novel family of mosquito retrotransposons distantly
RT   related to the Drosophila I factors, may consist of elements of
RT   more than one origin";
RL   Mol. Biol. Evol. 16 (12), 1675-1686 (1999)
XX
RN   [2]
RP   1-270
RC   [2]  (bases 3916 to 8566)
RA   Tu Z.;
RT   "Mosqcopia, a novel family of LTR retrotransposons in Aedes aegypti
RT   are associated with genes and other transposable elements";
RL   Unpublished
XX
RN   [3]
RP   1-270
RC   [3]  (bases 1 to 9037)
RA   Tu Z., Hill J.J.;
RT   "Direct Submission";
RL   Submitted (16-MAR-1999) Department of Entomology, The University of
RL   Arizona, Forbes 410, Tucson, AZ 85721, USA
XX
DR   GENBANK; AF134899; 116.0.
CC   Positions    3916    4185  Accession No AF134899     GenBank (rel. 116.0)
XX
SQ   Sequence 270 BP; 63 A; 72 C; 49 G; 86 T; 0 other;
     tgtggagaat gcatcggtgt accccttcac tactgcacga atacccattc ccaccattct        60
     ggcaaccgtg cactctttcg tgtacgacag ctaggagaag agaaaaaaat gttttttttc       120
     agttcaaatc taacactcgc cgcgtgcata caaactttgt atttctttgc ttaataaaac       180
     catcgttaaa gttatttccg cgtgtgttct cgttattccg ctggttctcc cgaatccccc       240
     gatccgctgt gttgcctgtt tctgctaaca                                        270
//
ID   AACOPIA1_I repbase; DNA; INV; 4110 BP.
CC   AACOPIA1_I DNA
XX
AC   AF134899;
XX
DT   30-MAY-2000 (Rel. 4.0, Created)
DT   30-MAY-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   AACOPIA1_I is an internal portion of AACOPIA1, a copia-like 
DE   LTR retotransposon.
XX
KW   LTR retotransposon; endogenous retrovirus; MOSCOPIA; AACOPIA1;
KW   AACOPIA1_LTR; AACOPIA1_I.
XX
OS   Aedes aegypti
CC   yellow fever mosquito.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Diptera; Nematocera;
OC   Culicoidea; Culicidae; Aedes.
XX
RN   [1]
RP   1-4110
RC   [1]  (bases 1 to 9037)
RA   Tu Z., Hill J.J.;
RT   "MosquI, a novel family of mosquito retrotransposons distantly
RT   related to the Drosophila I factors, may consist of elements of
RT   more than one origin";
RL   Mol. Biol. Evol. 16 (12), 1675-1686 (1999)
XX
RN   [2]
RP   1-4110
RC   [2]  (bases 3916 to 8566)
RA   Tu Z.;
RT   "Mosqcopia, a novel family of LTR retrotransposons in Aedes aegypti
RT   are associated with genes and other transposable elements";
RL   Unpublished
XX
RN   [3]
RP   1-4110
RC   [3]  (bases 1 to 9037)
RA   Tu Z., Hill J.J.;
RT   "Direct Submission";
RL   Submitted (16-MAR-1999) Department of Entomology, The University of
RL   Arizona, Forbes 410, Tucson, AZ 85721, USA
XX
DR   GENBANK; AF134899; 116.0.
CC   Positions    4186    8295  Accession No AF134899     GenBank (rel. 116.0)
XX
SQ   Sequence 4110 BP; 1108 A; 893 C; 1189 G; 920 T; 0 other;
     ggtgatgggc ccagcgcaag gcccccgcgg gatttgtgaa agtgaagaaa agttttggcc        60
     ggccgagctg agccgccatt gctggtgttc cgctttggaa gcgaagagtg gaaaagaaca       120
     tcgcgaaggc cccatcgtgc gggtgtgtta gtgagtttac cggccgagtg agaaaaagtg       180
     cacgagtgca aaaatggccg acgcgaaatt ttcgatcccg aaacttaacg ggacgaattg       240
     ggcaacgtgg aagttgcgag tggaaaactt gttggcccgt gacgatttat gggatgttgt       300
     ggtcgaggaa gttcccgacg agtttgaccg tgacgatgac tggaaaatcg cgaatcgcaa       360
     ggcgaaggcg acgctggtgt tactgttgga agacagtcag ctcgccatag tgaagaagtg       420
     tgtgttcgct cacgatgtgt ttggtgcgtt aaaggcgtac cacgagaaga gtacccgttc       480
     ggtgcgcgtg tccttgctca aaaagttatg tgcgatcaat ctttcggagc gcggtgactt       540
     agaacaacat ctgttcgaag ttgacgattt gtttgaccgt ctcgacgccg cgggcacaac       600
     tctggacgca gatacgaaaa tctgtttgtt gttgaggagt ctcccaccct cctttgacgg       660
     gctagtcaca gctcttgatt cgcggtcaca agatgacatt acgctcgaag tggttaagtc       720
     caaattgatg gacgaattcc agcgccggct ggaacgcgac ggtcatccgg tgaagaaaga       780
     aaaggcaatg aaaactgccg taacgaagac gggtgaaacg cgtgtgtgct tttattgcaa       840
     gaagccaggg cacttgcaac gcaactgccg caaacttctc gagacgaaga aagaagaaaa       900
     caacagctcg tcgtccggca cgaagccgaa gaaaagtgac agtgtaaaag cgaaagccgt       960
     acacagtgat acgagaggaa ttgctttcgt tgtgaatggt gaaaatgctc gatcctggat      1020
     tattgacagt ggtgccagtg cgcacatgac gtgcgataaa tcgtttttca ccacattcga      1080
     agaatcttgc ggagggtaca ttaccctcgc tgacggtaag aaaacgcaga ttctcggtga      1140
     gggtgccggt gtgctccatg gcatagatgg tgacgatgaa gtgatcagga tcgacataag      1200
     tggtgtaaag tacgtcccgg gactgtcgac gaacctaatt tccgttgaga aactagctca      1260
     gaagaagctt gatgtgagtt ttaatagtga tggttgccgt attatcgatc cgaaggggaa      1320
     cgtcgttgca acaggagttc gttgcggcgg cctgtatcat ttgcggcagg cagagtcttc      1380
     gctgcaagct gcaggtgggc aacatcacga gaactgccaa cacttgtggc accgtcgcct      1440
     cggccaccgc gattgggcgg ctacggaacg catcaacaaa gaggagttag caacgggaat      1500
     gaaggtaggt gattgcggtc ttagacttgt atgtgagtgc tgccttgaag gcaaagcggc      1560
     tagagctccg tttccgagca ttgtcgaaag gaagtcgacc aggattctcg atatcatcca      1620
     cactgatctc tgtgggccca tgaaaaccac cacgccgagt gggaatagat tcgtcatgca      1680
     cctcattgac gattacagtc gtttcacagt aacttacctg ttgaaacaca agtcggaggc      1740
     ggcccaaaat attatcgact ttgtgaagtg gaccgagaat ctttttggtc ggaagccctc      1800
     tgtaatccga tctgacggtg gaggggagtt tgataataag cttttgcggg atttctatcg      1860
     tgctaacgga ataaagccac agttcacgac accctatact cctcaatcca acggtgtagc      1920
     ggagaggaaa aacaggtcca tcaccgaaat ggcaacctgt atgcttttgg actctggact      1980
     taataagcgc ttctggggcg aagctgtttt gaccgctacg tacatacaaa accgtatacc      2040
     gtctagatca gtacctaaga ctccatttga gatgtggtgg ggacgaaagc cggaccttgg      2100
     ccacctaagg gtgttcggca gtccagcgta cgttcatgtc cccgacgtga aacgcagcaa      2160
     gatggatccg aaagcgaagc ggctcatttt cgttggttac tcaattgagc ataaaggtta      2220
     taggtttgtg gacactgaga ctgattgcat caccatcagc agggacgccc gtttcattga      2280
     gcaagagaat ggaacgtcgt ccgttgagat tccagcttcg gagaacggga caagtaagaa      2340
     gcaagcgaat ggtgagatca atccgaatcc gttcaaggag gagaccgaca ccgaggagat      2400
     tagtgaagaa gaagagttta gcaccccacg tgctgaatca agtggagcct cgggtccagt      2460
     ccgtagatcg gcacgggaga accgaacaat tccgaaacat ctagaggact atctgttgga      2520
     gtacgccgta ggaatagcgg catgcgcggt tgaagaaccg gataatcatc tggaagctct      2580
     cgaaagtgcg gagtggcgca ctgcgatgaa ggacgagatg gactcgcatc agcggaacgg      2640
     tacatgggag ctaatacatc tgccgccagg acggaaaccc gtcggttcca aatggatttt      2700
     taaagtcaag cggaaccagg aagaacaagt agtgaagttc aaggcaaggg tcgtagcaca      2760
     aggatacagt cagaaggatg gcatagactt tgaccaagtt tttgcaccag tcacccggca      2820
     agctacactt cgtctgttcc tcactatcgc cgccaagcag aagctcatcg ttcagcacct      2880
     ggatattagg actgcatacc tcaacggtgt gctcgaggag gaggtttata tgcggcagcc      2940
     tcccggtttt acagtcaagg gtaaggagga gtacgtctgc cggcttagga ggagcattta      3000
     tgggctccgt cagtcagccc gctgctggca taagaaactg aatgaagttc tcaccaagta      3060
     tggattcaag tcatcggcgg ccgaccagtg cctgtatacg aagaatacgg atggagtgaa      3120
     agtgtttttg atagtccacg ttgatgacat tctagtggcg tcagcagaag aagcgaatgt      3180
     gaagagggaa ttcgaaaacc taggccgaga gttcgagttg acatgtctgg gcgaaatccg      3240
     tcattttttg ggagtggaag tcttacgtga agatggcgtg ttcaagatca ggctgaagca      3300
     gtttatcgat aagctgatta tcaagcacgg aatggagaat gcgaaaacta cgagatcacc      3360
     aatggacatc ggttttttga aagacggcgc aaacagtgaa ccgtttgagg acgttaccct      3420
     gtatcgaagc ttagtcggag gaatgctgta cttgtcagtg gttgcgagac cggatattgc      3480
     agccagtaca gcgatattgg gaaggaagtt ttcggagcca agtcaagccg attggaccgc      3540
     tgcaaagcga ttactacgct acctgaaagc aactcgtcac tattttcttc gattgggcgg      3600
     tgctgcagaa gatccactgg ttggatacag tgatgccgat tgggcaggtg atcccgtcag      3660
     ccggcgatca acatcgggat tcgtgttctt gttcgctggt ggtacagttt cgtgggctag      3720
     tcgccgccaa acttgcgtaa cgctctcttc catggaagca gagtatgtcg cgctagccga      3780
     agcgtgccaa gagaccatct ggttgaggca gcttcttcgc gacttcggag agcctcagtt      3840
     acagccaact acgatgaaag aagacaacca gggctgtatt gccttcatta aaacggagag      3900
     gtcaagcaag cgatccaagc acattaacac caaggaacgt tttgtgcaag aactgtgtga      3960
     gaagaacgaa attgtgctcg agtattgtcc tacggagata atgatagctg atgtaatgac      4020
     aaaaccgttg ggaccacaga aacatggaga tttcgtcgtg aaactgggac tggaggatcc      4080
     gcagtgaagc aggtaaccgc tgaggaggag                                       4110
//
ID   LYDIA_LTR repbase; DNA; INV; 300 BP.
CC   LYDIA_LTR DNA
XX
AC   AF177773;
XX
DT   30-MAY-2000 (Rel. 4.0, Created)
DT   30-MAY-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   LYDIA_LTR is a long terminal repeat from LYDIA, a gypsy-like
DE   endogenous retrovirus.
XX
KW   endogenous retrovirus; LTR retrotransposon; LYDIA; LYDIA_I; 
KW   LYDIA_LTR.
XX
OS   Lymantria dispar
CC   gypsy moth.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
OC   Ditrysia; Noctuoidea; Lymantriidae; Lymantria.
XX
RN   [1]
RP   1-300
RC   [1]  (bases 1 to 300)
RA   Pfeifer T.A., Ring M., Grigliatti T.A.;
RT   "Identification and analysis of Lydia, a LTR retrotransposon from
RT   Lymantria dispar";
RL   Unpublished
XX
RN   [2]
RP   1-300
RC   [2]  (bases 1 to 300)
RA   Pfeifer T.A., Ring M., Grigliatti T.A.;
RT   "Direct Submission";
RL   Submitted (16-AUG-1999) Zoology, University of British Columbia,
XX
DR   GENBANK; AF177773; 116.0.
CC   Positions       1     300  Accession No AF177773     GenBank (rel. 116.0)
XX
SQ   Sequence 300 BP; 83 A; 57 C; 52 G; 108 T; 0 other;
     tgttatatat taatagtcca ggcagaccgc ggattcagca gcagttaata tgcattcatt        60
     attgtactac atcagcaatt acgcaagcaa tgcttcgccg ccgccctgtc gccggaatca       120
     gagctgacgc tgcagttgtc accgattgca tttacgtagt ttcataataa aatcgttcat       180
     tccatattca tacttcgaat aggttagatt aattagatct atgtaatttt tatatttaat       240
     taaataagtt tatagtaatt ttggtttttt ttcgatcctt tggctgccgc taacgtaatt       300
//
ID   LYDIA_I   repbase; DNA; INV; 6054 BP.
CC   LYDIA_I DNA
XX
AC   AF177773;
XX
DT   30-MAY-2000 (Rel. 4.0, Created)
DT   30-MAY-2000 (Rel. 4.0, Last updated, Version 1)
XX
DE   LYDIA_I is an internal portion of LYDIA, a gypsy-like
DE   endogenous retrovirus.
XX
KW   endogenous retrovirus; LTR retrotransposon; LYDIA; LYDIA_LTR; LYDIA_I.
XX
OS   Lymantria dispar
CC   gypsy moth.
OC   Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
OC   Ditrysia; Noctuoidea; Lymantriidae; Lymantria.
XX
RN   [1]
RP   1-6054
RC   [1]  (bases 1 to 6054)
RA   Pfeifer T.A., Ring M., Grigliatti T.A.;
RT   "Identification and analysis of Lydia, a LTR retrotransposon from
RT   Lymantria dispar";
RL   Unpublished
XX
RN   [2]
RP   1-6054
RC   [2]  (bases 1 to 6054)
RA   Pfeifer T.A., Ring M., Grigliatti T.A.;
RT   "Direct Submission";
RL   Submitted (16-AUG-1999) Zoology, University of British Columbia,
XX
DR   GENBANK; AF177773; 116.0.
CC   Positions     301    6354  Accession No AF177773     GenBank (rel. 116.0)
XX
SQ   Sequence 6054 BP; 2085 A; 1394 C; 988 G; 1586 T; 1 other;
     ggcgcagtcg gtaggatcct cgcgggccgg ttcgcgtcct tagagtcctt tcaaatcgat        60
     attcgcgtcg cgagtcgccc gggtggcttt caagcaccgt catcgaggtt ccagaatcta       120
     cggtccagca gcagttccag aggagagtca agacctcgac tcacggaaga gaaaccagaa       180
     tgaagtatat gtaagtacac ttgaattgtt ctcgtgttgc ttgctttctt tgtcctagtt       240
     atatccattc tccaaaattt tccatcgcga aaattcgtac cgggaacctg catctcggca       300
     ggctcgttgg aatacaatag atttaattag aaatttaggt agtagccctc cgcagagttc       360
     agaaaatatg gcttaaggac aggctaacgt agtagtaata acccatgacc cggacacgat       420
     ttttaaggta cttcgcctag tcccggattt cgatgggaac ccgaatattt taactagatt       480
     gattaatata tgcgatagaa tagttgtaca atatttaagt gatcagccag gaaacgaatt       540
     agcgaactta tgtcttttaa acggaatact aaataaaatt acgggatcag ccgctagcac       600
     tattaattcc aacggtattc cagacagctg gttaggtatt agaacagcct taataaataa       660
     cttttccgat cagcgtgacg aaactgctct ctatagtgac ctatctttag ccaaacaggg       720
     tacgaagaca cctcaagagt tttacgacca gtgccagaca ctattcagta ccataatgac       780
     ctatgtaact ttgcatgaac cgattagtac cacagtagaa gctaagagaa tattatataa       840
     aaaaattgct atgcagtcat tcgtgagagg cttacaacga accattagga tcgcggataa       900
     gatgtatgcg accagagact atagaaaaag cactcgaata tgttcaagag gagttgaatg       960
     taatatattt acaacaacgt aacgataccc cgaaatcggt taacacccct agaacgttca      1020
     actatgttcc accccctata aatttcaaca aaccacgtgt tcaaaacatc gttagtcatc      1080
     cccctaattg gccggcacca gtaggtttta aatcacacca acttccgccg caacccttta      1140
     aattcaaccc cctacagaac caacagttcc agcaacgtat ccctaaccgt acgcagcaaa      1200
     tatttcgcgc tcaaccaccc ggttataacc cacatagtaa cgtctttcga ctaccaccca      1260
     ggaacgttcc accacaaaat ctaggcccaa aacccatgag cggcatacag cattttacac      1320
     ctaagcctat attatcaggt catgattggc gtaaatcagg caatccacca ccaagtaatt      1380
     atttcaaacc gcgtgaaatg aacgtgaatg agtgcgcgta atacgacgac tcatattacc      1440
     cagagtattg ttacgaacac gaagatagct atttttacag taattattac aacgattaca      1500
     tcccatacgc tacagaagag tgcacctata atactactta ttatgatacg acaaatgata      1560
     ttcagattac cgaagatata gaaccacaac ctggtacaag ttcatcagac ccggattttc      1620
     agttggaccc ggtgtcaaaa agaccaaaat agaattaaat ctccaaactc agagacagct      1680
     accatatatt tctatttcag atccaccttt aaaattatta attgacacag gtgcaaacca      1740
     atcgtttatt agcccggaag cagtcgagtt atattttcca aactttccac taaattacga      1800
     tccatttgaa gtcaccgatg tgcacgccgt tagtagaaac gattactcca ttaccttacc      1860
     caggtttgct gaatttaacg accctaaccc ggttaaatta ttcgtatacc gttttcatga      1920
     ctatttcgac ggattgatag gattagatct attaaccaga tgggaggcca aaatagactt      1980
     aaaagaccgc aaattaatta cacaattcgc ctcgaaccca atacgcatgt acaattcttg      2040
     taatgtcaac ctatgcgagg acatcatacc accaaaatcg ccaaaattaa ttaaaattcc      2100
     cattaacacc cccgacggcg cagcattagt tagcgaacaa actatatgca attgcattat      2160
     tcacgaatgc cttactaacg taaaaaacaa tcgcggttac attgaaatag aaaactctac      2220
     acccaacgat ataatattgt ctctcgaccg acctgcacat gcagaattat ttaataccga      2280
     gtacactcgc accgaanaac cacactcacg cgtatcagaa gttatatcgc gtttgcgcac      2340
     cgaacaatta ggccccgaag aaaaagcgaa ccttaccacc ttatgttcta gctatgcgga      2400
     cgttttttac attgaaggag aaacacttac ttttacaaat aaaatcaaac atcgtataag      2460
     aacaaccgat gaagtccctg tttacacaaa aagctatcga taccccgttt atacaccgac      2520
     aagaagttag tgaccaaatt tcgaaaatgc ttaaccaagg tataataaga ccatcagact      2580
     cggcatggag ctcaccaatt tgggtcgtcc caaagaaaat ggacgcgtct ggtaagcaaa      2640
     aatggcgtct agttgtcgac tttcggaaac tcaacgacaa aactatagat gataaatatc      2700
     ccatccataa tattagtgac caacttgaca aattaggtcg ttgccaatat tttacaaccc      2760
     tttatttagc cagtggtttt taccaagtgg aaattgaccc cctcgatatt tcgaaaaccg      2820
     catttaacgt cgaacatggt catttcgaat ttcttcgaat gcccatggga cttaaaaact      2880
     cgccttccac ttttcagcga gttatggaca atgttctcgg agacctccag aataacatct      2940
     gcctaatcta tcttgatgga atagtagtct tcagcacttc tctccaagag cacatggtca      3000
     acctcgagga aggtattcca aagacttcga gagtctaatt tcaaaataca aatggacaag      3060
     tcagcatttc ttaagcttga aactgcttat ctcggacata tcatcagtgg agatggagta      3120
     aaacccaatc ccgacaaaat ttcggctatt gaaaattatc ctattcccaa aactcctaaa      3180
     gaaattaaac aatttttagg tcttattggc tattatcgaa aattcatacc agattttggt      3240
     aatttaacta agccacttac acagtgctta aagaaaggta aaacgattac gttggacccc      3300
     cagtacatta gttgtttcga gaaatgtaaa acactcttaa gtaatgatcc tattcttcaa      3360
     tatcctgaca tcgaaaaaga cttcagcctg acgaccgacg cttcaaacgt cgctattgga      3420
     gccgtgctat cccaaggacc aattggatct gataaacccg tatgttacgc ctcgcgaaca      3480
     ttaaacgata gtgaacttaa ctatagcacc atagaaaagg aacttctagc catagtttgg      3540
     gctactaagt attttcgccc atatctgttt ggacgaaaat ttaagataat aaccgaccat      3600
     aaaccactgc agtggatggt aaaccttaaa gaacctaatt caagattaac tagatggcgt      3660
     ttaaaactta gcgaatacga tttcaccgtg gtatataaaa aaggcagaca taacaccaac      3720
     gccgacgcct tatctcgtat agaaatccac aacgaagatc taaatagtat agtcgacgaa      3780
     ttatgttctc tcataccgaa ccccactgat gaaccgccca ctattgtaaa ctcttcaacc      3840
     gaaaccgcac acactagttt agaacatcct atattagaaa ttccaatcac cgatgaaccc      3900
     cttaataaat actataggca aattcatttc accatcgtaa atgacgtcaa aagaaaaccg      3960
     cacgtaacaa aacctttcga aactcacacg cgcatagcca ttcagctctc aaaatcaaac      4020
     ttagaaaacg acatcattaa tgcgattaaa gagtatgtta gtcctaaagt aaaaaccgcc      4080
     cttttaataa ctccacctct tgccatgtat tctattatcc ctgtaattca aaaaacgttc      4140
     agaagttctt cactaaacct cgtacttaca aaactagaaa tagaaaacat caaggattac      4200
     cttcgtcaac aggaaatcat tcgcaactat catgatggaa agacgaatca ccgtggaatc      4260
     acagaatgtt atctatctct atcacgaaaa tactattggc ccaaaatgaa agaccagatt      4320
     acaaaataca tcaatgaatg tattatctgc ggccaagcga aatacgacag gaaccctatc      4380
     aaacctcaat ttaacatcgt accacctgca acaaaaccac tcgaggtagt tcacatggac      4440
     ttattcactg tacacaacga aaaatatatc accttcgtag atgtattcac aaaatatgga      4500
     caggcgtacc atctcaatga tggcacagct gtaagcatat tacaagctct tcttaaattc      4560
     tgtacccatc acggagtacc attaactcta ataacggata acggaaccga atttacgaac      4620
     caactctttt cagaatttac gcggcttcac aaaataaacc atcaccgtat tttacctcac      4680
     cgaacgataa tgggaacata gaacgctttc attccacaat acttgaacat cttcgaattt      4740
     taaaattaca aaataaagat gaacctatag tctatctaat accatatgct ataatagctt      4800
     ataacagttc tatccacagt ttcacaaaat gtaggccgtt tgacttatta aatggacatt      4860
     ttgaccctag agatatatta gatatagatt ttacacatca tttactacaa caatatagcc      4920
     aaaatcataa ggcccagatg aacgaagttt ataaaattat aaacgattca tctttaacta      4980
     atagaaccgc tctcatagaa caaagaaata taaatcgtga gcccgaaata gaatacactc      5040
     cccaacagca agtcttcatt aaaaatccgt ttgctaacag tcaaaaagtt gcaccacgat      5100
     ttactcaaga caccgtctta gcagatttgc caatacacat ttacacctca aaaaaacgtg      5160
     gtcctgtagc caagtctaga ctgaaaagag gtcataaagt tccccaatcg ttaaatgatt      5220
     ctactgttac tgacccttcg cgagacaacg cttctcgaga caaatctttt agttatactt      5280
     agtaataaat aagtttagaa ataactagaa tagaaaatgg ttttactcat acatcgagta      5340
     tgcaccactc tagtatagat atcaatatgt tagaattaat gttaggtaag ctagaactca      5400
     tttataacct agatgagata ttaagagtag aattaaaata gtactacgaa gcaatcatcc      5460
     ccagtttaca cttctctgat aaattcatag taatggtttt taaattccct gtatttttaa      5520
     tatatccaga atagctataa cacccgacag gcctttctac cttcctatcc ttacattgca      5580
     atcaacacag gtacattcaa gctgtacatg gaggctgaat gcccgaaggt tgggagttgg      5640
     tatctctgta agaaacttcg catcagatac gcgtcagccc aaactacatc ccacagctca      5700
     ttataaaaca agctttgctc ataactcctg ccagaaccgt ctcatcagct actgaagccc      5760
     tggaataatt agacgaccgg cattatgccg tatcttttcc acattccacc aaactaatgg      5820
     acataccaag taacactgaa aaacaagtat cgttgtacca agacacgtag tcttgactca      5880
     acagatcacc gaagtctgca cagcatccag aacaaagtct gtacagcatc ctttcatcaa      5940
     aaggataacc acatgaccca catggaaata gcaaagaatc aggaagcccc agataatatt      6000
     ccagtgacat tttcactcaa cgttcgaaaa tggtcgcaga tctacgaggg gagg            6054
//
