>B1|B1  Mouse B1 repetitive sequence - a consensus.
gccgggcatggtggcgcacgcctttaatcccagcacttgggaggcagaggcaggcggatttctgagttcg
aggccagcctggtctacanagtgagttccaggacagccagggctacacagagaaaccctgtctcg
>B2|B2  Mouse B2 repetitive sequence - a consensus.
gggctggagagatggctcagtggttaagagcacctgactgctcttccagaggtcctgagttcaattccca
gcaaccacatggtggctcacaaccatctgtaatgagatctgatgccctcttctggtgtgtctgaagacag
ctacagtgtacttacatataataaataaataaataaataaatcttaaaaaaaaaaaaaagaaagaaaaa
>BC1|BC1  BC1 (identifier) repetitive sequence - a consensus.
ggggttggggatttagccagtggtagagcgcttgcctagcaagcgcaaggccctgggttcggtcctcagc
tcttgg
>BGLII|BGLII  Mouse Bgl II repeat fragment (clone 51B).
tgttagggatacttggggctaattatatttgatgttaattctgttctcctgtgagtggtagtgaacaagg
aatgagtcagcacccaggtgattccctgtaaacctgcttcccaccttaatttgtaaaataaaggagagct
gatgattgggcagataaaaggtaaggtggagtggagggtgggggatgaaggagaaagtggaagaggaaga
gaatgcagaggaggaggaagacaaagaaaagcagagcagaagcacttggccaggagaaactgcaagttct
aaggggtctcataagctgtggaagatggtaatgtagcgatagatct
>L1_CC|L1_CC  Guinea-pig LINE repeat sequence.
aagctttttaacaagatgagcttccagttgttgattttttgtgaacgtttctatgcaacagaagttttgt
tcatgaagtcttttgcctataccaatgtcttcaagagttctacctagtctatcttccagcaggtttaaca
tttctgttttaatacttaggttttgattcatttcaattttagtttagagtgtggtgaaagatgtgggtat
aattttaatcttcagcatgtggaaagccaatttttccagcaccatttactaaagaggcttttttccagca
aaggtgtttggcttttttgtaaaaaataaaggggctgagtgtgttggagttgtctctgtatcttctaacc
tgttccactattccttgggtctgtttttttgccagtaccatgctgtttttatcacagtagctttatggta
taatttcaagtcagggtgggtgatgcccccttcttggtctttgttgcccataatttcctgtactattata
ggtctcttctggttccaaatgaattttataatttctctaattctgcaagatatgctcttggaattttaat
cagaattgcattaaatctgtataatgattttgaaagcatggccattttcactattggttcttcctactca
agagcaagggatttcttcccattttctgatatcctattcaatctcctta
>L1_CP|L1_CP  Conilurus penicillatus (LxCPx2) LINE 1 repeat element, 3' UTR.
ggggatccatcccatatgctgacaccgagcccagtcactattgctgatgccaagaactgctcgctgacag
gagcctgataaagctgtctcctgagaggctctgccagagcctgacaaatacagatgcaaatgcatgccac
caaacgtcagactgagcacaggtccacattggaggagtttagggaaggactgaaggagctgaag
>ISAT_RN|ISAT_RN  Rat satellite I repetitive sequence.
tggtgatttcggttagttccaaataggccgcagtagtaataagtggactgtcgggatatagaaaaatttt
acgaatggaatcaaaatttctaggcgaattcagtgagttcccaatggacatgcttgtattagtgtgcttt
tagatatatagcaacattttaaggaacggaatctaagtatcatggtgaattcagtagtttcgcaatagga
ttagcatgtaataagcttgttattcaagataaagcaacgtttttacgaatgaaacaatgtatctttgtga
attcagttagttccaagtagcaggcccttttaatatgtgtacttttaaagatttatcaaaatatggtgag
ccgaatctgatgaacatggtgaattcggttagattccaataggcc
>LTRIS|LTRIS  Mouse LTR-IS sequence.
tgaaagatcctggcataatgtaaaaggacacagaagccctgaaattggcaagatagatgtcagtgttagc
agaactagcttcactgatttagaaaaatagaggtgcacaatgctctggccactccttgaacctgtgtgtc
tgccaatgttctgaccaggtgtgtgcccattgctgcaccttcattagactctttccttgtacccctccca
tacccatttcttgagaatagacattgtttagatctggaaatctcctactctcccccttctcctttccccc
ctgagggcctataaaaactgggaactctttcccctcgaggacgactcctctacccctgcgtgggatatga
gtcgtacccagagctctggctttccccgaataaagcctcatgtggtttgcaacaagctcggtctgtcatg
agttcttgggtgtccgctactgtcatgagttcttgggtgtccgctactgtcctgaggcctgagcgagggg
ctcctctcggagtctttca
>RLTR3IAP_MA|RLTR3IAP_MA  Syrian hamster intracisternal A particle (IAP) LTR.
tgtgaggagccgccctcgctatcgctattgccgttagaagatggcgctgacatccactgtcagttggagt
taactgtcgctgtcagttggagttaactgtcgctgtcagttggagttaactgtcgctgtcagttggagtt
aaccgtttaaactgtgcctctcccgtgacgtcatctggggtgatgtgcaaaccaccaatcccggctctac
acatctcactcggagctcctaggcttatataaggggctgggtttcttagcttggggtctccctctaagaa
gctgatcatctatgtctcaagatgcattaaagctttactgcagaaggatccgagtgttctgcgtcgttct
tgctggcgagacggtagcgcgggaca
>RLTRSRC_MA|RLTRSRC_MA  Hamster proviral LTR encoding pp60v-src protein.
tgtagtcttatgcaatactcctgtagtcttgcaacatgcttatgtaacgatgagttagcaatatgcctta
caaggaaagaaaaggcaccgtgcatgccgattggtggtagtaaggtggtacgatcgtgccttattaggaa
ggtatcagacgggtctaacatggattggacgaaccactgaattccgcatcgcagagatattgtatttaag
tgcctagctcgatacaataaacgccattttaccattcaccacattggtgtgcacctgggttgatggccgg
accgtcgattccctaacgattgcgaacacctgaatgaagcagaaggcttcatt
>MREP_MC|MREP_MC  Murine middle repetitive DNA.
gaattccaaggtaaatgctgatacacaatgccatattgaggtaagtgttgttatctgacactggatagaa
aattgatgtctgagatcctacccaccacaggaagttctgttgatgtccctgatgcattcatgtagctcct
gttgtgaaacatgtatggtattttcattattatgattctacctgtaaaaaaaaaaagaaaactatgttga
tgccagtgatgtatgctgtgatcagcaattttgatggagtccaagtttgattttattcctattgctaatg
gaaacctagtggtggctatgatctgtgctactgcttgaaaatataatgaacctcaaggtccacaataatg
cccaagtttattttgagggaagtattcttatctggttctggagatcagattaaaatctggaaacctacct
gccacaggatcatcagttggtatttctcatgtatgtgtatagctcacaatatctaacatgtgataaatat
tgataattgtgatcctgctggaaacctgaagctattttgaagtcagtgatgcagctatgaccagcaatca
tggtggggtcttttatccctgttgctaattgagaccctggtgatggctatgatctgtgttgtttcttgag
aacctgatgaattc
>MIR|MIR  mammalian-wide interspersed repeat (MIR) - a consensus
acagyayagcatagtggttaagagcacggrctctggagccagactgcctgggttcgaatcccggctctgc
cacttactagctgtgtgaccttgggcaagttacttaacctctctgtgcctcagtttcctcatctgtaaaa
tggggataataatagtacctacctcatagggttgttgtgaggattaaatgagttaatayatgtaaagcgc
ttagaacagtgcctggcacatagtaagcgctcaataaatgttrgytattatt
>C573|C573  Mus musculus (clone C573) chromosome Y DNA repeat region.
gaattctgtggttaaattgttttgaaatgtcagtcatgggtcttagatgaaggctttggtccacagtaca
atgttcataggtagtacaatatgcactctgaaaagtgattggaacctgagggctttaatcaatgagttaa
tcaaccaatggatatacaaggaatgggtaagaaacttgtaaatgaacgcggtcatttggacatgtcttca
aagctgtttattgtctttggtcccttcttgtgttaatgctgactagctgccaataatttgaacaattgtg
ctgcttcatgcccctttcatattcatgtgatcatggatccttctttcatttgtgatagtaacatgtcagg
ttcagaggaaacattgcttaattctttaatttttttttctagaaacggcatgctaagtgtagaaccaatg
ttacctagttgttgtagttggaatattcagccatggtatctgttgtctttgagactcaagaactttgctg
ctacccacaccactggtctttcttctgaattc
>RLTR1_MM|RLTR1_MM  Mouse long terminal repeat.
tgagagaaagatgaaattttaggacctacaattcatgtaaaatataccagaaagttgtttgtgagcctaa
gaggctgcctgagactgagaacaaagaggaacaggcccaggcatgtcctagcaggccggtcgttaaggta
ttcctaagaacagctaaagatcataagataaaagatcctaagatcataaagataaaaaaagagtgcaagg
acagaacaaggctatctcagcttagtcaataccatctggcccagcacctccctctgcccactgaccttct
gactcagttcagagtcatatattaaccagatgttccaagcacccagccctcagacttcctgataccccga
tctatacgtacacttttactagtgtataactattctgttgaagtttaaattgtccaattgtgtgaaacca
caccaattccttccccagccccagacccttttctataaaaacccctagctttcaagcctcgaggccgact
accgctgtcccctatgggagatatgtataggcccggagctccgtcattaaactacctcacgtgtttgcat
caagacggtctctcgtgattctttgggtgcacgccgaatcgggaatgggggtttccccactaggctcttt
ca
>RLTRETN_MM|RLTRETN_MM  Mouse LTR (E.Tn sequence).
tgtagtctcccctcccctagcctgaaacctgcttgctcaggggtggagcttcctgctcattcgttctgcc
acgcccactgctggaacctgcggagccacacacgtgcacctttctactggaccagagattattcggcggg
aatcgggtcccctcccccttccttcataactagtgtcgcaacaataaaatttgagccttgatcagagtaa
ctgtcttggctacattcttttctctcgccacctagcccctcttctcttccaggtttccaaaatcgctttc
caggctagaacccaggttgtggtctgctggccagacacaaca
>GSAT_MM|GSAT_MM  Mouse gamma-satellite repetitive sequence.
gacctgtaatatggcgagaaaacagaaaatcacggaaaatgagaaatacacactttaggacgtgaaatat
ggcgaggaaaactgaaaaaggtggaaaatttagaaatgtccactgtaggacgtggaatatggcaagaaaa
ctgaaaatcatggaaaatgataaacatccacttgacgacttgaaaaatgacgaaatcactaaaagacgtc
aaaaatgagaaatgcacactgaaagacctggaatatggcgagaaaacttaaaatcacggaacatgagaaa
tacacactttaggacgtgaaatatggcaaggaaaactgaaaaaggtggaaaatttagaaatgtccactgt
aggacgtggaatatggcaagaaaactgaaaatcatggaaaatgagaaaaatccacttgacgacttgaaaa
atgacgaaatcactaaaagacgtgaaaaatgtgaaatgcacactgaaggac
>RLTR1IAP_MM|RLTR1IAP_MM  Mouse intracisternal IAP 3' LTR.
tgttgggagccgcgcccacattcgccgttacaagatggcgctgacatcctgtgttctaagtggtaaacaa
ataatctgcgcatgtgccaagggtatcttatgactacttgtgctctgccttccccgtgacgtcaactcgg
ccgatgggctgcagccaatcaaggagtgacacgtccgaggcgaaggagaatgctccttaagagggacggg
gttttcgtttttctctctctcttgcttctctctcttgcttcttgctctcttttcctgaagatgtaagaat
aaagctttgccgcagaagattctggtctgtggtgttcttcctggccggtcgtgagaacgcgtcgaataac
a
>IAPA_MM|IAPA_MM  Repeat associated with intracisternal A particle.
attggtgccgaattccgggacgagaaaatccgggacgagaaaaaactccggactggcgcaggagggatac
ctcattccagaaccagaactgcgaatcaaggttataaggttcccgtaacacagactgttgagaaggattc
aactgccgaattcagaactcatcagctggggaacgacggtgataaaggttcccgtaaagcagactgttaa
gaaggattcaactgtatgaattcagaacttttcagctggggaacgaggtaagtctgatcttgaactttct
aaggaaattcaagacagtctatcagaagtaaagtggaaaatggctttacaagtt
>RLTR2IAP_MM|RLTR2IAP_MM  Mouse intracisternal A particle (IAP) long LTR.
tgttgggagccgcccccacattcgccgtcacaagatggcgctgacatcctgtgttctaagtggtaaacaa
ataatctgcgcatgtgccaagggtatttctctaccccatgtactctgccttccccgtggcaacaactcgg
tcatggctgcagncaatcagggagtgatgcgtcctaggcgaaggatgattctccttaaaaggggacgggg
tttccgccattctctctcttgcctgcgctcttgcgcttttgctctctggctctggctcttgcttctggct
cctaaagatgtaaacaatagagctcgtgctctgcgctctggcgcctggcggcctggcgcctggctcctaa
agatgtaagcggggggggctttcgtttttggggcttggggcttgcgctcctggcccctgaagatgtaagc
aataaagttttgccgcagaagattctggtttgttgtgttcttcctggccggtcgtgagaacgcggagtaa
ga
>L1_MM|L1_MM  Mouse L1 repetitive sequence.
[encoded data, 6461 characters]
tggaaaaaaaaaaaaaacctacctctag
>RLTR2_MM|RLTR2_MM  Mouse endogenous retroviral DNA, 3' LTR of lambda-13.
ctgcagcaatcaggagtgaacgtccgggcgaagagatgctcctaagagggacgggcgtctctctctgctt
ctccctctctgcttcttgctctctgcttcttgctctctgcttcttacacgctgctcctaagatcgtcaag
acacactaaagctt
>PER_MM|PER_MM  Mouse period repetitive DNA (lambda Sp28).
caggggtgtcaggcacagggttgtcaggcataggggtgtcaggcacaggggtgtcagcagggtctctggg
gc
>SQR1_MM|SQR1_MM  Mouse simple repetitive DNA (sqr family).
tatatatatatatattattctaacattatatattaacatcactaatatacccttcagcttttgttttgag
ccatccagtacacatgactctataaaaaatagcctctcagaaatccacttcaaatatacccctggcactc
tgagttagatcttgcattaccccagcaccgtgtaagcttctgaaatccagcggggtctctcaccctctcc
tcttgggaaatgttcgattagttgagctcactgtttccttcctcagtttttttctctgaatctttgctgt
gcctctggctttcttgtgcttctggaggggcactggtctacttacaagaggccattgtagctagagtaaa
agataaaagagatctgagccggcttctgtagagctgaaccacagacagacagacagacagacagaccatc
cctcacaaacaccaaagcctaagtttcaaatcagctcagttcttcacaaggtatgagccatgttacttca
cctgcctgccaggagcataatcatttcttggggaaaaaaaatctacagattctcaaaacacctgcacatc
caatgcccagcattgattaagatgtccaggcatgacagcaggtatgccaggatgcattccttcaacttga
tggttcattagttcagggattaaggcttggctcaggcttgtggtcagtcccaacata
>SQR2_MM|SQR2_MM  Mouse simple repetitive DNA (sqr family).
tctaaacatggaaggactgctgttttcatcttcacccttactcagatgtggggctagtgacatggcgcaa
tggttaaagcatataccactaggccctgacaacctaagtttgacccttgggactcatgtgatggaaaaag
agaataaaatcctacaagttttcctctgacctcctcatgcatagctgtgtgtgcacgcatgagagagaga
gaaagaagagagggacacagacagacagataaacacagagagggagagaaagagaaagacagacaggcag
agacacagagacagagaaacagacacagagaaagagagacaggcaggcagacagacacagataaactgtg
acagacagacagacagacagacagagacaaagaaagggaataatctttaaaaatgaaaacaatttgcctt
tgatgaagcaagcgcatttcgtgctgggtttctggcttaagcatcgctttagttcatgtctggaataagt
ctgctggctcttcatttctacatttgtgaggaggtaatcaaatgtgcttcctttgaatcaaacactcaag
aactattcaagtcacattgattaatacaatgaagtgtaagtacaaggctagctggcttcgagaatcctat
cg
>SQR4_MM|SQR4_MM  Mouse simple repetitive DNA (sqr family).
ttttttgctacattcatatatagaagtgtactgaaattgaagtaagtttttctacaccattaaactacaa
tttgccccgttctttcagcatcttgaatcctgggtcttgaagacacagttctgaataggccatcaaaagt
tgataccatgctcataattgttttattgataacaactgttttgcctaggctagcagtcaatccggatcat
acttatctgtttcatacttaacagtggaatagccagtgttttctgcttcaggaacagcaagctctaaggg
cttatactggtaaaataaataaatagatagatagatagatagatagatagatagatagatagatagatag
atagatagataaagtcttgactgttacatgatgatatcttgggaggcctggtagcatatatccataatcc
cagcactca
>CYRA11_MM|CYRA11_MM  Mus musculus (clone A11) chromosome Y DNA sequence, repeat region.
gaattctgaacatgttctcacatagggcatttgaatatactttttaggttaaccccatatgatcacaaga
aacaaaatgtagcaagaagatcagagtcagaagtatatctcagactcatgtcaaagacagtctgggaggc
acaccatgcttcggttttcaaagttccagagagtggttctccacctttttaatgctgcagttccttcata
tatatacttccttatgctgtgtggtgcaccaactgtaaaaatattttttgctgcttcataactgaaatgt
cctactgatatgaattgtaacatacatttctgacatacagatagtcttagacaactcctgtgaaatttgt
cacaaggactagcaacctacaggttgccaaccacagtgccagcaactgggaaaactagccagccccttga
tttttacaatgttgacttccgtaactatagtagaatagatgtgctctattttagtggtctaagcatgtga
ggatctgtaacactacctggaaacacacataccaaattggatgagggagtctattttttctgtcctggac
cttgcaggtttgagtcagctctaatcaaatagaagagaaaggatactagatgaattc
>ZP3AR_MM|ZP3AR_MM  Repetitive segment of ZP3 gene.
agagcacctgcctagagtacccctgtaaagcgcttgggggcatggctcagtggtagagtccctgcctaga
atcccccagggaggggttggggggctggctcaggggtagagcccctgcctagaatcctccagtgaggggc
tgggggcgtggctcaggggtagagcccctgcctagaatcctccagtgaggggctggggcatggctcaggg
gtagagccccctgcctagaatcccccattgaggggctggaggcgtggctcagtagcagagcccctgccta
aaatgccccagggagggggtgggtgcctcactagagcact
>RLTRMRS_PS|RLTRMRS_PS  Dwarf hamster retrovirus MRS-Ps LTR.
tgcacactagcccatgtggagacagtgtagaactgctgagagaatctcaatggctatctgtcagaggttc
gacacatgtggttacgctctgggaaaatggttcaggtccctgcagctgcttgcatggctggctgtttgga
atgggtgctagatgtgttttgtgctatgataacaatattgccttttattcaaggatattttattcaagga
tattttagcctgtaagctcactagtaattcagagatgcctagagagcacttagatatagtttcaggaact
gaaagagatacagatcagcagtcaataggtgggtattgccctctgtgccttcagacacagatcctaaggt
gccagttgtgacttcagatgtcagccagggcctgataaatcaattagggctaaggctataggaagcagcc
cacaatgagaccctgcctgtaattaacccgcccacaacaaacatgctgtgggattcacaacaatactcta
atttgggatcttagggcccctaaatcaacactataaaagtttactatctagagacaagattagcctctaa
actcaataaatcaaatctctgatatgctgaccacaagcaggccaaaataaacagaggttcctaatatgca
cttgctgagaaacttcaaagggaattgttaacatctgtagaatcctgtttatctttaaactgtgaccaaa
gatctgttctttgagctttctgtataaaaacccagtactttgaagtaaactttgcagcagttcgcaaacc
tcctcaggtgtgtttgtgtctgtctgtcaagccgaagccattcctgacctggtcatctgagtcttggtct
ccacacagacctgcaacccactgagcagtctgtggcagctggtgcccaaaacagggac
>MTA|MTA  Rodent MTa MaLR-LTR - a consensus.
tgtactggctagttttgtgtcaacttgacacaagctggagttatcacagagaaaggagcttcagttgagg
aaatgcctccatgagatccaactgtaaggcattttctcaattagtgatcaagggggaaaggccccttgtg
ggtggtaccatctctgggctggtagtcttgggttctataagaaagcaggctgagcaagccaggggaggca
agccagtaaagaacatccctccatggcctctgcatcagctcctgcttcctgacctgcttgagttccagtc
ctgacttcctttggtgatgaacagcagtatggaagtgtaagccgaataaaccctttcctccccaacttgc
ttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagaca
>MTB|MTB  Rodent MTb MaLR-LTR - a consensus.
tgtactggctagttttgtgtgtcaacttgacacaagctggagttatcacagagaaaggagcctcccttga
ggaaatgcctccatgagatccagctgtaaggcattttctcaattagtgatcaagggggragggcccagcc
cattgtgggtggtgccatccctgggctggtagtcttgggttctataagaaagcaggctgagcaagccaag
ggaagcaagccagtaaryarcayccctccatggcctctgcatcagctcctgcctccaagttcctgncctr
cttgagttccagtcctgacttcctttggtgatgaacagcaatgtggaagtgtaagctgaataaacccttt
cctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagaca
>MTC|MTC  Rodent MTc MaLR-LTR - a consensus.
tgtgctggctagttttatgtcaacttgacacaagctagagtcatytgagargagrgaacctcaattgaga
aaatgcctccataagattggcctgtaggcaagcctrtaggrcattttcttaattagtgattgatggggga
gggcccagcccattgtgggtggtgccayccctgggctggtggtcctgggttctataagaaagcaggctga
gcaagccatgaggagcaagccagtaagcagcactcctccatggcctctgcatcagttcctgcctccaggt
tcctgccctgcttgagttcctgtcctgacttccttcgatgatgaactgtgatgtggaagtgtaagccaaa
taaaccctttcctccccaagttgctttggtcatggtgtttcatcacagcaaatgtaaccctracyaagac
a
>MTD|MTD  Rodent MTd MaLR-LTR - a consensus.
tgtgctggctagttttatgtcaacttgacacaagctagagtyatctgggaagagggaacctcaattgaga
aaatgcctccatcagattrgcctgtgggcaagtctanaggacattttcttrattgatgattgatrtggaa
gggcccagcccactgtgggtggtgccayycctgggcaggtgrtcctggrtggtataagaaagcaggctga
gcaagccatgaggagcaagccagtaagcagcgttcctccatggtctctgcttcagttcctgccttaggtt
cctgcctcgagttcctgccctgacttccttcartgatggactgtaacgtggaactgtaagccgaaataaa
ccctttcctccccaagttgcttttggtcatggtgtttcatcacagcaacagaaaccctaactaagaca
>RLTR3_MM|RLTR3_MM  Mouse mammary tumor virus LTR.
aatccaataggtagattattaattactatgttaagaaatgaatcattatcttttagtactatttttactc
aaattcagaagttagaaatgggaatagaaaatagaaagagacgctcagcctcagttgaagaacaggtgca
agagctaacggccgcaggcctagaagtaaaaaagggaaagaagagtgtgcttgtcaaaataggagacagg
tggtggcaaccagggacttataggggaccttacatctacagacggttagcttggcttcccagggttcaaa
ctgttcttaaaacaaggatgtgagacaagtgcgcaacggttagcttggcttcccagggttcaaactgttc
ttaaaacaaggatgtgagacaagtggtttcctgagttggtttggtatcaaatgttctaatctgagctctt
agtgttctattttcctatgttcttttggaatctatccaagtcttatgtaaatgcttatgtaaaccatgat
ataaaagagtgctgatttttttgagtaaacttgcaac
>RLTR4_MM|RLTR4_MM  Murine leukemia virus (MuLV) LTR.
tgaaagaccccaccataaggcttagcaagctagctgcagtaacgccattttgcaaggcatgaaaaagtac
cagagctgagttctcaaaagttacaaggaagttcagttatagattaacagttaaagatcaaggctgaata
gcactgggacaggggccgagcaggatatcggtggtcaagcacctgggccccggctcagggccaaagaaca
gatggttctcagataaagcggaaccagcaacagacacagaagccccgatagacgtcagtgttagcagaac
tagcttcactgattttaaaaaatagaggtgcacagtgctctggtcactccttaaacctgtgtgtctgcca
atgttctgaccagatatgtgcccattgctgaaccttcattagactctttcctcgtacccctcccctaccc
atttcttgaaaatagacattgtttagatctaaaaagtcccacctcagtttccccaaatgaccgggaaata
ccccaaaccttattcaaactaaccaaccagctcgcttctcgcttctgtaaccgcgctttttgctccccag
ccctagccctataaaaagggtaaaaaccccacactcggcgcgccagtcctccgatagactgagtcgcccg
ggtacccgtattcccaataaagcctcttgctgtttacatccgaatcgtggactcgctgatccttgggagg
gtctcctcagattgattgactgcccacctggggggtctttca
>RLTR5_MM|RLTR5_MM  Mouse endogenous retrovirus (MuRVY) LTR.
tgaacagcaaaaacttataattttgggtcttatagcattgtggtatgtaagttcaagaaattcagggctg
aagaatagacccaggcgggtccaggcacagccatactcaccctgtagctaagaatgtccggccataaaag
attaaaaagagaatgcaggaactagccactgctaacagggcggaccaaatggccatctggcaggatggca
cctccctatagaccccataaatcatacattgaccaggtgtcctgctgacctcgagaagtcccaagccctt
gtgtctttctccattttagcaggtacatattaccctgctaatttgtaatcatcctgccgccatttaaata
agccaattatgtgtaatggcgcaaattcttttggctcccctgtttttggtttgtggtttttgcctttata
agcctgtaaaaagtttgggctggggttgaactcccctgccccctgcgcggtgcatgagtttcggtcctca
gcattctggcttgagcgaacctttgttgtttgtgtgtttgtacgccattaaagccttgtataattacagt
gagttctggtctcagtgtcctactgggtgcgcgcttgcccgaaaagggactccccacggggtctttca
>ORR1A|ORR1A  Rodent ORR1a MaLR-LTR - a consensus.
tgtgrtggtttgwatatgcttggcccagggagtggcactattaggaggtgtggccttgttggaggargtg
tgtcactgtgggtgtgggctttgagaccctcctcctagctgcctggaagycagtcttctnctagctgcct
tcggatgaagatgtagaactctcagctcctcctgcaccatgtctgcctggatactgccatgctcccgcct
tgatgataatggactgaacctctgaacctgtaagccagccccaattaaatgttgtcctttataagagttg
ccttggtcatggtgtctgttcacagcagtaaaaccctaactaagaca
>ORR1B|ORR1B  Rodent ORR1b MaLR-LTR - a consensus.
tgtggtggtttgaatraaaatggcccccataggctyatagggagtggcactattaggaggtgtggccttg
ttggaggaagtgtgtcactggggtgggctttgaggtytcakatgctcaagccaggcccagtgtgttcact
ctcttcctgctgcctgcagatcaagatgtagaactctcagctacttctccagcaccatgtctgcctgcat
gctgccatgcttcccgccatgatgataatggactaaacctctgaaactgtaagccagccccaattaaatg
ttttcctttataagagttgccttggtcatggtgtctcttcacagcaatagaaaccctaactaagaca
>ORR1C|ORR1C  Rodent ORR1c MaLR-LTR - a consensus.
tgtggtggtttgaataagaatggcccccataggctcatatatttgaatgcttggtcaccagggagtggca
ctgtttramaggattagaaggattaggaggtgtgrccttgttggaggaagcgtgtcactggggtgggctt
tgaggtttcaaaagcccaygccaggcccagtgtntctctctcttyctgntgcctctggatcagtatgcag
ctctcagctatttctccagcactanrtccactgncatgccgccatgctcyccatcatgatgytaatggac
taacctctgaaactgtaagcaagcccccaattaaatgttttcttttataagaattgccttggtcatggtg
tctcttcacagcaatagaacagtgactaagaca
>ORR1D|ORR1D  Rodent ORR1d MaLR-LTR - a consensus.
tgtggtggtttgaatragaatggcccccataggctcayatatttgaacgcttggtccccagttggtggaa
ctgtttgggaaggattaggaggtgtggccttgttggaggaagtgtgtcactgggggtgggctttgaggtt
tcaaaagcccaygccatgcccagtgtngctctctctgyytctgcttgakgrtcaagatgwnagctytcag
ctnctgctccagcaccatgcctrcctgcctgccgytccctnaccmcgacgatcacggactctraccctct
ggaactrtaagccaaattaaatgctttcttttataagttgccttggtcatggtgttttttcacagcaata
gaaaagaaactaagaca
>MYS1_PL|MYS1_PL  Mouse mys-1 transposon internal sequence.
aaatggcgcccaacggctcgagtttccaccttaaacctgagaatatttaataaccaattctaaacagagc
caaaaccaggttcctgcttcttgtcttatacggcagctagatgcggcaaaacgcaagtttggacactggc
gggttcctggcgggtgcgtctgaccggcagtatggcggaaatgaggcatctgccagcggcaaattaagct
gtgtggtagatttagtctttactattattttttttttaaaaaaaaaaaaaagaggtttctgggctacacg
ctgctttgataaaagcttagacccactatttctgagacttgatgactcccagagctggcggaaaatgtac
cactgccatgttgggaagctgaagtgggcggagccagcagccacagcgccgtttcacgcttacaatggta
cagtttaaagcaataggctcaaggctcaaggtaatataaaacataagccacataaagatggctaccacac
agagaatctggattatgttctctttgatattcataactaaagaaaaacatttgattacaaaagctgttga
gttatgccaaaatgtatattttaaaggtaccttgacttcaaaatttggatataaggatatgttactttgg
aaaagaggttctgcttttgtttccacagaaagccagaggctgtggacttgttccagattaagatacatca
ggtttcaccagccaagaccccctgaaaggactccgatgacaccatggcccagatgatccaacatccagat
cggtttcaaggcaactggttcacacaatacagcctcacggctaccccataggtctaaaattttctttgcg
tccccataagatacagcgcccccctccagcaggaagcagtaagagatgctacgcccaaattcccaaatat
accaagctggctttagaggtggaattggctcactccccctctaaacccagacatattgctttaaaaaaaa
aaaaaatggttaagagattcttgtgtcccaaatcagaagagccctctggtgtgggacagagaaaaaccaa
tatttttatttaaaacaggttgattataaatgtgatctctttctaaaaaagaaaaggggatatgatatat
aggaggatatggagatgataagataaaagggtagattaatgaacctacttttaaagaacaacttgtttaa
aatgttttacattggtatagattttagtttatgtttaaaatgttttacattggtataaattttagttcat
tgatacaaacttgaagttaattttgttatactgtatatatatatttctattcttgtttgaggtattatgt
ttatataactcatttaaaattgtaatggataattaaaaaataggttaataattagtcatctatgataatc
atatctgtagccatgttagttaagtcttctaggtatacatagatatatttcagatagataggtaatcttc
aaacacttcatagacctagaaaatatggcatttaaataacttagaattctgttgatgtgagacacaattg
ctcctggctgcaccaattgatcccgagagaatgttgggcttctaagacatttccatttggaagtttgtct
ttttggcacaaaatggcctactgggcaaagaactgcccttgccttgacggctgacagtacaaatgcaatg
ctgtcctttctggacaagcgggacacaaggaaagcgaccactgtactctgccaagacagggtaagatggt
ctctcagaattcctgcttctgaaaatggtctgtcagatactctaggcctgtagccaatttgaatgcacca
acaatgctgagaaacatcaggtgactgtccaggctgccagctgtcttggtctactcttgcaagattcccg
aagttgcttgcatccgtctaccatttctcaggtaccattatgttccttctcaggtctttgatgtggttga
aggctagatagtcgtaatttcctcagttatgataaaagataagttagctataaaaccttaaactcacaaa
tataagatagataggacatcttctttaatattgtaactataattcttgctcggtaattgttttgttatat
gtaattttaccatgttaaagttaaaaccttcctttttaaaaaaagaagaaaggggaag
>PMR6|PMR6  Mouse PMR6 middle repetitive sequence.
gcaggctagtcttttgcactgtttgcatagttctggggatcaatacctagggccttgtac
>PMR66|PMR66  Mouse PMR66 middle repetitive sequence.
gcaggagttgtggtgacatcagaagttgtcatcacttctccagtggttgttacttcagcagtggtggtga
tgaacaggagtggtggtaacatcaggtcttgtaacttgtccagtggttgtgacttcagaagtggtggtga
tgtcaggagtggtggtgacatcagaagttgtcataacttctccagtggttgttacttcagcagtggtgct
gatgacgggc
>PMR89|PMR89  Mouse PMR89 middle repetitive sequence.
gcacctggcccctcctacaaccaagaaagaagcacaacgtttagtgggtctatttggattctggagacaa
cacatccctcacttgggtgtgttacttaggcctatttaccaagtgactcggaaagctgctagctttgtgt
ggggcctggaacaggagaaggcccttcaacaggtccaggctgctgtgcaggctgctctaccacttggacc
atatgacccagcagatccgatggtc
>RAL|RAL  Rat RAL repetitive element.
tgaaaggaaaattatacgaatttaagtttaaaaatataaaattaaaagagtaagccccaaaagccacaaa
ctgagggctaagctgccgccaggaatagcaggccataaagataaagaaaaggaatacaaaaaccacctca
ggctatcaaggactgacccataaaccatccaaagacattcccccagcttactcagagtcatattttaacc
agatgtcctccagaccctgataagcccctacttgtgctttccagccattgtgtcctgcagagagcattcc
aggaaaccgggtagcccaagcctaaccagagtgtttcaaatacagatcttcatcaattctgacaaacctt
taaaaataatgaagacctgaagaccctacccttctcctgatttagtagctttgttccaggcaatcagggg
tccataataccttctgtcatccccttatctcctggagccataaaacaatccttgtaacttgtggtgcctt
cccctttgacatcccccatcccctggctacacagcctctgcctttaaatactctttctcccagcctctct
gggtcagaagagcctctgtctcctgcttgagaaacgtgtcagcgcgcagatctctgtaataggtctccgt
aataaacctcgcctttgcttattacatccaaaatggtctctctgtgtctggggtctgcgatttcccaaga
cttgagtaagggtctctctctggggtctttca
>RDRE1_RN|RDRE1_RN  Rat R.dre.1 repetitive sequence.
ggctggggatttagctcagtggtagagcgcttacctaggaagcgcaaggccctgggttaggtccccagct
ccgaaaaaaagaaccaaaaaaata
>ALSAT_RN|ALSAT_RN  Rat alpha-type repetitive DNA sequence (reiterated component).
agctttgcagttttatgagatcccatttgtcgattcttgatcttagagcataagccattggtgttttgtt
caggaaattttttccagtgcccatgtgttccagatgcttccctagtttttcttctattagtttgagtgtg
tctggtttgatgtggaggtccttgatccacttggacttaagct
>RNALUIII|RNALUIII  Rat Alu type III-like repeat.
gggctgagaatgtagctcagttggtagaatgtttgcctagcatgcatgaagccctgggttcaatcccttg
caccatataaa
>DRB_RN|DRB_RN  Rat repetitive region D of non-transcribed ribosomal DNA. 
attcattcattcattcattcggtcggacggacggacggacggcaggcaaccaaggtctggcctttaacaa
ggcaggaaggcataccctgcgggacgcacagagaattc
>L1NH_RN|L1NH_RN  Rat DNA with long interspersed repeated sequence (L1NH).
ggatccggcccgcagcagctcctccgctcctagacccggtgagagagagacccaaccgctttgttcaggt
gggcactcctgaggctgcagagcggaagagacctacctatactacttgctccaccccttgccttacatcc
cttggccctaagaggaaactgtataagcctccgggctccctttgggggaggtcctagg
>L1R2_RN|L1R2_RN  Rat L1R2 sequence DNA.
aaatgttcaacattcttagtcatcagggaaatgcaaatcaaaaggacctgagattccacctcacaccaga
cagaatggctaaaatcaaaaactcaggtgacaacaattgctggagaggatatggagaaagaggaacactc
ctccattgttggtggaattgcaacctggtacaactattctggaatcagtctggaatttcctcagaaaact
ggacatagtactacctgaggactcctctgggcaaatacccaaaaaatgctccaacatatgacaaggacac
atgctccactatgttcatagcagtcttatttgcaatagccagaagctggaaagaacccagatacccttca
acagaggaatggatacagaaaatgtggtacatttatacaatggagtactactcagctattaaaaacaatg
aattcatgaaattcataggcaagtggatgaaagtagaaaatatcatcctgagcaaggtaacccaatcaca
aaaaagcacacatggtatgaactcactgataagtggaaaatagcccaaaagctcagattacccaagatac
aatccacagaccacatgaagttcaagaagaaggatgactaaagtgtggatgcttcagtcctcttagatgg
gggaacaaaaatattcataggagtatatatggagacaaagtttggagcagaggctgaaggaatggccatt
cacagcctgctccacctggggatcc
>LINE3_RN|LINE3_RN  element.
gggaatagagaggcaaagattaaaacagacacagaaggaacacccattcagagcctgccccacatgtggc
ccatacacatacagtcatccaattagacgagatggatgaagcaaagaagggcaggccgacaggagccgga
tatagatcgctcctgagagacacagccagaatacagcaaatacagaggcgaatgccagcagcaaaccact
gaactgagaataggatccccgttgaaggaatcagagaaagaactggaagagcttgaaggggctcgagacc
ccatatgtacaacaatgccaagcaaccagagcttccagggactaagcaactacctaaagactatacatgg
actgaccattgactctgaccccataggtagcaatgaatatcctaataagatcaccagtagaaggggaagc
cctgggtcctgctaagactgaacccccagtgaacaagattgttggggggagagcggcaatggggggagga
tggggaggggaggggaagggggagggattagggggatgtttgcccggaaaccgggaaagggaataacact
cgaaatgtatataagaaatactcaagttaattaaaaataa
>LPKR_RN|LPKR_RN  Repetitive segment of L-type pyruvate kinase. 
gggggtgggtttgtttttgtttttgtttttgtttttttgagatcgggtctttttatgttgtagctctgac
tgatggataggcaggtctcaaatttagaaatctccctacctttgcctcctgagagttggactgggaccac
cttgctccacatgaggctgggtttttgagacagggtctcaggtagccttggatatttctagcttatttca
tagaccctattatatcgtcttagcctggtgaaagcataggtatgtgataccacacccaacttaacaaatg
cttgttgagtacctggaaaacaaggtttggaattgg
>RLTR7_RN|RLTR7_RN  Rat oncomodulin LTR-like sequence.
tgttggcagccgctattgctgcagagccgcgccttaaagatggcgctgcctgtgtgagtcagcaaaacct
gaagagcagcaacacgcatgtgcctacttgtcatggcctacgcccgaggcatgtgcaccaatcaggtgga
gacacgagtcttccaagcgtacataagccacactcttttctcagtcggggttccccttctcacaagagct
gaacaataaaggcgtgactgcagaagaatcctggtgttccaagtcgttcttgccggcgagaccaccgtgc
gggaca
>SATI_RN|SATI_RN  Rat satellite I DNA (isolated by sau3ai digest).
gaattcacagagaaacagtgtttcagttcgttaaaacgttgctctatcttgaataacaagcttattacat
gcgaatcctattgggaacctactgaattcaccatgatacttagattccgttcctcaaaatgttgctccat
attgaaaagcaaactcatacaagcatgtcccattgggaactcactgaattcgcctagaaattttgattcc
attcgtgaaaatttttctatatcccgaacagtccacttattactactgcggcccactgggaactaaccga
attcaccatgttactcagattcggctcaccaaattttgataaatctttaaaagtacacatattacaagag
caggctactgggaactaact
>RLTR6_MM|RLTR6_MM  Mouse virus-like 30S (VL30) LTR.
tgaagaatgaaaaattactggcctcttgtgagaacatgaactttcacctcggagcccaccccctcccatc
tagaaaacatttttgagataaaggcctcctggaacaacctcaaaatgacattgccaaatgataagacatg
actccttagttacgtaggttccttgatgggacatgactccttagttacgtaggttccttgataggacatg
actccttagttacgtagaatcctttggcagaaccccttgtcccttggcagaactccctagtgatgtaaac
ttgtactttccctgcccagttctcccccctttgagttttactatataagcctgtgaaaaattttggctgg
tcgtcgagactcctctaccctgtgcaaaggtgtatgagtttcgaccccagagctctgtgtgctttctgtt
gctgctttatttcgaccccagagctctggtctgtgtgctttcatgtcgctgctttattaaatcttacctt
ctacattttatgtatggtctcagtgtcttcttgggtacgcggctgtcccgggacttgagtgtctgagtga
gggtcttccctcgagggtctttcatttggtacatgggccgggaattcgagaatctttcatttggtgcatt
ggccgggaattcgaaaatctttcatt
>R91ES8_RN|R91ES8_RN  R.norvegicus 91ES8 DNA sequence.
gaattctgtccgttccaggctggaaaggcttgtaggaagttgactttggagataaaaaaaaaagcccctt
ttttccttttacaaagtgaatcgttcttacttggtgattaagcttagttttaagtagttctatatggtaa
aaagcatacttttctatatagacgaaaaatccttttcccagtctcaatatctcattctttggc
>CENSAT|CENSAT  Centromeric satellite DNA; satellite DNA.
acatagtatatgagtgagttgcactgaaaaacttagaatataagaaacgcacagtgtagt
>RMER1|RMER1  Medium reiteration frequency repeat - a consensus.
attgagcatcagagtgcaggagacgagcctcctcctggcactgggtagctagccggcatgctgagagctc
ctgtgtggttgggagagcgacaggtgaccaactcagctaccrcccaggcccagatccagggctttgagtt
ggcccaccccaacatctgcccatctgtgaatgctggagacatgaaggccagtcctgcgatccaaagctgc
aggatctccatgacacagggcaacaacaggatatccaagaggagtcctggtgaggatccagyattgatrg
tgcagaagccagaggccttgaaccagaccaatgactcattgcaatgaacatttgcaagcaaagaagtgtg
gacaaaagggtatactatktgacacactgcagctaccatgtgagttttgt
>RMER2|RMER2  Putative LTR of an endogenous retrovirus (a consensus).
tgagaggccaaatcttttaaattcagactccattttagagaacctgacctaagtttgaactcaggtaaac
taacaggctggtacctagcattagtttccaagttacccccccacnaacaaaacctgagcctagctccagt
ctctaggctaacccccaacaagaccagcgtctccaggttacacccccaacaagaccagcgtctccaggtt
attcccccaacaaacctgcacccccaggttacaagcccaccccctgtctaatgaccaccaatgcagaggg
aagcagaaattaagtttatgatatgactcccagcaccagccaattatgttaaaggccacagtagctttcc
aattagatgcttgcacactcaccccctgcttgctgcttactataaagccttgccctgatagatattcggg
gcwcccccccatcaccaaaaccatcctgcgtgacagtggtgygntgggggngccngagctagctcgaata
aagaccctgctgtgagttgcatcagattggctcctgtctgttttttggggratcactaacayttccctgg
cactaca
>RMER3|RMER3  Medium reiteration frequency repeat - a consensus.
tgttgttgtaaaaatataaaaataaagagtacagttgtcttttaccccgctaggtccgcaccacggtgcc
caagatatctgctagatatcttggcggaaacacatcccagccgcacacttttttacactcaaaccctcac
ataaaagaacacacaacacaataatcttagacccaattggtaagatataattgcccacctaaacatacaa
agcccggtaccatccatcccttaagaacattaataacaacctgtaaatacacagagcggaatcttaacgt
cacctgccatattgtcctgccatggcttctccgcctctctctccctcctgtctcttcctctctcccttcc
agtctcctcctcttccttcaaacttctctcccgcccatccttccttctcctccaatgacaggcctccttc
tatcctgtacctgcccctcacctgtattttacaaattcaatggggagaaggttctggtgaagtcacctga
gtcctgagtacgtgactaggcagctgtccttggggcagtggaattagcatcaaaatacagataacttcag
ggcaaaccacaaca
>MSTC|MSTC  (MSTc subfamily) - a consensus.
tgctacggtttgaatgtttgtcccctccaaaactcatgttgaaacttaatccccaatgtggcagtattga
gagrtggggcctttragaggtgattgggtcatgagggctctgccctcatgaatggattaatggattaacg
tattaatggattaattggttatcacgggagtgggatcggtggctctatcataaaarycattttgnctctc
gnrtgngccccttcttgccctttcacgccttccgccatgttatgacagagcacaaggccctcaccagaaa
ccagatgcagccgccatgatcttggacttcccagcctscagaaccgtgagcaaaataaacctcttttctt
tataaattacccagtctatggtattccgttaaagcagcacgaacggactaagaca
>MLT1A|MLT1A  (MLT1a subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>MLT1B|MLT1B  (MLT1b subfamily) - a consensus.
tgttatgggctgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gactgtatttggagatagggtctttaaagaggtaattaagttaaaatgaggtcattagggtgggccctaa
tccaatatgactggtgtccttataagaagaggaaattwggacacagacacgcacagaggraagrccatgt
gargacacagggagaaggcggccatctrcaagccaaggagagaggcctcagaagaaaccaaccctgccgr
caccttgatctcggacttcyagcctccagaactgtgagaaaataaatttctgttgtttaagccacccagt
ctgtggtactttgttacggcagccctagsaaactaataca
>MLT1C|MLT1C  (MLT1c subfamily) - a consensus.
tgttatgggttgaattgtgtccccccaaaattgatatgttgaagtcctaacccctagtacctcagaatgt
gaccttatttggaaatagggtcwttgcagatgtaattagttaagatgaggtcatactggagtagggtggg
ccctaaatccaatatgactggtgtccttataaraagaggaaatttggacacagacacgcacacggggaga
aggccatgtgaagacggaggcagagattggagtgatgcakctacaagccaaggaacgccaargrytgcca
gcaaaccaccagaagctaggaagaggcaaggaacagattctccctcacagccytcagaggarrccagccc
tgccgacaccttsatctcggacttctggcctccagaactgtgagagaatamatttctgttgtttaagcca
cscagtttgtggtactttgttacggcagcccyaggaaactaataca
>MLT1D|MLT1D  (MLT1d subfamily) - a consensus.
tgtggtaggcwgaataatggctccccaaagatgtccacgtcctaatccccagaacctgtgaatatgttac
cttacatggcaaaagggactttgcagatgtgattaagttaaggatcttgagatggggagattatcctgga
ttatccgggtgggcccaatgtaatcacaagggtccttawaagagggaggcagagggtcagagtcagaaga
aggagatgtgacgatggaagcagrragngaaaactcaacgttgctggctttgaagatggaggaaggggcc
atgagccaaggaatgcgggcagcctctagaagctggaaaaggcaaggaaacggattctcccctagagcct
ccagaargaacgcggccctgccgacaccttgattttagcccagtgagacycattttggacttctgacctc
cagaactgtaagataataaatttgtgttgttttaagccactaagtttgtggtaatttgttacagcagcma
yaggaaactaataca
>MLT1E|MLT1E  (MLT1e subfamily) - a consensus.
tgtggtaggcagaattctaaratgmtcccaatgatcctcgcctcctggcgtaatctccttgagtgtgagt
aggacctgtgacttgcttctagccaacggaatatggcaaaggtgatgaratrtcacgtgattacgcgtac
gtgattatgtaasattcagtctttgmcgtcattcttgccgagagactctcctsctggtyttgaagaagta
agctgccacgtcatgagnnnncnnannagarygccgcaaggcaagggnntctagagctgagagtcgccct
tactgatgggcagcaagaagcaagccacctcagtcctacagccgcaaagaactgaattctgccaacaacc
tagtgagcttggaagcagatcctgcccagtcgagcctccagatgagancgcagccctggctgacgccttg
actgcagccttgntagaccttgagcagaggacccagctaagccgtgcccagactcctgacccacagaaac
tgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgttacgcagcaatagaaaa
ctaacaca
>MLT1F|MLT1F  (MLT1f subfamily) - a consensus.
tgtggtagccagcctccaagatggcccccaatgatccctgctcctggtattcacayccttgtatggtcyc
ytcctacattgaryyagggctrgtctgtgtgaccaatagaatagggcagaagtgatggcgtgtsacttcc
aagaytargtcayaaawaacactgtggyttctgcyttgntctcttcgggctactcactctgggggaagcc
agctgccatgctatgaagacactcaagcagcctatggagaagtccacgtggsaaggaactgaggtctcct
gccaacagccagcttcgacytgccagccatgtgagtgagccatcttggaagcggatcctccagccccagt
yaagccttcagatgactgcagccccggctgacatcttgactgcaacctcatgagagaccctgagccagaa
ctacccagctaagctgctcctarattcctgacccacagaaactgtgagataataaatgtttrttgtttta
agccactaagttttggggtaatttgttacgcagcaatagataactaataca
>MLT2B2|MLT2B2  Interspersed repeat MLT2B2 - a consensus.
tgtgatggttaattttatgtgtcaacttgactgggctaargggtgcccagatagctggttaaacattatt
tctgggtgtgtctgtgagggtgtttccagatgagattagcatttgaatcagcggactgagtaaagaagat
tgccctcaccaatgtgggcgggcatcatccaatccgttgagggcctgratagaacaaaaaggcagaggaa
gggtgaatttgctctctctccttgagctgggacatccatcttctcctgcccttggacattagaactccag
gttctcgggccttcggactycgggacttgcaccagcagccccccagattctcaggccttcggactcggac
tgaryyacgccaccggcttccctggttctccagcttgcagacggcatatcgtgggacttctcagcctcca
taatcacgtgagccaattcccctaataaatcycytctatccatcctattggttctgtctctctggagaac
cctgactaataca
>MLT2D|MLT2D  Interspersed repeat MLT2D - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacattagtct
gggtgtttctgtgaaggttattttttggatgagattaacatttaaatcggtagactgagtaaagcagatt
accctccctaatgtgggtggacctcatctaatcagttgaaggcctgaatggaaaaaaagggctgaccctc
ccccaagtaagaggaaattctgcctgcctgatngtcttcgaactggaatatcagctctgcggattttgga
cttgccagcctccataattgcatgagccaattccttataataaatctatctactctctctacacacaccc
tattggttctgtttctctggagaaccctgactaataca
>LTR10|LTR10  Human DNA sequence 5'-flanking minisatellite PMS32.
tgttgtaaataaatttttggtgctgcaaaagaaataccactcaaacataagtttaattttctcagcaagg
caattttacttctctagaagggtgcgactcgcagatggagcaatggccagagcacacctgaacaagggag
gggaaggggttctgattcctgacacaggtagcccctactgatgcgtcgttcccgtatcggctagggttgg
actgcacagtctaagctaattccgattggctactttaaagagagcaggggtatgagccagagtggcgggg
tgagtagtttggtgggaagggtggtt
>MER2|MER2  Nonautonomous DNA transposon.
cagtcggccctccgtatccgtgggttccacatccgtggattcaaccaaccgcggatcgaaaatattcaga
aaaaaaattgnatggttgcgtctgtactgaacatgtacagacttttttccttgtcattattccctaaaca
atacagtataacaactatttacatagcatttacattgtattaggtattataagtaatctagagatgattt
aaagtatacgggaggatgtgcgtaggttatatgcaaatactacgccattttatatcagggacttgagcat
ccgcggattttggtatccgcggggggtcctggaaccaatcccccacggataccgagggacgactg
>MER20|MER20  Nonautonomous DNA transposon.
cagtggttctcaaccgggggtgattttgccccccaggggacatttggcaatgtctggagacatttttggt
tgtcacaactggggggggggratgctactggcatctagtgggtagaggccagggatgctgctaaacatcc
tacaatgcacaggacagcccccacaacaaagaattatccggcccaaaatgtcgatagtgccaaggttgag
aaaccctg
>MER25|MER25  Older LINE1 5' end region - a consensus.
acaaantagggaaaaatggcggataggaggcaggactaaattgcagctcccactcggatggacagagcag
catgtggagactcacatcgtgaacttttgctccaagaaccaccgcaggaatataycaagaaagccgagag
aatycacagaccctctgaaggaagcagattgctcctgcargayccaggaaacggcccaaaaactgtgagt
gcccaaagtgtgagaagggraaaatctgcccccgaacacacatcctyactggggaacctgaagatccaga
tcacaggagaaggatttgaccttacctggagctgagacaatttagagggccgagcaaaatacaggggtag
aggaagcagcgggaaaagccccgtgggcactcccagtcyyyagnnaarcccagggaagccatttctgact
tatctcacaggggtcccttgggagggcagccggaggaactgggaaagggscacagggaaaagaaaacctc
cagctgaactttgtaataattccgaccgakagagaaatttcctggccagaactmagggcagggcgrcgka
agtgctggtgggagaccagaagtgctgttgggggggacacggtrggagtgagacytgccttttgagctgc
atgggagctgggtgaggcctgtnactgccagctttcccccacttycctggtgacctgcatgacacagaag
aggcagccataatccccctgggaacgtaactccattrgcctgggaactacacccccatccctcacagtag
ccgcagcaagccccgcccaaggagactctgagctcagacatgcctaaccctgcccccacctgatggtctt
tctctacccaccctggtagccgaagacaaaagacataawctcttgggagctctayggccccacccatcgc
ctgagaaacwgaaatayttaycywggcmamcttagggcaagcttrtatccwccctatactrtcgcagctg
atgccctcttgaaagcgccacctcttggctggaggccaaccaactcaagacattacagcaaytcayraca
gaataaccctgcccctarrraaggagaaaacgacagctatcaccactgcctgcaacatcctggctaacca
gaggtcctgagtctgtccacgtgayaasttcactrctakyataaccagcattcgagaaarccagcacact
aagtctatctacaaccaaggaatctcacagagtctayttcactcccctgccacctccatcagagctggtg
ctggtattcaccgctgrgagacttgaagacaggtcacatcacwggatycyttgcagacattccccagyac
cagcccggagtctggtagctccactgggtggctagayccagaagagcaataacgatcactgyagtccggc
tctcaggaagtcccattcctaggrgaagggggagagcaccacatcaagggaacaccctgtgggacaaaag
aatctgaacggcagsccttgagtcccagatcttycctctgacatagcctacccaaatgagaaggaaccag
aaaaayaattctggtaatatgacaaaacaaggttctttaacacccccaaaaratcacactagctcaccag
caatggatccaaaccaagaagaaatcyctgaattgccagaaaaagaattcagaaggtcgattattaagct
actcaaggaggcaccgaggaaggtgaanaccaacttaaagaaanttanaatataatacaggatatgaatg
raraaatctycagwgaaanagatagcataaakaaaaaacaatcamaacttcwggaaatcgaagyacactt
atagaaatgcgaaatgcwctggaaagtctcarcaatagaatngaacaagcagaagaaagaacttcagagc
tcgaagacaaggytttcaaattaacccaatccgacaaagacaaagaaaaaagaataagaaaatatgaaca
aagcctccaagaagtctgggattatgttaaacgaccaaacctaagaataatcggcgttcctgagnaagaa
gagaaatctaaaagtttggaaaacttattcgnggaaataatcgaggaaaacttccccgrcsttgctarag
ayctagayatccaamtacaaagaagctcwawraaca
>MER30|MER30  Nonautonomous DNA transposon.
caggggtgtccaatcttttggcttccctgggccacactggaagaagaagaattgtcttgggccacacata
aaatacactaacactaacgatagctgatgagctwaaaaaaaaaaaamaatcccamaaaaatctcataatg
ttttaagaaagtttacgaatttgtgttgggccgcattcaaagccatcctgggccgcgtgcggcccgcggg
ccgcgggttggacaagcttg
>MER31|MER31  internal sequence belongs to the MER4I group.
tggtgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaagccc
cgaccttgggcyctgtccttggcctgcwnagtccagttttagcaagaatcctgctaagtcagtttagaga
gaatcccccaccctcgatatctgatcaggttcctcatcctccgccatcccccaggcgatgtctgatcacc
ctggcctgccttcagcaagaatcctgttaggtcagtttagcmagaatccccctacccctgatgtytcctc
ttagtaattttccatccactgacccccaccctgctccttggctataaatccccacttgtccttgctgtat
tcggagttgagcccaatctctctcccctactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtctgccttaccgtgctttaacaagtgtcgttgaataattttctctgaca
>MER33|MER33  Nonautonomous DNA transposon.
ctgcgctgtccaatacggtagccactagccacatgtggctattgagcacttgaaatgtggctagtccaaa
ttgagatrtgctgtaagtrtaaaatatacaccagatttcaaagacttagtacgaaaaaaagaatgtaaaa
tatctcattaataatttttatattgattacatgttraaatgataatattttggatatattrggttaaata
aaatatattattaaaattaatttcacctgtttctttttacttttattaatgtggctactagaaaatttaa
aattacatatgtggctcgcattrtatttctattggacaacgctg
>MER42C|MER42C  MER42 repetitive sequence: subfamily MER42c - a consensus.
atgtayagkaggattgatcaaataagtaaacgtattnaagataatgggagccaggtttctcactgtcgga
gaagggagttacaaatatggaaagggrgaagrctagaatgaaccctgtggtattrgattrgaattggagg
tatcagtrtgaactcatgrtttttaatatayryryryryrtttttcctagtcctgtccactgagagggcc
tagaagcaacgacaccccagtagcaacgagcacacctagcacccagatcttggtttctaaataccattct
ccactaaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatgtacaagat
gagcctggaacatcttgttrtgccagaaaataaggaagtgctcaaaaaacgatrrgggcatrtcaaaagg
acacagaagccagcttgaaggggctcccactggccaaatctgggacaatttgagcatcaaaataaataat
rgtagtaatggattataactcattgaataaaataaatatccatgagttcatactaatataaataaatgaa
taaaawaaataaatgagaarggaaagctcttcttacagtngaatgccaantaataaatntagaargaata
ataatagaaaaatcaccattaggcaaayaccgcagtaataactgtttyaggcaagatccatcgatagatg
ctmtaattagtgggcgaaartttgatgagaaacggratatttgcatagtctcaaagtatctcctcacaag
atatttattaattacaaagggaaaaayagtgactttacagtagagaaacctggcagacaccaccttaacc
aagtgatcaargttancatcaccaaaaatgagacaaaytgacatcatgcgcyncctgatrtgatgcgccg
agaagaacaacatsgcttctgtgatattcctgccaaagatgcataacctgaatctaatcatragaaaata
tcagacaaacccaaattgagggacaktctacaaaataactggnctgtactcatcaaaartgtcaaggtca
taaaagacaargaaagactgaggaactttctacntttgacggaagactagarncatgacaactaaatgca
acgcgggattctgrantggatcctggrtcgagaaatagtgggagtttktayctataaaggacattattgg
gacanttgrcgaaatttgaatanggtctgnagattagataatagtattgtatcaatgttaatttcctgat
tttgataattgtaytgtggttatgtaagagaatgtccttgtttttaggaaanacacactgaagtatttag
gggtaaaaggncatsatgtctgcaacttactctcaaatrgttcagraaaaaaaatnnatatayataarya
gagaatgataaagcaaatgcggyaaaatgttaacaattggtgaatctgggtgaagggtatacgggwgttc
tttgtactattcttgcaacttttctgtaagtttgaaattacttcaaaataaa
>MER44A|MER44A  Nonautonomous DNA transposon.
cagtagtccccccttatccgcgggggatacgttccaagacccccagtggatgcctgaaaccacagatagt
accgaaccctatatatactatgttttttcctatatatatatacctatgataaagtttaatttataaatta
ggcacagtaagagattaacaataactaataaaatagaacaattataacaatataccgtaataaaagttat
gtgaatgtggtctctttctctcaaaatatcttattgtactgtactcacctattttcggaccgcggttgac
catgggtaactgaaactrcggaaagtgaaaccgcggataaggrgggactactg
>MER46|MER46  transposon - a consensus.
caggttgagtatcccttatccaaaatgcttgggaccagaagtgtttcggatttcggatttttggattttg
gaatatttgcattatacttaccggttgagcatcccaaatctgaaaatccgaaatccaaaacgctccaatg
agcatttcctttgagcgtcatgtcggcgctcaaaaagtttcggattttggagcatttcggatttcggatt
ttcggatttgggatgctcaacctg
>MER53|MER53  a consensus.
gggttgccagatttagcaaataaaatacaggatgcccagttaaatttgaatttcagataaacaacaaata
attttttagtataagtatgtcccatgcaatatttgggacatacttataactaaaaaattattcattgttt
atctgaaattcaaatttaactgggcatcctgtattttatctggcaaccc
>MSR1|MSR1  Human 37 BP minisatellite repeats, specific to chromosome 19.
agtcaagacccccagcccctcctccctcagacccaggagtcaagaacccccagcccctcctccctcagac
ccaggagtcaagaacccccagcccctcctccctcagacccaggagtcaagaccccccagcccctcctccc
tcagactcatgagtccagacccccagcccctcctccctcagacccaggagtccagacccccagcccctcc
tccctcagacccaggagtccagacccccagcccctcctccctcagacccaggagtccaggccccacccct
c
>TIGGER1|TIGGER1  Autonomous DNA transposon.
caggcatacctcgttttattgcgcttcgctttattgcgcttcgcagatactgcgttttttacaaattgaa
ggtttgtggcaaccctgcgttgagcaagtctgtcggcgccatttttccaacagcatgtgctcacttcgtg
tctctgtgtcacattttggtaattctcgcaatatttcaaactttttcattattattatatctgttatggt
gatctgtgatcagtgatctttgatgttactattgtaattgttttggggtgccacgaaccgcacccatata
agacggcgaacttaatcgataaatgttgtgtgtgttctgactgctccaccgaccggccgttcccccgtct
ctctccctctcytcgggcctccctattccctgagacacaacaatattgaaattaggccaattaataaccc
tacaatggcctctaagtgttcaagtgaaaggaagagtmrcacatctctcactttaaatcaaaagctagaa
atgattaagcttagtgaggaaggcatgtcaaaagccgagataggccaaaagctaggcctcttgcgccaaa
cagttagccaagttgtgaatgcaaaggaaaagttcttgaaggaaattaaaagtgctactccagtgaacac
acgaatgataagaaagyaaaacagccttattgctgatatggagaaagttttagtggtctggatagaagat
caaaccagccacaayattcccttaagccaaagcctaatccagagcaaggccctaactctcttcaattcta
tgaaggctgagagaggtgaggaagctgcagaagaaaagtttgaagctagcagaggttggttcatgaggtt
taaggaaagaagccatctccataacataaaagtgcaaggtgaagcagcaagtgctgatgtagaagctgca
gcaagttatccagaagatctagctaagatcaytgatgaaggtggctacactaaacaacagattttcartg
tagatgaaacagccttctattggaagaagatgccatctaggactttcatagctagagaggagaagtcaat
gcctggcttcaaagcttcaaaggacaggctgactctcttgttaggggctaatgcagctggtgactttaag
ttgaagccaatgctcatttaccattctgaaaatcctagagcccttaagaattatgctaaatctactctgc
ctgtgctctataaatggaacaacaaagcctggatgacagcacatctgtttacagcatggtttactgaata
ttttaagcccactgttgagacctactgctcagaaaaaaagattcctttcaaaatattactgctcattgac
aacgcacctggtcacccaagagctctgatggagatgtacaaggagattaatgttgttttcatgcctgcta
acacaacatccattctgcagcccatggatcaaggagtaatttcgactttcaagtcttattatttaagaaa
tacattttataaggctatagctgccatagatagtgattcctctgatggatctgggcaaagtaaattgaaa
accttctggaaaggattcaccattctagatgccattaagaacattcgtgattcatgggaggaggtcaaaa
tatcaacattaacaggagtttggaagaagttgattccaaccctcatggatgactttgaggggttyaagac
ttcagtggaggaagtaactgcagatgtggtggaaatagcaagagaactagaattagaagtggagcctgaa
gatgtgactgaattgctgcaatctcatgataaaacttgaacggatgaggagttgcttcttatggatgagc
aaagaaagtggtttcttgagatggaatctactcctggtgaagatgctgtgaacattgttgaaatgacaac
aaaggatttagaatattacataaacttagttgataaagcagcggcagggtttgagaggattgactccaat
tttgaaagaagttctactgtgggtaaaatgctgtcaaacagcatcacatgctacagagaaatctttcatg
aaaggaagagtcaattgatgcggcaaacttcattgttgtcttattttaagaaattgccacagccacccca
accttcagcaaccaccaccctgatcagtcagcagccatcaacatcaaggcaagaccctccaccagcaaaa
agattacgactcgctgaaggctcagatgatcgttagcattttttagcaataaagtatttttaaattaagg
tatgtacattgttttttagacataatgctattgcacacttaatagactacagtatagcgtaaacataact
tttatatgcactgggaaaccaaaaaattcgtgtgactcgctttattgcgatattcgctttattgcggtgg
tctggaaccgaacccgcaatatctccgaggtatgcctg
>TARE|TARE  Transposable element.
gaattccgcgcccgtcccgtcgccgccgccgccgccgcagacccctcggtcttgctatgtcgagctcacc
cgtgaagcgtcagaggatggagtccgcgctggaccagctcaagcagttcaccaccgtggtggccgacacg
ggcgacttccacgccatcgacgagtacaagccccaggatgctaccaccaacccgtccctgatcctggccg
cagcacagatgcccgcttaccaggagctggtggaggaggcgattgcctatggccggaagctgggcgggtc
acaagaggaccagattaaaaatgctattgataaactttttgtgttgtttggagcagaaatactaaagaag
attccgggccgagtatccacagaagtagacgcaaggctctcctttgataaagatgcgatggtggccagag
ccaggcggctcatcgagctctacaaggaagctgggatcagcaaggaccga
>HERVR|HERVR  Baboon endogenous retrovirus (BaEV), internal part.
[encoded data, 7455 characters]
gatgaagaagctcaagattgagcctctaagacacaagaaaag
>HERVE|HERVE  Human endogenous retrovirus; family HERV-E; internal part.
[encoded data, 7881 characters]
taagaactcccactaaaagtgaaaattctcaaagggggggaaa
>ORR1BI|ORR1BI  Retrovirus-like internal sequence flanked by ORR1b MaLR-LTR.
gaagttggtaccagggactggggtattgctgtgataggcctgaccatgcttatgtttggaagaatgtgga
ttttgggactttggattagaaaagcagttgaatgctttaagtggggcttaatgggccgtgctagtaggag
catggaagacrgtggtgctgagggtaatttgaattgtggggacctggctcaagaggttacagaggagaag
aattttagtatgtggcgtagaggtttttcttgtgatatttgggcgaagaatgtggctgcrttttgccctt
gttcaaaaggtttgcctaaggctaaggtgaagagttggattagctgcattggcagaggatatcttacaat
tgcctagtatggattttgttgtatggttattagtattcgctcatgcaaatctacagtgaaaaggagcaaa
ctgagaaagagaaaaaatacaaaaatgcatactttgaggagaaaggaggcaccaggaagtagactgtagc
taaggcctgtgttgaaggagataaacagattagagaaaagcttgatgctaagtggaataaagggagcggt
gacctcagaccaagatcccacccagataaacttccaattttggaaaagaaattaaagaaaagtgaaaagg
aattaaagaaaagcccagggccaggcctggtggtgcacacctttgatccaagtgctcaggaggcagaggt
ttgtggatcttaaagtttaaggctggcctgttacacagattgagttttaggacagccaagcttaggcagt
aaaggaaaccatcaaaaccagctggtgaagatgtaattgaatgagtatgagaacttggcagctttggcca
catggttctggtttagagtcaaggaaagaaggaatggattatgggattgccctccttgtctaaggaaaac
tgctgaagccaggcacgtgtgatgggtgttcttgcatagaggcttaaagaggttactgtgtgaagctgtg
aaaatgamgccnnrrttgccttggaaacccaagatrttggagatgcctgksttcgtktrctgccgaggaa
agctgctaacagggagtggaaccagcccgagggagaggagtgcatggcatacaacaaagctgaaaggagt
tggagatctgaagagcgctttgacatcagacatcgagatgcagagtttggagtttgcccagckggttttc
agtcttgctttggtcccgtatttcctcactatgctcccttttcncyrttttggaatggtaatgtatatcc
tgtgcctgtgtgnyagragtatgtrayctgtttactttytgattttgattttacagaggattamagttaa
ragattgtatgagtctcagaagagactttgaactttgracttttaaacaagtttgagactgtgrtagact
atggggacttttgaarttggactgaatgcattttgcattatgatatggctacaagcctatgggggtccag
ggagtggaa
>MTAI|MTAI  Retrovirus-like internal sequence flanked by MTa MaLR-LTR.
aattggtaccagcagagtggggtattcctgtgacaacctgaccatgttttggggaggactgtggaaggac
tttggaactttgggcttgaagatccatccgttgttaagagctctgtcggatgttgtgtaggagcttggaa
gataatgttgagaacactgcagaagatggaggtctggtttgtgaaatttcagagggaaaattaaagactc
ttttcagggccattgctgttttgattgtgaagattctgtagttctggttagctggggctgaagaatcagc
tgtgattaacaagataccagaactaccaaagcaaaaactttgcattactgggactattgatgctggttag
ctggagctaagaaattagcggtgattaagaagagaccagcatcattgaggtgacatcttctgggaagtgt
tttctgaaagcacaaagaggctgtgttccagagatggccaaggttgtactcctgctgcagcgggacttgg
taatatgtaagggtcacccaggtggtactggttttgaaggcatgaaggggtcacgcaaagcagctgaggc
tcggcactgtgagaggccatggaaggccattggtgaaggtgcagcctcagttgcaattgaaggcccagga
ctgaaggggtcatgcagtgttttggagatgccagtaccatgagatgaccaccaagagcagcagcagcagt
ggggtacaggcatctggagcctagaggatgacgcgtgtgctacaaagggcatggctggagaagtgaccca
agcccttggaggagcccagaagatcgtgagttggatcccagacattggacggttggagattgacttttgc
ttttgattgtgactgtgccctgatattttccctcttgaaggaagaaactgttttagtggagcccacagtt
aagagacttttaattgtaaaaagactttggattttaaaagagatggatattttaaagagattgaaatttt
aagaatatgtaaagactgtgggacttttaaagttatttagatcttggggatgaataagaatgtaagggtt
gaggcttactagtgatgtgtttgtgtgtcaagttgacaaggggtcaat
>MUSID2|MUSID2  SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcaagcacaaggccctgggttcgatcctcag
cacmmnaaa
>MUSID3|MUSID3  SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcatgcacgaggccctgggttcgatccccag
cacmmmaaa
>MUSID4|MUSID4  SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcatgtatgaggccctgggttcgatccccag
caccgcaaa
>MUSID5|MUSID5  SINE element, ID family.
ggggctggggatgtagctcagtggtagagcgcttgcctagcatgtatgaggccctgggttcgatccccag
catctccaaaaaa
>MUSID6|MUSID6  SINE element, ID family.
ggggctgggggtgtggctcagtggtagagcccctgcctagaatcccccagtgaggggctgggggcgtggc
tcagtggtagagcc
>B3|B3  SINE element, B2 subfamily.
ggggctggagagatggctcagcggttaagagcactkgctgctcttscagaggacccgggttcggttccca
gcacccacatggcggctcacaaccgtctgtaactccagttccaggggatccgacgccctcttctggcctc
cgcgggcaccgcatgcacgtggtacacanacatacatgcaggcaaaacactcatacacataaaataaaaa
taaatmtttwaaaaaa
>RSINE1|RSINE1  SINE element; RSINE1 family - a consensus.
cggggccggcgagatggctcagtgggtaaaggcgcttgccgccaagcctgatgacctgagttcgatcccc
gggacccacatggtggaaggagagaactgactctgaaattcccgcaagttgtcctctgacctccacacac
gcgccgtggcacgcgcgcacacacacacacacacaca
>RSINE2|RSINE2  SINE element; RSINE2 family - a consensus.
gggctggggagatggctcagtnygtaaagtgcttgccgtgcaagcatgaggacctgagtttgatccccag
aacccacataaaaaagcagggtgtggyagcgcacactgtaatcccagactggggaggcagagacagghgg
atccctggggctcgctggccagccagcctagccwaatcggcgagytccaggttcagtgagagatcctgtc
tcaaaaagaaaagagggagaggacctgaggaagacaccygaggttgacctctggcyyccacatayatgtg
cacatgtgcacacatgcacacacacacacacacacacacacacacacacacaca
>RSINE2A|RSINE2A  SINE element RSINE2 subfamily - a consensus.
tggggctggggagatggctcagtcgataaagtgcttgccgtgcaagcatgaggacctgagttcggatctc
cagcacccacgtaaaagccgggcatggtgatatacgcctgtaatcccagcgctggagaggcggagacagg
aggatccctggggctcgctggccagccagcctagccgaatcggcgagctccaggttcagtgagagaccct
gtctcaaaaaataargtggagagtgattraggaagacactcggtgttaacctctgacctccacacacaca
cacacacaca
>RMER4|RMER4  Medium reiteration frequency repeat - a consensus.
tgctactttgtggttttcttcttccacccttctccacccttccaaccccyaacactagataggagagaaa
gaaagatagagggaaagagggatagatctcyttgttactactwcttyctgctgattaggggyrtcgagtt
ccttggggcaagttcaatcttcayygtcaggatatctaatttcttcttyttrtttcttctttgcncacga
ctacttaacaaaccacaacnaacagcaaccaaycaacarccgcccccccaccagcatcccaccccatctc
tcagggctctagcattcatataccctctgaaragtccccagaattccaaayrtcacacaatcncagaaac
tatctacagctggcaaaatcaygcccctgctagagcacaaggcaaatcataatcasctgctgtggacaat
ctgaagcagccccatatcccacacctgggattaaaayaaaagcacattcctatttctgtgtttttaaaga
aaccaaaattctcactaca
>RMER5|RMER5  Medium reiteration frequency repeat - a consensus.
atctctgatgaggtggaatgttcaggtccagggaaaacttatcttgggctatytttagcccccttcatag
mcayccatcgcctacctctatgtttgaactaacaycctgtgactattaggtaaaacccttttagaatata
ctaatagacccctagcttccaccaaccawagctaagattatcatcagatagagctktcctcactttgcca
tagctccctaccctgtattcccaccaatgtatttgaaaattgccttratttatgactttcttttcttacc
atawaaatcatgaaactgttaccacttggaacatagcatttgagtaacttaaatccgtgctcccaggatg
gtcatcatatgctccagataactcttatccttaatgaagtgtgtttttcaa
>RMER6|RMER6  Medium reiteration frequency repeat - a consensus.
aatgtaacttttattctcctgatgtaatgttgtctggaggcttacagcctccgtctgctaacctaggcct
agacctagaagcttctagctttcgtacaatcttatctaagcctagaatgttttcagcctctgagacttcc
tgctgaataagctcacccttcctagttctttctgatctctggctggttcaactcagctgtttgctcaaac
tcctctccaagctgactgattcaatctggcttctctctcctcctctcctgaattgctctgcttggcctca
aactaactctggcaatctgttctaatcttctggctccttctcattctctggcttgttctgtctttacctg

>LX4|LX4  3'-end of L1 repeat (subfamily LX4) - a consensus.
aggacccagctataccactcctgggcatatacccaaaagatgctccaacatataacaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagctggaaacaacctagatgtccctcaaccgag
gaatggataragaaaatatggtayatttacgcaatggagtactactcagctattaaaaacaaagacatca
tgaaattctcaggcaaatggatggaactagaaaatatcatcctgagtgaggtaacccagacacaaaagga
cacacatggtatgtactcactgataagtggatattagccatacagtacgggataaccatgctacaatcca
cagacgcaaagaagctaagtaaggaggaaggcccaagggaggatgcatgaatcttactcagaaagggaaa
taaaatagtcatcagaggtagatggagggagggaactgggtgggagagrrgrtggggaagggaacagnat
ggatcaggatcaggtytggggagrarcaggagagaagtacagagggccaggagantgaatggaaatccgc
gtgggggtatctctaggatgtcccagagacctgggataggggaggttcccaggagtctatgagggtgacc
ctagccgagactcctagcagtggggatatggaacctgaagaggccgcctcctgtaaccaggcaggacctc
cagtggagggacggggacaccaaccyayccacaaaaccttcgacccamaatttgtcccgtctacaagata
tgcagggacaaagatggagcagagactgagggaatggccaaccaatgaccggcccaacttgagacccatc
ccatgggaaagagccaacccctgacactattaatgatactctgttatgcttacagacaggagcctagcat
aactgtcctctgagaggctccacccagaagctgacggaaacagatgcaganacccacagccaaacattgg
acggagcttggggactcttgtggaagagtgggaggaaggattgagggagccggaggggacggggactcca
caagaagaccmacagagtcaacwaacctggacccatgggggctcwcagagwctgaaccaccaaccaaaga
acatrcatgggctggacctaggccccctacacatatgtagcagatgtgcagcttggtcttcatgtgggtc
ccgaacaactggagcaggggctatcmcaaaakctgttgcctgtccgtgggatatgttcttctagctgggc
tgccttgtctggcctcagtgggagaggatgcacctagcctcgcagagacttgatgtgccagggtgggggg
atacccagggggggccccaccctctcagaggagaaggggagggggagacgggggaaggatcgtgggaggg
ggtgaccaagaagggggcagtgagcgggatgtaaagtgagtaagtaaaaatwaataaataaataaa
>MTE|MTE  Long terminal repeat of retrovirus-like MaLR element.
tgtgatggttaatsttaattgtcaacttgacgggatttagaatcacctagraracgggcctctgggcatg
tctgtgarggaktttctwganwrgtttaaytgaggtgggaagacccgccccgaatgtgggcggyaccatt
ccctgggctggagtcctggnntgaagargtagaggaagcgagcckagcaccagcattcatctctctctgc
ttyctgactgcggatgcmatgtgaccagctgcctcaagytcctgccgccgtggcttctctgccacgatgg
actggaacctgaaactgtgagycaarataaaycctttctctcttaagttgcttttgtcagggtatctkrt
cacagcaacagaaaagaaactaagaca
>MT2A|MT2A  Long terminal repeat of retrovirus-like element; MT2A.
tgtgatgrctaatcttggttgtcancttgactacatctggaatcaactaaaacccaagcagctggacgcn
cctgtgagrggttttcttgattagattatttgaggtgggaaaatncaccctaaatctgggccacactttc
tggytgcagcccgyatrraagracatggaagaaggaagtctagcttttgcttttgcctgcttgccctcay
kcttgctggcaagttcatctgtcctgctgctgaggtatccttcgctggtattaragcctacttcttcagg
attccagcatatactgaagascagcwgatctccaggactcctccataactcnagyaccaggytgggacta
ccgagacagcagcctgtgagccgttctaatcaatcccctacaaatagaacatttttcttccatcagttct
gttccgttggagaacccagactaataca
>MT2B|MT2B  Long terminal repeat of retrovirus-like element.
tgtagtggctattcctggttgtcaacttgactatatctggaatgaactacaatccagaattggaaggctc
acccgtgatccagatcttgaggctgggagacacaagtttctgacctggatcttggcacggagatcttgag
gcatagtggccatgaaaancttaggcccaggcaaggtagtacangcctttaattccaggagactgaggca
aggagatctctgagttcaaggtcagcctggggcaaagcaagtcccagatccaggcatggtggtacacacc
tttaatctgggccacaccttctgctggaggcctacataaggacattggaagaaggaaggttcactctctt
cgcctgcttgcacttacttgccagcacatctgttggagcctacttcttcaggattccagcttatacagaa
gaccagctgaaacagctagcctagcgggactgagcaactactagatccttggacttcccattcacagctg
accattgttgggttagttggactgcagactgtaagtcattccaataaattccctcagtatagagagacat
tccataagttctgtgactctagagaaccctgactaataca
>MT2C|MT2C  Long terminal repeat of retrovirus-like element.
tgtagtggctattcctggttgtcaacttgactatatttggaatgaactacaatccagaattggaaggctc
accagtgaccctaatctggaggctgggagatacaagtttctgacctggatcttggtatggagatcttgag
gcatagtggctatggattccagaagattaaggcagggagatctttgagttcaaggtcatcgcctgcttgc
ttcgtgagactgagtaactgctagatccttggacttccattcacagctrcnactgaaccattgttgggaa
ttggactgcagactgtaagtcatcaataaattcctttactatagagagacattccataagttctgtgact
ctagagaaccctgactaataca
>LX|LX  Murid LINE repeat sequence 3' end - a consensus.
aggacccagctataccactcctgggcatatacccaaaagatgctccaacatataacaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagctggaaagaacccagatgtccttcaacagag
gaatggatacagaaaatgtggtayatttacacaatggagtactacacagctattaaaaacaatgacttca
tgaaattcttaggcaaatggatggaactagaaaatatcatcctgagtgaggtaacccartcacaaaagaa
cacacatggtatgcactcactgataagtagatattagcccaaaagctcggaatacccaagatacaattca
cagaccacatgaagctcaagaagaagaaagacyaaagtgtggatgcttcagtccttcttagaagggggaa
caaaatactcacgggaggaaatacggagacaaagtgtggagcagagactgaaggaaaggccattcagaga
ctgccccacctggggatccatcccatatacagccaccaaacccagacactattgykgatgccaagaagtg
catgctgacaggagcctgatatagctgtctcctgagaggctctgccagagcctgacaaatacagaggcgg
atgctcgcagccaaccattgaactgagcacggggtccccaatggaggagttagagaaaggactgaaggag
ctgaaggggtttgcaaccccataggaagaacaacaatatcaaccaaccagacccyccagagctcccaggg
actaaaccaccaacmaaagagtacacatggakggaccyatggctycagccgcatacgtagcagaggatgg
ccttgtynggcatcaatgggaggagaggcccttggtcctgtgaaggctcgatgccccagtgtaggggaat
gccagcggrgaggcgggagtgwatgagtgkgtgggtgggggagcaccctcatrgargcaggggrcaggag
gatgkgatagggttytcggagggraaccaggaaaggrgataayatttgaaatgtaaataaagaaaatatc
caat
>LX2|LX2  Myomorph LINE1 repeat, 3' end - a consensus.
tagayayyatgtagcaatraaatgantcytratgatattctgctatactcatagattagtgcctagctya
gccatcatcagagaggcttcmtcctgcagcagatrgraacaaatacagagacccacagccaagcactgag
ccgagctccwggagtccagttgaagagagggaggagggattrtaggagcaaagggttcaagaccatgatg
gggaaacccacagagacagctgacctgagctagtgggarctcatggaccctggactgacagctaggaawc
cagcataggactgaactaggccctctgaangtgggtgacagttatgtggcctgggcagtctatggggcct
ctggcagtrgaaycagtacctatccctagtgcacgaatggactttgggagcccattccctatrgtgggat
acactctcagcttagatacanggggaagcgtctaggtcctgccccaaatgatatgccagactttgttgat
ctcccatggaaggcctcaccctccctggggagcggawggratgggattggggatggtgggggggattggg
aggaggggagggagagggaactgtgattgggatgtaatataagataaaaaattaataaa
>LX3|LX3  Myomorph LINE1 repeat, 3' end - a consensus.
atrggaakggggggttcaggatcargtgtggggagrgrcaggrkagrgggccagatggccakgagaatga
ayggaaatctgcggntgnnnagagtgtgggggtgcggggcatctytaggacgagmcagagacctgggawr
ggggaggctcccaggagtcaatgkgggtgaccytagctgagactcmyagcarcgggngatatggaaactg
aagtggycacctcctgtagccaggyaggamytccagtggagggatnaggacaccaacccayccacaaaay
ttntamccaaaatttgtcctgtctacaagatgtgcagggayaaaratggagcagagaytgagggaatggc
caaccaatraccggcccaacttgagacccatcccatgggagagmaccaanccctgacactattgatgata
ctctcttatrctcgcagacaggagcctagcatagctatcatcggagaggcttcatccagcaantgatgga
aacagatgcagagacccacagccaaacactaggccgagctccaggagtcccgttgaagagagagaggaag
gattgtaggagccagagggttcaaggacaccgacggraaaacccacagaaacarctaacctgggctcgtg
ggarctcacggasactggaccaacagctaggaagcctgcatgggtctgamctaggccctctgcatatggg
tgacagttatgtagcctgggcagtctatggggcctctggcagtrgaaycagtacctatccctagtgcacg
aatggactttgggagcccattccctatrgtgggatactcwctcagcctagayacanggggaagggcctag
ttcctgccccaaatgatgtgacagactttgatgatctcccatggaaggcctcaccctccctggggagcgg
awggggratgggatgggggagagaagaggtggagaggaaggattgggaggggaggaaggaggggaaactg
tgattgggatgtaatataaaataaaaaattaat
>URR1|URR1  Rodent-specific putative non-autonomous DNA transposon - a consensus.
tagggcagtggttctcaaccttcctaatgctgcgaccctttaatacagttcctcatgttgtggtgacccc
caaccataaaattattttcgttgctacttcataactgtaattttgctactgttatgaatcgtaatgtaaa
tatctgatatgcaggatatctgatacgcgacccctgtgaaagggtcgttcgacccccgaaggggtcgcga
cccacaggttgagaaccgctgctgta
>B3A|B3A  SINE element, B2 subfamily.
ggggctggagagatggctcagcggttaagagcacttgctgctcttgcagaggayccgagttcggttccca
gcacccacatcaggcggctcacaaccgcctgtaactccagctccaggggatccgacgccctcttctggcc
tctgtgggcacacgcacwcacacgcgcacacacacacatacacataaaataaaaataaatmtttwaaaaa
a
>L1MM_F|L1MM_F  LINE1 repetitive element 5' end.
atcgaattcagtcagttgaacacgtgagccaaaataccatcaaggcaagcacattaaatactgagtctga
catagtatttttaaattaaacacaccagtccattgaagcgcagattcaatattaaatcaatgatgtcgca
tgtagagcagtcttataaagtgccatatgatatattaaatctaatttattagaaactaatatctgagaac
cagacagatcactttttgctggtaatatgtagctgatctttcaaatcagacacttattgaacaaaatcct
cagtcctgaataccacaaaacaaaacaatataacacagtttttctctgagatttaaaaaacaaaaacaaa
aacaaaaacaaaactcaatatggtaatgagataaaaatagacttaaatctctaagaacacttacatttaa
gaaaggaatattataaaatgctaactagggttcctggattctgccgagactagtctgcgcaggtgagagt
gtggtctacagaatttaacagcttctggaacaggtggaaaccatggagcttctgaggcagaccgcgtttt
ggggctccagacatctgtgcaccttccctgccagaggagaggtgtccgccctgcctgggagggctttgcc
acagcacctaggggagacatcttggttcctgggtcccaccaagactagtctgtgcaggtgagagtatgga
ctatagaagctaacagcttctgggacaggcagaagccacagaacttctgaggcagaccctgttttgggct
ccagacatccggacaccttccctgccagaggaaaggtgtccgccctgcccgggagggcattgccagagca
cctgggggagccatcttggttcccagatcccaccaagactagtctgcgcaggtgagagtgtggactacag
aagctacgcagattctgggacaagccctgtttcaggccttcatcttctgccaggaggcaggtcggaacac
cagatatctgtgcaccttccctgcaagaggagagcttgcctgcagagagtgctctaaccactgaaactca

>L1VL1_5|L1VL1_5  LINE1 repetitive element 5' end.
tatcagaaattgaagtggaaatatttacaacttcatgctaaggttgggtttggcccatggtagtctccat
ttagatgaatataagtatgtatattattgaattaattgtgtaatgtagaaaataaagatgcagaaacagg
cctaaccagggcaacaagtcccttctggtcagcaccagcaccttgggcaaggagtggcagacacacccat
ggtccctagaggactctccaagtgatcttagtcactggtgaacagaacacaacttcagtccaatccaatt
atgactggcctgtgacagcaggacaaggacaccggaacccttcctgaacagaggttcagattccttttga
tcagttctggttacggtttcaaacagaccacacagctccacagtcctcaaaggagacaccaatttccagg
catgtaacatgcccaggatcttaggacaactgaatcccagaataacaagagctggtcacaccagtatttn
agggtctcagaggagcttgactgccaagaactagacacacccagaatctcaggttcacaggatcccagaa
tcaaaggatcacagagaaagctggactctgaggagtcctgaatcaaccgggattataggaaggacaggct
ccaatcagatatatcgagggcagcaagcactagagataatcagatggcggggggcaagcgtaagaacaga
agcaacagaaaccaaggttacttggcatcatcagaaccaaactctcccaccatagcaagtcctggataca
ccatcacaccagaaaagcaagatacggatctaaagtcacttctcatgatgatgatggaggactttaagaa
ggaatacaggaaaacacaggtaaacagctagaagcctttaaagaggaaacacaaaaatcccttagagagt
tacaggaaaacaataccaaacaggtgatggaaatgaacaaaaccatccaggatctaaaaatggaaataga
aacaataaagaaaacacaaaggagacaactctggagatagaaaacctaggaaagaag
>L1VL2_5|L1VL2_5  LINE1 repetitive element 5' end.
ggatccaggggtgcaggaacccctgactagccagtggcacaggttccttccagtctgggccagtgcccta
agcagaccttgggtgcanactctgcagccagtcccacaacacccagaggaagctccactcccaggcgccc
taacacgcccaggatcacaggatccaggagcgaagaggacacaacatccstcccaaaagcacnnnnagta
actgggaccaataggatccagngatncaggaaccccgcccagccagtggcacaagttccttctagtttgc
gcctgcgcccggagcaaacctagggctcwggctccccacccactcctacaacacccagaggaagctcgac
tcccaggtgctctgacacgcccaggatcacaggatcccaggatcccagaagcttggtcacaccaggatct
cagggtcccagaggcagcttgactcccaggagctctgacacacccaggatctcaggatcacaggatcaca
gaatcacaggatcacagagacagctggactctgaggaattctgacacaaccaggatcacaggaaggacag
gcttcagtcagatatantgaggacaggcaggcactagaga
>LX2B|LX2B  3'-end of L1 repeat (subfamily LX2B) - a consensus.
cctgtctgaaagaactacagggacaaaaatggagaggagcctgaggaaaaggacatccagtgacaggccc
aaagtgggatccagctcaaggggaggtcccaagacctgacactatcactgaggctacggagcgctcacaa
aaagggacctagcatgactgccctccgaaagacccaacaagcagctgaaagagtcagatgcagatatttg
cacccaatcaatggacagaagctgctgacccctgtggttgaattagggaaaggctggaagaagctgagga
ggagggcgaccctgtaggaggaccagcagtctcaattaacctggacccctgagatctctcagacactgga
ccaccaaccaggcagcatacaccagctgatatgaggcccccaacacatatacagcagaggactgccgggt
ctgtgttcagtcagagawgatgcacctaaccctcaagagactggaggccccagggagtttagaggtctgg
tggggtggggngtggggacatcctcgtggagacaggggtacgggcaggaggtatgggatgtggaacagtc
agagggtggaccgggagcggaataaaatctggagtgtaaaataaaaaaaaa
>LX5|LX5  3'-end of L1 repeat (subfamily LX5) - a consensus.
aggacccagctataccactcctgggcatatacccaaaagatgctccaacatataacaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagctggaaacaacctagatgtccctcaaccgag
gaatggataragaaaatatggtayatttacgcaatggagtactactcagctattaaaaacaaagacatca
tgaaattctcaggcaaatggatggaactagaaaatatcatcctgagtgaggtaacccagacacaaaagga
cacacatggtatgtactcactgataagtggatattagccatacagtacgggataaccatgctacaatcca
cagacgcaaagaagctaagtaaggaggaaggcccaagggaggatgcatgaatcttactcagaaagggaaa
taaaatagtcatcagaggtagatggagggagggaactgggtgggagagrrgrtggggaagggaacagnat
ggatcaggatcaggtytggggagrarcaggagagaagtacagagggccaggagantgaatggaaatccgc
gtgggggtatctctaggatgtcccagagacctgggataggggaggttcccaggagtctatgagggtgacc
ctagccgagactcctagcagtggggatatggaacctgaagaggccgcctcctgtaaccaggcaggacctc
cagtggagggacggggacaccaaccyayccacaaaaccttcgacccamaatttgtcccgtctacaagata
tgcagggacaaagatggagcagagactgagggaatggccaaccaatgaccggcccaacttgagacccatc
ccatgggaaagagccaacccctgacactattaatgatactctgttatgcttacagacaggagcctagcat
aactgtcctctgagaggctccacccagaagctgacggaaacagatgcaganacccacagccaaacattgg
acggagcttggggactcttgtggaagagtgggaggaaggattgagggagccggaggggacggggactcca
caagaagaccmacagagtcaacwaacctggacccatgggggctcwcagagwctgaaccaccaaccaaaga
acatrcatgggctggacctaggccccctacacatatgtagcagatgtgcagcttggtcttcatgtgggtc
ccctaacaactggagcaggggctgtctctgactctgttgcctgcctttgggttccgttcttctagctggg
ctgccttgtctggcctcagtgggagaggatgtacttagtcctgctgcgacttgatgtgccagggtgggtt
ggtacccawggggggctttcccttctctgaggagaaggggagggggtaatgggggaaagagcgtgtgagg
gtgkgactgggaggagaggagggagcgggatgtawaatgtggatgtaaaaatwaataaataaataaa
>LX6|LX6  3'-end of L1 repeat (subfamily LX6) - a consensus.
aaacaacctagatgtccctcaatcgcaggataggtaatgaaaatatggtacatttacacaatggaatatt
actcagctattaaacatagattggtaatagattggtaatagattccactgtgaaaattgaattatgaaat
ttgcaggtaaatagatggaactaaaaaaaaatcatccttagtgaggtaacccagacccaaaaaaacaaat
atngtatgtattcccttatatgtgaatattagcttttaaatcatcgatagccatgctacaatccatanaa
ctacagaggttcagtattgagtkagtgaactagggktgaggggaaggtctcsttgaatggggaaacatag
aatagattgtaaaagagacaggatgagagtggaacaggagagaaggacggaagaaaggaggatgggagag
gatatggggagagagaacaaatactaatacttaactaatacaaatacttaactaagctccaactaawacw
aagggccatttcggagntcatatggaatcctactacagtagaagctttttaaaatatatacgtacatgga
ggtaatctaagtgaaatnatcaaataatagggagacaaagccccaactagccatctcttgtcaccaaatg
aaacttccagtaccaggaatgggttacatctaattgagttgttggccaaagaggtcccataggaatcccc
aaacaacccaggctgttgtcaaggatatagnttgctttccacaaactgatggcaaagccctatttctgaa
gacaacacatacacaactcattgaacatggagaaatcgagccggtgcctacatagaaccttcacccctac
gttctagtgtctttggtacgggaaggtactctgcgggctaccaaaagagaaacgtaaacaccaggccagc
cacaaaacctttgatctacaatctgtcctgcctgcaagatacgctagggcaatggtggcacaaagcttgt
gggagtaaccaaccaatgtctaatttgacttaaggcccactccacgagaaggaacccatacccgacactg
cttggatgaccaagaaccagagactagatagcccagaggcctagggtagaaccaaatactgctgttctaa
aaacagaacagtagcgataaaatgactcctaatgkcacattctgctatactcatagatcagtgccttgct
cagccatcatcagagaagctccatccagtaactgatgggaacagatgcagagacccacagccaaacatta
ggcagagctcagggaaccccagggaagaggaggaggaaggattgtaggagccagaggcatsgaggacacc
aggagaacaaggcccwcwgaatcaactgagcagggctcatatgagctcacagagactgaagcagcacgca
cggagcctgcatgggtctgcaccaggtcctccgcatatatattatagcttccagtttrgtgtttttgtgg
gattcctgagagtgcgaacgagtgggtctctgattcttgtgcctgcttttggggctctttttctcctatt
ggtttgccttgtccagcctcgatgtgagggtttgtgcctaatcttattgtattttgttatgccatgttcg
gttgatatctctgggaggcctgctcttttctgaagggaaacagaagaggagtggatccggatgggagggg
aggtgggggggaactgggaggagtagagggaggggaaactgtagtcaggatatattgtatgagagaagaa
tctatttttaataaaa
>LX7|LX7  3'-end of L1 repeat (subfamily LX7) - a consensus.
aaacaacctagatgtccctcaatcgcaggataggtaatgaaaatatggtacatttacacaatggaatatt
actcagctattaaacatagattggtaatagattggtaatagattccactgtgaaaattgaattatgaaat
ttgcaggtaaatagatggaactaaaaaaaaatcatccttagtgaggtaacccagacccaaaaaaacaaat
atngtatgtattcccttatatgtgaatattagcttttaaatcatcgatagccatgctacaatccatanaa
ctacagaggttcagtattgagtkagtgaactagggktgaggggaaggtctcsttgaatggggaaacatag
aatagattgtaaaagagacaggatgagagtggaacaggagagaaggacggaagaaaggaggatgggagag
gatatggggagagagaacaaatactaatacttaactaatacaaatacttaactaagctccaactaawacw
aagggccatttcggagntcatatggaatcctactacagtagaagctttttaaaatatatacgtacatgga
ggtaatctaagtgaaatnatcaaataatagggagacaaagccccaactagccatctcttgtcaccaaatg
aaacttccagtaccaggaatgggttacatctaattgagttgttggccaaagaggtcccataggaatcccc
aaacaactcaggctgttgtcaaggctattgnttgctctccacaaactgatggcaaagccctatttctgaa
gacaacacatacacatctcattgaacatggagaaatcaagccggtgcctaaatagagccttcacccctac
ggactagtgttcgtggtaggagaaggtactctgcgggctaccagaagagaaaggtaaacaccaggccagc
tacaaamcctttgatctacaatggtgacctgcctgtatgatacgctagtgcaatggtggcacaaacgttg
tgggagtaaccaacctatctctgattggacttaaggcccactccacgagaaggaacccatgcccgacact
gcttgggtggccaagaacctgagactagataggccatgggcctaggggaaaaccaaatactgctgttcta
aaaacagaagcgtagcgataaaatgactcctaatgacattctgctatacccatagatcagtgccttgctc
agccatcatcagagaagcttcctccagtagtagacgggaacagatacagagacccacaaccggaaaacgt
gcagagagtgagagactttggaacacccagtcctaaatggaatgcctccatcaaaccccttccctcagag
ctcagggaaccccacagaagagaaggcagaaggattgtaagagccagtaggcatggaagacaccaagaaa
acaatgccctctgaatcaacaggaccgatctacatgtgaactcacagagactgaggcagcacgcacgggg
cctgcacgggacctgcacagacggagtcccagwgctgaaaggaggagwtggacacawactcccatcccta
atcaagaagttatctccaattgacaaccactcgcaaakgaaaattkagttttctccaagggagtctcact
ggggawacaaaccacacttaagggcaggccccatgcccagcagtagatggccaacasaaaacaaactcaa
cagtatttttggagatktcttgtctcataacgccatatcwgggcnccatctttccctacaggtcctccgc
atatatattatggcttccagtttagtgtttttgtgggattcctgagtgtgtgaacgagtgggtctctgtt
tcttgtgccctttattgggctcttttctcctttttgtttgttttgtccatatcccaatgtgttagttttt
gcttaatcttattatattttattttattattgtcccttagaagcctgtttgttttctaatgagagacaga
aagggagtggatccggatgggaggggaggtgggggggaactgggaggagtagagggaggggaaactgtaa
tcaggatatattgtatgagagaagaatctatttttaataaaa
>LX8|LX8  3'-end of L1 repeat (subfamily LX8) - a consensus.
aacacaagagaaaaagaagaaagaagataaataccactaaggatnttcgaaangctctaaggaatcatat
tattttatktttacctgaaatgtgtgtgtgtgttaatttaaatgaagttatcccacttgggstgataatg
ctccctccaagagccaaagaccatctaacaaaancccmaacaccaggcatgagaarccctctttcgagtt
gttggtcagggkwktccaagagactcccaaaacaatatgggctattgctattgccmttggttgtcccagn
agaggtagaaggtaagtccctwttgctgaagacaccatgcacttcggacacaggacccagaggmccctga
gctggaactgacctgaawatcttctccctgaggactagctttcatggtaccagaaggtgctatgcaagct
tccaaaggagagaggcaackaacagtccyacccagccgtgatgcctatgaaccacatcaacgaccagcat
ggcacaataaccccaagggtgcagtagtggcackcacaccttggcggtaaccaacagctctctaattgga
cttaagrcctgctcaacaagagggaaatcatacttggtactgaaaacccggctaaatacccatggctggt
gargtcatgggccttagaggagaacctacaaccgccactttactaaaccagtacaatncctaactgcatt
ctaaatatttatccttatacccacagataggtgtagtcctcacccctcatcaaggaaacttctctttgca
acagacagagaccattacagaaaaccacaaccaatcaaaatgcagagttgtggagcccagtcccagcgga
tacatctacaaaacaactcctgcacctaaggctcagggaacatcgcggaagagggagcagaaagattgta
agagccagaggatcagggagtttggtgtgagactgtgtctcctagtaatgtcagaagctacacccatgag
gtctcaccaacatgactgcctaaacatgagctgagcaaggacgacagcaatggacacgctaaagtggaca
ggggaaagctcaccaagcctcaaccctacacaaagaactacaggcaactaaggaatgctgagagtgggag
aaatagtcttcccccgggaagagcacatcaattggttatccaataccaaatggtcagccctgaaaacata
yacayacaagtaacattatacagactgagcaggttgtatttatgtatttangaatagatryryryryryr
yryryryryryryryryryryryryryryrcaattaawgaaaaaagaggccatgaatttgaaaagaagca
wggaggnntatatgggagggtttggagggaggaaagggaagggagaaatgntgtaattatattataatct
caaaaaataaaaa
>LX9|LX9  3'-end of L1 repeat (subfamily LX9) - a consensus.
gntggacaatgctcctcccagaagacataggtcaccaaatgaaaatctcagcgccaggtacgggmtacct
ccttatgagcgattggtcagggaggccccgtaggcgtccaaaacaatacaggctgttgccattgctcttg
gttgcccaccagaacttgatrgtaagaccctattgctgaagacaccacacactttggtcgcaggacatag
agaaatcaagttggarctgagctggaagcctcctccctgctggctagctttcacagtgccagaaggtgct
atgcaggctgccgggagggaaaagtyatcaatggtcttacccagtgctgggccttgaatgctacaatacc
aatctaccggtgcaatagtggcatractgctatgggggtaaccaaccgctttctgattgtatttgaggcc
tgctccacaggagggaattcattcttggtactgtaaacctggtcaaaagcctatggctgkggaacgtcat
aggccctaggggagagcctactactgttattttgctaaatggtcatgttgtcaaactgccttctaaatat
ttatgtttatacccatagattagtgctgctctcaactttggtcagagaagttcccttttgcagtgggcag
cggttagcgcagagactcataactggtcaaagtgctgagaataartgactgttgagtgctcagccctaaa
tgggacatctatattacnnacattccgagctctcagggaacattgnggaagaagaggcagaaagantgta
agagccggaggatgggggggagtgctgtgaaatgctgtcttctgracatgacatggccattacactcacg
aactcatagcagctgtggttatctgcacaagacctgcataagatcgagccagtcaacattycatcataga
tggaggagaggctcatgaggccccaccccactgargagctactggcagctgatrgywgctgggggaggag
tcatttttttttgnnggtgtggtcactggtaggttgcccatgttccagtggatggccccacacccacata
catgtaggwaagacttattggaytcagtgggttatcaaaaaaaggggacaaggaacnaaagaggatatga
agktggcggagggacatgktgggggaatttgggtggagttgaaggggagaaatggaatgtagttatgatc
atatttcattgt
>MERVL_LTR|MERVL_LTR  Long terminal repeat of endogenous retrovirus.
tgtagtggttattcctggttgtcaacttgacaatatttggaatgaactacaatccggaattggaaggctc
agcagtgacccttatctggaggcttggagatccttatctggatcttggtttgaagatcttaagccatagt
ggctatggattccagaagattgaatctccgagtttaaggaacacacctttaatctgggctgcgcctttca
tctgggattaaaggtgtggtgggacacacctttaatctgggctacaccttctgctggagacaatataagg
acattggaagaagggagtctagctcttgctcttgttccttcacctgcttgctgcgtgagactgagtaatt
gctagatctttggacttccattcacagctgcgactgaatcattgttgggaattgggctgccaactgtaag
tcatcaataaattcctttactatctagagactattcataagttctgtgactctagagaaccctgactaat
aca
>MERVL|MERVL  Internal sequence of endogenous retrovirus.
[encoded data, 5538 characters]
tgtgtcaagttgacaaggggtggat
>RLTR8|RLTR8  Long terminal repeat of endogenous retrovirus.
tgcacatctgttgggagccaactcttagcagaaagcggctatcatctctgcagccatctcgggctattta
cttacaggtggtacttttccaccctgatgagagacttgttttcctagcatgatgtttttgcaagaagccc
accacagctgaacacactctgataacatcttgtttttctcctacacatcctggacctgtggttaagtgtc
tccagctgcactccccagcttgtgcttatatacccatagttgcctttcaataaatgagacttgatcagac
agmccgtcctgtctccattcttcgwgtctcttgcccctccgtccccactctctcccttgcagaccccgtt
gactgacccg
>RLTR9A|RLTR9A  Long terminal repeat of endogenous retrovirus.
tgtgccytcycccagccttgagcgggctgawtcagaccttgtttwtgccacagccggctagcccacctag
ggtggagtcttccgacctaggtaaagtctattgtctgccacatctgcagcttcctscaagacgccactac
ctgctgagmggctgagcttgttctaaggagatcctgacaagccacgagatcctggcatagtgggggatgg
gctcccccccttttaaggttcagacccaaaaagtaaasattgggccttgatcagagaactttgtcttggc
tccttatttctctcgccgcccttcccatccaaccccagctttcctttcaggaacccaggaasccatggcc
gctggcggctaca
>RLTR9B|RLTR9B  Long terminal repeat of endogenous retrovirus.
tgtagcctccccagccttgagcaggctggctcagaccttgctgccactgagaatgagaccacctggggtg
gagccttccsacctagatggttctattgttctgtcacctgccgctgttcttctccaagacgctgctaccc
gctgagaggctgaacctgttctcctgagacattcctgagatagctgacaacctgtggaattgncgacntn
ntgctaaacagctgtgkcagacaaattgcttacaggctakcaacaaaccttcagagtgtgatctgcaggg
gatttccccctttataagcacagactcttagtaaacattgggccttgatcagcaatntgtcttggcctcg
tttcatactctcacgttctctcccwtacagctccggcctgcccactcaggaacccagtttgtgtggctgc
aggcggctaca
>RLTR10A|RLTR10A  Long terminal repeat of endogenous retrovirus.
tgtggggagcgggtgtggcggcagtcccaaaggcgccagggactgcagctaagtcatatgacttgcacct
gacttcctcatataaaccacaaacatcttgagwgctgcgcaggtgtaccaggatacaggtgaatccawtt
tggtggagatwtacccctgctgccctgattagctgaagctgcgtgcctggtgaggtggcgtggcctgctg
tgcgtggatgggaactgagagtatawaagagtgagaggcccagggttcgggggagatataaaaacaaggg
agatataaaaacaagggagatataaaaacaggggagatataaaaacaagggagatataaacaagggagat
ataaacaagggagatataaacaagggagatataaagaaagaagaaacaggactgaataaacgtgtgcaga
aggatcctgttgcggcgtcgttcttcctggccagttgggcgcgcgcaaca
>RLTR10B|RLTR10B  Long terminal repeat of endogenous retrovirus.
tgtgaagccgttgcagagtggcagttgcagagtggcagttacagagtggcagttgcagggtggcagttgg
ctactgctggccaccacacatacataggcagtaaaggttcttttgccaagatgaggttttgagaattgac
caaagttaaccaatcagatgagagacaagttaaccaatcagatgagagagaacgcctctcctaggcctat
ataagcagcaccagttctgggctcggggtctcttcgcctctgcaatcaagctctcccaataaacgtgtgc
ggaaggatcctgttgcagcgtcgttcttcctggccagtcgggcgcgcgcaaca
>RLTR11A|RLTR11A  Long terminal repeat of endogenous retrovirus.
tgttgaggtttggtctkttgctatgtattgtaatgctaaacactggcccccaagacctggttgcccccag
ggatgagaatccgcacatacacccaagtgatgctatgtgaccttgcccccaagttatctctgattggtga
ataaagatgcctacagcttatagctgggcagaagagagatgggcggggtttgggttcccgggcttggggt
cggaggagaaccacgaggagggagagtgtaggwgaagagagagrgaagccgccatgggttaggtgagtca
tgaaaacatggccatgagggctggccaattggagttaagagcagcccagatgaaacatagcaagtwataa
ctcgggttatcggcaggaaagtagattctaatagcgtagagggtaggtatctgcccagctcttgtgctgw
ttaaggcttattgtaaatataaaggttgtgtgtgtcttttatccgggaactaaatggtcaaaggcggagt
agaaaccccaggtcgagattaaataatttctacaaca
>RLTR11B|RLTR11B  Long terminal repeat of endogenous retrovirus.
tgttgaggtttggtctgktgctatgtattgtaatgctaaattctgtatccgaagatctaggcctacgagt
gaattctcacatntacaagcntttgttgtgcaaaccttgttccttaatttaaaactattggttaaataaa
actggctacagccaattactggaggaattagaggtaggtgggttttgagttacctggttgggggtgagag
aaggaagaaaannaggaggrgagaggaggaagccgccatcgaaggggagaagggccatgagcacatagcc
aggagaaacagcaagtatctggggtacaccgtggggaggtagccaggccagcagttagaagagtagatta
ggggttaccccccagtaattatcaaagccaaataaaataaccatagtctgagtctcatttatttgtaagc
tagtcggggataagcttacattggttgtactaca
>RLTR12|RLTR12  Long terminal repeat of endogenous retrovirus.
tgtaggsataatgtttttgtgcactgtgtaaaggttrtccttgtattattcaaatgctgatttctgtgcc
ckcannacttattcgatctggntacagcattgtaatatttntgttaagaatctcctgtctcaatgttgtg
taaacattgttcwccatcayyctctgmytkgtcaataaaggctgatcagccagtgrctgggcaggataga
gaatagggcgggacttcctccaagccaggggaaggggcaggakagagatgagtggagatttgacttgggg
agagagtccaggagataccataagaaaatacctagaacccagagagccagatcagtactaaaatgcaaat
atca
>RLTR13A|RLTR13A  Long terminal repeat of retroviral-like element.
tgaaatgccagggactccggtggagtcagcttgacagatgaaagtctgaaagctttctcatgaggaaaga
gtttcaaggaaacttactcccggatctttggctattcccctaacccataaaattaattttccattcccac
attagtctagtgtatggatccacgtgcactctatatagtattaccttatagtaaatgccttttaagattg
tattctaacatagctaaagccttttcccagtgttcttagattccagatagcagcaaggagcttaacccat
tcagtaactaattaagctctaccataaaacaataaagcacttgccattaactcagctgtttgcagataga
gactaaaagtctcactgagatagaaatcttttactacaggctacattccatgtcaagtataagttgatat
actaccctgataagggagaactctccagacaagataagttttactagacctaagaatttagagctctgtg
ataccacattactcttaaggcctgtcaagagttaacaaccccctgatgcttttaaccttaaagtgtgaaa
ttcttgcctggcattaggctgatcctaggcagggcttgttatccctaatgtaaacatttaattagtccct
gcaaattcctttctgctgtaactggtgaatttcagtgtatcttgtcttttgtgatttgtatcctttgata
attcgttgttatataagtctgaagctcaaccagaacattacattcagattcaacacctctcttgtgtgtg
cctgtctgtcacttcatccgactcttttgcccatctgcctaagaaatcccgttcctcgcagaccagggac
ccagatggtctgcggca
>RLTR13B|RLTR13B  Long terminal repeat of retroviral-like element.
tgaaatgccagggactccggtggagtcagcttgacagatgaaagtctgaaagctttctcatgaggaaaga
gtttcaaggaaacttactcccggatctttggctattcccctaacccataaaattaattttccattcccac
attagtctagtgtatggatccacgtgcactctatatagtattaccttatagtaaatgccttttaagattg
tattctaacatagctaaagccttttcccagtgttcttagattccagatagcagcaaggagcttaacccat
tcagtaactaattaagctctaccataaaacaataaagcactagccattaattcagctgtctgcagaaaga
gtctggaattctcactgagatagaaatccttattacagactacattccatgccaagagcaaattggtata
ctatactgataaatggakaktctccagatatagataagaattaacgaggcctagagaattttggggtcag
tgacactacattattcttgaggcgtgtcaagagttaactaccctggtgctattaactctaagtgtaaaac
tcttgcctggcagaaagtgctaatctctagtgtaaacatttatctggtccctacaaattccctttgtagt
cactccccttgcatctgtgctaatctctagtgttaaacatttatctggttccttttgaagtcactccttt
tgcacctggaaaaattcaatgtgccttgttctgttatgatttgcaatttattctgtattataaaagtctg
atgctcgactggaacattacattcagattcaacacctctcttgtgtgtttggctgtctgtcacttcatcc
taatctttgcccatctgctctagagacccgttccacgcagacacagggacccagagggtctgcggca
>RLTR13C|RLTR13C  Long terminal repeat of retroviral-like element.
tgctacacccactccagtgaagtctgcctgacaggcccaaaagcctggacacagtcccgaggcaaaaagt
ttcacggaaacttagtctcctggaaccttggcatcccgtakcacgaatgctccaaacttgtccctgcgtt
agttggtgaatggatctgcgtgctttcyttcagtattgttttattataggtgcctccaaggaatgatttg
wcaaatasctaagctagattgaactttgcttcctggccttcwccagtgtcctaggcagtccttgagccga
ccctgggcttggaattcagtaagaatgttacycattcagtcaaaatgcctccagtgttgatagagagata
gtgaaagaaatcaggcattacagtttgccggataggagctagaaatctcagggcwagttcaacaaagtaa
actcagaattctcattacagwcatgaatggcagcctacattacataatagtagaaagaaggtgggttgtg
gtttaaggaggaactagagtattgtattattcatgaaagagttagtagaacagaactcccctggtgcatg
tttttcactaggcccagaggaatagcataattaggtatttactaagggacccctggtggtgggtttaaca
atagactagcattgcacctgggtgttagccttttcacctggctcctaagaatggctgattttagatagag
ctgttnttgtcccagttgtaaatantgcccggttcccgtcaccttttatgtwtgcattcctctgttttgt
gtaagagtcattaagcatccggtaacctcattgtaccttgctgatgtgtcacctaacttccctattttct
tctgtatwaaaagtytgatgctcgatttgacaaattacattcagatacacactctctctgtgtccatgtc
tgtttgtcattcatcgccgactccttgcccacctgtataccgagaccctgattcmcacggatcgaggagg
gcccactgagcccagtctgcggca
>RLTR13D|RLTR13D  Long terminal repeat of retroviral-like element.
tgctacacccactccagtgaagtctgcctgacaggcccaaaagcctggacacagtcccgaggcaaaaagt
ttcacggaaacttagtctcctggaaccttggcatcccgtakcacgaatgctccaaacttgtccctgcgtt
agttggtgaatggatctgcgtgctttcyttcagtattgttttattataggtgcctccaaggaatgatttg
wcaaatasctaagctagattgaactttgcttcctggccttcwccagtgtcctaggcagtccttgagccga
ccctgggcttggaattcagtaagaatgttacycattcagtcaaaatgcctccagtgttgatagagagata
gtgaaagaaatcaggcattacagtttgccggataggagctagaaatctcagggcwagttcaacaaagtaa
actcagaattctcattacagwcatgaatggcagcctacattacataatagtagaaagtgactatcactta
gaataaaagccgagtcgctcccatatacaggaatttacaatggtttaggaagtagatcgggctgtggttt
tagagtattgcattattcatgagaaggttagctagagcagaactccctaattagaaccatgacttgggcg
tgaaagcccttgccctgggagtgtaaagacctcacacctggctcctaagaatggctgattttagatagag
ctgttnttgtcccagttgtaaatantgcccggttcccgtcaccttttatgtwtgcattcctctgttttgt
gtaagagtcattaagcatccggtaacctcattgtaccttgctgatgtgtcacctaacttccctattttct
tctgtatwaaaagtytgatgctcgatttgacaaattacattcagatacacactctctctgtgtccatgtc
tgtttgtcattcatcgccgactccttgcccacctgtataccgagaccctgattcmcacggatcgaggagg
gcccactgagcccagtctgcggca
>RLTR14|RLTR14  Long terminal repeat of retroviral-like element.
tgtaacaggcccccagaccttagcacaactgactccatgatggaagtaccattcaggccgtaaaactcag
cacgtagacagcaccacctgccaaaacgaaaacaaagacctaatccatcaaagtccatagttctgggaaa
gtctctaaatgtactaaccttgctttttggcttctgtagttctgcttctggctaactgttcttgttaact
gaagtatgtcaacccaggatatggtttttgtgcttaaaagctcaccctgagaaaggctcagggctacact
gggatcccaaacacccagtgtagtcaccagccggctaataaagactttctattggcttaaacccatgtcc
gagcagtcttctccggtggataccccacaaca
>MMVL30|MMVL30  Internal sequence of mouse VL30 retro-element.
tttggtgcattggccgggaaacagcgcgaccacccagaggtcctagacccacttagaggtaagattcttt
gttctgttttggtctgatgtctgtgttctgatgtctgtgttctgtttctaagtctggtgcgatcgcagtt
tcagttttgcggacgctcagtgagaccgcgctccgagagggagtgcggggtggataaggatagacgtgtc
caggtgtccaccgtccgttcgccctgggagacgtcccaggaggaacaggggaggatcagggacgcctggt
ggacccctttgaaggccaagagaccatttggggttgcgagatcgtgggttcgagtcccacctcgtgccca
gttgcgagatcgtgggttcgagtcccacctcgtgttttgttgcgagatcgtgggttcgagtcccacctcg
cgtctggtcacgggatcgtgggttcgagtcccacctcgtgttttgttgcgagatcgtgggttcgagtccc
acctcgcgtctggtcacgggatcgtgggttcgagtcccacctcgtgcagagggtctcaattggccggcct
tagagaggccatctgattcttctggtttctctttttgtcttagtctcgtgtccgctcttgttgtgactac
tgtttttctaaaaatgggacaatctgtgtccactcccctttctctgactctggttctgtcgcttggtaat
tttgtttgtttacgtttgtttttgtgagtcgtctatgttgtctgttactatcttgtttttgtttgtggtt
tacggtttctgtgtgtgtcttgtgtgtctctttgtgttcagacttggactgatgactgacgactgttttt
aagttatgccttctaaaataagcctaaaaatcctgtcagatccctatgctgaccacttcctttcagatca
acagctgccctgcctcccactccaactccagagagcagccagcgggtcacagtggtcccgcccatgaacc
tggagcctagggaaaaatgagctcggaaatccggagcaaatgaggagtggtccctgagaagtcagtggcc
taaatgttgtggctgctgaagcaaaagaagaggaggctgttcgagtagccggccaagagcgccgcgggtt
cccaggcagcttctcattcccctgtccctcccatcccgtctcttgttaacagaaaaactgctttcacttt
gagatatgagtggcccgatacagccagctgtgagagctgtactcccttccctgccccacgtgttttctct
tctcaggcgacccctccctgagctgctggcagtgagtctgttctaagctccagtgagggaggcatccgcc
cacttggggcttctgtccaaggtaaggagcacctgtgagtctaactgccaggctctgatgggggtctcgt
ctctgtgggactagaaagtgtcccaacaatctgaccaaggtaacaggaagttaagacaaagacagagacc
aaagtcagaatcagagctgtgctgtgagacaaaaagataaaaaaaataaaatgctggccacaaaagtcag
gaaaactagaaaacttagatagtacctggcaacaaaagaaagcttttggctaaagatcaacgtgtatact
gtaaagaaaatgagcactgggtgagagactgccccaacaaaaagaagaggagcccccctcatgaccaaac
ccttcacctgttcgtggctaaaagtaaagagataacaaaaggggtgctaacacagaagctgagtccttaa
aagagtccggtggcctacctgttgaagcagctaaaaaagagactgtgtttcatactcctccactgaccag
tgcaaaacaagctaaaaagttcctgggcactgcgggcttttgcagattgtggattccaggttttgctgag
ttaaagagataaacagcccttcgtatagaaaaataaaaaacaaccttggatgtccttggatgctattgag
actgccctaatgttgtccccagctatgggactcctagatgtgactgagaacaaaggtattgccaaagaag
ttcttactcagagattgggaccctgaaaaagacctgtggcatacttgtaagaaattagacctggtggctg
taagatggcctgcttgtctgcacatagtggcttctggtcaaggacgcagataaattgactctgagacaaa
acttggcacatgtcctagaaagtgtggttcagcccccatgaccgatggctgactaacgctcttgaaaaca
ttatccaactgttcccctgaccgatggacacattgtcagagctttttttgactgaacgagtgaccttcgc
tccccctgctatcctcgatctcactactgcctgagacttcacctactcatcattgtgctgacattctggc
agaagaaactcatactcgaaatgatctgaaggatcagatcagccttggcctgagagtttgagctggtaca
cggatggcagtagcctggaggttaagggtaagcggaaggcggggacagcagtgcagtggtggacagaaag
caagtgatctaggccagcagcctccctaaagggacttcagcccacaaagccaaacttgtggctttaatac
aagctctgtaaatggtaaaaaaaaaaaagtctacacggacagcaggtatgctcttgccactgtacagagc
aatatacagacaaagagaactgttgacatctgcagagaaagacctaagatgctgtggctaaaagaaatca
gatggcaaatctaaccgcccaggcatcctaaagagcaatgatcctgacagtctgaagactatcaagttat
agacaaattaagactggtaaaaaaaaccctgtataaaatagtaaaaactgaaaaaagaaaactagtcctc
tcatgagaagacagacctgacatctactgaaaaatagactttactggaaaaaatatgtgtatgaatacct
tctagtttttgtgaacgttctcaagatggataaaagcttttccttgtaaaacgagactgatcagatagtc
atcaagaagattgttaaagaaaattttccaaggttcggagtgccaaaagcaatagtgtcagataatggtc
ctgcctttgttgcccaggtaagtcagggtgtggccaagtatttagaggtcaaatgaaaattccattgtgt
gtacagacctcagagctcaggaaagataaaaaagaataaataaaactctaaacagaccttgacaaaatta
atcctagagactggcacagacttacttggtactccttccccttgccctatttagaactgagaatactccc
tcttgattcggttttactctttttaagatcctttatggggctcctatgccatcactgtcttaaatgatgt
gtttaaacctatgttgttataataatgatctatatgttaagttaaaaggcttgcaggtggtgcagaaaga
agtctggtcacaactggctacagtgaacaagctgggtaccccaaggacatcttaccagttccagccagag
atctgatctacgtacacctgcgtcatgctgagaccctcaagcctcactaaaagggtccctgcctagttct
gtttactaatctgccttattctgtttttgttcccatgttaaagatagagtaaatgcagtattctccacat
agagatatagacttctgaaattctaagattagaattatttacaagaagaagtggggaa
>MMETN|MMETN  Internal sequence of retrovirus-like sequence.
[encoded data, 4970 characters]
gaga
>ETNERV|ETNERV  Internal sequence of endogenous retrovirus.
ttttggcgccggaactgggacctgaagaatggcagagagatgctaagaggaacgctgctgtggagctcca
caggaaaggatcttcgtatcggacatcggagcaacggacaggtacacatgctagcgctagcttaaaattt
cagttttgtaaagtgttgctgaggatgcggtaggatacgaattaagcttgaatcagtgctaacccaacgc
tggttctgcttgggtcagcagcgtgttaatcggaactagaaacggaaacaggcaggttagccgcagcttt
ttaggaagctgcttaggtggaagaagaaagggtttaaagtcatggatcaggcggttgcccatagttttca
ggagttgtttcaggccagaggagtaaggcttgaagtacaattagtaaaaaattttttaggtaagatagat
agctgttgcccatggttcaaggaagaagaaacactagattgtggaacctgggagaaagttggtgaggcct
taaaaatcactcaggcagataattttaccctaggcctctgggcgctcgtaaatgatgcaataaaagatgc
cacttcccctgggctaagttgcccccaggcggagcttgtggtatctcaggaggagtgcctgtcagagagg
gcctcctcagaaaaagatcttcttaactcaaaaattgataaatgtggaaactcggatgaaaaactgattt
ttaacaaaaatcactcagatagaggagctgcccattaccttaatgagaattggtcctcttgtgaatctcc
cgctccacctgtagtccccacttcaggaggtgccacacatagggatacacgactaagcgagttagagttt
gagattaagcttcagaggctgactaatgagcttcgggaactaaaaaagatgtcagaagcggagaagagta
actcttctgtagttcaccaggtgccgctagaaaaggttgtgagtcaggctcgtgggaaaggacagaatat
gtctaatacgctagcctttcctgtggtcgaggcagttgatcagcaagatactagggccagacattaccag
accttagatttcaagttgataaaagagttaaaggcggctgttgtgcaatatggctcttcagccccattca
ctcaagcattactggacacagttgtggagtcacacttaacccctttagattgaaaagactctttctaagg
ctaccctgtcaggaggagattttttgctttgggattctgaatggcgagacgccagtaagaaaactgctgc
ttctaacgctcaggctggtaattcagactgggatagcaacatgcttttaggagagggtccatatgaggga
cagacaaatcagattgattttcctgttgcagtgtacgtgcaaattgcgacggccgcacgccgtgcttggg
gaaggttgccagtcaaaggagagattggtagaagtttagctagcattcggcagagttctgatgaaccata
tcaggattttgtggataggctattgatttcagctagtagaatccttggaagtccggacacgggaagtcct
ttcgttatgcaattggcttatgagaatgctaacgcaatttgccgagctgcgattcaaccgcataagggaa
cgacagatttggcgggatatgtccgcctttgcgcagacatcaggcctcccaccttgccttcaccttattt
gtcctaaatttcttgcacaccgatatcaagggccagtctgcagcggatcgccactggcatccagttactt
ctaattcttatgcattggtaaaatggaaggaccccctgactaatgaatggaagggtccaaatccagttct
aatttggggtaggggctcagtttgtgttttttcacgagatgaagatggagcgcggtggctgccagagaga
ttaattcgtcagatgaacacagattctgactcttctggtaagtatcattctaaagactaaaattcctttt
gtgcttagaattcagctgagagcgaaagctcccaaagctgttctccagctactctctgagccagctccca
acaggaggcccggagactagcctcagctttacaatttgcatttgaataaagtacctagacttccccgaaa
gaagttctgctttcctactttctcactgtcgagaatttgtcttacaagcaggtaaatcaacattctcgaa
gcggaccagcggatgtgcatccccgcccccctagagcacacaggtggctgctgttatctcctttccaagg
acatttccagcacgtggctttcagtctgagttaaaaattaggtttaccaagagggctagaagagtagata
tttctatattaataaagattggtttttattttgatagacaggcttagccccttagctgacctctggcttt
tcacccttgctgttactgcaaggtgtccttagctcaataaggctgtggaaaaaacagggatgaggaggaa
cgacttccagctcctattttagccacaaatcgtggtgttactaaggacataattcttgcttaggctttgc
taaatctgaggttgataattctcctttaggagcactcagaactgtgcatactggtttgtgatcgtacaaa
ttcagtatgggcatcgcttggtgcagaggcactgcaggggaaggtccagcttgaccatttctgagtttcc
tgtgagataaacccggtttgaaagaggttggtaccaaattttggctaaaaatgaaaaatagttttcggct
ctgcctcacctccccaaaaggtacccagagccacaggtgtgggtcttaacagtacccacgggaagaatcg
ggtcaatgtccacccaagccaaggttaaaagcccactcatcaacggatgagaaaatcatttgatcacctc
agttaagcgctgccttatttaacttaattaataggggggagagagattggagacgtactattgaaagggc
aagcccttcactgcctcccacccaaataaaaaagccaattggctttgtactacagagccggccgaacccc
ttctccctgtttcccacctatcatccaaaaatgcggaggtcaactagaaagttacctaccaagtactaat
tagcatcttaaagtcagagcctgcagctccaggcctttcagttagttgtttactaagaaaggacagtctt
aagccagatacagtttaccataagaaaagttaaagaatcccagtgaagcaggttttttctttagccctag
attccaggcagaactattgagcatagataattcccccccccccctcaggccagctttttcttttttttta
gttttgttaataaaagagaggaaa
>MYS1_LTR|MYS1_LTR  Mouse mys-1 transposon long terminal repeat.
tgctgtggatatcactctatgtaaataaaacactgatggccaatgaccaggcaggaggtaggtgggacaa
ggagagaggagaattctgggaagcgggaggctgaggaagagagactgcagccaccgccaggagaagagca
tgtagagacgccggtaagccaccagccacgtggcaagctatagatttataaaaatgggttaatttaagat
aaaagaacagttagcaagaagcctgccacggccatacagtttataagtgatataagcgtctgagtgatta
ttttataaatggattgtgggactgcggggcttggggaacctggagagaagccctccagcaaca
>MYSERV|MYSERV  Internal sequence of retrovirus-like sequence.
[encoded data, 6603 characters]
ctgtwagagaaagaaccttatttgaacaaaaagggggaga
>RMER1A|RMER1A  Medium reiteration frequency repeat - a consensus.
tgstcccaccacctggggcagncggaagagntggccccggggttatgagagtaggagagctgtcgccgcc
cctcgccagctgtagcactcaggagaknagccctgcacctcccctgggcagcacagtagatctggccctg
gtacagggggcgcagatgaaccggcccggaggacgtgagctcaggagagctggccctgcnactcgtctgc
atgaggtggcatgaggtgcggngtgatgccctcctanntcctctcccaccactcgccacctgcggcagcg
gggagagctggccccaaggtcatgagagcwggagagctggccctgcccctcactggctgcagcacttggg
agagcaggccctgcacctcgcctgggcaacacagtggagctggccctgntggcgwrggcatgggtgagcc
agccccgagggtgtgagagcgggagagccggccccgccccttgmcgatggcggcnttgggtggcctagcc
agagcagtgctggagagctcgccctggtggtgcagataagggaaagccggcaggctgaccagctcagcta
ccacccaggcccagatccagggctttgagttggcccaccccaaaatctacaccatctgcgaactgctgga
gtacgtgaaggggccagtcctgctgatccaaagctgcaggatctccatgacacagggcaacaacaggata
accaagaggagtcccggtgaggatccagtattgatggtgtcacagaagccagaggcctcgaaccagacca
atgactcattgcaatgaacatttgcaagtaaagatgtgtggacaaaagggtatactttgggacacactgt
gacacactacagcttccactataagatgtttcatgtactgttttgtttatgttgtttgttttttggtttg
tgtatgcgttattttgtggtggaggttgcaagggtagagggcagatatgaggggatggggagatgagtgg
gattggggtacatggtgtaaaactcacaaagaatcaataaaaagttttaaaaaaaaa
>RMER1B|RMER1B  Medium reiteration frequency repeat - a consensus.
gcgggcagangtcacccaggggccctccagccacatggcccgcccgcagcgggagccactacgatgagca
agtatgtggtggagagatgggagagaaagagaagcagagcggtttgagcactatgaagagaggcggaact
ggagacgtgagggcagtgaggaacagcctgatgtgagtagcctaccctgccacctgaggccatggtgatg
tcccagcctgtgctgccactcggggccgcgtctgggtccatggctacacmgcagcaggggtctgtgtcga
tgtctgtggctcatrttaccactaaaggccatgcggatgtccctggtctgggctgccacctgaagccgtg
ttgatgtccatgagagcwggagagctggccctgcccctcactggctgcagcactttggagagcaggccct
gcacctcgcctgggcagcacagtagagctggccctgntggcgwrggcatgggtgagccagccccgagggt
gtgagagcgggagagccggccccgccccttgmcgatggcggcnttgggtggcctagccagagcagtgctg
gagagctcgccctggtggtgcgggcgcaggagagccggcgggctgaccagctcagctaccacccaggccc
agatccagggctttgagttggcccaccccaacatctaccccatctgcgaactgctggagtacgtgaaggg
gccagtcctgcagatccaaagctgcaggatctccatgacacagggcaacaacaggatatccaagaggagt
cccggtgaggatccagtattgatagtgtagcagaagccagaggcctcgaaccagaccaatgactcattgc
aatgaacatttgcaagtaaagatgtgtggacaaaagggtatactgtgggagacaccacagcttccacggc
gagatttgttttttctttatttttatttttatttttttttgtgagggaggttgcaagggtggagggcaga
tatgaggggatggggagatgagtgggattggggtacatggtgtaaaactcacaaagaatcaataaaaagt
tttaaaaaaaaa
>RMER6A|RMER6A  Long terminal repeat of retrovirus-like element.
tgtaaawgtawcttttattctcctgatgtaattgtcgtctccgaggcttactgcctctgtctgctaacct
aggcctagtcctggaagcttctagcctccgtacaatctwatctaggcctagaatgttttcagcctctgag
acttgctgctgaataagctcaccctttctagttctttctgaactctggctggctggttcaactcagctgt
tctggctcaaactcctctccaagctgactgattcaatctggcttctctcagcttctcactgaattgctct
gcttggcctcaaactaactctggcaatctgttctaatcttctggctccttctcattctctggcttgttct
gtcttcacctgtgtctagctcgttctctcttcagcctgtctctgtaaaactctcccggtaaaactgcctc
cttctcccctctgtgctgttccactgtccctnnnnnnnnngtactgtctgtctcttctctaagtagcttc
cctttcctctctcttcttctgagagttgggcatatcctgttctgtcaaatctttctctgattcgtcactt
tgtctgccactcaattagacatcactttcaaacatgggtgcttccttctacaaactaactttaccttcat
tgtttgggattaaaggtgtgtactaagggtgtgtctgtattccagccagagggattaaaggtgtgtgcta
agggctgagccacaccacaactagaaacaggtttttcagtaaataacacaatctcagggttcacagtgtg
atcaaatatcctgcaaca
>RMER6B|RMER6B  Long terminal repeat of retrovirus-like element.
ctaacaaaatctcaatcgtttgattttaccaataaagnctcaggagccagatgctggggtgaaagcctgc
tagctcagagaggcagagaaagcacccagctgaccttcctcctcagccsacatcccaaaaggagttctcc
ttctccacaccatctcaaaaccccttcaaactgaatgtccctcccttctacttcctgtgtgtctctctat
ccgtcctcctgactccctcttactctctgctttttttttcttatgttcactccctgtcaactggttgctt
gytctgcctcttgacctatggttgactttatttaatcctgtttacaataaacagaaagctcttggattaa
aggtgtgtgctggggctgagccacaccacgactagaaacaggtttttcagtaattaacacaatttcaggg
ttcacgatgtgatcaaataccctgcaaca
>RMER10A|RMER10A  Long terminal repeat of retrovirus-like element.
tgtttggtttcgaaccccggacaaggggctgaggtgcatattttacatatcaaagcagacctggcctcca
ggttctcccagcatccctcagtccctacctggcataccccgcccccaaccctgaactttccagcccaggg
gctgggctgcccttcccccagaggctcttccctatataatccagacattttggtctccccgttctctctc
tgcacatgggcactttctcttccctcctccctcctaccccgtccccatggcgacttccctggcctcggtc
cttggggccagtgaactcacccgagagcagyttcccaataaacctgccttcaatataatctaatctggct
tgaattggctcatttcaccggcggagaaataatttatca
>RMER10B|RMER10B  Long terminal repeat of retrovirus-like element.
tgttaggtctcaaacccaggacaaanggctgaggtgcctatttaacatatcaaagcggacctggcckcca
ggttctcccagcatccctcagtccctacctgttacagggtatggctggcataccccaccctctaccctaa
acttctccagcccaggggctgggctgcccttcccccagctgctcttycctatataatccagccattttgg
ctacctgctccttttgtncctttggcctcctggctgctgtacctggttctgctctctcccctcttccttc
tcctccctnctctcncccacwtggctcagggtcatgtccactctggactttcccagatgtctctatgtct
ntggctatgttctcccytttatctacaataaactttctcctccaccatacctaggagnagccatgtcctt
ccattttattttttttttcattca
>RMER12|RMER12  Interspersed repeat.
tgccaagggcctgccccggctggaatgggctgaagcgggacacagmattggatgacgacttaaagactga
tggtccctggccttntagctctctccaactgtatttggkgctagawgctgctggcttctggaaaatctta
acwctctcttgcttattctgwggctaaaaactgmtggctttctttattctataactctntgctttataag
cattataaccctttttactttctttaactctctgtgctttaataagcactgggaacttaactctttctta
ctgttctgtgcttaaataagcgctaaaaacgtaactatgcttaaataagcgctggcctcttccgctgtac
cttcttattatttgtggttaacttggtgctaatntctggtgattaacacatgctgtntagcagcagggga
ttaagtgaaaggatttattgctagtgctcttttctctggtgagtcagccagaagcctctctggctaagct
ggttaactccttgtgaaacagagaggaaggaaagaagaagacttaagatacnnnnnnnnnnnnngaagat
acaataacagctacaggctacactttatttcttttctctggtcttttatagcttcttagacaaaaagttc
tttagaaaattacctcatagataaaatgttacacagaaggggagctacagaaggatgttgatagtaagtt
caaagcagtgtttcattctataagctcattataagttcaaagcaacattttcacatggccttgcttmatc
atagtgcacacctgtggcttyatccttggacctgacctagaatgaatgtttttccttgancataaatttg
tcccaagcctatttctctttttagtgcaattatgaaagctcattgtattccttwttatgcagcttttact
tactattctatgaggagtgggcacattctattcttgattctaactttattacatctttctggcaaaacaa
ctaaaaccatctccttaaactttcttcctaaaattatttgaatcaaatcaggaattctataaaatcatta
attcatctaaacagcattaattcatgaaagttcatcttcatgttgatctgcaggaaatctgcccaatagg
gtgggctgatgcccaggaatcattaggctatgtaatagtggcaggaaaggcatatcagcagcaagaagca
atcctgggatgaagtctcttggggccttgcctctcagagctcacccatcgcagccatgcaaaatggtggg
ccatctccaggaaactcacttgcttgccwtagcctttcctagatggcttctgtca
>RMER13A|RMER13A  Long terminal repeat of retrovirus-like element.
tgcttctgggatgtgggaactcagctgggaagacaggatgtngaacactagactgcacttatcctatgct
gctgtcaggtgctaggcttgagcgaagccccaatacactgctcaggaggtgggaaawtgtagtctaagat
ttgggaggctaaagctgggattccctgactcccgggcgtccagttaccgctggaaaccgcacagaggagt
cgaaatggagggwmgtgggtccccggggcctgcatgaggagcccgtgggccccacgggggctcccaaact
cctgtacgtccngtcggcactgtgtctcggggagttaggaatagaattgggggtcctctggctgagggtg
acggtgagcccggaaagctcatagaggagtgtgcttggcttggcggcggccgcsgctkggagtgcagaga
ggccttctgcaggagacttaggctgtggctctgtagwcgaaggccttctccgtgctccccackgcggttc
ttgatgaaagagacagtccttggttccaaactgtttattgattgttcatcgtggaaaatggatgcatacc
acctyctcagggtggaccagagattaaataccttttgcagggaggaatgtctgggaagggaagcttattg
gctaaaccctcagggcctctaggtacctcattagcatggagaactctgttctgggctacgtgaccacagg
tcatggttcctatgtgggaagtgtggcatgtgtcccgggacagggacctggymgggagcaggtgargcgc
ctaccatcctcagmtaggttcctgggtncccgggtctcngamcctgctcanccttaccaagtttcctggc
aykgtccactgtcccaca
>RMER13B|RMER13B  Long terminal repeat of retrovirus-like element.
tgtagaattaattgtggggctccctgaatcagctccaccacagcgttctggaggcaggggaggcaggatg
taggaggtttgactgcacttaccccatgctgttgctgggtgggtgtcaggctgtagcgaagccccgagac
actgctccaggaggtggggaagcacagtctgagatccaganacagccagagctgactcaccgtccctgga
cctgcaaagaggccgggaccagctggttctcaggcctttggacacccgggaaccactaggatgcagagga
agagctgagaatggagtggggggctgtggaagtggatctagcccagggctgagggggaaagagagggmgc
tnmagctggtcccgcgggagtagtccttggctggtcagcggcggtgkgcttggcttggcggcggccgcgg
ctkggagcacagagaggccttctgcaggagattagacggtggctctgtaggcgaaggccttctccgtgac
tccccatggcgggtcctgatgaaaagagacagtccatggtttcaaggcgtttattgtcatggcggaaagt
ggatgagtaaaaccntaccccacttctcagggtggacctgagattaaataccttttgcagggaggagtgt
ctgggaagggaagcttattggctaaaccctccaggcctttaggtacctcattawaatggagatctgtctt
gagcctatgtgaccacaggtcatgtcctctatntgtgaaggggcttkgggcgttgcccttatgtgactga
tggccacaaatctatgggggcctatgggttagtgaccaccctggtttcctgggagtcaggtgaaacttca
gggtctccaggattcaagcctccgcaactgggaaccagtatgtctttcactgtcccaca
>RMER15|RMER15  RMER15 interspersed repeat - a consensus.
gtgttgtgtgacagtacttttcctggggagacatgaacaaacgtctactcaccccagatagggaaccaac
gacagaccaaagtamggataccacccaagtccagcttggtgaaccaatgagtttwattggggttacttac
aggaatatgggtgaggggttacttacaggagcagaaatgactcaaagacagctgccwcaccaaagcccac
cccagcatgggtgacagctcacaaaagctgggaacctggagcacactgcacarcctgcaggcagctcaac
aggttggagagtgtcctttccaggcgcctcagctggtctragcctcttccaggcagctcggctggtctct
gcttcttccgggcagctmggcttgtctgagagtgactctcagcagtctttactgyttatatackcttggg
gagggaggggcctagtgaatctggtcagtttcagggacttcctgaagctattttgagttgtttacttcct
gatcttaacgagcttccctgcaggatggaatgtttcaccttctcgntagaacttcctakgtcctaaggag
acttcc
>RMER16|RMER16  Long terminal repeat of retrovirus-like element.
tgttgagggcttttggtgccgcttctaggaatttggcaggaattcgtcattgggccaggacacggaagta
ggctcaggcaggaatatgactttgggctaggacaaggaagtaggctcagatatcttggtcatcctgataa
gcccttagaaacagtgatcacgggacttttattgccttgcttgttccttgactgtttgtgtttattgcac
tgctttaccttattatttgcatgtacctaaaatgatataaaagcagactggggagaaataaacctgcctc
agcctcagaactggctggggtcatgctacartgttgtctaattntccttttttcttttcaatcctcactc
ctgccctggagaacctgttgactgactgagctggcttggtca
>RMER17A|RMER17A  Long terminal repeat of retrovirus-like element.
tgtggggaattgcaggctggtntccagttgagctgaggtctgaaccccagtggtgataattcacctacat
gacacggtaggcattccctcatgctcctggaactctggctcctgcctaagttaccgccccccacagcccc
cacaagagaagcatggttagtagtcacgcaggcaatgtcccaagcttctgaccttcaggctagactcctc
cccagttacctagcaacwgtaaagaccataagaggggctgctcggcccctcctcgctctcttacttgtct
cttctcttactcctttgttctcttaactctcacacttctttctcctcttccctttctctttgtcttctct
cctctctcctttctctctactcttctctcagccttctctctctctctccctctccctccctctctcctct
cttatacccctgcctttctacaataaagctctaaaaccatagagagtctctgctcatcaagatctgctgg
gctcactctcgtcagtgttgggaacctcttcccccatccttctctcccataaccctggtggctttagsaa
agtagctctggggcccccaggtagggctgccccttggccaccccccgaagagtgggtcagaggcttagat
gcccacccagggatgagtggaaggtagatagcagccctcccacnnctgactgaccagagaacaggtggaa
ctctggcggggtgtgggtcttccccttccccctcttccccagggccccccaccyytttttgctcccaaca

>RMER17B|RMER17B  Long terminal repeat of retrovirus-like element.
cagggtctgtgggactgtgawaggcagcctattttggttgaatggggcttgctctggcgacccagtagag
aactctacaagggatggaaaaatgagccaccttccagaatcaagtacctgaaatcacagagnncccagct
ccataattctgtgactatcagtcacgcagacaatgtcccaagcttctggcattctggctagactccaccc
ccacagccacctgactatagccaggtatgctcctccccacagttacctggcaacagcaagatagcccagc
ccactataagaggggctgcttggcccctcctcgctctttttaagctctcgcctttcttactctcmtctct
agccctccttctctctctcccctcccccctctctccacgtggccatggccggctctctctctttctacct
tctctcctttctccctgcctttctacaataaagctctaaaaccatagactgtctctgwtcatsaaggccc
gccgtgcttgaacwgtsatgggataggctttctcctaatgagccgcatctaacctcccgccagaaggcct
tcctgcgctccagctacggaccagaccaaggactctcscccgagtgggaaccacccagcgccctctcccc
cagccctctcctcctttcatccctggggccaagtgccaccccgggcccctattctgttctctgttccttt
gctgtatccagcctgggatgtcggaggccgagaatctggtacctggggctgccccttgtctaccacccgc
tgtgtggggttagtggcttcctacagcagacacccaccgggggccgtgtggaaagcgtgaacagtcctcc
tccgaccaccctcccagagcactggaactctggcgggacgcgggctctctcccatccccctctttcccca
acakccacggcccwgcaa
>RMER17C|RMER17C  Long terminal repeat of retrovirus-like element.
tgttagcattctgtctaggctctgccccacagttacctggcaacagccaggtgtgcctgactcactataa
aaggggctgtttggcccctcctcgctctcttgctctcgtctctcttcctctcctctctagccctccttcc
ctctctccccccccctctctctccacgtgctcacgggcggcctcttctctctctctctgacactctgtct
ctctctgcctttctayyyyyyyyyyyyyactcccctccccatgccctgaataaactctattctatactat
actgtcgtgtggtggctggtacctcagggggaagggatgcctcagcatgggcccgcmgaggcacccctcc
cmccwcaccwtaccacgcctccacmaaacatatccttctctctttatttttataaaacacaaca
>RMER19|RMER19  Long terminal repeat of retrovirus-like element.
tgtaggcttagatttttcgaaacctanttttaataagggttcttaaacgcttcaacctctcttctagccc
accacccaccagaggtagtggaagagaaaggttattaggatatgggggwagtggacctgcttagcaatag
ttctttaggggtgagcccaatcttcattgkcagcagttcagtcccgtagcaaacaccaaatatgactcag
cagctgcagatcagtcctctaggcaggcagacaccaggcacgaaccagcagctgcagtccagtcctctcg
gcaagcatgaactagcagttgcagttcgatccwgaagaaaccgcaaggctctgccaattggcstaagtcc
gcggaagcagcaaagaagctgcaggaacmtcacaagcagttctttggcgagtttctctctatgcggtagc
gtcaccgcaagtkgagcccaacaacgctatgcaaggcgaaccaatacatgggtgtcgttagcaaagaata
gcgaggcagagcaaaccaaagctcagtgctcgtctcccactgtctgtggggtcatatttatactccttcc
aaacatcawgcgtcctttcacgtgtctgctmtaacmaaacatcctytcacctgtgtctgcttcaggaaaa
cagtctttcacgtgtttgcttcagcaagacatcctttcacctgtgtgccccggcaaaacatcatttgaca
taactgastttccaaagaaacyagaartttccacttca
>RMER20|RMER20  RMER20 interspersed repeat - a consensus.
tgttgggaaaccctgctacttaaggtcgmagwctaccatgtccagatagctcctctgagctcggtgcaaa
atggaggactccctttwccagcagggcttccccttctctgmccttgtctggggagcccgacctccacacc
ctctacctgaggaaggtcacgtagctgttggcaaacctacaggttcaacttcctctctcctgataagaac
ccgyccagcaagtacctgggattcctggaatgcctctccatgcaaatgaggcattcccagtaccttaaac
tccagccaatgatktacattcaccctgaaaactccttcccactctccaaggttcatatatagcccttgtc
cacctgaataagtgtatgcgcacaa
>SATMIN|SATMIN  Mouse minor satellite DNA (a consensus).
cggcattgtagaacagtgtatatcaatgagttacaatgagaaacatggaaaatgataaaaaccacactgt
agaacatattagatgagtgagttacactgaaaaacacattcgttggaaacgggatttgtagaacagtgta
tatcaatgagttacaatgaaaaacatggaaaatgataaaaaccacactgtagaacatattagatgagtga
gttacactgaaaaacacattcgttggaaacgggatttgtagaacagtgtatatcaatgagttacaatgag
aaacatggaaaatgataaaaaccacactgtagaacatattagatgagtgagttacactgaaaaacacata
cgttggaaaccg
>YREP|YREP  Mus musculus Y chromosome repetitive DNA sequence.
gaattctatggatatccagatttcaatagttttcacttcaaaaaatatagttaaaaaattccaaatgtac
atttattttcgtatttctggtcaacattttcctactgaagtgacagaaatatttactatttttatatctt
tatactaacattatatttctgtttaatttgtaggggacaggtttatttgagacagtcctacattactcat
gctgaactcatactcactatgtagctatggacagtcaaaggacttgatcctcctgcattcaactgccaag
tgctgggattacagattacaggaccatagctattaaaagattttcaatgactgataaaagaggtgaggat
ttgactttaggatttcggtatttttctaattgtagtcatagtttatattgaatagtcattaggtgaaagg
taacagagattctggtctttcagatttctactcattagtaggttagttaatacatttaaatatctgctaa
aaatgtcatggcatacaggagaacagtagtttaagatcttgcctagggtggtttcttatgtttaaaagat
tcagtaaataggagtagatttatgagtttaacatgaatgagcatgtcttatctaatttgccaatgttata
cataatactacaaaacataaattttaagtttttagaattattttcctcaaaacatatatatttttgacca
aatgagctagaattactcataacaaatatttaatattataaaaagcctaaatttttgttgaaataaaatg
aaacttgttctgttgaatttattgtagtctgttattttgataagtatttctgaggtttttagagatctaa
agacaaaatattcagtgtatttttttatgataatttccaagtaagttagtatactgagactaggctggta
agccaatgcccacactacaaagaggttctagcttttggtctgtaaatgactacaatgttttttgccatgc
tatgaaaggtttaaaaattgccttcatttggagtatttatttaatttttatctgtagtccctatctcttt
cctgaactgactcataatggcaggaccctccatgtatttcgcaggcagaaaatgatctcctgttcatttc
aaattgaatagcccccaaacaattaaccaaccaaattaaaaaaaaattgttaatatggtaattgcctcag
atcttacttggaaaccatttgatgactacagtgattgttatattaatggggaaatgatctaaaatagttt
ggtgatattcttccacaggagtattttgccagggttgttaggaaagttttttccatacactttttttttt
taataaatagggactaagtttaggattgtaaaaactaatttgctactttgagttggttttctaaaataaa
cgacagagtccagatgacaacagtaagtaatctttctctatctttcaagtatacctgaggctgacatatt
gtaaaagctggtaatcctctcttcatctctcagcaaatgtcggcctcttggaaatttatgatctcgtctc
cattaaaattcttagtggttttcattggtatagtatatgatcatacctctctgatttacaattcagtagg
actaaaacagaaccaaaaatagttagataatgagaattaatttagtttcatgtgtcaaacacaaggctgg
tttctcccttcctaattgatacataggtatacgaggttaattatgaagttatttattataccaaccactg
ttttttcttgttctttattgaatttctttttttttacctttaaaaatttttattattattat
>B2L_S|B2L_S  B2-like retroposon from Sciurognathi - a consensus.
ggggctggagagatggctcagyggttaaggcgcttgcytgcaaagcctgaaggcctgggttcgattcccc
agyacccacgtaagccagatgcacawagtggcacatgcatctggagttcgtttgcagtggcaggaagccc
tggtgtgcctatactctctcactctctctctgcctctctctctctcaaataaataaataaaatattaaaa
aaaataaaataaaataaacaggtaaataagaaggaractactga
>NICER_RN|NICER_RN  Rat NICER element (GL5-14) 3' long terminal repeat.
ggaaaggaaaattatacagatttaaggtttaaaaatatgaagttaaaagagtatgtttcaactcaggact
aaacactgtgaaaagcaagtccagacagccccgccctgccgctagaactaacagaccataaaaggaaagg
aatgcagaacagaccaggagtaccggacctgactcacaggccacctggcaggaagagataagcccccagc
ccccgacatccaggacgccccaaagctgccaatgtgtgtagctataacttattacctcatcatgtgaaat
agccaatcatatgtgaacatgtctttgtgcctcgtttgaatccaccaatccccgtaactatgcatctgct
tctgtacgcccacttctgcttccccaatccctataaaatccccatgctggagctgctgggtgcgcaagtc
ctccgaagagtctgtgtgcccgcaggtacctgtgttttccaataaaccctcttgctgatggcatcgcagt
ggactcggctcggtcattggggcttggactcctcctgagggaaggtcctctccgggggtctttca
>CHESHIRE_A|CHESHIRE_A  Nonautonomous DNA transposon; HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtaaataaagttttat
tggaacacagccacgcccattcgtttatatattgtctatggctgcttttgcgctacaacggcagagttga
gtagttgcgacagagaccgtatggcccgcaaagcctaaaatatttactatctggccctttacagaaaaag
tttgccgacccctg
>CHESHIRE_B|CHESHIRE_B  Nonautonomous DNA transposon; HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtactgcccgtaaact
aagaatggtttttacatttttaaatggttggaagaaaaatcaaaagaagartattttgtgacatgtgaaa
attatatgaaattcaaatttcagtgtccataaataaagttttattggaacacagccacgcccattcgttt
atatattgtctatggctgcttttgcgctacaacggcagagttgagtagttgcgacagagaccgtatggcc
cgcaaagcctaaaatatttactatctggccctttacagaaaaagtttgccgacccctg
>CHARLIE1|CHARLIE1  Autonomous DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgacatcatcgctctgatggctaatggaatgtgtgctt
gtgtattcttgtgttttctaaaatttttaaggtagtaggtttagggtataaatatgtaggttttcagaga
ttaactcagtttsttcttagcacttctaccgtgctcttactagctatcttcagttatacctgctataatc
tttgtaacctcattatcgtccaataaatcattattttraaatcctaaagttttcctcgwgcctatgtgaa
aacacaagaagcaagtactacttgtaaaacttgcttgcaataacattttgaaaatttcccaaatgtttaa
attttatcgacaacatatagaatttaatattttattctaaaataaaaatttatttataawgtttttccta
tatttaagggtggattgttggcttaaaaaagggagattagaagactcgctttctcaacccacagctgcam
catctatgtctaaagatgctgaaatggacataccagcaagttctctgattcctcatggaarggaggaatc
tactccaaagaaactgggcgaaactgtaaataaaaaacaaaaatatgataaaagctatcttctcagcttt
atagatgttaataatttaccttattgtgtcttatgcaacagaacattttcgaatagtattatggtgccag
ttaagttgcggcatcattttgagaccaatcattcagagtttaaagaaaaaggaattaaatattttaaacg
tagatgtgatgagctctttaaaagccaaaaattgtttgttgcagcttttcaaactagaaatgaaaaagcc
actgaagcatcttacaggataagttgccayattgcattggctggagaagcmcacacaataactgagagac
taataaagcctcgaacagttgacattgctgaatgcctgctggatgaaaagtcagtaaaagaaatcatagc
actgccactttccaatgatacgataactcgtcaaattaaagatttagctgcaaacatgaagaccgagtta
atatntcatctgcagaattgtacttttgccttacaaatggacgaatctacagatgtkgctagacttgctg
tgttgcttgcgttcgtctggtatcagcaccaactgatcatcgaagaacttcttttatgtgaattcttggc
aacaaacacaagtggtgatgaaatattcaaagtgttgaatgacttttttgaatctcatgatttatcctgg
aacaactgtgttgacatttgcactgatggtgcaaaagcaatggtgggtaaaactgctggcgccttagcac
gaatcaaggcagtggcaccaaactgtactagtagtcattgtattcttcaccgccacgcactcgcagtwaa
aaaaatgccagtttcacttaagaatgtccttgatgaagcagtaaaaattattaattttattaaatctcaa
cccttgagtacacgtctttttaatattctgtgtgacaaaatgggaagtacgcataaagcacttctgctgc
ataccgaagtacgatggttgtctcgaggaaaagcacttgtgcgattgtttgagttgcgagctgaactagc
tgcttttttcatggaacaccatttttacttgaaagaacgactgacagacaaactatggttattcagactt
gggtatttggcagacattttctcgaaaatgaacgaagtgagcctgtcacttcaaggaaaacaactgacag
tatttgttgccaatgataaaattcgagctttcaagcgaaaattagaattttggaaaacttgtatccgcca
ccgtgagcttgacagcttcccaatacttaaagacttttctgatgagatcggtggtgatattaacgaatgt
gattttttgatattgtataatgaaatgtgtcaacatttggaagatctgcataactcagtgaaccaatatt
ttccaaatgaccaatgcatgatgttacaaaatcatgcatgggtaaaagatccattcaaagtgcaagatag
accaatggattttaatgtaacagagtatgaaaagttcattgatatggtttcagattccacattgcaacta
acctttaagaaactaccacttgtcgagttttggtgtagtatcaaagaagaatatccacaattatctgaaa
aggctattaaaatactcctcccttttccaactacatatctgtgtgaggccagattttcttcatatacttc
aaccaaaacaacatatcgcaacagattgaatgcagaagcagatatgagaatccagctgtcttctattaag
ccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcactaaatttttttgttttgga
aaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggtttattattttwaaatgaat
waataaatattttaaaaatttctcagttttaatttctaatacggtaaatatcgatagatataacccacat
aaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtcctgagaccaaaaagtttga
gaaccgctg
>CHARLIE1A|CHARLIE1A  DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactgtgttgacatttgcactgatgg
tgcaaaagcaatggtgggtaaaactgctggcgccttagcacggatcaaggcagtggcaccaaactgtact
agtagtcattgtattcttcaccgccacgcgctcgcagtnaaaaaaatgccagtttcacttaagaatgtcc
ttgatgaagcagtaaaaatkattaattttattaaatctcgacccttgagyacacgtctttttaatattct
gtgtgacaaaatgggaagtacgcataaagcacttctgctgcataccgaagtacgatggytgtctcgagga
aaagcacttgtgcgattgtttgagttgcgagctgaactagctacttttttcatggaacaccatttttact
tgaaagaacgactgacagacaaactrtggttattcagacttgggtatttggcagacattttctcaaaaat
gaacgaagtgagcctgtcacttcaaggaaaacaactgacggtatttgttgccaatgataaaattcgagct
ttcaagcgaaaattagaattttggaaaacttgtatctgccaccgtgagcttgacagcttcccaatactta
aagacttttctgatgagatcggtggtgatattaacgaatgtgattttttgatattgtataatgaaatgtg
tcaacatttggaagatctgcataactcagtgaaccartattttccaaatgaccaatgcatgatgttacaa
aatcatgcatgggtaaaagatccattcaaagcgcaagatagaccaatggattttaatgtaacagagtacg
aaaagttcattgatacggtttcagattccacaccgcaactaacctttaagaaactaccacttgttgagtt
ttggtgtagtatcaaagaagaatatccacaattatctgaaaaggctattaaaatactcctctcttttcca
actacatatctgtgtgaggccagattttcttcatatacttcaaccaaaacaacatatcgcaacagattga
atgcagaagcagatatgagaatccagctgtcttctattaagccagacattaaagagatttgcaaaaatgt
aaaacaatgccactcttctcactaaatttttttgttttggaaaatacggttatttttcataaaaatgtta
tttatgttaacatgtaatgggtttattattttwaaatgaatwaataaatattttaaaaatttctcagttt
taatttctaatacggtaaatatcaatagatataacccacataaacaaaagctctttggggtcctcaataa
tttttaagagtataaaggggtcctgagaccaaaaagtttgagaaccgctg
>CHARLIE1B|CHARLIE1B  DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgtcgcaacagattgaatgcagaagcagatatgagaat
ccagctgtcttctattaagccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcac
taaatttttttgttttggaaaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggt
ttattattttwaaatgaatwaataaatattttaaaaatttctcagttttaatttctaatacggtaaatat
cgatagatataacccacataaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtc
ctgagaccaaaaagtttgagaaccgctg
>CHARLIE2|CHARLIE2  DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacatgaagactttccaaggggtatgcgggca
cggatagttttaagggaatcaatttccagatcctcarcttccatatgtactctttcctaaaactgatctg
cctgagaacgcgcctgtggcgagggcctgccgnctttcccacttcccctttcacgatcgcccttctccca
ctttacaaaagaaaggcatacctctcacccatcccgaatcttactatggtgcattgccctggggtgtaaa
aacctccggggcaccaaacaaagggacaattcgaaatactggtgttggtgaagcctcctttaatcaaggc
accataarcccgnngtacagttttatgtcttccctggctttayaaatatttctgttaagggtaaagcatg
atgttggaacaaggtactttggcycatgttggggtgttctgaattcagatatatcntagagtggggtggt
gggagtgatgacgatttttncttgacgatgttgcttcttccatcnctattnacaaagaatacattgctcc
tgaggaagagtcctgagagcaaagcaaagagaacattgntaagaaatggcgaagatggcagtgcnttatt
tcatccaggtgacaaactcatggcgaggtctatctatctgakagttggaatattcaagatwtgkaaaagg
cattctgggaaataccaatcngctacgaagcatgcctcctctgcactttcaccattctcagtantgagaa
agagcttggtgagtactctcattcacctgcgtcttagtctgkgtctcagttgcatattttgcatgatttc
aaggmggtggaggcgaaaagctctgcaattacttctaacagatcaacattacattttcaagtaaaaggaa
catatattggaggtaagttmrtgtatkctattttcttgaacatttattcagattmataggagaaacattt
tcattaacttttgccaaagatttctagatagtgtaaatatatttttctatttaggcamaagtctcctgct
cactgtcactcatgaacmacttctctgttcatttattnattcctaccatatacttactagagttagatta
anttaacaggaatatgttgcagattctactgtaantaatgcacwtaatagcagtcagtaatataactttt
gtaaacccatanttattaatgatccaatancttctctctcnttttgctgwcgatttccacaaagtagatt
aaactgtactcttaaaagcagaacattcacttatgtacgagtgcaggacagaatgttccaaaatgcaats
tagaatgcgatgcccwgaacttcagaaaaccagcttcacttaattaggattaatttctcccgctcggang
ctaatatactgttttanttctgtcaaatgnatnattataagtaataatttttnacaataacgaaattant
antatatacatgaatannctcaagtgtccgtccctctgtcatatttttaaaatgcatttngagacgttct
taaaaaatgaaatwtggtattgtntataggtctctgttcgtagtcgakgagamaagtccccaaatncaca
atttacaatttttcgwtttttccaactccttccatgtatattgaggtccataagcaaggtgcctctaagt
gaaagagtagcaggnataattaatagtcatttgataagtcttggtgaagccttttgggtatacttcctag
aaactgagaaagtgaatgactctaatgactgggtaacaaatccttttgcaagtcaggtggtttccaattc
tttgctttcaacaaaattgaaggaggacctaatcgagttgtcagctgacagatcattaaaaataattttt
gatgatagatcaytatgtgatttttggcatataactcggaaggagttcaaagaattgagtgacattgcta
taacaaaactccttccattcccatctacttatttatgtgaacaagrtttctcagcgcttacatctataaa
aatgaaaaataggaatagaattgatgctgaactctgtctcattctagcaataagtaatattcatccacgg
atacatgaactaattggggaaacaaggccccatccatctcattaagagatgcatttccaataaaatttta
ctttttatgtttawtatttatcaaaatttgtaatatgtttatgttgttttgatcaattgtatattaataa
taattgtaatgataactcaatccagaagaaaawttttaacacttagagccttatggtcanarkaaatata
aaaaattaaatttcaatttatatacatatttttgttgcagagaagtatgatagggtgatcaataaaagac
tttcaagcataaaaatatattacattaggataaaattctgtgggggaagtggaatggaaatacgagttca
aggagaaaaagagaacaatgtaaaatttccgactgttaaagaagagcttgctcatgtattttttaaatgg
atgatggtgggtatcaaatcgctatggtatttagattccattggatacatttaaaagagtgatgtaacag
ttttattttaaaatgtcaatatttacaatatgccagaaattacatcctttgcaactatttaaacttatga
tgaaaaattttagatgtcaacttaaaaatgtgcgagggrgtacatagtttttcaaaattcttttagggga
tacgcaagcaaaaawgtttgaagaccactg
>GOLEM|GOLEM  Autonomous DNA transposon; POGO superfamily.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagtatg
ccgtgttagaccggcagcagccacatgcatctcgtgtttaccgcgtctcttgattgcatcattttctctt
gtgcttgatttaatctcatgtgttttgttcatcacggctcctaagcgttcaaaatccacggctaatgttg
ccagtaagaggccacgtcgagtaattgagctggaaacaaaattaaaagtgattaaggaccgccgaaggtg
gaaaatcagtgatggttattgctcgccagacaggtatgtcccattcgaccatagctgccaccttgaagaa
caagagcaaagtgacagaaactgttaaagggtctgcttcatcgaaggcgacgagaccaacaaatttgaga
agtgccaacatcagatatggagaatatctgctaatgacctggattgaaaaccagacacagaaacatagct
ctctcagcaccacgacgaccacggccagagcaaaagggatatttttgatgttgaaagaaaaggctggacc
cgactgtgatatcgaatttactgctagttccgggtggtttaaatgattcgagaatcgttatccattacat
aatgttaacgtgactgctgagtctgtgagggctgacgtgaaggcagctgaagagtttttggaaactctag
atgagtcgtggagaagaaatacttgccagagcaaatcttcaatatggaggaaacctccctattctggaaa
cagatgcctgaaaggactttctgtcataagggggccaagtcaatgccaggtttcaagggttttaaggaca
ggaaacggtcttgctttggggcaatgttgcaggctacaaattgaagccctttgtgatccgacacagtgaa
aaccccagggccttcaagcatatcagtaagcacacgctgccagtgtactacaggagcaataaaaagtcat
ggatgatccatctcctcttccaagatgccctcctgaattgctatgccagagaaatggagaagtactgttt
ggggaataacatacctttcaagattttgcttattgttgataatgctcctgcacatcttccttttactggt
gatcttcatcccaatttcaaagtggtgtttctctctccaaacaccacctctttgatccaatggatcaagg
aattatagcagctttttaaaggcctactaccagagaagggccttcgcccaggttatcactgtaactgagg
aagacactgatgcaattctggaaggattacaacagccaagactgcatcaagaaccttgcttgggattggg
gtgatgtcaccaaggagtgtatgaatggcatctggaagaagacactcaagaggtttgtccatgacttcaa
aggatttgccaaggatgaggaggttgcaaaaatcaacaaggctgtggttgagatggcaaacaactttaac
ctgggtgtggatgaggatgacattgaggagctcctagaggtggttcctgaggaattgactaatgaggagt
tgttggaactggaacaggaatgcatagctgaagaagaggcaagagaaaaggaaactgcaggagaagaaga
agaacccccaagaaaattcacagtaaagggtttagcagaagcttttgcagacctcaacaagctccttaaa
aagtttgaaaacatggaccccaacaccgaaaggttttcattaatagagaggaatgttcatggtgcattat
ctgcttacaagcaaatctatgatgacaaaaagaaacaaaccaagcaaaccatcatggacatatatttctg
aaaagagtgacacctcctcaagaagagcctcaggcaggtccttcaggagatattccagaagaargcatcg
ttatcataggagatgacagctccatgcatgttattgcccctgaagaccttccagtgggacaaaatgtgga
ggcggaagacagtgatattratgatcctgaccctgtgtaggcctaggctaatgtgtgtgtttgtgtctta
gtttttaacaaaaatnttttaaaaaataaaaaaatwaaaaatttwwaaatagaaaaaagcttatagaata
aggatataaagaaagaaaatatttttgtacagctgtacaatgtgtttgtgttttaagctaagtgttatta
caaaagagtcaaaagttaaaaatgcaaaagtttataaagtaaaaaagttacagtaagctatggttaattt
attgctgaaaaarwwwwwwwwwwwwwataaawttagtatagcctaagtgtacagtgtttataaagtctac
agtagtgtacagtaatgtcctaggccttcacattcactcaccactcactcactgactcacccagagcaac
ttccagtcctgcaagctccattcatggtaagtgcyctatacaggtgtaccattttttatcttttataccg
tatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattgcctacagta
ttcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatagcctaggtgt
gtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaattgcctaatg
acgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>GOLEM_B|GOLEM_B  Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagnctc
aggcaggtccttcaggagatattccagaagaargcatcgttatcataggagatgacagctccatgcatgt
tattgcccctgaagaccttccagtgggacaaaatgtggaggcggaagacagtgatattratgatcctgac
cctgtgtaggcctaggctaatgtgtgtgtttgtgtcttagtttttaacaaaaatnttttaaaaaataaaa
aaatwaaaaatttwwaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtaca
gctgtacaatgtgtttgtgttttaagctaagtgttattacaaaagagtcaaaagttaaaaatgcaaaagt
ttataaagtaaaaaagttacagtaagctatggttaatttattgctgaaaaarwwwwwwwwwwwwwataaa
wttagtatagcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcac
attcactcaccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaag
tgcyctatacaggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagat
acacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttgt
agcctaggagcaataggctataccayatagcctaggtgtgtagtaggctataccatctaggtttgtgtaa
gtacactctatgatgttcgcacaacgaaattgcctaatgacgcatttctcagaacgtatccccgtcgtta
agcgacgcatgactg
>HAL1|HAL1  HAL1 repetitive element - a consensus sequence.
ccctatagtgaagcccacmacctggcaagccccacccacgcactcagagcttccaagtcgctttttagts
tcccactcttaaatatgagcagacagccaaggatcaccagacatctgaggaaancctctaatatggcaga
caganaaataaaaacagagaaaaacawwntntatccatgaaacaagaayaggatgctataaaaaggaaca
ttcagagaacaaaaagaagctcttggaaattaaaaacgtgagagcagaaattaaaatttcaatagaaggg
ttggaagataaagttgaggaaatctcccagaaagtagaacaaacaaaggataaagatacggaaaatagga
gagaaaagaattaaaaaaattgaggatcagtccaggaggtccaacatccaactaatagaagttccagaaa
gagagaacagagaaaaagatggaagagaaattatcaaagaaataattcaagaaaatttcccagaactgaa
ggacatgaatttccagattgaaaggncccaccgagtgcttaccgcaaaaatgaaggaaaaaaatagaccc
acaccaaggcacatcattgtgaaatttcagaacactgaganaaaaggaaaatcccaaaagcttccagaga
gaaaaaaaggtcacatacaaaggatnagaatcagaatggcatyagacttctcaacagcaacactggaagc
tagaagacaatggagcaatgccttcaaaattctgagggaaaatgatttycaacctagaattctataccca
gccaaactatcaatcaagtgtgagggtagaataaagacattttcagacatgcaagatctcaaaaaattta
cctcccatgcaccctttctcaggaagctactggaggatgtgctccaccaaaacgagggagtaaaccaaga
aagaggaagacatgggatccaggaaacaggggatccaacacaggagagaggtaaagggaattcccaggat
gatggtgaagggaaattccaggatgacagctgtgcagcaggcctagagagcaaccagtccagattggagc
aggaagatggaaggctccaggaggaatgttctcaagaaaatagaanacaaatgaaactgatagattatct
gatgtgtttgaatatattgagaggntatnatttagwcatgtgaaagtttgggggagaattgaattagtga
taggtacanagaaaactaagcaaatgaaaaaaagcaagacaattattaactccagggaaaacaaaaagtt
gtacaagaaaggaaatgtaatcatagtacactacatggctcagctgtgaataacatatttacatagtcat
aataatgtaaacactraatactgatttaaccaaaattatgatataaactatattgggaggataagaaatg
gaaagggtgtgcgtatkgtgtangnggaatgaragaantaaatcctcatcttccatagtaggaagtcart
agataatgtctaaaactgaaaaatcaagaaatagcaatataagcatgttatttagaaatatggaggtaaa
tattccaaaagaatcagctaaaagagttgaaagtggttgcctctggggaaggagctgnaggtggtgaaga
gngnagggacggggaaytgctgttttttataagccttttagtactatttgaccttttaaactatatacat
rtattactttaatttaaaaaantaanttataaaaaagnaaataagta
>HERVFH21|HERVFH21  HERVFH21I endogenous retrorvirus flanked by LTR21s.
[encoded data, 6603 characters]
acctattaaaaggctggaa
>HERVH|HERVH  Internal part of endogenous retrovirus RTVL-H (HERV-H family).
[encoded data, 7810 characters]
aagaaggcaggaa
>HERVL68|HERVL68  HERVL68 repetitive element - a consensus.
gcactrtntgggannnttnntggaanggaagaagagggaagatggatgacaaaattatgcctgggtvgct
atggagttattcatggtatraaayagcagctragctgctgtctgttatgagaggtaaaagttacctgtgr
aatttgaaaatgatagatccaatcacagagagttggcnysctggatcccytggctgcttttggccwtkct
ggctaaagtnaggaaraarcacancycarrtgatgtctttggtttttgttctytcctccarktgggagga
gaaagggcccaaacattccnaaangtgagcttnntwtgsaswaaagwyawwaacaktwnnttgnagttnt
cttctccaggtggnaggngnaangrtcngaaaantnctnnaggcnngnwttgagtgrrccaaraatgtta
aaagtttgcattgctctctcctccaagtggaagraaaaargttaaatcagttcccagggctggagyaang
ctttagataaaccagaggaggagaaaaagtaaaaaaaaagcccnccaaacaagwaaaccactctagccnt
ttctacagcttagctgctgcyacagcaactcaacnccctcctttcmctacaaccttcanctccagcanct
gtaatgttaaccytgtaaadtgctnaatttactgctaggggtttgantaaacatghaatgagtaaaaaga
aggaaatnattatwgaatsrctttgtattttgtggctattgcatctggatgtatgataaaaattratgta
aaatgttatatgcttgtaatttcataaatgctagaggaatcatcctaatmgggaaagctgcaaagaaaaa
aaagttagtggnawcacaactcccttgctttytgctgcyggtgggtggattggaatttaaactctttgag
tattggaaasagaacaagtctccataactgatgatttttgcctattggarcctctgnaaaaagggagaca
acatnaaaagagaggcaatctccagatggagatacacttttggagttttaaaaanyagtttttagtttgc
taatgwgctcttgytgaaatgagatgtctgacccttagaggctgatgattttcagcctgatgtgcatgat
ttttgagggggtcaatttggactctaaractgacaagataaaaaggmctyttagaaaagccttgcttgtc
acttggacttggaatacagctgtctggntcttcagtntctcagctttgctgctgctgaagaaaagccact
ggcttttttggaatcctgaattcacagatcctaattgcctgtacctgactctaagctgaaacctcatact
gtctgctgtgrgctgtttcagcctcgngntgagctgtgctgaactgaaatnngntgaaatggctcgactc
aatgaacagaactcagactctgggactgttgcagatttaggaccaccctctgtggggccataaactatga
aaacatcacggatgctggctggactgtctgggtcacatacagatgcccacaggaaagggcttgttctctg
atgggaccatctaaaattgagctgctgattggctctatatttctgatacagagactaattgcattcttaa
cttgtgatttctgtcgaaagctgcaagttgggggagggcacattacaagaagtgtgacccctccacccac
tcctgacagattggacttgaccccctctcggggatgtctcactgctattgacttgttgtgttcggctttc
tggattagttgcagtttgcaacaatggactgacagcctgagtctacttccctcacctttctcctggtaca
cacatcttagtgagacagtttgattattaaatgcagctgtccccagaaagggattgatcttttttttcct
aggctgctcaccggataaatgatcaggacgaaaagggtgggaaggttatgtaaactcattttgaaaaatt
ttgaaaattcagaattcatcctgaccaatttctgaacatgatgtgtctttccggttaagttgtataaaaa
tgtttttctataaaaatgtttttgtccctcttgcatacaacccttccagacaaaaggtctgggtgagagt
aagagatgattggagaaatatgaagttaagattgtaagttatgaatattgctgaatgggacacactgatt
ttgtaacaacggagaaaaaagaaaaacctatggaggcacggggtgtgagagagggcattaatgatctttg
tttttcagaactgctcctggaagctttcccctcttcctgaagaaaaattccccatgctgcctttccaagc
tgctgcgagcgctttgaattcaaactgactgctgagcctaagatcacacctgacagcgctgactatgaga
cagcagggggtggccccagctcctgcactttccacgaagaacacctccagatgtcatccacacacatgag
acggatgaactggtgtcatggacaagcaaaactgtttggaactgactgcctttaggcagtccctctgaaa
ccaaggactaaactgaattaattggactagactctttgggagtagtccccgtggtaagaggccacactgg
ggaccctgttaacctgtactgcctgactaatgtatgtcctgcttggggtaccctaacaattgtaaactct
ttgtttccaggggtaccacgtgtgccctctgggattgtacttttatgtgtaccctgactatcatgacact
gcctcagccctggaaggctttcaggtcagcttcaacttactggccagagttgtgctgtgcctgaattgat
gcctcaggccaraaaaaaaaaggttaatacagaaacttaaggaggaagccacctggctttctaagataga
cctttatggttaatgggatttgttttaactggctaaattcaggacccctaaagggcataaactgagatca
atactgcaggttggtctcaccctgctgcgtggggtcctactgataataattttgctgtaaagatgccttg
gccaagggggtggactgtgcagaagag
>HERVS71|HERVS71  Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 6106 characters]
gtaaccctggccacataccctggaggattgacctggtcctcaacacttt
>L1M3A_5|L1M3A_5  L1M3A_5 LINE1 repetitive element - a consensus.
gagtgawgtcagcaagatggcagaatwggaggtctcaggctccagtctccctcacagaaagtccgactag
caactattcacagacaagaacgcctttgtgaaaaatgccagaacttggaaatgagrctgagacanctncg
tggancacagaaacgaataaaaaccacattaaaagggtaagaggaaccgtctcactttaaccacgttgcc
cctmagtcggcacagtrccacacngagagaawttccccgggcctacagtttctacagtgggaaaagagag
ctkgaggtggacatccagcttccctagcattccaagatgcttcccaggargcccactcynatctcacctc
atgaggaaacactgagggaaatggcanggctagaccgtctggagtcaggtagaaacaaaaaaagggggca
nagctcatagtaaccagtgcacggatcttggtggtagctctgtattcctgccagcggtggcgcctgatca
gaggtaccagccaatggcatagcccacccgcaaagctgagctggtcgctcccagaagcacggtgagaagt
tcnacccggcttgagtccctagatggccagcctccaaacccagccttagascctaccccagngctccacc
caggcagggagatacacaccacmatgtatttcagcagagcacagaggctagacctgcctgacccaggagc
ccaaacagtgactcggcccagcctcaaagcccaccccaaggacccacacaggcaggaaggcaaacgcgga
ttgtgcakctctaccagggcaaagtgccagccaccgtccattcstwncagcaattccatctaaccttgca
gcctaggggctggccctgcccaactgcagagctsaaacagcggctccgcctggccasagagtmtaccccg
tggcycagcccaatagacgcgactncaacgtccantcagcggctccgcctaannncagagcccagccagc
agccccgcctgacctcagagcmcaggcantagcccgnccagctagagaacccaamagcaagcactgccta
cccatggttattaccagctgtcccatccagaatcacaagctggactgaataatgaaggtctwttcctgnc
gaagaacacctgtaaaagccagaagaggtggctgcctmgtcaaatgcatggataccaatgcaaggacgca
agggttacgaagaatcaaagaatcatgacacctccaaaataaactaacaaagctccaacaatggamccta
aagaaataaagatctataaaatgactggcaaagaattcagaataatcctcttaaagaagttcggtgagct
acaagaatacatagatagaaaattaaataaaatttggaaaacaatacatgaamaaaacgaaaagtttgac
aaagaaatagaaacgawtattctaaaacccaaatagaaatcctagagatgaagaacacaattgctgaaca
aaaaaattcaataaaaagcttcgacagcagactcaatcaagcagaagaaagaatcagtgagctcgaagac
agaacatttgaaattatccagtmagaggatcaaaaataaaaaaaatgaaaaacagtgaagaaagcctata
ggaattatgggacaccatcaagaaaactaacatacgcataatagaaatnccagaaggagaagagaaagaa
ggccagaaagyatattttaagaaataatgactgaaaacttcccaaatctggggaaagatgccagcatcca
ggtacaagaagcaca
>L1M3D_5|L1M3D_5  L1M3D_5 LINE1 repetitive element - a consensus.
gagtgacatcagcaagatggcataataggaagccctggacctttcttcccttcacagacacactgattca
gcaacaattcacggaaaattacctttgtgagaaatgcagaaactagttgagaggctcctgcaccctgggc
gagcgcgaaaccagacccacatcaaagccggtagggagattcaggacaccctctcatcgaagtccctccc
cccggcwcagcgcmgtgcgatcggaaggaaaaaacccccaactcccggcttctcccaggggaggaaaaga
gttggttcgcacgtcaagtgccccracttttccgaggggctacccagaggactgtcttctgtcttgccwg
tctcrgagctctgataggcccggcataatctagacacccgggggagaacagagatggtggtttgggctgg
tagatgccatagctnctcacccctgctcagcacagaacaagnagatgaaaacccccagntctcagctttc
ccctgaggaggaaaanagttgaatggactggaaaacagaattgaatggagcatccaacaatccagctttc
tgggagtgcctaaggaaccgattgcatttcaacttgtcgcgctacgctgatangattnancataccctan
atgctcggcgactgcaaagaacaaaaancaggttggactagtacgaaggtttgagaggnccccaaaatct
ctggctaggctgatcggtgaaggtcttctcctgcataaggccagtctgtgaagactgagagaggtggctg
ctttgtataatgcgcagacaccaatacagagagtcaaggaaaataaagaatcagggaaanatgttccaaa
caaaggaacaggataattttccagaaactgaccctaataaattggagttatanaatttacctgacgaaga
attcaaaacaattgttntaaagatgctcatgaataacatgataaagatgctcaccaagatcaggaaaaca
atacatgaacaaagtgagaatttcaacaaagagatagaaaatgttaaaaagtaccaaacaaaaatcatgg
agctgaagaatacaataactgaactgaaaaattcactagagaggttcaacagcagactagatcaagcaga
agaaaggatcagtgaactcaangacaggtcattcgaaattatcgagtcagaggagcaaaaagaaaaaaga
atgaaaaagagtgaagaaagcctaagggatttatgggacaccatcaagngaaccaanatacacatcatgg
aagtcccggaaggagaagagagaganaaaggnccagaaagcntattcgaagaaatagtgactgaaaactt
cccaaatctggggaaagaaatggacatccagatncaagaagccca
>L1M3_5|L1M3_5  L1M3/4 LINE1 repetitive element 5' end - a consensus.
agagcaagatggcagaacagaatgctcnaacaattgcccccatyctryyccnccacaggaacaccaaatt
gaacaactatctacacaaaawagcaccttcataagaaccaaaaatcanntaagcgatcacagtacctggt
tttaacttcatatnactgaaagaggcactgaagagggtaggaaagacagtcttgaatcgccaacgccgcc
cctcccccatcccccggcagtggccgcacggcacggagagagaatccgcgcacttgggngagggagagcg
cagcgattgtgggactttgcgttggaantcagtgctgccctgtcanagcggaaagcaacancgggcagaa
ctcagccggcgctcatagagggancatttagaccagccctagncagaggggaatcacccatcccagcggt
cggaacctaagttccggcaagcctcgccaccgtgggctaaagtgcnntagggtcctaaataaacttgaaa
ggcagtctaggccacaaggactgcaattcctgggcaagtcctggtgctgtgccgagctaagagtcagtgg
acttagggggcacacgacctagtgagacacyagccggggtggccaagggantgcttgcgccacccyctcc
cycaacnccaggcagcacaactcgcagctccgggagagactccttccctccgcttnaggagaggagaggg
aagagtaaagaggactttntcttgcaantcggataccagctcagccatagtaggatagggcaccgagcag
agtnnwgaggycccnattctaggccctagctcccggatgacatttctaaacacaccctgggccagaaggg
aanctgctgccttaaagggaagganccagtcctagcaggantcatcacctgctgactaaagagcccttgg
gccctgaataatcagcagcgatacccaggttagyactcgccgtaggccttgggtgagantctgagacgtg
ctggnttcaggtgtgacncagcacattcccagctgtggtggctacggggagagactccttctgcttgaga
aaaggagagggaanagtaaaggggactttgtcttgcagcttagntaccagcttggccacagtggagtaga
gcaccaagcgggctcttagggtccccgattccaggccttggctgttggatggcatttctggacctgccct
gggccagaggagagcccactgccctgaagggagagtctcaggcctggcagcattcaccgcaagctgacag
aagagtccttgggctttaagtgaacattkgcgrtagycaggcagtacttnctgtgggcctgcggcggtgg
tngccatagggagagnctcctctgcttgtngaaaggggagggaagagtgggaagaactttgtcttgtggc
ttgagtgccagctcagccgcagtagaacagagcaccgggtagatttctaaggtttccgactccaggccct
ggctcctggatagcatcyctggacgtgcccggggccagagagaactcaccaccctgaagggaaggataca
agnctggctggctttaccacctgctgattgtagagtcccggggccttgagcgaacataagcagcggccag
gcagtggttactgcgggccttgggcgagacccagtgctgtgctggcttcaggtctgaccyagtacagtcy
cagtgrtggtggccacaggggtgcttgtgtcacccctccyccagctccaggcagctcagcacagagagag
agacngagtttgtttgrgggaaagtaarggaagagaacaagagtctctgcctggtaatccagrgaattct
tccagatcttatccaagaccacnaaggcagtacctctacgagtctgcaagagccacagtattactgggct
tggggtgccccctaatgcagatacggccgcagtgacaaaaaacttagatcacaacacycaagtcccttca
aatacctggaaagcyttcccaagaaggacgggtacaaacaagcccagactgtgaagactacaataaatac
ctaactcttcaatgcccagacacagacaaacatctacaagcatcaacaccatccaggaaaacatgacctc
accaaatgaactaaataaggcaccagggaccaatcccggagaracagagatatgtgacctttcagacaga
gaattcaaaatagctgttttgaggaaactcaangaaattcaagataacacagasaaggaattcagaatyc
tatcagataaatttaacaaagagattgaaataattaaaaagaatcaagcagaaattctggagctgaaaaa
tgcaattgacatactgaagaatgcatcagagtytcttaacagcagaattgatcargcagaagaaagaatt
agtgagcttgaagacaggctatttgaaaatacgcngycagaggagacaaaagaaaaaagaaaanaatgaa
gcatgcctacaagatctagaaaatagcctcaaaagggcaaatctaagagttagtgaccttaaanaggagg
tagagagagagataggggtraaagtttattcaaagcnataataacagagaatgtcccaaacctagagaaa
gatatcaatattcaagtaaaagaagnttatagaataccaagcanatttaacncaaagaagactacctcaa
gacatttawtaatcaaactcccaaaggtcaaggataaagaaaggatcctaaaagcagcaagagaaaagaa
acaaataacatacaatggagcnccgatatagtctggcagcagacttntcggcggaaancttacaggccag
gagagagcggcatgacatatttaaagtgctgaagaaaaaaaaaaaaactttnatcctagantagcgtntc
cagngaaaatatccttcaaacatgaargagaaataaagactttcccagacaaacaaaagctgagggattt
cntcaacaccagacctgtcctacaagaaatgctanagngaattcttcaatgtgaaagaaaaggacgttaa
tgannaataanaaatyatctgnaggtrcaaaactcactgataatagtgcgcagaaaaacanaatattata
acantgtaattatggtgtataaactactcttragtagaaagactaaaagatgaaccaatcaaaaatanta
actanaacaacttttcaagacatagacagtacnntaagatanaaatagaaacaacaaaaagtttaaaaat
tggnggacgaagttaaaatgtagagtttttattagttttcttnttgttnnttgrtttttttnaanttatg
taatnagtgttattatcagtttaaaatataggatattatttgcaagcctcatggtaacctcaaatcnaaa
aacatacaacggatacacaaaaataaaaagcaagaaattaaaacatatcaccagagaaaatcaccttcac
taaaaggaagacaggaaggaaggaaagaanaaagagaagaccacaaaacaaccagaaaacaaataasaaa
atggcaggagnaagtcattacttatcaataataacattgaatgtaaatggactaaactctccaatcaaaa
gacatagagtggctgaatggatataaaaataagacccaatgatcggtcgcctanawgwaacacacttcac
ctataaagacacakatagactgaaaataaagggatgaaaaaagatatttcatgcnaatggaaaccaaaaa
agagnaggagtagctatacttayatcaganaaaatatatttcaagacgaaaactataagaagagacaaag
aaggtcactatataatgataaaggag
>L1M6_5|L1M6_5  Subfamily of LINE1 repetitive element 5' end - a consensus.
gacatcagcaagatggcggaataggactttccagcgctcgtcctcacagaaacatcaatttgaacaacta
tccacgcacgaaaataccttcacaagagctaaggaaaccaggtgagagattacagyacctgggtgtagca
cagaaataagaaaagacgcattgaagagggtaggaaggacagttttacattacccgcgtcacccctcccc
caancccaggcagcacagcatggagagagataccctctgcttgggggaaggagagggaagtgagcacagg
actttgccttggaccccaaacactaggcccgccccagtaaaacccagtactaggcaggcccccatagccc
cagactccaggccagtacctacggactgagccgyaccagatcccacagcccaggctccaggcctgcctgg
tggactcagtctccaggcctgccccagcaccaggccaaccccagtgccccaggctccagaccggccccag
caccaggccagccccagtagccccaggctccaggctgsccccagcaccaggctggcccccatagccccag
gcttcaggcccaccccagcaccaggctggcccctrcagccctagtcatcaggccagcacctatagaccca
gcctccaggctggcccctgtagacacaggctccaggcctacccagcrccaggccagcccctgtagcccca
ggctccaggcccaccccaggytccagaccagcccagagccaggtyggcccacatagccccaggcttcagg
cctgccccagyaccaggtcagcacccctggcctcagaccttagccaggtaccaggctggcacctgtagac
acaggctccaggcctgcccagtaccaggccagtccctgtggccccaccctccagggcyagcccctgtggc
cccatgctccagcagacccagggttcaggcctgtcccagtagaccccagcactaggctagtccccataga
cccaggctccaggactgtccctgtgtacccaggtcccagggcagcccctatggccccaggacccaggcca
gccctcagagacctagcctctaggccagccctgcagacccagcctccaggctggcacccayagacccaag
ctccaggccatcccccaggttccaggccagcctcagtagctccaggcaccaggctagcacccacagaccc
aggctccagactagccccacgctaccccagcaccaggccagccccaggctccaggctggtccctgtggcc
caggctccagtggacccagggtccaggcctgctccagcagacccagggtccaggcccaccccagtagacc
ctggttccaggctagcccccatggactcaggctccaggaccacccctgcagacccaggctccaggccagc
cccyatggaccaggatccarggcccatytccccagttgcaggctccaggcctgccccagtgccaggccag
cccccatggactcaggctccaggcccatcccagtggacccaggctccaggcccatcccagyaccaggcca
gcccctgyagactcaggctcaaggcccaccccagcaccaggtcagcccctgtggacccaggcttcaggcc
agcccctatagacacaggctccaggccyaccctcatggacccaggctccaggcccayccccacagaccca
atcaacaggtccacccagtggatccaggctccaggcycaaccctgtggacccaggcaccaggcctgccac
ctgctgacccaggcaccaggccagcctgcctaaggactccagcagcaagcctgcctatagaccataccag
atggcctgcccagaatctctggatgactggtgaagggctttcccagacaaagccagtctgcaaagactgg
aataagtccctacttcttcaaatgtgcagacaccaatgcaaggcccaagaatcawgaacaatcagggaaa
catgacaccaccaaaggaacaaaataaatttccagtaactgaccctaaagaaatggagatctatgaactg
cctgacaaagaattcaaaataattgttttaaggaagctcagtgaactwcaagaaaacacagatagacaat
taaatgaaatcag
>L1MA10|L1MA10  3'-end of L1 repeat (subfamily L1MA10) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctgggggragggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
ataatactggattgtacacttaaaawttgttaaaagrgtagatctcatgttaagtgttcttatcgcacaa
caaaaaaatggggaacttttggrrgtgatggatatgttcattatcttgattgtggtgatggtwtcacggg
tgtntacatatgtcaaaactcatcaaattgtacacwttaaatatatgcagtttttagtgtataattatac
ctcaacaaagctgttttaa
>L1MA2|L1MA2  3'-end of L1 repeat (subfamily L1MA2) - a consensus.
ytaatatccagaatmtataaggaactcaaacaaatcaacaagaaaaaaacaaataatccmattaaaaart
gggcaaaagacatgaayagacatttctcaaaagaagacatacaaatggccaacargyatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaacyacaatgagatatcatctcaccccagttara
atggcttttattaaaaagacaaaaaataacaratgctggygaggatgtggagaaaagggaactcttayay
actgttggtgggaatgtaaattagtacarccaytatggaaaacagtttggagrttyctcaaaaaactaaa
aatagarctaccatatratccagcaatcccactrctgggtatatayccaaaagaaaggaaatcagtatat
yaaaragatacctgcactcccatgtttattgcagcactattcacaatagchaagatttggaatcaaccta
agtgtccatcaacrgatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgaratcytgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agycargmacaraaagacaaacaytgcatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtnggaggattggggggng
gkgrrgagggatggttaatgggtacaaaaaaatagttagaaagaatgaataagacctagtatttgatagc
acaacaaggtgactatagtcaataataatttaattgtacattttaaaataactaaaagagtataattgga
ttgtttgtaacacaaaggataaatgcttgaggggatggataccccattttccatgatgtgattattacac
attgcgtgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaat
taaaa
>L1MA5|L1MA5  3'-end of L1 repeat (subfamily L1MA5) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaataccgcatgttctcactcatatgtggaagctaaaaaagttgatctcata
gaagtagagagtagaatagtggttactagaggctgggaagggtagggrgaggggggratagggagaggtt
ggttaawggrtacaaaattacagttagataggaggaataagttctagtgttctgtagcaccgtagggtga
ctatagttaacaayaatttattgtatattttcaaatagctagaagagaggattttgaatgttcccaacac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacawtgtatac
atgtatcgaaatatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaa
>L1MA9|L1MA9  3'-end of L1 repeat (subfamily L1MA9) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgatctcacttatatgtggaatctaaaaaagtcaaaytcata
gaaacagagagtagaatggtggttaccaggggctggggrakgggggaaatgggaagatgttggtcaaagg
gtacaaagttkcagttatgtargatgaataagttctrgagayctaatgtacagcatggtgactatagtta
ataatactgtattgtatacttgaaatttgctaagagagtagatyttaagtgttctcaccacanacaaatg
gtaactatgtgaggtgatggatatgttaattagcttgaytgtggtaatcatttcacaatgtatacatata
tcaaaacatcacgttgtacaccttaaatatatacaatttttatttgtcaattatacctcaataaagctgr
aaa
>L1MB3|L1MB3  3'-end of L1 repeat (subfamily L1MB3) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaacgccactgaactgtacgcttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaaaaaaa
>L1MB6_5|L1MB6_5  L1MB6_5 LINE1 repetitive element - a consensus.
ggtaatgtcagcgaaaatggcggagtaaggamctccgaaaattcactcctccataaaagcaatgaaaaca
ctggcaaaaattgtcagaatcaactttttcagaactctggaaattaaccaaaggcttacagcaatctagg
aagtgtttattcaagaaaaayagctgaatctcwgtaagaacagcgagctttgtggtattttaacttgccc
tantcccatcccccwctctccagctcagcagtagccttgaaaataacagcttatattatggtgaaaacca
gcagccaccggagkgggcagaacgggtttggagcttctcaaaagycncattcccagggaattgtcattat
ttgacctgtctggcggctccctggaagactccattcamagggcttgtctttatttgacctgactcagagc
tcactcagtgcgaamagcattatacctgggggcatttgttgaaaacawttagaggcaawtgtttaacacc
acagctgcctgaggcagtgrataacagttggggcaaacaagaggctgaccaaaaagcttaaaaggaaaag
ctggggaatgagatgtccgnaggggctttgaaaagctccaacatattcctgggaatctagaaggccacgc
gcatgcccagggctgtacacatgctcagaaaagacctaagaaggccctaagctctcacctctggctgacc
ttgagactctgcacaagcaggaagtgaagactaaggcagagttgtaaactgcctggctgagtgttgaagg
tatgccccaacacacacacagaaccccttggcaaagamtgggagacttgttggttcmaggcatttaagga
aatctctgtccaatcattagctgaccactaagctaacngagcagagacttcagtggccacacatgacaaa
gaatacagactttacaaaattagttcagaaaagtcactaaacaaacagcaacaanaacacaaaagagyaa
caacaaaccctggaaaggagggagaatctgatttccagagttgccacattatattatttaaaatgtccag
ttttcaacaaaaaattacgaggcatacaaagaaacaagaaagtatggcccatacacaggaaaaaaagcag
ttaatagaaactatccctgaggaagcccagacgttggacttactagacaaagactttaaatcagctattw
taaatatgttcaaagaactaaaggaaaccatgtntaaagaantaaagaaaaatatragaacgatgtctca
ccaaatagagaatatcaataaagagacaaaaattataaaaaataaancaaatagaaattctggagttgaa
aagtacaataactgaaataaaaagttcactagaggggtacaacagcagatttgagcwggcagaagaaaga
atcagcgaacttaaagataggtcaatcgagattattcagtctgaggaacaaagaaaaaagaatgaagaaa
aatgaasagagcctcagagacctgtgggacaccatcaagcgtaccaatatatgcataatgggaatcccag
aaggagaagagagaaarkggcagaaagaatatttaaagraatagtggccgaaaatttcccaaatttgatg
aaaaacatywayctwcayatccaagaagctcaataamctccaagtaggataaactcaaagagatccacat
ttasatgcatcatagtcaaactgctgaaaaa
>L1MB7|L1MB7  3'-end of L1 repeat (subfamily L1MB7) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctataattaaaaagacagacaataacaagtrttggcgaggatgtggagaaattrgaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactttggaaaayagtttggcagttcctcaaaaagttaaa
catagaattaccatatgacccagcaattcyactcctaggtatatacccaagagaawtgaaaacatatgtc
cacacaaaaacttgtacacgaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatccatacaatggaatattattcagccat
aaaaaggaatgaagtactgatacatgctacaacatggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggycacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctgggggraaggggaaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctaaaattagatagtggtgatggttgcacaactytgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaarctataa
>L1MC2|L1MC2  3'-end of L1 repeat (subfamily L1MC2) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatccaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catactcttaccatatgatccagcaatcayactccttggtatttacccaaatgaattgaaaacttatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaagaaatgaactatcgagacatgaaaagacatggaggaaccttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaactatatgacattctgaaaaaggnaaaactatgg
agacaagtaaaaagatcagwgattnctagagkgastrggarrgggagggaagaataggtggagcncaggg
gatttttagggcagcgaaactattctgtatgatactataatggtggatacatgacattatacatttgtca
aaayccatagaactgtacaayacaaagagtgaaccctaatgtaaactatggactttagttaataataatg
tatcaatgttggttcatcaattgtaacaaatgtaccacattaatgcaagatgttaataatagggtaaact
rttgtgtgggggagggagtatatgggaactctctgtactttctgctcaatttttctgtaaacctaaaact
gytctaaaaaataaagtctattaataa
>L1MC3|L1MC3  3'-end of L1 repeat (subfamily L1MC3) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgawacyactatatacgt
atannaraattaaacaaataagtaaatgtatkgtagatgatgggagccaggtttctcactgtcggagtga
ggagttacagataagcaaagggaggagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccgctgagagggccta
gaagcaacgacaccccagtagcaatgagcacacctagcacccagatcttggtttctaataccattctcca
ataaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatatacaagatgag
cctggaacatcttgcartgccagaaaataaggaagtgctcaaaaacacaatgatrggggtatgtcaaagg
gacacagragccaactgaaagagctcccaatggccaaagctggaacaatttgagcaacaaaataaattat
rgtagtattggattataacycaaagtataaaataaatatccatgagtccatactgatataaatgaatgat
taaataaataaataaattgagaagataaataagtctctnntgcagaagaatttcaaataatttatgtaga
tarcctnccctcaaggaagtggagcgtaactccccactccttaagtgtgggatggatatagtgacttcct
tccagaaagcatagtataggacggaaaaaaaagtaaatttacwgtagagaaacctgacaaacactacctt
agccaggtaatcaaagttagcatcaacaattgtaagtcatgttgatagyatatacccttgatatgatgtg
ataagaatggcacttcacctccgtggtcttcctcccaaaaacccataaccccagtctaatcatragaaaa
atatcagacaaattccaactgagggacattctacaaaatacctgaccagtactcctcaaaactgtcaagg
tcatcaaaaacaaggaaagtctgagaaactgtcacagccaagaggagcctaaggagacatgacaactaaa
tgtaatgtggtatcctggatgggatcctggaacagaaaaaggacattaggtaaaaactaaggaaatctga
ataaagtatggactttagttaataataatgtatcaatattggtttattagttgtgacaaatgtaccatan
taatgtaagatgttaayaataggggaaactggatgtggggtatatgggaactctctgtactatttttgca
actttcctgtaaatctaaaactatttcaaaataaaat
>L1MC4|L1MC4  3'-end of L1 repeat (subfamily L1MC4) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgaaactattttatatgt
attgtaggattgagcaaataagtaaacgcattgaagataatgggagccaggtttctcactgtcggagaag
ggagttacaaatatggaatgggggaagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccactgagagggccta
gaagcaatgacaccccagtagcaatgagcacacctagcgcccagatcttggtttctaaataccattctcc
actaaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatgtacaagatga
gcctggaacatcttgctrtgccagaaaataaggaagtgctcaaaaaatgatrggggtatgtcaaaaggac
acagragccagcttgaaggggctcccactggccaaatctgggacaatttgagcatcaaaataaataacgg
tagtaatggattataactcattgaataaaataaatatccatgagttcatactaatataaataaatgaata
aaagaaataaataaataagaragaaaggaaagytcttcttacagtagaatgccaactaayaaatgtagaa
ggaataaaataatagaaaaatcaccatttggcaaayaccacagtaataantgtttcaggcaagaaccatc
gatagatgctaaaattagtgggcgaaartttgatgagaaacgggatatttgcatagtctcaaagtatctc
yccacaagatatttattaattayaaagggaaaaatagtractttacagtagagaaacctggcagacacca
ccttaaccaagtgatcaaagttancatcaccaataatgagacaaattgacatcatgcgcytcctgatgtg
atgcgccgagaaggacacaacatcacttctgtgatattcytgccaaaaatgcataacctgaatctaatca
tragaaaatatcagacaaacccaaattgagggacattctacaaaataactggcctgtactcttcaaaaat
gtcaaggtcatgaaagacaaggaaagactgaggaactgttycagattgacggaagactagagacatgaca
actaaatgcaacgcgtgatcctggattggatcctggatcgagaaacggtgggagtttktayctataaagg
acattattgggacaattggcgaaatttgaataaggtctgtagattagataatagtattgtatcaatgtta
atttcctgattttgataattgtactgtggttatgtaagagaatgtccttgtttttaggaaatacacactg
aagtatttaggggtaaarggncatsatgtctgcaacttactctcaaatggttcagraaaaaaaatnnata
tayataaryagagaatgataaagcaaatgcggcaaaatgttaacaattggtgaatctgggtgaagggtat
acgggwgttctttgtactattcttgcaacttttctgtaagtttgaaattatttcaaaataaaaa
>L1MC5|L1MC5  3'-end of L1 repeat (subfamily L1MC5) - a consensus.
aaaaaaaaaayacatttctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatga
gtaccctyaggacccagattgtggtctctaaataccatttcccactaaaaggaaccagggctccttggag
aaatggctaattccaggtctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagata
gcaaggaagctataaaactactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgg
gacaatttgagcatcaataataactgcaatttaacacatcaaatatrtttaaatccatgagtttataata
aaaaaatctaattggtcacctttggagtgatgctagggaaccaactcattattttgaaaactggtaaata
aagggaaagaatcaagcatttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwga
tgagggaaatttctctttatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcac
cattttgcaacccctaatgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaac
tarasatytgcctcctgatggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatca
aacctgaatctgatcaagcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatg
ttaaatgacaccatrgggatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaac
ttttcttcaacaaataaattatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaa
agacatatcaaccaattacaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaa
atatatrtgtatacaattggaaatttgaacactgactagatatttgatgatattaaggaattattgttat
ttttaggtgtgataatggtattatagttattttataaaatagtccttatcttttagagatacatactgaa
atatttatagataaaatkatatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtg
gagctatagatgaaacaaaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagt
tcattatactattctctctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgt
tggacattaatttgttggcaa
>L1MD2|L1MD2  3'-end of L1 repeat (subfamily L1MD2) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatagtttggcagtttcttataaagttaaa
catacamttaccatatgacccagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccatacmatggaatactattcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctcaagaacattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttatatarcattcttgaaacgacaaaactatag
agatggagaacagattagtgrttgccaggkgttagggatrcaggraggaggtggatgtgrytataaarrg
gtagcatgagrgaatytttatggtgatggaacwgttctgtatcttgaytgtggtgrtggttacacgaatn
tatacatgtgataaaattgcatagaactaaatayryryryrataagtacaagtaaaactggcgaaatctg
aataagatwnatggrttgtaycaatgtcaatwtcctggttktgatattgtaytatagttttccaagatgt
taccattgggggaagctaggtgaagaacacacgggatcccyctgtattatttcttacaattgtntgtgag
tktayaattatttcaaaataaaaagtttaatttaaaaa
>L1MD_5|L1MD_5  Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggca
>L1ME2|L1ME2  3'-end of L1 repeat (subfamily L1ME2) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctcaaaaagttaaa
cacgcacctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacttgtacaagaatgttcatagcagctttattcataatagccmmaaagtggaaacaaccca
aatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatattactcagcaat
aaaaaggaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgtatgattccatttatatraaattcwagaacaggcaaaactaatc
tataatgntagaaatcagaatagtggttgcctctggkgagggtraatgactggraagggrcatgagggaa
ttttctggggtgatggaaatgttctatatcttgatcggggtggtggttacacgagtgtatacatttgtca
aaactcatcgaactgtacacttaaaatctgtgcattttactgtatgtaaattatayctcaattttaaaaa
a
>L1ME3A|L1ME3A  3'-end of L1 repeat (subfamily L1ME3a) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctacaaaagctaaa
cacgcgcctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacatgtacaagaatgttcatagcagcattgttcataatagccaaaaagtggaaacaaccca
gatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatactactcagcaat
aaaaatgaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgnntgattctatttgcataaaatacaaaaccaggcaaaactaatc
aatgntgttagaagtcaggatagtggttgttctgggaatagtaatgactgtaaggrarcatgagagggct
ttctggggtgctggtaatgttctgtttcttgatctgggtgctggttacacggctgtgttcartttgtgaa
aattcatyaagctgtacacttatgatwtatgcayttttatgtatgtatattatayytcaataaaaaaaa
>L1MEC_5|L1MEC_5  L1MEC_5 LINE1 repetitive element - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>L1P2_5|L1P2_5  5' part of L1 subfamily - a consensus sequence.
ataaaaaaattaatgagaagaggattctgggaagatggcagagtaggaagcaccaggaatctgtctcccc
acctagacaacaattgcactggcagaatctgtctgatgtaactattttggaactctggagtctattgaag
gcttgcaacttccaggggaaggcttggatggtaaattgtggttaatttcggtcaatttcagctcttagca
cagtagcagctacccatcccccacccccagccccgtggcaggcagctgtgcacgtgttcctggagcagct
tgcacacagcttgcgggagccagggtgggcaaaaaggatcctgtcctccaaatatcggggatctgtgctc
tgatcgctgattgctgcttctgatcacagaggtgcagacaaagaggtggcggccattgttgtcgcacctc
ccyccattgttgcaagcccctccccctctggctgaagtgacttccaggggatttaaagggctagtaccct
ttctccgctttatttttcttttttccccttttgggagccagacattaaagactaggacattcaaaagcaa
ctgcatatacggggaaaattagaaagtcaccgtgcatgcccagggaaaggcacaggctcagaaaagacct
gagaagaccttaagtttacacctcaggctgatccttggcacagagacagcctacaacaataaaaacaaaa
caaaaaaataacaaaaacacagcaaaccctggggaagagggagaatctgatttccagagttaccacatta
ttagattcaaatgtccagttttcaacaacaacaacaaaaaatcacaaggcatacaaagaaacaggaaagt
atggcccattcaaaggaaaaaaaataaatcaacagaaactgtccctgaaaaagacctgatggcagatcta
ctagacaaagactttaaaacaactgtcttaaagatgctcaaagaactaaaggaaaacgtggagaaagtca
agaaaatgat
>L1PB1|L1PB1  3'-end of L1 repeat (subfamily L1PB1) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgaggatgcaaa
ggcgtaagaatgatacaatggactttggggactcgggagatcgggrgaaagggtgggaggggggtgaggg
ataaaagactacaaattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcacaaatcac
cactaaagaacttattcatgtaaccaaacaccacctgttccccaaaaacctattgaaataaa
>L1P_MA2|L1P_MA2  LINE1 subfamily consensus; L1PMA2 subfamily.
[encoded data, 7739 characters]
tctcatgtaccccataaatatatacayctattatgtacccayaaaaat
>LINE2|LINE2  MIR2/LINE2 repetitive element - a consensus.
ctgtcattcattaccgntccttgttgcagtcatccatcgagcccggctcggtcactccctctcatttctc
gaagaktttrtctcctagntcaactgtcactctctcataataatantcctgtcataattcttggtgattt
caatatccacatagacgatccatccaatactctggcctctcagttccttgacctcctctctcccgtggtc
ttgttctcctctacccactctcagccactcactcccatggtcataccctagatcttgtcattactaataa
ctgcaactcctccataatctcaatttcaagcatccyactcttttaccacyacctcctatctttctagctc
actctctctggtgccctaactccaataatyctttgaccccaccgagacctmcaatccattgatctcatat
gcttttcactgtnccgtgtcctcttccctcctttcwttgctcagattccatggtcaatcattataatcac
tcccwtacanataccctcaactcccttgcccctytctcmctttgtcttacttrcttgncaaaaccacaac
cctggttaaatccaactntccgactaatttrcgcctgcacccgngcagctaaacatggctgragaaaaat
acacaaccatgctgactggtctcactttaaatttatgaccacgaacctcaagtgrgcccttaatgctgcc
aggcaattntactacatttccctagtccattcactctcccactctcctagatgactatttyatactttct
tnyttctcaaacctccaacayyyyytnccatctttactctcagctgatgaccttgcttcctatttcactg
agaaaatagaagcaatcagaagagaatttccacatgctcccaccaccacatctacccacctacctgcatc
tgtacccatatactctgccttccctcctgttaccgtggatgaactgtccgtgctcctatctaargccaac
ccctccacttgtgcactagatcccatcccctcttgcctactcaaggacgttgctccagcaattctcccct
ctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatataaacatgctgnnat
ttctcccatctttaaaaaacaaaaattctccctcgaccccacttccccctccagctaccgccctatttct
ctgctcccctttacagcaaaacttctcagaagagttgtctatactcgttgtctccacttcctcacctccc
gttctctcttaaacccactccaatcaggctttcgtccctaccactccactgaaactgctcttgtcaaggt
caccaatgacctccacgttgccaaatccagtggtcagttctcagtcttcatcttacttgacctctcagca
gcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacaccacac
tctcttggttttcctcctacctcactggccgttccttctcagtctcctttgctggytcctcctcatctcc
ccgatctctaaatattggagtgccccagggctcagtccttggacctcttctcttctctatctacactcac
tccctgggtgatctcatccagtcycatggctttaaataccatctatacgctgatgactcccaaatttata
tctccagcccagacctctcccctgaaytccagactcctatatccaactgcctactcgacatttccatttg
gatgtctaacagrcatctcaaayttaacatgtccaaaactgaactcctgattttcccccccaaacctgct
yctcccgcagtcttycccatctcagttaatggcaactccatccttccagttgctcargccaaaaaccttg
gagtcatccttgattcctctctttctctcacaccccacatccaatcyatcagcaaatcctgttggctcta
ccttcaaaatatatccagaatccgaccacttctcaccatctccactgcyaccaccctggtccaagccacc
atcatctctcacctggactactgcaatagcctcctaactggtctccctgctyccacccttgcccccctnc
agtctgttctcagcacagcagccagaatgatccttttaaaatgtaaatcagatcatgtcactccyctgct
caaaacccttcaatggcttcccgtttcactcagagtaaaakccaaagtccttaccgtggcctacaaggcc
ctatatgatctggcccccgcytayctctctaacctcatcttctaccactttccccctcgctcactctgct
ccagccacactggcctccttgctgttcctcgaacacgccargcwcgttcctgcctcagggcctttgcact
tgctgttccctctgcctggaacgctcttcccccagatatccacgtggctcactccytcacctcmttcagg
tctctgctcagatgtcacctyctcagagaggccttccctgaccaccctatctaaaatagcacacccyctc
ccccatcatgcccatytttcttaccycgctttatttttctycatagcacttatcaccatctgacayacta
tatwatttayttgtttgtttgtttrttgtctcctccacyagaatgtaagctccatgagggcagggatttt
gtctgttttgttcactgctgtatccccagcgcctagaacagtgcctggcacatagtaggcgctcaataaa
tatttgttgaatgaatgaat
>LINE2B|LINE2B  3'-end of L2 repeat (subfamily b) - a consensus.
tcccccttgctcactctgctccagccacactggcctccttgctgttcctcaaacacgccaggctctttcc
cgcctctgggcctttgcacatgctgttcyctctgcctggaacgcccttccccwctccttcancctggcca
actcctactcgtccttcaggkctcagctcaratgtcacctcctccaggaagccttccctgacttcccagg
ccgagttaggtgccctcctctgggcccccccggtcctaccctgccactctgggttatmattgtctgtkng
cangtctgtctcccccactggactgtgagctccgcgagggcagggactgtgtctgtcttgttcaccactg
tatccccagcgcctagcacagtgcctggcacatagcaggcgctcagtaaatgtttgttgaatgaatgaa
>LTR10A|LTR10A  LTR from endogenous retrovirus-like sequence (HERV-I).
tgttaagtacggtgagttctgagatcctctccaaagaaccagtatgtcagtatgttcagctcncctgttc
tttgttctccattttaaagtttaacttcagtatgttcagctcncctgttctttgttctccattttaaagt
ttaactcaacagttctaatcagtagttaacgcctgttcccctggtcacctgctccatcctgactcatccc
gggtcacctgctttgacctgagtcacccttagtcacctgctctgtaaccatccttcccgccaaactactc
accccgccactctggctcatacccctgctctctttaaaatagccaatcggaattagcttagactgtgcgg
tccaaccctagccaataggggaacgacacagcagtaggggctacctgcatcaggaataagaaccccttcc
cctcccttgtccaggtgtgctctcgccattgctccatctgcgagacgcacccttctatagaagtaaaatt
gccttgctgagaaaattaaatttatgtttgagtgctatttcttttgcggcaccgaaacgaaaattaaatt
tatgtttgagtgctatttcttttgcggcaccgaaactttatttataaca
>LTR16A|LTR16A  LTR16A repetitive element - a consensus.
tgtgacggacatgraggtgcgctgcccagatcccccttcaagaacggaartyttattncccyagctgctg
ggagwgctgtcggcagacagccctcagctgtcagccccttcaggaattgcctcngctgaagagagccgcc
tcgcccaaggtcacgccccctccccggggcagcccacatccaatgactgrtcaatrtggaggtataaagg
cccggccctctcgccccaactcgggacaactctgaagggccatyccagctccagagctccccgtggggtc
ggctgaggcctttgttgcgactgcattgcagcccaacttctccctctgcccaatcctgcttccttccctt
cccttccacaggcgttgatcccaagggcgctccctaataaacctcctgcacgctaatctccatctcagag
tctgcttcccggggaacccaacctgcaaca
>LTR33|LTR33  LTR from endogenous retrovirus-like sequence (HERVL33).
tgtgctggatatcttctgtttgcccctccagatccactctccacccttctccaccctgctctgtgccccg
ggaggctgacctctatggactgcatcamcgggctcccttgccctctggcttctggttgggtttggccaat
gggaggcactggcaggagattggagggtggaaggagagwgagatcggggtatttattccccyggctccct
ccctgctgggctgcggtttggcagtggctgcgttcctctaccgaaggccacagctcctgtcgggcagccc
tctccttgtagctacagctmcagctctctctgggttccggtaacmgctccctccccttgccccttcaggc
ctaggggtggtaacagctycccgctgttgctagccccggggtgcttcaccatcccttgttggtttccctt
aaccctgcccacacctttgtaaatagtcccttcattaaactctcctcaattactccatttgagtgtgcca
tctgtttcctgccgggaccctgactgataca
>LTR54|LTR54  Long terminal repeat - a consensus. 
tgttaaataaaatttataggaggccattgttttggactaagctcctgcactaggccccaacagaacagac
caaaccaaaatggagtcactcatgctaaagttccatgtcaccaagctgaaactaagttgtttatctgacc
ttccaagaaatcaggagagagagagagataacagccaaatccccaaacaggccagttttagccagcatga
taaggaagtcccctctgctttaacctttaacctaatgttaagcaatcagttacttntctattgttctgtn
tccctgtnttaaccttacaaggaaagtaactttgaaatgaccaatctgctttttgttctctgtttctgct
ttcttcagcccttttctgtctataaagccaacctcctctgctcagctcatyggaacactcattctatttt
atagaatgaggtrttgcccaattctagaatcacaaataaaagccaattgagatctttaaactaaatttgt
tgtaattttgtcttttgaca
>MER102|MER102  Interspersed repeat MER102 - a consensus.
gggttgcaaactcaaatgcctacaggggccaggcaggtaacataaatgagtgaagtgggccaggtgggga
ctgtggcaaactggagagcacatgccctgtctaaagggggcagcagctgctactcagctccagccaattg
ttgccatgtgggaatgtaggcccagtgttgccagatcttctgatttttcaagagaagccagaaatctaga
tttttatgtgaaatctcctgatttttaaatgttggcaactaatttaaaatttttawaaaacactgtgtag
gccaaacaaaacatatctgtgggccagatttagcccatrggctgccagtttg
>MER103|MER103  MER103 repetitive element - a consensus.
agttccatggtcaaataagtttgggaaatgctgggttaaacaaagttaaacaggtttctttactgcagga
cttctcagagcctttaatatgctaatgtgcattgtgaatctccaagaggggaaatatagtatgcagtrtt
tcccaaatttatttgaccatggaact
>MER104|MER104  Non-autonomous DNA transposon - a consensus.
taccatatttcattgaatctaagatgccatcaattgtaagatgcaccattattttatgtaccactaagaa
agaaaaaaatgctgccaattaaactataacatgccattaattgtaagatgcatcccaatttcagagatgt
taaaatgtgaaaaaatgtgcatcttagaatcgatgaaatatggta
>MER21B|MER21B  a consensus.
tcaacacacaacacttctgtcaccaaacgtgtggrrrtttttccccacacacaaacaaktcttcagttct
gcggcggacaccarctgggtgtcctccaattcarttcagttctgacactawctacctrgagatagcgtca
gatcccacaggtttaagggctcagtcccacaagactgcccccacttcagatrccagtcgcaagtctrggt
tktcacccgtacttctgaccaactggctataaattgttcccacgacccctctttaggttcgattaatttg
ctagaatrgctcacaraactcagggaaacacttatatttaycggtttattataaaggatattacaaagga
tacagatgaacaaccagatgaagagatrcatagggcgaggtmtgggagagtccngggnncaggagcttcc
gtgccctctctggstnnrccaccttccwggcacctccacgtgttcaccaacccggaagctctccgaaccc
tgtccttttgggtttttatggaggcttcattacgtaggcatgaytgattacatcantggccattgattat
caactcaacctycagcycctctccyctccccagaggttggagggtggggctgaaagttccaaccytctaa
tctgccttggtctttctrgcgaccagcycccatccwgragcntnctaggggctgcccrccakgagtcgmc
tcattagmacaaaagrncrtynctattacccaggarattccaagggttttaggagytctgtgtcaggaac
cggggtcaaagaccaaatattagat
>MER3|MER3  Nonautonomous DNA transposon.
cagcgctgtccaatagaactttctgtggtgatggaaatgttctatatctgcgctgtccaatacggtagcc
actagccacatgtggctaytgagcacttgaaatgtggytagtgcgactgaggaactgaatttttaatttt
atttaattttaattaatttaaatttaaatagccacatgtggctagtggctaccatattggacagcgcag
>MER31A|MER31A  a consensus.
tgacaaagattctctgcttgaccaaactttagtcaggctcctgaaccttctcctaggcccatctgtgcac
ttccttgtaaaatccagttttagcaaagaaccctgctaagtcagtttagcmagaaccccccacccttgat
atctgatcaccctcaatatctgatcgggttcctcatcctccaccatcccccaggtgatgtctgatcaccc
tggcctgtcttcagcaagaatcctgttaggtcggtttagccagaatccccctacccctgatgtttcctct
tagtaattttccatccactgacccctcaccctgctccttggctataaattcccacttgcccatgctgtat
tcggagttgagcccaatctctctcccccactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtcttccttaccatgctttaacaagtatcattgaataattttttctttaaca
>MER44B|MER44B  Nonautonomous DNA transposon.
cagtagtccctccttatccatgggggatatgttccaagacccccagtggatgcctgaaactrtggatagt
acygaacyctatatatactatgttttttccyatacatacttatgataaagtttaatttataaattaggca
cagtaagagattaacaatantaactaataataaaatagaacaattataacaatatactgtaataaaagtt
atgtgaatgtggtctctctctcaaaatatcttattgtactgtactcacccttnttcttcttgtgatgatg
tgagatgataaaatgcctatgtgatgagatgaagtgaggtgaatgatgtaggcattgtgatgtagcgtta
ggctactattgaccttctgatgtctgatgatatgtcagaaggaggatcatctgcttcaggtgatcctgga
tcattgagccatgacaatgtcgatggttggatgtcaggagcagacaatgtcgatgactaatgggtggrta
gcatatacagcntggatacgctggacaaagggatgattcacgtcccaggtrggatggagcaggacagtgt
gagatttcasccatcatgctactcagaacaatacacaatttaaaacttatgaattgtttatttctggaat
tttccatttaatattttcagaccacagttgacyatgggtaactgaaaccacagaaagtnaaaccayrgat
aagggagaactactgtaca
>MER5A|MER5A  a consensus.
cagtggttctcaaagtgtggtccccggaccagcagcatcagcatcacctgggaacttgttagaaatgcag
attctcgggccccaccccagacctactgaatcagaaactctgggrgtggggcccagcaatctgtgtttta
acaagcyctccaggtgattctgatgcatgctcaagtttgagaaccactg
>MER60|MER60  5' part of L1M subfamily.
tgcagrttgctagtgccagagggagcaaagaattgtgattgtggattttaattgctggcagctccctgaa
ggactcacaagtctttttttctcggctgaagtggttcaaaaacatttaaaggcacatttgctggagcaag
ggacaacatgrgrcaagcaayagatagaccaaaaagcctaagaaggaagagmtgagaaataagatgcttg
gggaaawaagggctttgaaaagtccacatattcctgggaatctagaaggccatgcacatgtccagggctg
gacacatgctcagaaaagacctaagaaggccctaagctttcacctctggctgaccttnagactctgtaca
agcaggaagtgaaggctaaggcagagttgtaaactgccttggctgagtgttgaaggaatgccycaacaca
cagmcaatctgcaaagactaggagactttttttttgtgtttggtddtkttgttgttrttccaggtattta
aggaaayctctgtcaawyactagctgaccactaagctaaycgarcagagacttcagtggccacacatgac
aaagaatacagactttacaaaattagtttagaaaagtcactaaacaaacaayacaacagcamayaayaag
caacaacaacaaaccctggaaaggggagagaatctgatttccagagttgccacattatawtatttaaaat
gtccagttttttttttcaacarcaacaaaaattatgaggcatacaaagaaacaaagaaaagtatggccca
tacacaggaaaaagaaattaatagaaactatccctgaggaagcccagacattgracttactagacaa
>MER63C|MER63C  MER63C repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaggwaatgymtkgatttgtgtattca
catatataagtttattataaattttactgatataaaggacgtrtagcacacaatttacaaataacaataa
aatatacaatattctttattgtaaattccatatagccagttgattctcacagaatgctttcgttgatttt
tgcccaaactcttgtatccgtagccgaactatgtttgtaattgacgaacaagtgtagttcnaacatgaat
gttggttgatattttcgtttatgttaatgagtaagatgaaagtgaaacaacgaagacgtatgtcagaact
tcactcatttgtcaatgatgtgagtgacttctttgctgaatcggatggtagttttcaaacattagaagaa
tattttctcaatttttggtgctattcgcaatgtaacagctacagacatgacacacttttaagtttaatct
gcatcattaacattttctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctga
tttgtagcgtttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccagcgtgat
gtcactgaatgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagat
acaatagacgtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatga
gttttgagtatttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttc
tttgtttttaatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccg
atacgagccagctccagcacaccactgg
>MER65A|MER65A  internal sequence MER65I belongs to the MER4I-group; subfamily MER65A.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER65I|MER65I  MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>MER68A|MER68A  MER68 LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcatctgggaacttggatttcgggagggttcccaccattcccwkaactgataagagtggct
cactgtgcctaaactgtttgtgcaaacaatatggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacgtgctaggcagagggtgcctacgtgaccagcccccartaaaaaccctgggcactgagt
ctctaatgagcttccctggtagacaacatttcacatgtgttgtcacaactcgttgctgggggaattaagc
gtgtcctgtgtgactccactgggagaggactcttggaagcttgcgcctggtttcctccggacttcgcccc
atgcgccttttccctttgctgattttgctttgtatcctttcgctgtaataaatcatagccgtgagtatga
ctatatgctgagtcctgtgagtcctcctagcgaatcaccgaacctgggggtggtcttgggaacccctaac
aca
>MER69A|MER69A  MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcataggccccttc
caaggccctgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgt
ataagcttcaggccccacaaaacctggatctgcccctgg
>MER69B|MER69B  MER69 repetitive element - a consensus.
cagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccacaattggttaagactgctgtctctttccactccgacttcccctccatcacacttcccc
tcatgtcgggtggtattggagtggccgtgggcatttttgggatctggctaagggaaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtataggaatggcttccaggaayattcctactgcccactgtgccgactcacccagc
gtcgtgacmtgaggcacaggaccggagrtcgtatcgcgatatgaacgtgtcctacggcacctggcaccgg
aagtatgcgggtagtggaggagaaacaaggtttgaaatgtacagagccagaagctagtctgtggaaaatt
cttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgatgcctagycagagcaga
agttctctcctgtcagaaatatactcgataatgcagcgtatacaattataaatgcamcatgcatttattt
gcatttttggaagggaatcatgcgaaatagaatttatcagaantccttgtttgtagggcacagatctrta
gcagtactacaaacagtgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgctgatatga
catgaaatwctgacgttaacgaagataacasttcacttctaatttaccatgacaaaaaagacatcagtga
caaactggttactgagtgtcattaattctaagagyatttaagattagtcactgcacaagaaaacttgaaa
tgccctgaaatcttacagctcatatatgaaagaaacttgataggggtttccccaaatttgacaacaattc
taaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaacttttctaaactatcaataat
aaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctatagaaaat
attacaaaatcgttgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaaaartat
tatagaagtgtgtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatgtttgtg
gtatttgtcaactttttaaaatttgtaatttgttgcgatttcttttctcattctaaataaatattcactt
ttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgtataagct
tcaggccccacaaaacctggatctgcccctg
>MER74|MER74  Putative long terminal repeat of endogenous retrovirus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER74A|MER74A  MER74 repetitive element - a consensus.
tgtattaaccatgttttttattttctgtattcttgatgctttgacatctggggccttgctgaccctggag
ggactgcccctcccagggctagccaattcctagagatagcaaacgactcgcctgggagcgcgcctttcat
atgcaaaccaaccaatccagagcccacacccccaaccacctcctttatcgggctctcacactctgggcca
ctatccccctgccctaatcaccccagggccaggtaccagacaactagggacagcccctataccccagagc
ccgctgaaattattcaaactagccaatcctaagcctgcttaccctgccttgcccattccttcccatggaa
accacaataaaggctcttgcccacgttttcccgtcgctccctctgcctcctgaccgaccctggtgcttcc
ccgtgtggccccccgtggcgtggcgtgcccccttctcttgggawctgtgagtaacaaactatcttttcaa
tggcagtcgtctcctgatctgttggccttaccatacctgaataataataaaacctacattttaaaaca
>MER77|MER77  MER77 repetitive element - a consensus.
actacggggggaggtgtcaaattcaaaggtctccaagacmaccctcctgtttartgattcgctagaagga
ctcacagaactcagaaaagccgttatactcacagttacggtttattacagtgaaaggatacagattaaag
tcagcaaagggraaaggcacataggncagngtccaagagarmcaggcacgrgcttccagttgtcctctcc
cggcggagtcgtrcgggcagcgcttaattctcccagcaacgrtgtgtgacagcacgcatgaagtattgcc
aaccagggaagctcacccgagccttggtgtccagagtttttrttgggggtcggtnanataggcatggntg
accccgcagcatggctgaccttggtcttctcaggcttgagccncccaagcatggctgacctnagttactc
agtctycagcccctccagargtcarryaccgtgtagcctaaggcccccaccataaatcacattgttagca
trractgtccggtatggcccaaggccytcgcagataaacaaagayactyttatcaggcaggacattccaa
gggcttagaggttatctcccarrgcctgaggataamcgagggccaganctttctttgggcaaggttaatc
ctttactgyayaagaccaca
>MER80|MER80  MER80 repetitive element - a consensus.
caggggttcttaaccttttttgtgccatgggcccctttggcagtctggtgaagcctatggaccccttctc
agaataatgtttttaaatgcataaaataaaatacataggattacaaaggaaaccaattatattgaaatac
agttatcaaaatattaaaaaaccaaatttgtgatatagtaatatatgtgcttctttattaatgcattaaa
taacaagatctagcggcgggtctaataactaccgtaatttcgaagtagtgatgagcataaatgatatttt
gagatatctgcaacaactgtaatgtgatatgaaaatatctgtgatttctattggtgacaaagtcacaggt
actgctaatactactgtggtttgttgcctacattcataattgaaggaaatgctaaatttcagttagaggt
tagtgaaaataaagatgtaanttttttccccatccaagttcacggaccccctgaattctatccatagact
ccaggttaagaacccctg
>MER82|MER82  MER82 repetitive element - a consensus.
cagttgatcctcattatccacagtagttatgttctataaagtcaccgcgagcactgaattagcgaatact
gaaccatcgctcctagaggaaatacagagttaggttcctgcaagcctctggtcacaacattttcatcaac
cgatcaatatataacyttgttttatgtgtgtttctgtttaaagacnncttatttaatatatattgttgat
ttattaacactgaactcacagccaacagcactataactcatgcctgaatgaagcttatctaacacacata
ttttctccataaggtacatcacagccttcttgtgcttaggaacaccagacagcacttcagcactatgctc
ggggccattttaaacggcgaaatcaccaacaaaaagcacaaaaatgtgaaaaacgtggcactaaatagac
ctcgaaaaggacgcttgtttacggtatgagagctgaaacaagaaggcagagcgtcgccttgttcgacctc
agctgggaacgtgcacgtcgggcgactcgaatttttcgctgctctgcgcatgtntgcaaatgaccgngaa
agtgctncaagtattgattttggggttacaaataaattttagcgagtaggcgaattcgcaaatacggaat
ccgtggataatgaggattgactg
>MER91B|MER91B  MER91B repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
catcacagatttgtataatgacaattttccaacagatggcagtaaagtgtcttgaggaaggggcgccttt
ttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>MER92C|MER92C  MER92C repetitive element - a consensus.
tgacaatgcwgaactttacctgagccctgtgctcccggaaaacagcgatggttaagaaatccccccatcc
ttttgtgttccnagaaacggcttaccgcaaagaactacccttccctatatgacttaaataagactctctg
ncccttctttctcacgacttccataagatcannnatgattccttncctgnnaagaccaaacacagacctt
tccccttttgcctgaacccgctgacaaggccagacacggaccctccaacttcctattctttgtttcataa
atgattagctgagattagaagngtctgtccccctgaaactagctagacacagagataaacatttcctgtt
cagctaaccgagacttcccctgattgcaaaacaaccccccctgtaaatctccccacntgaaacctatcta
ccccttcctataaaagtccaaggcaaaaccaccctgccgagacacttcatagtcttcggatcttggatgc
tctccctattgcaatagcctgaataaaatcatctccttamttgtctagtgcattttgtctttca
>MER97|MER97  MER97 repetitive element - a consensus.
caggcagtcctcgctttgcacggttccgatatgcatgaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccacggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactacataaataacagatgcgcatcatgatcagtga
ccaatcacatcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattcgaatcaaacgtaaatggagttatagaagaaatagctgaccgtgggaatgttgacac
tgccgccatttgagagactctagatatgcagccagaggaacttagtgaaggcgaacttatcgacataaat
gaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaagtgacgccagcaaaaaacttcacat
taaaggaactcttggagatatttcacgacattgaaagcgcaaaggataaaatgttggaagctgatccaaa
cttagaaaggagtatgacaatttgccaaggcatagaaaagatgcttactccgtatcgtaagttatataaa
gaagaagaaggcaagcactgttcaaactactcttgataagttttttttggtttgttttgataagtttttt
tacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattatagtgtactaaataaatat
tagttttattatttttttcattccctatacatttataaccgacggtaagagagtttttaatgtttttgac
aaaaatttttaaaggtcacggaacaattataattttcccattgattattaagatcgctttgcatggtttc
agcttgcatggtcatttttacggtcccgtactaccgtgcaaagcgaggactgcctg
>MLT1J|MLT1J  (MLT1j subfamily) - a consensus.
tgtggcagagactgctagttgtcccccaatatccattctccccttcttccttagtaatagaamccccaat
ttttagctgggcacatggccacccagaaataaagactacatttcccagcctcccttgcagctaggtgtgg
ccatgtgactttctaagttctggccaatgagatggtaagcagaagtgatgtgtgcaacttctaggaaatg
tccttaaagagaggggcaygcccttcttttccccttcctccttcctgctgcctggaatgtagatgtgatg
gctggagctctagcagccatcttggaccatgaggtgaaagccacatgctaaggatggcagagcagcaaga
tagaaggagcctgggtccctgagactatggagcagagctgccataccagccctggactgcctacctctag
acttctatatgagagagaaataaattctatcttgtttaagccactgttattttgggttttctgttacttg
cagctaaacctaatcctaacayacca
>MLT1R|MLT1R  MLT1- LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MLT2E|MLT2E  Interspersed repeat MLT2E - a consensus.
tgctggattgttctgttgtcaacttngttaagctnggaactatgtttcccagaatccccttccctgtatg
gttctgggttagagttggccaaagatgaaattgtggaagatttggaaggcagaagtgaagcagcagccat
tacactctgaaggtcatcattggttasaggcagtgagagatggccagatgcagaggtgcccaggaggttc
cagcttgtcctcactctcccctgctcyatatccagctcttcttcctgaccactggccctgctgaccaaca
gcarccccaggcccaccaccagatgcttggctgcaaactcacagaggtagtngccacacagagncaacaa
ctttccatagagttctccaccagctccccttcatggtcncacttyagcggctggatatgcttagcttcaa
atttccccacaagctccagnctcattcaactncgccagagctggttagtgaccctttttctgatccttca
actcccccctccagaccttcacttccccagctcctcccacaattgtataaggtctaattcctataataaa
tcccttattccatanatactacatagtggctctgcttccctgactganacctgactaataca
>MLT2F|MLT2F  Long terminal repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttggctaggctggaactacatttcccagaattcccttccctgtat
rkttccaggttagggtgggccacaagagacattctgtgtgagatttggaaggcggaagtgaagcagcagc
cattttgttttctgtgctcggagaggtcagagtcagcaggcgctgttgcagctcacacacgttgtcgctk
atctgctggctcacctcgttggcgtggggcagcagccgggcccgcagctgctccascttcccctggatcc
tccttcagcttctccgactcctgggccaggtgtgtgtktagctccgtgacgaagggcgccagcttctcct
gcaggacacccacatcatcgaggtcggaggcagtgagagactgacatgggttccagtttgtcctcgtggg
ttccagctcatgcttgtgggttccagcttgtccttgctctcccccactttatatccatcttcccttcctg
actgcctgccctgtggacttcaagctccagcatcagacgcaragacaacagccttacagagactgcttaa
ccagctcccacaattgcgtaaggtcaaatccctataataaatctcttattatatatatctcctagtggtt
ctgcttctctgattgaaccctgactgataca
>MSTAR|MSTAR  MSTa- LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>ORSL|ORSL  Origin of replication-like (ORS8) region (a consensus).
ycccatacygtttccrtcactrgtytgwgcaccctctgcarggmagacagcatgayttttyatctttgaa
tycyyaaaasttagctcactgtgtgctcaaacgtgtattgaatgacagttgctatatttgaggacbacat
agattttggggaagacggacaggcacactagcagaaccatacgaaggccaggatcagtcatgaccagggc
tgcattatgacttgtgggccctgagcacttttgcttttatgggccccttcctccataaaaatattaaaaa
ttatattttatgactgcattggtataaagatgagaatataatccaggctgaattaaaacattttcttaga
ctctaaaatttcatttttttctgattttaaaagaaattaaaacattttyatggggccctaaagtattgtg
ggccctaggcactgtgcctactgtgcctaatggataagtcnagcctgaccagggcactctggtgtgaggt
tgaagaaaggaaatttggaacaaagaagccaagtgctctggagaagcaggtgaaacttccactgccgaac
aaaatcagaatgggagcagccatggttaataaggttgtggaagtttagascttccagttcacttcmcctt

>RICKSHA|RICKSHA  RICKSHA repetitive element - a consensus.
gggtttggatcataatcccgaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatcctaaagtctaaatccctaaagtctaaaatccctaatgtctaaaatcccgaaaatcacaatca
cgaaagattaaaatctcaaatattgaaatcctgaaagccgaattctggggaagggattagtgcgttttcg
gttgtacgcaggatagttgcatcatgttagttgcatcatgttaggtggcagaactattaccttgttattg
tctttatttggaaattaagtatggtttaaggagacacgtatgggtgccaagttgacaaggagtggacttg
tggacttaattttaggtgtcaacttgactggattaaggaatacctagaaacctggtaaagcattattttg
ggtgtgtctgtgagggtgtttccagaggagattagtgtgtgagtctgagcggactaggcggggaagatct
gccctcaatgttggcgagcaccatccaatcggccgggggcccggagagaacaaatacagaaggcgaactg
gtctctctctgagagctgggacagatttttcttctgctgccttggacatcagaactctgggcttgctggc
tttggactccaggacttacaccagtcctnnnaaccgggtcctgaggctttcggacctcagactgagagtt
acaccattggcttccctggttctgaggcttttggacttggactgagccatactgccggcatcccagggtc
tccagcttgcagacggcctgtcgtgggacttctcagccaccataatcgcgttagccaattcttctaataa
attccctctcatrtatatatatatcatattggttctgtctctctggagaaccctgattaatacagatttg
gtattggggaagccgaatatcattccttcttactgtattccttacaacataatagaagagatctgtgaaa
ttgttccctcacaaaaaggctgtgataaaataagtggacgaggctactcaattgtgaaagataaaattta
aaagctaattattattggtgctgcaaaagcagaaaatcacttaattacaatggccgagcaataaccagct
tttaaatggacagcatatacttacaaaatttgtagaccacaaccactctgcaaatacacatgcagcaagt
gtcttgaagatggcaamartgaaaattcagtttaaaaatacawsaattscctgccaaattattcaatctg
tatgacttctacttctttacacaaaatttatgctatgtatttcatcttcgcatcatttccaatactggag
gtataaattgtgtagagacttttagagagttctaatttgttttatgcattttttgcaaatttgactccac
gaaagtgcattatcacaatgttgactttgtgtgtaagcattgtgcatgtatgtaaaaacgttgaaacttc
ctcaataaatgaagagatgtcctttttgtacatctgcatttgtgaaagataaaatttctcaagatcttgg
ctctttgggcgactgcatatgcggtggtgacccatcgcggtttttgatcgatctcgtcaaaagacttagg
ttgttcgtcacggtatttcagatgaccgcagttataaagctgggtgcacacaattaccaaccatagtgat
atgcgtttatacatttccctttttgacctatttctttatgaatacggttcgtctgctcataactgttata
cccgtgcgactgtcattagtatacctgagtgtttatgcttgcaaaaatatgtatgttattattgcctatt
ttattgtgtaaagtggcctatgaagtgttctgtcatgtttttatatgtttctcaaataaatcccctttta
aaaatgtaaataaattatcttttaaagaatttttaaattttttttcagaattatattttcgggattttga
tctttcgggatttcaacattcgggattatggcgtttgggattgtgtctttcgggattatgatccaaaccc

>TAR1|TAR1  Telomere associated repeat sequence, complete sequence.
gatcaacagtgaggaggtcccacaaggctaagtggggcaagtcggggacctaaggcagtagcaggaaaac
caaagaaaacaggcggagacttgagacagaggcaggaatgtgaagaagtccaaaataaaaatccctgcac
aggactcttaggctgttatcatgcactatcagcctactcctccctatttttgtacaataagctctttaca
ctgtatttcttttcaatgaagttatcttccatctttgtactgcctcttggtgaaaagctgtcttccaagt
taataactgggacatcagctctctgcagtaatagctccttttcagttttaatttgcagaactgatgggga
ttaataactggcgctctgactttaagtggtgcaggaggcggccagtaggggacgccagccgttacgccgg
gagcaagagggccctgcgtagtccccatctgcctgcatgtggcgtgcagccacgacaatggcagcaagag
ggcccggcagtgtgcccagctgccagcaggcgggtgtgctgccactataatgtgaggaagagggccctgc
aatgtccctagctgccagcaggcggcgtgccaccactatactgcgagcaagagagccctgccgtgccccg
gcgccagcagggggcgctggacagcactgtaagcaagagggccctgcagttgtcctagtcgccagtaggg
gacgcaatggcagagcaccgtgggcaagctggtcctgtagtgcccggctgcaagcagggggcgcccgaaa
cgggcttttcagattactcaggttccactcgtctctgcgccgccggggacgtgtgtctctgcgcgtgcac
cgcgccacccccgcgctccccgcccggcggcgcgcgactgtgcgactgcaacactccccgccaccctcag
cccagcgacgtgcgtctctgcgcctgcgccgcgcctcactcccgcccgctcagcgacccctcccttccgg
ggaggcgccggcgtgcgtctacgccctgcgccgcgtctccccaacagcggcgcgcctctctgcgcctgcg
ccggcgcgccgcgcctctctgcgcctgcgccggcgcgccgcgcctctctgcgcctgcgccggcgccccgc
gcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgc
ctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgc
cccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctc
tgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgcc
ggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgc
ctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcct
gcgccggcgcgccgcctttgcgagggcggagttgcgttctctttagcacacacccggagagcatcgcgag
ggcggagctgcgttctcctctgcacagacttcgggggtattgcgaaggcggagcagagttcttctcaggt
cagacccgggcgggcgggctgagggcactgcgagggtggagctgcgttctgttcagcacagacgtggggg
gcaccgtaaaggcggagcagcattcttctcagcacagacgttgggggtactgcctgcctttgggataact
cggggccgcatcgagggtgaataaaatctttcccgtttgctgccctgaataatcaaggtcagagaccagt
tagaacggtttagtgtggaaagcgggaaacgaaaagcctctctgaatcctgcgcaccgagattctcccaa
ggcaaggcgaggggctgtattgcagggttcaagtgcagcgtcagaactcaaatgcagcattcctaatgca
cacatgacaccctaaatataacaggcatattactcatggagggttagggttcaggttcgggttcgggttc
gggttcgggtt
>TIGGER5_A|TIGGER5_A  transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttaytgaatactgtactgaaagtraraaacagtatggttgtatgggtacttgaagta
cggtttctactgaatgtgtatcgctttcgcaccatcgtaaagttgaaaaatcgtaagttggggaccatct
g
>TIGGER5_B|TIGGER5_B  Non-autonomous DNA transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttactgaayayartacactgtagartayyggttgtttaccctcgtgatcgcgcggct
gactgggarctgcggytcactgycgctgcccagcatcgcgacagagtattgtaccgcatatcgcyagcct
gggaaaagatcagaaattcgaagtacggtttctactgaatgcgtatcgctttcgcaccatcgtaaagttg
aaaaatcgtaagttgggaaccatctg
>ZOMBI|ZOMBI  Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>ZOMBI_B|ZOMBI_B  transposon - a consensus.
caggttgagcatccctaatctgaaaatccgaaatccaaaatgctccaaaatctgaaactttttgagcacc
aacatgatgccacaagtggaaaattccacacctgacctcatgtgataggtcacagtcaaaayacaatcaa
gactnnncnagcnnctncngttgctnttnctgccagncaacnacagnttgtgcacctngntggcaragan
actgacacatttgctttctkatggttcagtgtacacaaactttgtttcatgcacaaaattatttaaaata
ttgtataaaattaccttcaggctatgtgtataaggtgtatatgaaacataaatgaatttcgtgtttagac
ttgggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaatctgaaatc
caaaacacttctggtcccaagcatttcggataagggatactcaacctg
>ZOMBI_C|ZOMBI_C  transposon - a consensus.
caggtccacaatcccttatctacaattctaaaatccaaaaagctctgaaaactaaaagtttttttataat
ttgaaactcatttggcagcaaaacctgacctgaactgatatgaggctatttatagtctttatttatccca
cttagtgtgaatattcatatatttcactgcagaaatattaatgtgtttgattatagggtgctgccccaga
ccccactgggggtgttatataatatatagtatatgcactatattacctttctaaaatctaaaaaattctg
aattctgaaacacatctggccccaaggatttcagataagggattgtggacctg
>MULV|MULV  Murine leukemia virus.
[encoded data, 7668 characters]
aatcgcgtgaataaaagattttattcagtttccagaaagagggggg
>LTRIAPEY|LTRIAPEY  LTR from IAPE-Y retroelement.
tgtggagagccggtacgtgatgcaagcaattacgtgcgtgccgccagtaatctctgagaagagccatgtg
tgccgtgagcaatcaccattataagatggtgcgggcctccacagtgcctaactagtaaacaagccttgta
cgcaggtgcgagagtgaattcactcctattcactcccattctcggggtgtaatagtggggtgatgggcaa
gcaatgaatcaggagctgtctagccatatcaggtgctgaaacgtcacactgctggttataaaagcagtgc
cattttcccggatcggatcttggtgagaagcaagcaataaagctcttgctgaggaagattctggtttgtt
gcatctttcttgctggtcgagctggacgcaata
>IAPEYI|IAPEYI  An internal portion of IAPE-Y LTR-retroelement.
[encoded data, 7597 characters]
ttaataaaataaaaaggggaaga
>L1M2_5|L1M2_5  L1M2_5 LINE1 repetitive element - a consensus.
caaagaaatgtatktatgcaggagggcttcaagatggctgactagaggcakccggtactcgcctcctcca
caaagaagaaccaaaatagcgagtagataatcacacttcgaatagakcatctaagagagaacactggaat
tcaacagagaagcgacaggaaacacctaaagcaaggaaggagaaggaagcgaggcagcctgctcggccgg
gattggctgggagccaggagaggctccccaatgcggggaaagggtaagtgagagacccccagcggtccac
attcccaccacggactcctgcaatcctagccacgagagagcccctcaaccctcgcgggccctgagactaa
catagggagctgcctggagwccgcgcganggcattgctccagagagggagctcacgctgggtcccacama
cccccaagwcctaagcagctgcagcacggcgccattttgagagcccagccmccaccagactgcatcctgc
cctggggcccaacagcccctgcatctccacattcctggagccccastgacatnccccacccatggctgca
gctgctggggcaraggcaggaaccactggcagcaancccwcccctgcccagcagaggggtggccatacaa
tttcatryacaccaaggacaaattcccctgmctgcaaatgctaccactgngagctgctgtggagctgagg
yacgagcaatgcacncgctacccaggcgcctgcctatggctgctnccacwgaaagcaaccccaccctccc
cagcagcagggccacagtgcagccactgctgccctccacctgagcattccaccaggggcctggggatcac
cctgcccctgcctaccacagccggcgcctgcacacaccaccggggggcctgaggacaggcctgcccggcc
cagctctgccacacccmccagtgcccaagcacgccatctaggggcctggggatcgcccaacccagtccac
caccgctggcacctgagcactcctcctgggggcctgaggacgggcctactcagcctgccactaccaccac
agctggcacccacccacatgcgccacctgsrggcctggggactggcccgcccagcccgtcgcagccactg
ccaacaccaacacgcactgcttgggacccagagggttgtcccaccactgctactgccatcgcccatgcca
tgcyngctgcccaggggctcaagaacctgtccacccacccggcccaccgctgccactactggcacccaag
caagccacctggaggcccaagaatcggcctgcctggacccgctaacaccagtgccaatatatgccaccct
ggggcccaaggacaggcacactcagcccactantgccaccactggggcctgaagactggcccacctggca
tcccagtccccagcaaaacttcaccacagcctccactaacaaccacaccctaagccactgaggaaatcac
agacaccactgatgctgtttacagccaaagaaatcatacggagactacactactgcacgcacccagaatc
aaagccaaagcgccctacccaaccaacaccatagatacatctwcaggaaaaagtccttccctacgaaagc
tamtccataaaattggaagaagcgactgttacaccagatgtgcagatatcaacgtaaggacacaagaaac
atgaaaaagcaaggaaacatgacacctccaaaggaacacaataattctccagtaayagactccaawnaaa
aagaaatctatgaaatcccmgawaaakaattcaaaatgatgatattaaagaagctcagtgagatacaaga
gaacwcagawaaacaatacaaggaaatcaggaaaacaattcakgatatgaatgagaaatttaccaaagag
atagatatcataaaaaagaaccaaacagaaatcctggaactgaagaattcawtgaatgaaatamaaaata
catttgaaagcttcaanaatagactagatcaagcagaagaaagaatctcagaacttgaagacaggtcttt
tgaaataacccagtcagannnwaaaaaawaanaataaaaaagaatgaasaaagcctatgtgacatatggg
acacmattaagcgaacaaatatttaaattwtgggwgttccagaagaagaagagntgggnaaaggcnyaga
aaacctatttaataaaataatagctgaaaacttcccaggtttagcaagagattnagacatccagatacag
gaggctcanagatccccaaatagatncaacgcnaaaagggcctctccamggcacattatagtcaaactgt
caaaagtcaaagacaaagaganaattctaaaaacagcaagagaraagcatctagtcacatataagggaat
ccccatcagactaacagtggatttctcagcagaaaccttacaggccaggagagaatgggatgacatattc
aaagtgctgaaagaaaaagcaaaactgccagccaagaatactatacccagcaaagttatccttcaaaaat
gaaggagaaataaagtctttcccagacaagcaaawamtgagggaattcgtcaccactagaccggccctac
aagaaatgctcaagggagtcctamacctggaagcaaaaggacgatatctaccatcatgaaaacayacaaa
agyataaaactcactggtagagcaawcacacaaakgagaaagagaaaggaatcaaatgktaccactacag
aaawccaccaaaccacaaaganaaacaatgagaggaaacaaaagatatacaaaacaaccagaaaacaatt
aacaatatgacaggaacaagwcctcacatatcaataataaccttaaacgtaaatggattaaatttcccac
ttaaaagatanagactggct
>L1MCB_5|L1MCB_5  L1MCB_5 LINE1 repetitive element - a consensus.
tgacatgtaangagcttggaagttggcactcccttcaacaacaacaaaaagntgaacaaacagaaaaatc
aatgacttttcttagatccataagagaagtgaggtcacagggcaaactgtcancctgaaatctggagaga
caggcgcatgcagagaatcacagcagagctctgctttcctgaagcagaagcctctgggagcacaagctgg
taggaaaacttaaatggtaattttggcaaattgctagaggctgagtgtggactagtttgagagtaagaaa
ttctcggnggcccagtctaggggaacctccacactttcgtgggctttacctccaggagtcccactagttt
ctcacagtgaagatccgagaaanttcgcttcacggctctggcagggggaggggaaaagcaatcattktga
aatacgcccagagtattctccgtaacaaactcttgccctacaggagaaaatactttgccagagccttatc
ctagctttagggaagggtaatcacccaactccagccccctctagccttcctgtctcacctaaagggagaa
aaaaagctaagaaacacttgtgaaggtcacagcccagggactcaggcccactaaaagactgagatttaat
cataggattatagaacgtttcccttccccmataccttaccaccacatcaacagggctccagtataataac
aatggattacagctgaaagaactgcaaaacmcagactctatttaagaaggagctnctagggaaacccaaa
gacaggagaggagacaaaaacaaggacaccggagtraagtttagcctctgacacctacagctacagcaaa
cagtaaacacagtctaactcttagccagataaacataaaacctcacattaaaggcctatttacttcagtt
ccttttacccagtacatcatgtccggctttcaacaaaaaattacaaggcatactaaaaggcaaaaaaaaa
aaacacagtttgaagagacagagcaagcatcagaaccagactcagatatgacagggatgttggaattatc
agactgggaatttaaaataactatgattaatacgctaagggctctaatggaaaaagtggacaacatgcaa
gaacagatgagtaatgtaagcagagagatggaaactctaagagaagaatcaaaagaaaacgctagaaatc
aaaacat
>L1ME_ORF2|L1ME_ORF2  Primate L1ME LINE1 repetitive element - a consensus.
atggcagacntaaancctaacatatcaatrmttacattaaatgtaaatggattaaacactccaatcaaaa
gatacagattgtcagagtggataaaaaaacaacacccaacaatatacwgcctatmagagacacaccttaa
atataaagacacasataggttgaaartaaaagaatggaaaaagatataccatgcaaatwgtaaccaagag
aaagccggagtggctatattaatatcagacaaagtagactttaaaccaagaaatattactagagataaag
agggacatttcataatgataaaagggtcaatctatcagaaagacataacaatcctaaatatatatgcacc
caanatcagagcaccaaaatacataaagcaaatactaatagaactgaaaagagaaatagacaaatccaca
ataatagttggagacttcaataccccactgtcagtaattgatagatcaactagacagaaaatcaataagg
atatagaagacttgaacaacactatcaaccaactggacctaattgacatattatagaacactccacccaa
caacagcagaatacacattcttytcaagtgcacatggaacattcaccaagatagaccatatgctrggcca
taaaacaagtctcaataaatttaaaaaaattgaaatyatacaaagtatgttctctgaccacaatggaata
aaawtagaaatcaataacaaaaagatactctggaaaatncacaaatacttggaaattaaacaacatactt
ctaaataactcatgggtcaaagaagaaatcaaaagagaaattaaaaaatattttgaaataaatgaaaatg
aaaayacaacatatcaaaaatttatgggatgcagctaaagcagtgcttagagggaaatttatagcattaa
atgcctatattaaaaaagaagaaagatctcaaatcaataacctaagtttccaccttaagaaactagaaaa
agaagagcaaattaaacccaaagtaagcagaagaaaggaaataataaagattagagcagaaataaatgaa
atagaaaacagaaaaacaatagaaaaaatcaataaaaccaaaagttggttctttgaaaagataaaattga
caaacctttagctagactaaaaaaaagagagaagacacaaattactaatanatcagaaatgaaagaggag
ayattactacagatyctacagaaataaaaaggataataagagaatactatgaacaactttatgccaataa
atttgataacctagatgaaatggacaaattccttgaaacacacaaactaccaaaactgactcaagaagaa
atagaaaatctgaatagacctataactattaaagaaattgaatcagtaattaaaaaccttccaacaaaga
aaagtccaggaccagatggcttcactggtgaattctaccaaacatttaaagaattaataccaatcctact
caaactcttccaaaaaatagaagaggagggaatacttcctaactcattctatgaggccagcattaccctg
ataccaaaaccagacaaagacattacaagaaaagaaaactacagaccaatatccctgatgaacatagatg
caaaaatcctcaacaaaatactagcaaancaaatccaacagcacatgaaaaggattatacaccatgacca
agtgggatttatcccagggatgcaaggctggtttaacatayaaaaatcaaycaatgtgatwcactacaty
aacagrntaaaggagaaaaatcatatgatcatctcaatagatgcagaaaaagcatttgacaaaattcaac
atccattcatgataaaaactctcaataaactaggaatagaaaggaacttcctcaanataataaaggnmat
atatgacaaacctacagctaacatcatacttaatggtgaaaaactgaaagcwtttcccctaagatcagga
anaagacaaggatgtctactctcaccatttctattcaacattgtactggaagtcctagccagtgcaataa
ggcaagagaaagaaataaaaggcatacagattggaaaggaagaagtaaaactgtctttattkgcagatga
catgattttntatatagaaaatyctaaagaatccacaaaaaaacwactagaactaataaataaatttagc
aagntcncaggatacaaggtcaatatacaaaaatcaattgtatttctatatactagcaacgaacaatntg
aaaatgaaattaagaaaacaatwccatttacaatagcatcaaaaaaataaaatacttaggaataaattta
acaaaatayatrcaagacttgtacgctgaaaactacaaaacattgatgaaagaaattwaagaagacctaa
ataaatggagagatataccatgttcatggattggaagactcaatattgttaagatgkcaatactccccaa
attgatctatagattcaatacaatcccaatcaaaatcccaatggttttttttgtagaaattgacaarctg
attctaaaatttatatggaaatgcaaaggatccagaatagccaaaacaattttgagaaagaagaacaaag
ttggaggactcacattacctgatttcaaaacttactayaaagctacagtaatcaagacagtgtggtattg
gtataaggatagacatatagatcaatggaacagaatagagaacccagaaatagacccacacatatatggt
caaytaatttttgacaaaggtgccaaggcaattcaatggggaaagaatagtcttttcaacaaatggtgct
ggaacaactggatatccatatgcaaaaaaatgaasttmgacccctacctcacaccatatacaaaaattaa
ctcaaaatggatyatagacctaaatgtaaaanctaaaactataaaactyttagaagaaaacataggagaa
aatcttcgtgaccttgggytaggcaawgatttcttagatatgacacmaaaagcacaagcaacaaaaggaa
aaattgataaattggacttcatcaaaattaaaaacttctgctcttcaaaagacacyatcaagaaaatgaa
aagacaagccacagactgggagaaaatatttgcaaawcatatatctgacaaaggacttgtatccagaata
tataaagaactcttacaactcaataataaaaagacaaataacccaattaaaaaatgggcaaaggayttga
acagacatttcwccagagaagatatacaaatggccaataagcacatgaaaagatgctcaacatca
>MER44C|MER44C  Nonautonomous DNA transposon.
cagtagtccccccttatccacgggggatacgttccaagacccccagtggatgcctgaaaccacggatagt
accgaaccctattgctatcagtcttttggaacatgtttctgttcatgtcttctgcccacaaatttaatgc
ctcttccacctcaactaaacacgtatcatgcactccggccatcacttttgcagtttgaggtatgacatca
aaactagcatgaatttatttttccttcttcacaattccaaagatggaagattctttcttaccgtagatct
tagcaacctcagcatacgattatttttcytttctttttaagtcaagaactttcaccttttcgcttaaagg
aagcactttacagcttctytttggcatgtccgaattgccaccaacactactcttgtgcttttgggccatt
attaagtaaaacgggagttacttgaacacaagcactgtgataccaagacagtcggtctgataactgagat
ggctactaagtgattaacaggcaggtagcgtanacggcgtggatacgctggacaaagggatgattcacat
cccggatgggacggcgcgaaatttcatcacgctactcagaacggcgcgyaatttaaaacttatgaattgt
ttatttctgnaattttcaatttaatattttcggaccgcagttgaccacgggtaactgaaaccacagaaag
traaaccacggataaggggggactgctg
>MER67A|MER67A  internal sequence belongs to the MER4I-group; subfamily MER67A.
tgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcctcaa
cctcggcctataaagacttgaacaaacactaacatagtttctaatagctcaaggccacatccctaggatg
accctagcccccccttaaagtgcctgcctgagaaaactcaaggctgccaaaataatttactgtttgttcc
agccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaacttcgataag
cgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcacttccc
tgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcacc
tctgcacaaatcgaagctgagctcagttcacgctggactcttttccctactgcaatagtatattactgat
taaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67C|MER67C  internal sequence belongs to the MER4I-group; subfamily MER67C.
tgtaagggcaaatacaaattaaaaataagaggcttnaattctccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgaa
atgtatgtaaatctttttaaaagctaaataagcctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaawcatcaaggaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaacttcagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
atgagaagtttatttttcctttggataaagccaattagctaacacagatggccaccccaattaccaggtg
aatttaggatgaactatgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtstt
tgcaatctcttagcagattgcctgtgatgcgcatcacattctggtttaatgcttattcaataataaaacg
tgttttctttctcttctacctttgtggagaggttttctgggttgggagragattttgtttttaattatat
ttccccaaca
>MER90|MER90  Long terminal repeat from endogenous retrovirus.
tgagaaagagaaaagcagcccctgacatctgagagctggcctggtaccnwcagctaggccttggtgttgc
tgggagctggcctggcactcacagctaggccttggtgttctcctgttgaacataaacaatttcacagaat
atcaacatcagacaaggccactctgtgaccatgatggatcgagacaaaaacaagaccactccgtaatcat
gtctgaacacagacaaaaacatgaacattgtccaagccacaaaaatgaccaagcatccccctctcccggc
taatatgagtgactgctgcttctttaccaattacagctttagcctcgctctagtcttccctccttctaga
taagatttattaagatacccaatcacagaattactcccgcttcctgacagcatccaatccagagcaaagc
ttcgcttccttaaaccctcccccaaatcacctaacacaagcccaaatcctataataagtcctttctaaca
tcctcttactgagacgccccgtggttccccatggtgtgcgttctccctcgctgcarcgagcaataaaccc
aacttgttcaaccacaggtgtgttcctggtggtctttggctggagggcactgaca
>MER94|MER94  MER94 repetitive element - a consensus.
tagggtgaccatataatttatcgtccaaaccgggacacttttgagagtgaaagggggcgctattaataat
tacgccaggacaacaggyataaaccaggactgtcccaggcaaaccgggacatatggtcacccta
>MLT2C2|MLT2C2  Interspersed repeat MLT2C2 - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacaycagtct
agatgttgctgtgaaggtattttrtagatgtgattaacatttayagtcagttgactttaagtaaaggaga
ttaccctccataatgtgggtgggcctcatccaatcagttgaaggccttaagagcaaagactgaggtttcc
cgaggaagaagaaattctgcctcaagactgcaacgtggaaatcctgctgntttwccagcctccaagcctt
cggactcgaactgcaacatcarctcttscctgggtctccagcctgccggcctaccctgcagatttcggac
ttgccagcctccacaatcgcgtgagccaattccttaaaataaatctctctctacacacaccctattggtt
ctgtttctctggagaaccctgactaataca
>MER117|MER117  Putative non-autonomous DNA transposon.
cagggatggcaaataggtttcatctcatgtgycaactctgatcgattggtagtggctgcctggagtgctg
tgttgagaaggattctgaggctgyatctgggctcagtgggaaagagtgctgtgattgattagtgatgtct
gccatgggcacaggagggggaagtagcagcanatatgctatgtatttgccatccctg
>IAPEZI|IAPEZI  An internal portion of a recent strain of IAP provirus.
[encoded data, 6461 characters]
taaaaggatagggggaga
>RLTR10C|RLTR10C  Long terminal repeat of endogenous retrovirus.
tgtgggaagccacatgtgccgttgcagagtggcactgactactgctggccaccacgcataagtttggaca
aacaaccaatgtgtacatatgcagtaaagttttttgcaaagacactgcctggcccgggcatgataatgag
gttctgtaaggtactgagagagtataaccaatcagatgtgagacatgcaaatgaggtatgataatgaggt
tctgtgaggtactgagagagagtagccaatcagatgaggaacatgcaaatgaggcttagtgcataaccaa
tccgggtgtgagacacgcctctcctaggcctatataagcagcaccagttctgggctcggggtcttttcgc
ctctgcaatcaagctctcccaataaacgtgtgcagaaggatcctgttgcagcgtcgttcttgctggccaa
gtcgrgcgcgcaca
>B1F|B1F  B1F repetitive element - an old subfamily consensus.
gccaggcatagtggcacacacctgtaatcccagcacttaggaggctgaggcaggaggatctgctgtgagt
ttgaagccagcctgggctacatagtgagttccaggccagcctgggctacacagtgagaccctgtctcaaa
aaacaaaaaaa
