>ALU   Human ALU interspersed repetitive sequence - a consensus.
ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggaggatcacttgagc
ccaggagttcgagaccagcctgggcaacatagtgaaaccccgtctctacaaaaaatacaaaaattagccg
ggcgtggtggcgcgcgcctgtagtcccagctactcgggaggctgaggcaggaggatcgcttgagcccggg
aggtcgaggctgcagtgagccgtgatcgcgccactgcactccagcctgggcgacagagcgagaccctgtc
tcaaaaaaaa
>MIR   Mammalian-wide interspersed repeat (MIR) - a consensus.
acagyayagcatagtggttaagagcacggrctctggagccagactgcctgggttcgaatcccggctctgc
cacttactagctgtgtgaccttgggcaagttacttaacctctctgtgcctcagtttcctcatctgtaaaa
tggggataataatagtacctacctcatagggttgttgtgaggattaaatgagttaatayatgtaaagcgc
ttagaacagtgcctggcacatagtaagcgctcaataaatgttrgytattatt
>L1PA2   3'-end of L1 repeat (subfamily L1PA2) - a consensus.
ctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaatg
ctcatcatcactggccatcagagaaatgcaaatcaaaaccactatgagatatcatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttac
actgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctaga
actagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgc
tataaagacacatgcacacgtatgtttattgcggcactattcacaatagcaaagacttggaaccaaccca
aatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaatgatgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctcagtaaacta
tcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatg
gacacaggaaggggaatatcacactctggggactgtggtggggtggggggaggggggagggatagcattg
ggagatatacctaatgctagatgacgagttagtgggtgcagcgcaccagcatggcacatgtatacatatg
taactaacctgcacaatgtgcacatgtaccctaaaacttaaagtataataaaa
>L1PA7   3'-end of L1 repeat (subfamily L1PA7) - a consensus.
ctaatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagt
gggcaaaggatatgaacagacacttctcaaaagaagacatttatgyagccaacaaacayatgaaaaaaag
ctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccatctcaygccagttaga
atggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttac
actgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctrc
tataaagacacatgcacacgtatgtttattgcagcactattcacaatagcaaagacttggaaccaaccca
aatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccat
aaaaaaggatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaacta
acacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgaacaatgagaacacatg
gacacagggaggggaacatcacacaccggggcctgtcggggggtggggggctaggggagggatagcatta
ggagaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccatggcacatgtatacctatgt
aacaaacctgcacgttctgcacatgtatcccagaacttaaagtataataata
>L1PA11   3'-end of L1 repeat (subfamily L1PA11) - a consensus.
ctaatatccagaatstacaargaacttaaacaaatttacaagaaaaaaacaaamaaccccatcaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatwtatgtggccaataagcacatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcayrccagtcaga
atggcaattattaaaaagtcaagaaacaacagatgctggygaggctgtggagaaataggaatgcttttac
actgttggtgggaatgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgrgtatatacccaaaggaatataaatcattctat
tataaagacacatgcaygtgtatgttyattgcagcactattcacaatagcaaagacatggaatcaaccya
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaagaatgagatcatgtcctttgcaggaacatggatggagctggaggccattatccttagcaaacta
aygcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaacgatgagaacacatg
gacacatggaggggaacaacacacactggggcctgtcggagggtggagggtgggaggagggagagcatca
ggaaaaatagctaatggatactgggcttaatacctgggtgatgggatgatctgtgcagcaaaccaccatg
gcacacgtttacctatgtaacaaacctgcacatcctgcacatgtaccccggaacttaaaataaaagttga
aa
>L1PA15   3'-end of L1 repeat (subfamily L1PA15) - a consensus.
ctaatatccagaatstacaargaacttaaacaaatttacaagaaaaaaacaaamaaccccatcaaaaagt
gggcaaaggacatgaacagacacttctcaaaagaagacatwtatgtggccaataagcacatgaaaaaaag
ctcaacatcactgatcattagagaaatgcaaatcaaaaccacaatgagataccatctcayrccagtcaga
atggcaattattaaaaagtcaagaaacaacagatgctggygaggctgtggagaaataggaatgcttttac
actgttggtgggaatgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctaga
accagaaataccatttgacccagcaatcccattactgrgtatatacccaaaggaatataaatcattctat
tataaagacacatgcaygtgtatgttyattgcagcactattcacaatagcaaagacatggaatcaaccya
aatgcccatcaatgatagactggataaagaaaatgtggtacatatacaccatggaatactatgcagccat
aaaaaagaatgagatcatgtcctttgcaggaacatggatggagctggaggccattatccttagcaaacta
aygcaggaacagaaaaccaaataccgcatgttctcacttataagtgggagctaaayattgagtacacatg
gacataaagaagggaacaacagacactggggcctacttgagggtggagggtgggaagagggagaggatca
aaaaactacctatcgggtactatgcttattacctgggtgatgaaataatctgtacaccaaaccccagcga
cacgcaatttacctatataacaaacctgcacatgtaccccctgaatctaaaataaaagttaaaa
>L1PB1   3'-end of L1 repeat (subfamily L1PB1) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgaggatgcaaa
ggcgtaagaatgatacaatggactttggggactcgggagatcgggrgaaagggtgggaggggggtgaggg
ataaaagactacaaattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcacaaatcac
cactaaagaacttattcatgtaaccaaacaccacctgttccccaaaaacctattgaaataaa
>L1PB3   3'-end of L1 repeat (subfamily L1PB3) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgggtatatacg
ggcatatagagtggtataatagacaytggagactcaaaaggtggagggtaggagaggggtgagggatgaa
aaattacctattgggtacaatgtwcactattcgggtgatgggtacactaaaagcccagacttcaccacta
yacaatatatccatgtaacaaaaakgcacytgtaccccctaaatytataaaaataaa
>L1MA2   3'-end of L1 repeat (subfamily L1MA2) - a consensus.
ytaatatccagaatmtataaggaactcaaacaaatcaacaagaaaaaaacaaataatccmattaaaaart
gggcaaaagacatgaayagacatttctcaaaagaagacatacaaatggccaacargyatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaacyacaatgagatatcatctcaccccagttara
atggcttttattaaaaagacaaaaaataacaratgctggygaggatgtggagaaaagggaactcttayay
actgttggtgggaatgtaaattagtacarccaytatggaaaacagtttggagrttyctcaaaaaactaaa
aatagarctaccatatratccagcaatcccactrctgggtatatayccaaaagaaaggaaatcagtatat
yaaaragatacctgcactcccatgtttattgcagcactattcacaatagchaagatttggaatcaaccta
agtgtccatcaacrgatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgaratcytgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agycargmacaraaagacaaacaytgcatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtnggaggattggggggng
gkgrrgagggatggttaatgggtacaaaaaaatagttagaaagaatgaataagacctagtatttgatagc
acaacaaggtgactatagtcaataataatttaattgtacattttaaaataactaaaagagtataattgga
ttgtttgtaacacaaaggataaatgcttgaggggatggataccccattttccatgatgtgattattacac
attgcgtgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaat
taaaa
>L1MA5   3'-end of L1 repeat (subfamily L1MA5) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaataccgcatgttctcactcatatgtggaagctaaaaaagttgatctcata
gaagtagagagtagaatagtggttactagaggctgggaagggtagggrgaggggggratagggagaggtt
ggttaawggrtacaaaattacagttagataggaggaataagttctagtgttctgtagcaccgtagggtga
ctatagttaacaayaatttattgtatattttcaaatagctagaagagaggattttgaatgttcccaacac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacawtgtatac
atgtatcgaaatatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaa
>L1MA9   3'-end of L1 repeat (subfamily L1MA9) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgatctcacttatatgtggaatctaaaaaagtcaaaytcata
gaaacagagagtagaatggtggttaccaggggctggggrakgggggaaatgggaagatgttggtcaaagg
gtacaaagttkcagttatgtargatgaataagttctrgagayctaatgtacagcatggtgactatagtta
ataatactgtattgtatacttgaaatttgctaagagagtagatyttaagtgttctcaccacanacaaatg
gtaactatgtgaggtgatggatatgttaattagcttgaytgtggtaatcatttcacaatgtatacatata
tcaaaacatcacgttgtacaccttaaatatatacaatttttatttgtcaattatacctcaataaagctgr
aaa
>THE1B   a consensus.
tgatatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacgtgtcg
tgggagggacccggtgggaggtaattgaatcatgggggcgggtctttcccgtgctgttctcgtgatagtg
aataagtctcacgagatctgatggttttataaaggggagttyccctgcacangctctcttgcctgccgcc
atgtaagacgtgmctttgctcctccttcgccttcygccatgattgtgaggcctccccagccatgtggaac
tgtgagtccattaaacctctttyctttataaattacccagtctcgggtatgtctttattagcagcatgag
aacggactaataca
>MSTA   a consensus.
tgatatggtttggatctgtgtccccacccaaatctcatgttgaattgtaatccccaatgttggaggtggg
gcctggtgggaggtgattggatcatgggggcggattyctcatgaatggtttagcaccatccccttggtgc
tgtyctcgtgatagtgagtgagttctcatgagatctggtcgtttaaaagtgtgtggcacctcccycctct
ctctcttgctcctgctctcgccatgtgacgtgcctgctcccccttcgccttccgccatgattgnaagctt
cctgaggcytccccagaagccgagcagatgccagcgccatgcttcctgtacagcctgcagaaccgtgagc
caattaaacctcttttctttataaattacccagtctcaggtatttctttatagcaatgtgagaacagact
aataca
>MSTC   a consensus.
tgctacggtttgaatgtttgtcccctccaaaactcatgttgaaacttaatccccaatgtggcagtattga
gagrtggggcctttragaggtgattgggtcatgagggctctgccctcatgaatggattaatggattaacg
tattaatggattaattggttatcacgggagtgggatcggtggctctatcataaaarycattttgnctctc
gnrtgngccccttcttgccctttcacgccttccgccatgttatgacagagcacaaggccctcaccagaaa
ccagatgcagccgccatgatcttggacttcccagcctscagaaccgtgagcaaaataaacctcttttctt
tataaattacccagtctatggtattccgttaaagcagcacgaacggactaagaca
>MLT1A   (MLT1a subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>MLT1B   (MLT1b subfamily) - a consensus.
tgttatgggctgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gactgtatttggagatagggtctttaaagaggtaattaagttaaaatgaggtcattagggtgggccctaa
tccaatatgactggtgtccttataagaagaggaaattwggacacagacacgcacagaggraagrccatgt
gargacacagggagaaggcggccatctrcaagccaaggagagaggcctcagaagaaaccaaccctgccgr
caccttgatctcggacttcyagcctccagaactgtgagaaaataaatttctgttgtttaagccacccagt
ctgtggtactttgttacggcagccctagsaaactaataca
>MLT1C   (MLT1c subfamily) - a consensus.
tgttatgggttgaattgtgtccccccaaaattgatatgttgaagtcctaacccctagtacctcagaatgt
gaccttatttggaaatagggtcwttgcagatgtaattagttaagatgaggtcatactggagtagggtggg
ccctaaatccaatatgactggtgtccttataaraagaggaaatttggacacagacacgcacacggggaga
aggccatgtgaagacggaggcagagattggagtgatgcakctacaagccaaggaacgccaargrytgcca
gcaaaccaccagaagctaggaagaggcaaggaacagattctccctcacagccytcagaggarrccagccc
tgccgacaccttsatctcggacttctggcctccagaactgtgagagaatamatttctgttgtttaagcca
cscagtttgtggtactttgttacggcagcccyaggaaactaataca
>MLT1D   (MLT1d subfamily) - a consensus.
tgtggtaggcwgaataatggctccccaaagatgtccacgtcctaatccccagaacctgtgaatatgttac
cttacatggcaaaagggactttgcagatgtgattaagttaaggatcttgagatggggagattatcctgga
ttatccgggtgggcccaatgtaatcacaagggtccttawaagagggaggcagagggtcagagtcagaaga
aggagatgtgacgatggaagcagrragngaaaactcaacgttgctggctttgaagatggaggaaggggcc
atgagccaaggaatgcgggcagcctctagaagctggaaaaggcaaggaaacggattctcccctagagcct
ccagaargaacgcggccctgccgacaccttgattttagcccagtgagacycattttggacttctgacctc
cagaactgtaagataataaatttgtgttgttttaagccactaagtttgtggtaatttgttacagcagcma
yaggaaactaataca
>MLT1E   (MLT1e subfamily) - a consensus.
tgtggtaggcagaattctaaratgmtcccaatgatcctcgcctcctggcgtaatctccttgagtgtgagt
aggacctgtgacttgcttctagccaacggaatatggcaaaggtgatgaratrtcacgtgattacgcgtac
gtgattatgtaasattcagtctttgmcgtcattcttgccgagagactctcctsctggtyttgaagaagta
agctgccacgtcatgagnnnncnnannagarygccgcaaggcaagggnntctagagctgagagtcgccct
tactgatgggcagcaagaagcaagccacctcagtcctacagccgcaaagaactgaattctgccaacaacc
tagtgagcttggaagcagatcctgcccagtcgagcctccagatgagancgcagccctggctgacgccttg
actgcagccttgntagaccttgagcagaggacccagctaagccgtgcccagactcctgacccacagaaac
tgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgttacgcagcaatagaaaa
ctaacaca
>MLT1F   (MLT1f subfamily) - a consensus.
tgtggtagccagcctccaagatggcccccaatgatccctgctcctggtattcacayccttgtatggtcyc
ytcctacattgaryyagggctrgtctgtgtgaccaatagaatagggcagaagtgatggcgtgtsacttcc
aagaytargtcayaaawaacactgtggyttctgcyttgntctcttcgggctactcactctgggggaagcc
agctgccatgctatgaagacactcaagcagcctatggagaagtccacgtggsaaggaactgaggtctcct
gccaacagccagcttcgacytgccagccatgtgagtgagccatcttggaagcggatcctccagccccagt
yaagccttcagatgactgcagccccggctgacatcttgactgcaacctcatgagagaccctgagccagaa
ctacccagctaagctgctcctarattcctgacccacagaaactgtgagataataaatgtttrttgtttta
agccactaagttttggggtaatttgttacgcagcaatagataactaataca
>THE1BR   THE-1B Mammalian LTR retrotransposon internal sequence - a consensus.
gtaaattggtaccagtagagtggggcgctgctgaaaagatacccgaaaatgtggaagcgactttggaact
gggtaacaggcagaggttggaacagtttggagggctcagaagaagacaggaaaatgtgggaaagtttgga
acttcctagagacttgttgaatggctttgaccaaaatgctgatagtgatatggacaataaagtccaggct
gaggtggtctcagatggagatgaggaacttgttgggaactggagcaaaggtgactcttgttatgttttag
caaagagactggcggcattttgcccctgccctagagatttgtggaactttgaacttgagagagatgattt
agggtatctggcggaagaaatttctaagcagcaaagcgttcaagaggtgacttgggtgctgttaaaggca
ttcagttttaaaagggaagcagagcataaaagttcggaaaatttgcagcctgacaatgcgatagaaaaga
aaatcccattttctgaggagaaattcaagccggctgcagaaatttgcataagtaacgaggagccgaatgt
taatccccaagacaatggggaaaatgtctccagggcatgtcagagatcttcgcggcagcccctcccatca
caggcccggaggcctaggaggaaaaaatggtttcgtgggccaggcccagggtccccgtgctgtgtgcagc
ctagggacttggtgccctgcgtcccagccgctccagccatggctaaaaggggccaacgtacagctcgggc
cgtggcttcagagggtgcaagccccaagccttggcagcttccacgtggtgttgagcctgcgggtgcacag
aagtcaagaattgaggtttgggaacctccgcctagatttcagaggatgtatggaaacgcctggatgtcca
ggcagaagtttgctgcaggggcggggccctcatggagaacctctgctagggcagtgcggaagggaaatgt
ggggtcggagcccccacacagagtccctactggggcactgcctagtggagctgtgagaagagggccaccg
tcctccagaccccagaatggtagatccaccgacagcttgcaccgtgcgcctggaaaagccgcagacactc
aacgccagcccgtgaaagcagccaggagggaggctgtaccctgcaaagccacaggggcggagctgcccaa
gaccatgggaacccacctcttgcatcagcgtgacctggatgtgagacatggagtcaaaggagatcatttt
ggagctttaagatttgactgccccgctggatttcggacttgcatggggcctgtagcccctttgttttggc
caatttctcccatttggaatggctgtatttacccaatgcctgtacccccattgtatctaggaagtaacta
acttgcttttgattttacaggctcataggcggaagggacttgccttgtctcagatgagactttggactgt
ggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggttttga
aatgtgaggacatgagatttgggaggggccaggggcggaa
>MSTAR   MSTa- LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>MLT1R   MLT1- LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MLT2A1   Interspersed repeat MLT2A1 - a consensus.
tgtgatggttaatactgagtgtcaacttgattggattgaaggatacaaagtattgatcctgggtgtgtct
gtgagggtgttgccaaaggaggttaacattggactcagtgggctggggagaggcagacccacccttaatc
tgrgtgggcgcmatcyaatcagctgccagcgtggctagaatataaagcaggcagaaaaatgtgaaaagag
agactggcctagcctcccagcctacatctttctcccgtgctggatgcttcctgcccttgaacatcagact
ccaagttcttcagttttgggactcggactggctctccttgctcctcagcttgcagacggcctattgtggg
accttgtgatcgtgtgagttaatacttaataaactcccctttatatatatctattcyattagttctgtcc
ctctagagaaccctgactaataca
>MLT2B2   Interspersed repeat MLT2B2 - a consensus.
tgtgatggttaattttatgtgtcaacttgactgggctaargggtgcccagatagctggttaaacattatt
tctgggtgtgtctgtgagggtgtttccagatgagattagcatttgaatcagcggactgagtaaagaagat
tgccctcaccaatgtgggcgggcatcatccaatccgttgagggcctgratagaacaaaaaggcagaggaa
gggtgaatttgctctctctccttgagctgggacatccatcttctcctgcccttggacattagaactccag
gttctcgggccttcggactycgggacttgcaccagcagccccccagattctcaggccttcggactcggac
tgaryyacgccaccggcttccctggttctccagcttgcagacggcatatcgtgggacttctcagcctcca
taatcacgtgagccaattcccctaataaatcycytctatccatcctattggttctgtctctctggagaac
cctgactaataca
>MLT2C2   Interspersed repeat MLT2C2 - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacaycagtct
agatgttgctgtgaaggtattttrtagatgtgattaacatttayagtcagttgactttaagtaaaggaga
ttaccctccataatgtgggtgggcctcatccaatcagttgaaggccttaagagcaaagactgaggtttcc
cgaggaagaagaaattctgcctcaagactgcaacgtggaaatcctgctgntttwccagcctccaagcctt
cggactcgaactgcaacatcarctcttscctgggtctccagcctgccggcctaccctgcagatttcggac
ttgccagcctccacaatcgcgtgagccaattccttaaaataaatctctctctacacacaccctattggtt
ctgtttctctggagaaccctgactaataca
>MLT2D   Interspersed repeat MLT2D - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacattagtct
gggtgtttctgtgaaggttattttttggatgagattaacatttaaatcggtagactgagtaaagcagatt
accctccctaatgtgggtggacctcatctaatcagttgaaggcctgaatggaaaaaaagggctgaccctc
ccccaagtaagaggaaattctgcctgcctgatngtcttcgaactggaatatcagctctgcggattttgga
cttgccagcctccataattgcatgagccaattccttataataaatctatctactctctctacacacaccc
tattggttctgtttctctggagaaccctgactaataca
>LTR2   LTR from human endogenous retrovirus (4-14), 3' long terminal repeat.
taaggaaggagaccacctctcccattgtctcctgtttcatgagaaagcaaaaagttaaaaaaagaagcag
aagtgagatcaatggccagatggtttagtgccaagaaccaggcctggtagttaaacatcaactcctgacc
taaccgcttgtgctatccatagattccagatattgtatgaggaagacttgtgaaactttctgttctgttc
tgctagcccccatcactgatgcatgtagctctcagtcatgtagcccccacttgcacaatgtatcatgacc
ctttcacgtggacccctcagagttgtaagctcttaaaagggacaggaatctttactttggggagctcgga
tcttgagacgcgagtctaccaatgctcccagctgattaaagcctcttccttcatagaaccggtgtctaag
aggttttgtctgtgactgttcctgctaca
>LTR3   LTR from human DNA related to mouse mammary tumor virus (MMTV) 3' LTR.
gttggaggccgaaagaatagggtcgtgaccaactcagtataccactggaggctatatgagcaaacagcaa
actgttctcatgaatgcaggatgctggcaagctgacaactgcatctgccaccagaaggaatgctgagggc
agtcataccccacgtgcagtgttccttgtggttatctataggaatatctggaggctgttgtataaagaaa
gcaattatgtgagcccgtgataaatcaagcagctgaccaaccattacctcttcctccctgttgattctac
ctaataaatacaaagggctgtagaagctcagggcccttgttccctagaagaaaggagccgcctgtctcct
tctttaaaacagatctttttgtctttgtcttcatttctgcatttgttctcttttgttcagtcccaaaccg
acagccata
>LTR4   LTR from human endogenous retrovirus ERV3, POL-ENV-3'LTR region.
gaagcaggaaatataaaaggaaaaacaagtaaagggaaaacaagtcctttcctgaccagtctgactcact
ccaaagtcctgctggagctatgataattatctgcaaggccaggcaggggctccgaaggagggctccagga
gcagggatgagaaaaacaagttctccttatcagtttccctgtttgaaattctctccccataacattattc
tttgttctgctctcacaactatttttgtaactatttctgcaagtctgtaaagattttgtaagttcttgtt
tttctttctgtagcatggcaaggtcacaagacatgtttaagtaaggtaggctcatgttgcaaatcctgtt
gtaaaacctgtcacggtatgattaactgcctttgttctgcttctgtaagactgctttctcacctcgcagg
ttttgcgccaaaaacccgacttgcccctgcctgatgcatgtataaaagtcaagcccgtctttgttccggg
ctcagcctttggatgttaatccgctgggccagtggccacctaaataaaaccttcctgttgcacccagtga
tctctccggcctcctgatacccacaaca
>LTR5   LTR from human endogenous retrovirus 5' LTR, clone HERV-K18.
tgtggggaaaagcaacagaggtcagattgttactgtgtctgtatagaaagaagtagacataggagactcc
attttgttctgtactaagaaaaattattctgccttgagatgctgttaatctatgaccttacccccaaccc
cgtgctctctgaaacatgtgctgtgtcaaactcagggttaaatggattaagggcggtgcaagatgtgctt
tgttaaacagatgcttgaaggcagcatgctcattaagagtcatcaccactccctaatctcaagtacccag
ggacacaaaaactgcggaaggctgcaggggcctctgcctaggaaagccaggtattgtccaaggtttctcc
ccatgtgagagtctgaaatatggcctcgtgggaagggaaagacctgaccgtcccccagcccgacacccat
aaagggtctgtgctgaggaggattagtataagaggaaagcatgcctcttgcagttgagacaagaggaagg
catctgtttcccacccatccttgggcaatggaatgtctcggtataaaacccgattgtacgttccacctac
tgagatagggagaaaccaccttagggctggaggtgggacatgcaggcagcaatactgctttgtaaagcat
tgagatgtttatgtgtatgcatatctaaaagcacagcatttaatcctttaccttgtctatgatgcaaaga
cctttgttcacgtgtttgtctgctcaccctctccccactattgtcttgtgaccctgacacatctccctct
cagagaaacacccacgaatgatcaataaatactaaggggactcagaggctggtgggatcctccatatgct
gaacgttggttccccgggcccccttatttctttctctatactttgtctctgtgtctttttcttttccaag
tctctcattgcaccttacgagaaacacccacaggtgtggaggggcaacccaccccttca
>LTR7   LTR from human endogenous retrovirus RTVL-H2.
tgtcaggcctctgagcccaagctaagccatcacatcccctgtgactagcacatatacgctcagatggcct
gaagtaactgaagaatcacaaagaagtgaaaatgccctgccccaccttaactgatgacattccaccacaa
aagaagtgaaaatggccggtccttgccttaagtgatgacattaccttgtaagagtccttttcctggctca
tcctagctcaaaaatctcccctactgagcaccctgcgacccccactcctacccgccaaagaacaaccccc
ctttgactgtaattgtcctttacctacccaaatcctataaaacagccccacccctatctccctttgctga
ctctcttttcggactcagcccgcctgcacccaggtgattaaaagctttattgctcacacaaagcctgttt
ggtggtctcttcacacggacgcgcatgaaa
>LTR11   LTR from human HTLV-I related endogenous retroviral sequence (HRES-1/1).
tgtgtttctgcaggatgtacagccctcccagcacggtgctcgcttccctaatgccattccacagtatttg
ttgcagagaaggaaggcagcatgccaggacagatggagacaggactaatttggcctgaggtatgtaattt
tgaacttgagcctctctctgggactgtaaaactccaaatcaaagctaatctgagaatacatacatctgaa
agatgattaggactgtaaacatctattaatattcaactctgatacaaagtacaagttgtttattcttacc
acgcaaggccaaaaaaggggagaaaaaaaaaaaagcacacagcatatgcactggaaagtttcgcttattc
aaaacagtatttgtcaagcacctccagtctggtgctgcaggggaaacaaagattaaacagccaggcggac
actgctctgcttccaaggtgcttacggtcttaagaaggagacaagacatgtttataaatagccaaaatgc
aacccagaaaaggctaaaaaacactgagagggagggagaaataaacgaagcaagaggtctccggaggaag
agatgaatgaattagcctattaataactccgtcactgtaatcccaatgtaaagcaagaattccaaaccag
gaaaggtcaaactgaagtatttgaggaacacaggcgtcgcctaagcccttcaca
>LTR12   LTR from human ERV9 endogenous retroviral sequence (HRES-1/1).
tgtatctagttaatctggtggggagttggagaatctttatgtctagctaagggattgtaaatacaccaat
cagcactctgtatctagctcaaggtttgtaaacacaccaatcagaaccctgtgtctagctcagggtttgt
gaatgcaccaatcagcactctgtatctagttaatctggtggggacttggagaatctttatgtctagctaa
gggattgtgaatgcaccaatcggcactctgtatctagctcaaggttgtaaatggaccaatcagcactcta
tgtctagctcagtgtttgtaaatacaccaatcgacactctatctagctaatctagtggggacgtggagaa
cttttgtgtctaactcagggatgtaaatgcaccaatcagaaccctgtcaaaatggaccaatagctctctg
taaaacagactgactttctgtaaaatggaccaatcagcaggatgtgggtggggccagataagagaagaaa
agcaggctgcctgagccagcagtggcaacccgcttgggtccccttccacactgtggaagctttgttcttt
cgctctttgcaataaatcttgctgctgctcactctttgggtccacactgcctttatgagctgtaacactc
accgcgaaggtctgcagcttcatctgaagcagcgagacacgaacccaccaggaggaacaaacaactccga
tgcgctgccttaagagctgtaacaccgcgaggtctcgagcttcactcctgagccagcaagaccacaaacc
caccagaaggaagaaactcaggaaaacagccgaacatcagaaggaataaactctggacacaccaccttta
agaactgtgacactcgctgcgagcgtctgtggcttca
>LTR13   LTR from a  putative human endogenous retrovirus.
tgtgggccgcaagccagggagctgcccaggcaagagcctgaaggcacaagctgttccagtacagcaaaga
aaataattagaataagaaaagttttactagagataggaaacggataggattatatctgactattattaat
cattagtttgtagcatcactctttgttctattaccataatgatctctgttctattatgattaccttgggg
gaaaccaggccacacagagttaggagctgaagggccacagtgagaggtgaccagaagacgagagtgtgag
ccctcattcacgcccagagaagggccgctggagggctccttggcctagcggtaatgccagtgcctgggaa
ggccctggttacttagcaggccttggtctagcggtggccccagtgcctgggaaggcacccgttacttagc
agacccggaaaggaatctccctctctccaggggagacagagaacgctccgctccaccacctcttgtggga
ggtctgacattagccaggccgggccgagtcatccggaggctccaacgtctgtctccctgtgatgctgtgc
ttcagtggtcacgctccttgttcactttcatgttcagcctgtgcacctggctcctccttttaagttctta
gaagacagcagtagcagaactagtaggagtaccacagtcttcgatctttctgataagtgcatagaagaaa
cgctgacgtttgctgtcctccctctccacctcggctaccacaaagggaaaggccccctgtccagtggaca
cgtgactcgcgtgacctatcgatcattggagatgactggcactccttaccctgcccccttgccttgacta
caataaatagcagcgcctccaggcactcggggccactacctgtctgtctccgcgctttggtggcagtggt
cccccgggcccagctgtctttcttcctatctctttgtcttctgtctttatctcttcgatctctcgtctcc
gcacacacgcgaagagaaaacccacagacccggtaggggtggaccctaca
>MER1A   Nonautonomous DNA transposon.
caggggtccccaacccccgggccacggaccggtaccggtccgtggcctgttaggaaccgggctgcacagc
aggaggtgagcggcgggcgagtgagcgaagcttcatctgtakttacagccgctccccatcactcgcatta
ccgcctgagctccacctcctgtcagatcagcggtggcactagattctcataggagcgcgaaccctattgt
gaactgcgcatgcgagggatctaggttgcgcgctccttatgagaatctaatgcctgatgatctgtcgctg
tctcccatcacccccagatgggaccgtctagttgcaggaaaacaagctcagggctcccactgattctaca
ttatggtgagttgtrtaattatttcattatatattacaatgtaataataatagaaataaagtgcacaata
aatgtaatgcacttgaatcatcccgaaaccatcccccccccctggtccgtggaaaaattgtcttccacga
aaccggtccctggtgccaaaaaggttggggaccactg
>MER1B   Nonautonomous DNA transposon.
caggggtccccaacccccgggccgcggaccggtaccggtccgtggcctgttaggaacygggctgcacagc
aggaggtgagcggcgggcgagtgagcattaccgcctgagctccgcctcctgtcagatcagcggcggcatt
agattctcataggagcgcgaaccctattgtgaactgcgcatgcgagggatctaggttgcgcactccttat
gagaatctaatgcctgatgatctgaggtggaacagtttcatcccgaaaccatccccgccccccggtccgt
ggaaaaattgtcttccacgaaaccggtccctggtgccaaaaaggttggggaccactg
>MER2   Nonautonomous DNA transposon.
cagtcggccctccgtatccgtgggttccacatccgtggattcaaccaaccgcggatcgaaaatattcaga
aaaaaaattgnatggttgcgtctgtactgaacatgtacagacttttttccttgtcattattccctaaaca
atacagtataacaactatttacatagcatttacattgtattaggtattataagtaatctagagatgattt
aaagtatacgggaggatgtgcgtaggttatatgcaaatactacgccattttatatcagggacttgagcat
ccgcggattttggtatccgcggggggtcctggaaccaatcccccacggataccgagggacgactg
>MER3   Nonautonomous DNA transposon.
cagcgctgtccaatagaactttctgtggtgatggaaatgttctatatctgcgctgtccaatacggtagcc
actagccacatgtggctaytgagcacttgaaatgtggytagtgcgactgaggaactgaatttttaatttt
atttaattttaattaatttaaatttaaatagccacatgtggctagtggctaccatattggacagcgcag
>MER4A   internal sequence belongs to the MER4I group; subfamily MER4A.
tgtgaaaggaaaataaatctcgggrccccmaaatcactaagccaaagggaaaagtcaagctgggaactgc
gtyaggcaaacctgcctcccattttattcctaaataagatagctacaaagataaaaggctacatacctct
ctcacaatttycyacaaggaaattccttgcggacctcaagatctttaccctaaaacagttctgytgamyt
tcaccttggcawtgyaaatggrtacaggacaaaggtacagaactgaaagtcatccctctgctcacctgag
acaaatgcatatctgattgcttcctctgccctattgtttatgtaaaaatgcagattcactgagccagact
maattgtgtattcagtgaaargctgatcarrgactcaaaagaatgmagccwtttgtctcttatctaccta
tgacctggaagcccctrcttcgagttgtcccgcctttccagaccgaaccaatgtacatcttacatatatt
gattgatgtctcatgtctccctaaaatgtataaaascaagctgtrccccgaccaccttgggcacatgtcg
tcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaaataaactttctaaattgaytg
agacctgtctcagatacttttgggttcaca
>MER4B   internal sequence belongs to the MER4I group; subfamily MER4B.
tgtaaaccaaaaataaaattctaagkcccccaaccgtctgaatggacycctcctctyggccaagggcayt
ccaaagytaacctgraaaactagttcaggccatgatgggaagtgggggtcggacacgcctcattataccy
tccyycttctggaattcaggcacaactgaccagcattaacatcaacacagacnttaagtctgataagaaa
cagtttacaayctrttctctctgaagcctgctanctgaargcttcatctgcacgataaaacttggtctcc
gcaaccccttatntcataacccggacattcctttccattgatctyaantcttcaaccarttgccaatcag
aaaatctttgaatctacctatgacctggaagcccccgcttcgagttgtcccgcctttccggaccgaacca
atgtacatcttacatgtatttgattgatgcctcatgtctccctaaaatgtataaaascaagctgtrcccc
gaccaccttgggcacatgtkgtcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaa
ataaactttctaaattgaytgagacctgtctcagatacttttgggttcaca
>MER4C   internal sequence belongs to the MER4I group; subfamily MER4C.
tgtgaaaggaaaataaaaacttgggaccccaattcactatgccaaaaggaaaaaattaagctgaaagctg
agtcatgcaagaaactgcctttccttttgttcctaagcagatagctacagataaaaggttaaatatctcc
acaggtagctactctatgttcaccttatcttatgtaaagtgccgatttactgagcacgagacgaatacat
aattgactattcccctacctgctccttttctcttgcaacatgtggattcagtaatgtgaccataccctcc
ctctttcccctccagcccgcttttcccctttaaatattgaagccctcaaaatcatctttggagaaaggca
cagaccacagatgtttctgtgatttcgtgtttctttctcccgggcatgtccttaaccttggcaaaataaa
cttctaaattgattgagacctgtctcagatactttttggtttaca
>MER5A   a consensus.
cagtggttctcaaagtgtggtccccggaccagcagcatcagcatcacctgggaacttgttagaaatgcag
attctcgggccccaccccagacctactgaatcagaaactctgggrgtggggcccagcaatctgtgtttta
acaagcyctccaggtgattctgatgcatgctcaagtttgagaaccactg
>MER5B   a consensus.
cagtggttctcaaccytggctgcayattagaatcacctggggagyttttaaaaatccngatgcccgggcc
acaccccagaccaattaaatcagaatctctggrggtgggacccaggcatcagtattttttaaarctcyyc
aggtgattccaatgtgcagccaaggttgagaaccactg
>MER6   Nonautonomous DNA transposon.
cagcaggtcctcgaataacgccgtttcattcaacgtcgtttcgttataacgytgatgagraaaaaaatcg
attcccggccggggccactgtctgtgtggagtttgcacgttctccccatgtctgcgtgggttttctccag
gtactccggtttcctyccacatcccaaagatgtgcacgttaggttcaytggcgtgtctacatggtcccag
tctgagtgagtgtgnntgtgtgtgtgagtgtgccctgcgatgggatggcgtcctgtccagggntggytcc
cgccttgcgccctgagctgccgggataggctctggccacccgtgaccctgaamtggaataagtgnrttgr
aaaatgaatraatgaatgartacgaattattataaaataaaaatttgtaaagtctatgntaatcttacac
atacatgacaatacatgaaatggtaagaaagtgatcagtgagcctgccatatatgttattgcttgtttct
gaactgagtggtgggaggaggtgttcctaacaatgttcactttgcagacatttatttctttatttaatcc
attatcactatgaccactgtcattcagtkattcwccaaaaattgggtaaataattatcwtryttgttttt
attaatctttcttaaatgtatgtatagctcacatttatttcagtgtttaatattagaagtgttttgggtc
tttatttagaagtttggtgatgtttttgtgaccagaaatatgccataggaacttaactcttgtttatatc
aattagcctrtggtaaaattggtttcgttatacgtcgtttcacttaaagtcgcagtttccaagaacctat
caacgacgttaagtgaggacttactg
>MER8   Nonautonomous DNA transposon.
cagttgtccctctgtatanncgggggattggttccaggacccytgtgtatacmaaaatccgcgcatactc
aagtcccgaagtcggccctgcggaacccacgnatatgaaaagtcggccctccatatatacgggtttcgca
tcccgcgaatactgtattttcaatccgcgtttgattgaaaaaaatccgcgtataagtggacccacgcagt
tcaaacccgtgttgttcaagggtcaactg
>MER9   internal sequence HERVK9I belongs to the HERVK-group.
tgttgggaacaggcccccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgc
agcactgtgacatgttcatgatggccntaacgcccacgctggaaggttgtgggtttactggaatgaggac
aaggaacacctggcccacccaggtcggaaaaccgcttaaaggcgttcttaaaccatgaacaatagcatga
gcaatctgtgccttaagggcatgttcctgctgcagataactagccagacccaccccttcatttcggccca
tcccttcttttcccataagggatacttttagttaatcgagtatctatagaaacaatgctaatgactggct
tgctgttaataaatacatgggtaatctctgtttggggctctcagctctgaaggctgtgaggccctgattt
cccactttacacctctatatttctgtgtgtgtgtctttaattcctctagtgccactgggttaggctgtcc
ccagtcgagctggtctcgca
>MER11A   LTR from HERVK-related endogenous retrovirus HERVK11.
tgttgcgggaagtcagggaccccgaatggagggaccggctggagccryggcagaggaacataaattgtga
agatttcattttaatatggacatttatcagttcccaattaatacttttataatttcttatgcctgtcttt
actgcaatctctgaacataaattgtgaagatttcattttaatatggacatttatcagttcccaaataata
cttttataatttcttatgcctgtctttactttaatctcttaatcctgttatcttcgtaagctgaggatgt
acgtcacctcaggaccactgtgataattgtgttaactgtacaaattgattgtaaaacatgtgtgtttgaa
caatatgaaatcagtgcaccttgaaaaagaacagaataacagcgattttagggaacaagggaagacaacc
ataaggtctgactgcctgcagggtcgggcaaaatagagccatatttttcttcttgcagagagcctataaa
tggacgtgcaagtaggraagatatcgctaaattcttttcctagcaaggaatattaataattaataccctg
ggaaaggaatgcattcctggggggaggtctataaacggccgctctgggaatgtctgtcttatgcagttga
gataaggactgaaatacgccctggtctcctgcagtaccctcaggcttactagggtggggaaaaaaccccg
ccctggtaaatttgtggtcagactggttctctgctctcgaaccctgttttctgttgtttaagatgtttat
caagacaataygtgcaccgctgaacatagacccttatcagtagttctgattttgcccttgtcctgtttcc
tcagaagcatgtgatctttgttctcctttttgccctttgaagcatgtgatcttgtgacctactccctgtt
cttacaccccctccccttttgaaatccttaataaaaacttgctggttttgaggctcaggtgggcatcacg
gtcctaccgatatgtgatgtcaccccyggaggcccagctgtaaaattcctctctttgtactctttctctt
tatttctcagccrgccgacacttatggaaaatagaaagaacctacgttgaaatattgggggcaggttccc
ccgata
>MER11B   LTR from HERVK-related endogenous retrovirus HERVK11.
tgttgcgggaagtcagggaccccaaacggagggaccggctgaagccatggcagaagaacatggattgtga
agatttcatggacatttattagttccccaaattaatacttttataatttcttatgcctgtctttactgca
atctctaaacataaattgtgaagatttcatggacacttatcacttccccaatcaatacccttgtgatttc
ctatgcctgtctttactttaatctcttaatcctgtcatcttcrtaagcttcatgagctgaggatgtatgt
cgcctcaggaccctgtgatrattgcgttaactgcacaaattgtttgtacagcatgtgtgtttgaacaata
tgaaatctgggcaccttgaaaaaagaacaggataacagcaattgttcagggaacaagagagataacctta
aactctgactgccggtgagccrggcrgaacagagccatatttctcttctttcaaaagcaaatgggagaaa
tatcgctgaattctttttctcagcaaggaacatccctgagaaagagaatgcgyacctaggggtaggyctc
tgaaatggcccccctgggagtggcctgtcttttatggtngaaactgcagggatgaaataarccccagtct
cccatagcgctcccaggcttattaggawgaggaaattcccgcctaataaattttggtcagaccggttgtc
tgctctcaaaaccctgtctcctgataagatgttatcaatgacaatgcgtgcccgaaacttcattagcaat
tttaatttcgccccggtcctgtggtcctgtgatctcgccctgcctccayttgccttgtgatattctatta
ccttgtgaagtacgtgatctctgtgacccacaccctattcgtacactccctccccttttgaaaatcccta
ataaaaacttgctggtttttgcggcttgtggggcatcacggaacctaccgacatgtgatgtctcccccgg
atrcccagctttaaaatttctctcttttgtactctgtccctttatttctcaagccagccgacrcttaggg
aaaatagaaaagaacctacgtgattatcggggcaggttccccgata
>MER20   Nonautonomous DNA transposon.
cagtggttctcaaccgggggtgattttgccccccaggggacatttggcaatgtctggagacatttttggt
tgtcacaactggggggggggratgctactggcatctagtgggtagaggccagggatgctgctaaacatcc
tacaatgcacaggacagcccccacaacaaagaattatccggcccaaaatgtcgatagtgccaaggttgag
aaaccctg
>MER21   a consensus.
gccctyctrttkcagraaaacctctctcaaaccatgttttycctctgctstcataccacgacaacagtcg
tcaacacagaagacttctgtgaccaaatgtgtggaggattttccccacacaccaagcagcagacaccagc
tgggcgtcctccaaytcagttccgacactgtctacctggagatagcgtcagatcccacaggttgaggtct
cagtccccaagactgnccccaccttcagayacagttgcaagyccgggyctctggaacttctgaccaactg
gcttcaarttggggttcccacgacacctctttaggttcgaytaatttgctagagtggytcacaaaactca
rrgaaacacttattawgtttactggtttattaatagatgatatttcaaaggatacagatgaagagataca
tacggggcggtctggaagrkcccagcgcaggagcttccgtcytgatagrrttggggttacaccctccaga
ttcttcaccttctgtyagcctccacgtgttcagctctccagaagctcyctgaaccctgtcctttgggcct
tttatggagayctcattggntgtccatgactgaagcatggacgaytgnnawaatgtgattggrcaaaaag
ggtctgatctaatcccagcaaggyctgtccagattcttcttggtctctttgtgcagcattccttcctcca
gggtatggggcaggaccycctctggaatgagggtcttacgacccacaatcagattatagagtcctgcctt
gggcggmtgaaargaggrcargagaaggycagagaratattctgtttcctgaggcctaaagcacctctac
attatagcgaaagactgtaaccatggtcatgtgagttatggacaagaaccatggacaaaaacacatatac
aatcatatcccacctcccaacgc
>MER21B   a consensus.
tcaacacacaacacttctgtcaccaaacgtgtggrrrtttttccccacacacaaacaaktcttcagttct
gcggcggacaccarctgggtgtcctccaattcarttcagttctgacactawctacctrgagatagcgtca
gatcccacaggtttaagggctcagtcccacaagactgcccccacttcagatrccagtcgcaagtctrggt
tktcacccgtacttctgaccaactggctataaattgttcccacgacccctctttaggttcgattaatttg
ctagaatrgctcacaraactcagggaaacacttatatttaycggtttattataaaggatattacaaagga
tacagatgaacaaccagatgaagagatrcatagggcgaggtmtgggagagtccngggnncaggagcttcc
gtgccctctctggstnnrccaccttccwggcacctccacgtgttcaccaacccggaagctctccgaaccc
tgtccttttgggtttttatggaggcttcattacgtaggcatgaytgattacatcantggccattgattat
caactcaacctycagcycctctccyctccccagaggttggagggtggggctgaaagttccaaccytctaa
tctgccttggtctttctrgcgaccagcycccatccwgragcntnctaggggctgcccrccakgagtcgmc
tcattagmacaaaagrncrtynctattacccaggarattccaagggttttaggagytctgtgtcaggaac
cggggtcaaagaccaaatattagat
>MER22   Human SSTI moderately repetitive DNA sequence family.
gagctctgggcttccatacctgtgtgggacagggaagctctctcggtctccatggcccaagtgatggctg
cacgctcggtccaggaagaggcggaggaagcccaccgctcctgacattggccttctaggaaaggcggtgt
tgcatcccacctgcacttcctctctgattcttgagggccaaccgcttcctccgctcctggggaaagtgcc
ttctagcaccgaatcttttggctgccacggatgtcagggagccaacgggactgggttttggctgggtgca
ggggaggttgcgtcaggggtactagccggcggcgggctgggggtggggtgtactttgtccaaactcccgg
ctcctctggcgggcctccctgaacgtggcgtggactcgcgcacaggccctgtctcgcaggttttcaggtg
cgcttggcttttcctccgctttgtggggcaggtctccagtgcccccggcgcacgcctggacatcactgtc
cgtctcgtcgtcgcccctacggcctcaaagacacacgctgcctgcatgtgctcttgggggacgacagtgc
acatgtggacacactggctccagctcggactcgcctctgtctctctttgcccgtgtcgccggaagccgcc
tcgggttgccggagccctcgggccttggagatgaaggcaggcccctgctcctgccaggaaggagggaggc
agtgggctcatgggtcggtgcctttgcagccgacagcacgtgcggccctggggatcttcctgtgccccgg
cgagaccctttccgcctcactgcattggaaccccattcccgatcacccgctgggatccatcatcggactc
caagaggagtccgcgcagccagccggcaccccgaagctcctccttcagcgggaaccgaagcagaagagcg
atcaaggaggtcctcaccacaggactcctatgggtccgaccctgggtctcccgcaggcccctctggcagt
cctcttcccacccgccgcctcggcttcgccgccgccgccgcaacctccagcaccgccccccaggccccgc
agccgccgtcgccgccattttttaaagggtcgcagcctgactctgcggagtaagggggggtggagcgggg
gagtcgctcgccagcatgcgcgagcccgagccgccgcttgggtcacagtgaaagccaccgttgcccgggg
atgggtccctgacacttggggaagtaggagccctgtgtgatcgtgcgtctgagtctgggctgagaccagt
cctggccagggcagttaccaggacggtctcggaggccgggattcgcggagggtccagcagcaggaagaaa
ccccaggaggaagaaacctcagacagatcgccggcgaggcagcgcgggatcccagcctcaggcgtgcgcg
gacggtgtgcgggtgagtctccccaaaagtggagcccttgtgatgacgagcacaggtccgcctgcgtgcc
cgtgggcggctctctcaccggtggctctcagtcgcggagagcagaacccgcagcttcaggggctgctgcg
ggagggtgttccctgctgtacgt
>MER28   Nonautonomous DNA transposon.
cagttgacccttgaacaacatgggtttgaactgcgtggrtccacttatacgcggattttcttccatctct
gccaccctgagacagcaagaccaacccctcctcctcctcagcctactcaacntgaagacgangaggatga
agacctttatgatgatccacttccacttaatgaatagtaaatatattttctcttccttatgattttctta
ataacattttcttttctctagcttactttattgtaagaatacggtatataatacatataacatacaaaat
atgtgttaatcgactgtttatgttatcggtaaggcttccagtcaacagtaggctattagtagttaagttt
tkggggagtcaaaagttatacgtggatttttnactgcgcggggggtcagcgcccctaacccccgcgttgt
tcaagggtcaactg
>MER30   Nonautonomous DNA transposon.
caggggtgtccaatcttttggcttccctgggccacactggaagaagaagaattgtcttgggccacacata
aaatacactaacactaacgatagctgatgagctwaaaaaaaaaaaamaatcccamaaaaatctcataatg
ttttaagaaagtttacgaatttgtgttgggccgcattcaaagccatcctgggccgcgtgcggcccgcggg
ccgcgggttggacaagcttg
>MER33   Nonautonomous DNA transposon.
ctgcgctgtccaatacggtagccactagccacatgtggctattgagcacttgaaatgtggctagtccaaa
ttgagatrtgctgtaagtrtaaaatatacaccagatttcaaagacttagtacgaaaaaaagaatgtaaaa
tatctcattaataatttttatattgattacatgttraaatgataatattttggatatattrggttaaata
aaatatattattaaaattaatttcacctgtttctttttacttttattaatgtggctactagaaaatttaa
aattacatatgtggctcgcattrtatttctattggacaacgctg
>MER35   a consensus.
gatgtggcgtttgagtggacacgggggaagaaacaagtaatatgaataacatggtgagacagaaagagtt
gtggacagagctgtgggaaatatgagagataaggagagagatactgaaaagagcgttaagagagatgaag
atagggtgtctggcccatgaaggccctcgtgaagagcaatgctgaatagatgaatgaacctcaatgccca
gcagtggtgggatgaaaaggggatcctgtgcagaaaccacactacccatcagagaagcaactctgctcgt
ttccccttga
>MER39   a consensus.
cataattccgggttctcagctcctataagccttgctgtttcctgagtgactaaaacnataagnatatctt
ttgttgaantatntggctttttgtccttggttcatgtagcagctttggaacagcttcagagcggtaaagg
tganggacagncttttgttanaatgttggggcgctctaagcctcagaagcagncctcagraaacagaann
tcattttctgaccttctctngccctctaatcwtymcccgcctttctgtcttrgrgctgsccgtaaagaaa
ttwtctgacctatctcgtctgatwgtaggtcataagaccctcattccagaaggggtcccgccctataccc
gggaggaaggaatgccgcacagakagaccaagaagaatacgaacagacaagccttgctgggttyccacac
ycagtytatkaccattagatcatwccccttttgtcyaatcacatttctgcgcagctntccattcttcatc
aaatctaarcataaaaatagagttttccctgagtmtttgkgtcttcatttctgaaggctcycatgtcaca
taaaactttgattaaataaatctrttatgcttttctcttgctaacctrtnttttattataggagtgtnng
ccgtgacccttatgatgggtagggaaggnatcacacctttctgcccctacagnnntaatgccc
>MER44A   Nonautonomous DNA transposon.
cagtagtccccccttatccgcgggggatacgttccaagacccccagtggatgcctgaaaccacagatagt
accgaaccctatatatactatgttttttcctatatatatatacctatgataaagtttaatttataaatta
ggcacagtaagagattaacaataactaataaaatagaacaattataacaatataccgtaataaaagttat
gtgaatgtggtctctttctctcaaaatatcttattgtactgtactcacctattttcggaccgcggttgac
catgggtaactgaaactrcggaaagtgaaaccgcggataaggrgggactactg
>MER44C   Nonautonomous DNA transposon.
cagtagtccccccttatccacgggggatacgttccaagacccccagtggatgcctgaaaccacggatagt
accgaaccctattgctatcagtcttttggaacatgtttctgttcatgtcttctgcccacaaatttaatgc
ctcttccacctcaactaaacacgtatcatgcactccggccatcacttttgcagtttgaggtatgacatca
aaactagcatgaatttatttttccttcttcacaattccaaagatggaagattctttcttaccgtagatct
tagcaacctcagcatacgattatttttcytttctttttaagtcaagaactttcaccttttcgcttaaagg
aagcactttacagcttctytttggcatgtccgaattgccaccaacactactcttgtgcttttgggccatt
attaagtaaaacgggagttacttgaacacaagcactgtgataccaagacagtcggtctgataactgagat
ggctactaagtgattaacaggcaggtagcgtanacggcgtggatacgctggacaaagggatgattcacat
cccggatgggacggcgcgaaatttcatcacgctactcagaacggcgcgyaatttaaaacttatgaattgt
ttatttctgnaattttcaatttaatattttcggaccgcagttgaccacgggtaactgaaaccacagaaag
traaaccacggataaggggggactgctg
>MER45   Nonautonomous DNA transposon.
caggaccggctacataatttgcgggrcccagtgcaaaatgaaaatgcggggccccttgttcaaaaattat
taagaatttcaagacggcgacagcagagcattaaaccaagcacggggcccttctragcgcggggccctgt
gtgactgcacaggtcgcacgcccatgaagccggccctg
>MER48   Long terminal repeat of HERVH-related endogenous retrovirus HERVH48I.
tgwaagattctccccrgggcctgaaagcttraggggatgartaacccctcccttcctcaggcccagtccc
aaggcgcaaggtcacttgtgccagcagtgtgcgccagcaagatagcagaagcaggaagagagccggccgg
aagacacgtacccccgaagatcgagaaagaggccatccgggtacaacgtagcagttacgtcagactggga
cacttcctgtttacaggagactataaaaccyytgccccgtcctcacttggggctgacgccattttaggcc
tcagcccgcctgcactcaggcagcacccaggcgctcattaaaacagcgtgttgctccacacctcctcgtg
ttgttgtggacgcgctctcggggttsgaaccgayacaagarccttaca
>MER53   a consensus.
gggttgccagatttagcaaataaaatacaggatgcccagttaaatttgaatttcagataaacaacaaata
attttttagtataagtatgtcccatgcaatatttgggacatacttataactaaaaaattattcattgttt
atctgaaattcaaatttaactgggcatcctgtattttatctggcaaccc
>LOR1   Human low copy repetitive sequence - a consensus.
tgaaaccgrcccaattgtcccatagaactgatgtttatrgtttttttgaataaacatagaaattgaccct
cctggtcttaaarcttgaaacttacatttgtyttatctgagttccttcctcaggaaaccaacyntcaggc
ctcycaaawagtatcaargaactgaaactcaccagatcacyrcatccagacaatgagayrccagacccct
catycatcatgattgcctaactgaccacctgctkcctgttgaccaactcctcttccttacccctccctaa
ttcctgttttcyyacacatagttacatttcttccctgctatataaaccccyaattttagtyngtcaggga
gatggatttgagactgatctcccatctcctcggctgcagcaccyrawtaaagccttcttccttggcaata
mtyrttgtctcagtgattggctttctgtgcagtgagcagcaggacctagacyraacccctggtrtttcag
taaca
>SVA   Composite retroposon.
ctccctctccctcaccctctccccatggtctccctctccctctctttccacggtctccctctgatgccga
gccgaagctggacggtactgctgccatctcggctcactgcaacctccctgcctgattctcctgcctcagc
ttgccgagtgcctgcgattgcaggcgcgcgccgccacgcctgactggttttcgtattttgttagtggaga
cggggtttcgctgtgttggccgggctggtctccagctcctaaccgcgagtgatccaccagcctcggcctc
ccgaggtgctgggattgcagacggagtctcgttcactcagtgctcaatgatgcccaggctggagtgcagt
ggcgtgatctcggctcgctacaacctccacctcccagcagcctgccttggcctcccaaagtgccgagatt
gcagcctctgcccggccgccaccccgtctgggaagtgaggagtgtctccgcctggccacccatcgtctgg
gatgtgaggagcgtctctgccctgccgcccatcgtctgagatgtggggagcacctctgcccggccgcccc
gtccgggatgtgaggagcgtcgctgcccggccgccccgtctgagaagtgaggagaccctctgcctggcaa
ccgctccatctgagaagtgaggagcccctccgcccggcagccgccctgtctgagaagtgaggagcccctc
cgcccagcagccacctggtccgggagggaggtgggggggtcagccccccgcccggccagccgccccgtcc
gggagggaggtgggggggtcagcccccagcccggccagccgccccgtccgggaagtgaggggcgcctctg
cccggccgcccctactgggaagtgaggagccactttgcccggccagccactctgtccgggagggaggtgg
gggggtcagccccccgcccggccagccgccccgtccgggagggaggtggggggatcagccccccgcccag
ccagccgccccgtccgggagggaggtgggggggtcagccccccgcccggccagccgccctgtccgggagg
tgaggggcgcctctgcccggccgcgcctactggaaagtgaggagcccctctgcccggccaccaccccgtc
tgggaggtgtgcccaacagctcattgagaaggggccatgatgacaatggcggttttgtggaatagaaagg
ggggaaaggtggggaaaagattgagaaatcggatggttgccgtgtctgtgtagaaagaggtagacctggg
agacttttcattttgttctgtactaagaaaaattcttctgccttgggatcctgttgatcggtgaccttac
ccccaaccctgtgctctctgaaacatgtgctgtatccactcagggttgaatggattaagagcggtgcaag
atgtgctttgttaaacagatgcttgaaggcagcatgctccttaagagtcatcaccactccctaatctcaa
gtacccagggacacaaacactgcggaaggccgcagggtcctctgcctaggaaaaccagagacctttgttc
acttgtttatctgctgaccttccctccactattgtcctgtgaccctgccaaatccccctctgtgagaaac
acccaagaatgatcaataaaaaaaaaaaaa
>ALR   Human alpha repetitive DNA - a consensus.
aattctcagtaacttccttgtgttgtgtgtattcaactcacagagttgaacgatcctttacacagagcag
acttgaaacactctttttgtggaatttgcaagtggagatttcagccgctttgaggtcaatggtagaatag
gaaatatcttcctatagaaactagacagaat
>MSR1   Human 37 BP minisatellite repeats, specific to chromosome 19.
agtcaagacccccagcccctcctccctcagacccaggagtcaagaacccccagcccctcctccctcagac
ccaggagtcaagaacccccagcccctcctccctcagacccaggagtcaagaccccccagcccctcctccc
tcagactcatgagtccagacccccagcccctcctccctcagacccaggagtccagacccccagcccctcc
tccctcagacccaggagtccagacccccagcccctcctccctcagacccaggagtccaggccccacccct
c
>TAR1   Telomere associated repeat sequence, complete sequence.
gatcaacagtgaggaggtcccacaaggctaagtggggcaagtcggggacctaaggcagtagcaggaaaac
caaagaaaacaggcggagacttgagacagaggcaggaatgtgaagaagtccaaaataaaaatccctgcac
aggactcttaggctgttatcatgcactatcagcctactcctccctatttttgtacaataagctctttaca
ctgtatttcttttcaatgaagttatcttccatctttgtactgcctcttggtgaaaagctgtcttccaagt
taataactgggacatcagctctctgcagtaatagctccttttcagttttaatttgcagaactgatgggga
ttaataactggcgctctgactttaagtggtgcaggaggcggccagtaggggacgccagccgttacgccgg
gagcaagagggccctgcgtagtccccatctgcctgcatgtggcgtgcagccacgacaatggcagcaagag
ggcccggcagtgtgcccagctgccagcaggcgggtgtgctgccactataatgtgaggaagagggccctgc
aatgtccctagctgccagcaggcggcgtgccaccactatactgcgagcaagagagccctgccgtgccccg
gcgccagcagggggcgctggacagcactgtaagcaagagggccctgcagttgtcctagtcgccagtaggg
gacgcaatggcagagcaccgtgggcaagctggtcctgtagtgcccggctgcaagcagggggcgcccgaaa
cgggcttttcagattactcaggttccactcgtctctgcgccgccggggacgtgtgtctctgcgcgtgcac
cgcgccacccccgcgctccccgcccggcggcgcgcgactgtgcgactgcaacactccccgccaccctcag
cccagcgacgtgcgtctctgcgcctgcgccgcgcctcactcccgcccgctcagcgacccctcccttccgg
ggaggcgccggcgtgcgtctacgccctgcgccgcgtctccccaacagcggcgcgcctctctgcgcctgcg
ccggcgcgccgcgcctctctgcgcctgcgccggcgcgccgcgcctctctgcgcctgcgccggcgccccgc
gcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgc
ctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgc
cccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctc
tgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgcc
ggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgc
ctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcct
gcgccggcgcgccgcctttgcgagggcggagttgcgttctctttagcacacacccggagagcatcgcgag
ggcggagctgcgttctcctctgcacagacttcgggggtattgcgaaggcggagcagagttcttctcaggt
cagacccgggcgggcgggctgagggcactgcgagggtggagctgcgttctgttcagcacagacgtggggg
gcaccgtaaaggcggagcagcattcttctcagcacagacgttgggggtactgcctgcctttgggataact
cggggccgcatcgagggtgaataaaatctttcccgtttgctgccctgaataatcaaggtcagagaccagt
tagaacggtttagtgtggaaagcgggaaacgaaaagcctctctgaatcctgcgcaccgagattctcccaa
ggcaaggcgaggggctgtattgcagggttcaagtgcagcgtcagaactcaaatgcagcattcctaatgca
cacatgacaccctaaatataacaggcatattactcatggagggttagggttcaggttcgggttcgggttc
gggttcgggtt
>CER   Human D22Z3 repetitive DNA (centromeric DNA).
ctgcagaacactacttccagggtctaaatgtctgtccttcacataggattccagaacactgctacgagag
tgtgaatgtttgtccttcacatagcatttcacaactgccatggtctgaatggttgtccctcacatagtat
tccagaacactgctatgagggtctgaatgtttgtacctcacataggattccagaacactgctatgagggt
ctgaatgtttgtacctcacataggattccagaacactgctatgagtgtttgaaagtttgtccctcacata
ggattccagaagactgctgctggggtctgaatgtctgtccctcacatcggattccagaaccctgctgctg
gggtttgaatgtctgtccctcacatagaattc
>BSR   Human beta satellite DNA - a consensus.
gatcagtgcagagatatgtcacaatgcccctgtaggcagagcctagacaagagttacatcacctgggt
>HSATII   Human satellite II DNA.
antccattcgggtccattcgatgatgatcacactggatttcattccataattctattcg
>HSATI   Human satellite I DNA HinfI fragment.
gantcngctcnngacacaactctctgagccttcggtgacctttcngtctngtgtaanngcactcntgtcy
ycctggcagcagttggacctcgcgatgtggattgtgccctcacccagcnntntttatgccctntcnccat
ggtgacnggattaggggtctcctgctcttcnntcctaaggaccactgtctgtgctgtgtctttcaaaggt
cagaagagattgnacctttgtgtttttattttccctgtgtttgctttttctcnntggggaacctgtgttg
ctgctttgaaggtatattcatactggccnntcanntgnncaacatcnncaaantnactagttanggcttt
caaaatatgntatttcaaaaaattanccgtctgtattttccatatgcagttataagtaggtttcatcggt
tatgttttattcctcagtttatacatttgattattgtaccaagcagagtacctttgaaattttttttcat
ttaaaaaatatggatctttaaaaaaaaattatatatgatatatattacatgttatgtgctatgccttatn
tgtaacatataacctcatatattttntatgtcatagtatataatatttatcctgtgtcatcttatatata
c
>R66   A 66bp tandem repeat - a consensus.
acagagtgctgattggtgcrtttacaaacctttagctagacacagagcgctgattggtgcgttttt
>SAR   Human satellite I DNA.
acataaaatatcaaagtacatcaaatatatattttattctgt
>SN5   Human centromeric SN5 satellite DNA sequence.
cttcccttcagggacctcaaagtgaccagcttccccttgaagaatgactctccaaggcccaggagcccag
cttctgggcctccaagccaggccatctggcgagggagtcggtggacgtgccctggcttcttccatgttga
gttggtactacccaccaaggggggtagagaggcgagcagatgttgtctctggcctgtgtcttgttatcat
ggtgctgactaggcctggtacagggccctgatggggttgtcctgggtggtcacgggggtgatgagaagaa
gatgcagaatggattgctgtgaggatgaatgagacgactgtcagtacagacaggcacacggtgaagtgtt
cagggattcccctcagtagctgcccagacccaaaacctgactcctgagtcacgttactgtcccactatac
gttaagaggagggaaagctgggtcgcgcaggtccc
>HY3   Ro(hY3) pseudogene - a consensus.
tagtcaantgaagcagcgggagtggagaaggaacaaagaaatttgtaactggttgtgatcaattagttgt
aaacancgctgcactccaaccagcc
>HIR   Human HINF family repeat DNA.
gattcccaggtgcacagagatcctaatccgcatccatcgaaatctcacaaagtgtccataaatcactcag
ggagggcccccatggatacagggccgtagtaggatgctcctatagtgggcattaatatgagaatgaccga
aaagtgcatttaggaccatattataattttcgggttcccaggtgcacgtttccaataaccaggtgcacgg
atgtatagggtcccccccatggatagaggtccgtgttagggtgctccatatcgggcatgaatatcaggaa
caccggcatgtgcacttaggaccatgttttaatttttca
>(GGAAT)   Satellites 2 and 3.
ggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaat
ggaat
>IVR   Repetitive sequence from human involucrin gene - a consensus.
caggaggggcagctgaagcacctggagcag
>KER   Human K element interspersed repeat DNA.
agctcatctgtccactgaagatgcttggacagagttaggaatgcttcctgggagaggtaacatttgagac
tttcctggaagaatggtcagagtaaaccaagtaagtaggaatggaaagaggatgggaggccccagcttcc
cagaggcataaggtgaggangnccctatgcattcagatgtggcccaccctggggtctggtggactaaagn
cttggacaccccagatcagccttagtgggatgaggcaggaaagacagctgagggtcagaacccaggcagg
tccaatgccagggtgggcatttcgagttggtgagacatttcaccctggtgccaagct
>MADE1   Human mariner derived element 1 - a consensus.
ttaggttggtgcaaaagtaattgcggtttttgccattactttyaatggcaaaaaccgcaattacttttgc
accaacctaa
>TIGGER1   Autonomous DNA transposon.
caggcatacctcgttttattgcgcttcgctttattgcgcttcgcagatactgcgttttttacaaattgaa
ggtttgtggcaaccctgcgttgagcaagtctgtcggcgccatttttccaacagcatgtgctcacttcgtg
tctctgtgtcacattttggtaattctcgcaatatttcaaactttttcattattattatatctgttatggt
gatctgtgatcagtgatctttgatgttactattgtaattgttttggggtgccacgaaccgcacccatata
agacggcgaacttaatcgataaatgttgtgtgtgttctgactgctccaccgaccggccgttcccccgtct
ctctccctctcytcgggcctccctattccctgagacacaacaatattgaaattaggccaattaataaccc
tacaatggcctctaagtgttcaagtgaaaggaagagtmrcacatctctcactttaaatcaaaagctagaa
atgattaagcttagtgaggaaggcatgtcaaaagccgagataggccaaaagctaggcctcttgcgccaaa
cagttagccaagttgtgaatgcaaaggaaaagttcttgaaggaaattaaaagtgctactccagtgaacac
acgaatgataagaaagyaaaacagccttattgctgatatggagaaagttttagtggtctggatagaagat
caaaccagccacaayattcccttaagccaaagcctaatccagagcaaggccctaactctcttcaattcta
tgaaggctgagagaggtgaggaagctgcagaagaaaagtttgaagctagcagaggttggttcatgaggtt
taaggaaagaagccatctccataacataaaagtgcaaggtgaagcagcaagtgctgatgtagaagctgca
gcaagttatccagaagatctagctaagatcaytgatgaaggtggctacactaaacaacagattttcartg
tagatgaaacagccttctattggaagaagatgccatctaggactttcatagctagagaggagaagtcaat
gcctggcttcaaagcttcaaaggacaggctgactctcttgttaggggctaatgcagctggtgactttaag
ttgaagccaatgctcatttaccattctgaaaatcctagagcccttaagaattatgctaaatctactctgc
ctgtgctctataaatggaacaacaaagcctggatgacagcacatctgtttacagcatggtttactgaata
ttttaagcccactgttgagacctactgctcagaaaaaaagattcctttcaaaatattactgctcattgac
aacgcacctggtcacccaagagctctgatggagatgtacaaggagattaatgttgttttcatgcctgcta
acacaacatccattctgcagcccatggatcaaggagtaatttcgactttcaagtcttattatttaagaaa
tacattttataaggctatagctgccatagatagtgattcctctgatggatctgggcaaagtaaattgaaa
accttctggaaaggattcaccattctagatgccattaagaacattcgtgattcatgggaggaggtcaaaa
tatcaacattaacaggagtttggaagaagttgattccaaccctcatggatgactttgaggggttyaagac
ttcagtggaggaagtaactgcagatgtggtggaaatagcaagagaactagaattagaagtggagcctgaa
gatgtgactgaattgctgcaatctcatgataaaacttgaacggatgaggagttgcttcttatggatgagc
aaagaaagtggtttcttgagatggaatctactcctggtgaagatgctgtgaacattgttgaaatgacaac
aaaggatttagaatattacataaacttagttgataaagcagcggcagggtttgagaggattgactccaat
tttgaaagaagttctactgtgggtaaaatgctgtcaaacagcatcacatgctacagagaaatctttcatg
aaaggaagagtcaattgatgcggcaaacttcattgttgtcttattttaagaaattgccacagccacccca
accttcagcaaccaccaccctgatcagtcagcagccatcaacatcaaggcaagaccctccaccagcaaaa
agattacgactcgctgaaggctcagatgatcgttagcattttttagcaataaagtatttttaaattaagg
tatgtacattgttttttagacataatgctattgcacacttaatagactacagtatagcgtaaacataact
tttatatgcactgggaaaccaaaaaattcgtgtgactcgctttattgcgatattcgctttattgcggtgg
tctggaaccgaacccgcaatatctccgaggtatgcctg
>TIGGER2   Autonomous DNA transposon.
cagttgacccttgaacaacacgggtttgaactgcgcgggtccacttatacgcggatttttttcaataaat
atattggaaaattttttggagatttgcgacaatttgaaaaaactcgcagacgaaccgcgtagcctagaaa
tatcgaaaaaattaagaaaaagttaggtatgtcatgaatgcataaaatatatgtagatactagtctattt
tatcatttactaccataaaatatacacaaatctattataaaaagttaaaatttatcaaaacttacgcaca
cacttacagaccgtacatggcgccattcgcagtcgagagaaatgtaaacaaacgtaaagatgcagtatta
aatcataactgcataaaattaactgtagtacatactgtactactgtaataatttcgtagccacctcctgt
tgctattgcggtgagctcaagtgttgcgagtatccgcttaaaacgccatgtgacgctaatcatctccgcg
tgagcagttcgtctctccagtaaattgcgtatcgcagtaaaaagtgatctctcgcggttctcgcgtattt
ttcatcgtgtttagtgcaataccgtaaaccttgaataacaccatgggacccatacgaagtgccactagtg
atgctggaagtgctcccaagaagcagagaaaagtcatgacattacaagaaaaagttgaattgcttgatat
gtaccgtagattgaggtctgcagctgcggttgcccgccatttcaagataaatgaatccagcataaggacc
attgtaaaaaaagaaaaggaaattcgtgaagccgtcgctgcagctatgccagcaggcgcgaaaaccttgc
actttttgcgaaatacctttttatctcgtattgaaaatgcagcttttatgtgggtgcaggattgctataa
gaaaggcatacctatagactctaatatgattcgagaaaaagcgaagtcattatatgacaacttaaagcaa
aaggaaggtgaaggatctaaagctggagaatttaatgccagcaaaggatggtttgataattttagaaaga
ggtttggcttnaaaaatgtcaagataacaggagaagcagcttctgccgaccaagaggcagcagacgagtt
cccagatgccattaagaaaatcattgaggagaaaggatatctgcctgaacaggtttttaatgcagacgaa
agtgccctattctggaggaaaaaaatgccacaaaggacatttattagtaaggaagagaagcaagcaccag
gatttaaggcaggaagggataggctaactctactgttttgtgcaaatgcagtcgggtttatgatcaggac
tgcccttatctataaagctgctaacccccgagccttgaagggaaaagataaacaccagctgccagtcttt
tggttgtacaacaagaaggcctggacaacgagaaccctttttctggattggttccatcgatgctttgtcc
ctgaagtcaggaagtaccttgccagtaagggactgccttttaaagttcttttgatattggacaatgcccc
tggccacccagaaccccatgagttcaacaccgaaggcgtcgaagtggtctacttgcccccaaacacaacg
tctctaattcagcctctagatcagggggtcataaggacctttaaggctcattacacacggtactctatgg
aaaggattgtcaatgctatggaagagaaccccaatagagagaacatcatgaaagtctggaaggattacac
cattgaagatgccatcgttgttacagaaaaagccgtgaaagccatcaagcccgaaacaataaattcctgc
tggagaaaactgtgtccagatgttgtgcatgacttcacaggatttacgacagagccaatcaaggaaatca
tgaaagagattgtggatatggcaaaaaaggtggggggtgaagggtttcaagatatggatcttggagaaat
tcaagagctaatagacaccacaccagaggaattaacagaagacgacttgatggagatgagtgcttccgaa
ccagtgccagacgatgaggaagaagacgtagaagaagcagtgccagaaaacaaattgacattagacaatc
tggcagaagggttccgattattcaagactgcttttgacttcttttacgacatggacccttctatgatacg
ggcactgaaactaaagcaaacggtggaagaaggattggtaccatatagaaacatttttagagaaatgaaa
aagcaaaaaagtcagacagaaattacgatgtatttccataaagttacaccgagtgtgcctgcctctcctg
cctccccttccacctcctccacctcttccgcctctgccaccctgagacagcaagaccaacccctcctctt
cctcctcctcctcagcctactcaacgtgaagacgatgaggatgaagacctttatgatgatccacttccac
ttaatgaatagtaaatatattttctcttccttatgattttcttaataacattttcttttctctagcttac
tttattgtaagaatacagtatataatacatataacatacaaaatatgtgttaatcgactgtttatgttat
cggtaaggcttccggtcaacagtaggctattagtagttaagttttkggggagtcaaaagttatacgcgga
tttttgactgcgcggggggtcggcgcccctaacccccgcgttgttcaagggtcaactg
>GSAT   H.sapiens gamma satellite DNA.
gaattctgggagccttccaaggagggctttctcatcccagacgcccccatatctgttccgggcaggctat
aaagcccaaggctttggagcagggtgcctgtttctctccaaantcgcatgactgcaggtcgactctagag
gatccccggcggaaggcccgacaagagaaacccgggccgcaggtggcgttggcgggccgaaggtactcag
gatgacgttaaggcaggaagaggagagccacggtgagatcgcagagaatggtcagagncctccctagaag
gccctctcccattccagaagccccccaggactttcccaggcagtgctgtaaagccaccaagctttggagc
caaggtgactgtgtctcttgaggaagggcccgccacaaccaaaaacgttgcccgcctgatggcgtgnctg
gcctgcagggactcagggggatgtggagncagncagaaaggagaancaacgagactgcaggaaatgctag
gancctcccaagaaggactttcttatcccaggagtttcaagggctgtcctggtcggnctgtaaancccca
ggccttggaacagggtgcctgtgtctctcattgaagnccccaacaagagaaaacggtgctgcagggtggc
gtgcgctggccgcagggactcaggaggatgttgagggagacagaggggtgaagcgttgagacgactggga
attc
>GSATX   centromeric sequence.
gaattccggatccaagtctactcttcagccttgntgattttttccttgggntgcctcaacctccccctga
aagtctggtgtcctgtaactgttcccctagggatatcttcccactttggggtgccccccatgggagaaac
acacacccttggtgaaagccagggactccacgacccccttgggcccggctctggaactgctggaaaggca
ctggtctctggtagagtacaccagcctcctattcggactcgccacttttttcctccagctgcctcaatgt
caccctgaaatcctggcatcgtgaccacgtccctcggggacttcttgtcatgttgggcgggccgcctgtg
gggacagacacacacaccctgtgtgaaagnccaggggactccacaacccctgcagggcccagganaggag
ctgctgggaaggtactggcctccagtggaagacttcagncctccatttcagcctcgccgcttttttcctc
aggctgcttcaacgtacccctgaaagcctggnatcctgtttcagtcactcgggatacttattnccacttt
ggggagctcccccgtaggagagacatgcaccctgcatgcgtggcctgagaaaaaagtggtgaggacaaag
aggagaccaggatgccccaccagaagacagcgctttcccggcagcccctgcgcatgacccaggtgggtgg
tggagtccctgaccccactaggggtgtgtgcctctcccacagaaggcaccacaaagcagcaagaagtccc
ccagggaacagagaaaggcagccaggctttcagaggggaggtttgaggcaggcttgggacaaaataggga
aggccaaaagaggacgcctgggtnccttcgccagaggtcagtgccttcctggaagctcccgagcccgatc
tgggggagtcctgacgtccctggccctcatgcagggtgcgtgtctctgccacagaaggcaccttnatgcc
gcaagaagtccccaggggacagagacaggcggccagnctttcagggggaggatgaagtaggcctgggaca
aaagcggcgaggccaaacgaggtcagggtgccccacaggaggtcagggccctcctaacaacccctgcgcc
caaaccgggggtgtcgtggagtccctggctcccaccaggggcacgtgtctctcccaccgaggacacccca
aagctgcaagaattc
>HERVL   sequence.
[encoded data, 5680 characters]
attatgtatgatctcaggagatgtgtatgggttcaagttgacaaggggtggact
>HERVK   Internal part of human endogenous retrovirus HERV-K; clone K-10.
[encoded data, 7313 characters]
gatggcggttttgtcgaaaagaaaagggggaaa
>HERVR   Baboon endogenous retrovirus (BaEV), internal part.
[encoded data, 7455 characters]
gatgaagaagctcaagattgagcctctaagacacaagaaaag
>HRES1   internal fragment.
ggctcgctggggataatatcgcagctgaaaccgaacatcaagctggcttttcaaaccttcagttatttac
attagactgagaggggaaaagcgctaagagtgcaagagcagagaaagagcaagaggaaacttgaaaaggc
ggatcacgcaatgcgctgtgcacacgcccccgccccgcgcacccgctaccccacccgagcccccagcggc
ccgcgtcccccatcccggtcccaagcccagacacctccgagatccgtcccgcggctccggccgcgccacc
gccaccctcaagacccccgcagcccaggcccggccccgcgccaccgacgccccccgcggcccgacccgcg
cgccccgccagcccgggcctcgtaccgtaggtttcggacatggccgtctgcgacatcttgggagcggcgc
cgcctctcgccgggtcaccgtgcactcgcccgcggtccgccggcgcgtctcggtggggaaggacctgggg
cgggggaccggaggagggaggggcccgaccggtccccacggcaaccgccggtcctcccagcggctgcggc
ccagccggactccagctccgcgcaggcgccagggccctccaccctccgtccggccgcgaccgcgaggagg
aagaggagatgggctacgcgaggcccggcccaccccgcgttcgcgcgtgcgcacggggaggccggggcgg
ggcgcgtgaggacttcggcgcgcgccggaagcacgtgcgcgggctgggcgctctggcggtgtgcgctgag
gtgggcagagcggcaggtgggggcgttgggggctgagtcccgatttccctgagggagggtcgggtagagg
cgggcggtgggcaggtttgggggtgacagagggctggggacagtggggtccagttgccggacagaggagg
aaggtgcccgcactggggaggaaagcagtccatttgccaaattggcccgtctcagttaagacgttgtctt
cggtcatcatctgcggctgtcagccaggaaaaaacttccctgacgctgttacgatggaggccagaacttg
gttaatgtgtaacaaggaggcagtaggccccaggtgtccagccagaggccgccctgtgaatgggaggcag
gttcatttacccgttggacccgttgggaagctaagctt
>HERVE   Human endogenous retrovirus; family HERV-E; internal part.
[encoded data, 7881 characters]
taagaactcccactaaaagtgaaaattctcaaagggggggaaa
>HERVH   Internal part of endogenous retrovirus RTVL-H (HERV-H family).
[encoded data, 7810 characters]
aagaaggcaggaa
>HERVI   Internal part of endogenous retrovirus RTVL-I (HERV-I family).
[encoded data, 7881 characters]
atttaacagggggat
>LTR14   LTR of human endogenous retrovirus HERVK(C4); LTR14.
tgttgggaaaaggacttgtggggtgcctgtataaactggccataaaaatatgggacaataagttgtggaa
agccacaagaggcctctgaggagaaaagcctcctaattgccacgctcagagcgagacctgctctctctta
tctgtaaacactgtattcaaggagaaagaccctcctttgaagcattggaatgtggacagacgtgcaggct
cctagttaagcccactcccactagctactctccgataagttaaagatatgctgtttgagcacaaaggaga
ttcatttaaagcgcttctgctgtagattatgcctgtgacgcactgctaccctttcactgttttgccctga
acatctgcttcttagatctaagttattgtactcaataaatagtgtggagaccagagctctgagccttttg
cagcctccattttgcaattggccccctggcctccactctttatgaactcttaacctgtctcttctcattc
ctttgtcaccaccagacttcaggtaccctacaggtggtgttgaggctggtccccaaca
>HERVKC4   Internal part of endogenous retrovirus HERVK(C4).
[encoded data, 5325 characters]
gggaggggggca
>MER4I   MER41I, MER57I and MER65I retroelements.
tggtaaccatggaagggattctgagtggagatgcccctgacctttgacaaatctcctatcggtgcttggt
accagcatgagctaactttatggcycaagctcaarwtrtctttatkgctcaaaccaataggacaatttgc
tgaggtctgrgagcatctccctccagagaatccctgatctcccaaaatttggtcgagatctaargtttat
tttgctgtacaactcctctttttttggagttttacttgcttccaacacaaggaaggcgagtttttcctgc
ttccatgatgatggaaggcaggtaactcctttmtggagtttsagctcgcttccaacagggaagrtgagtt
ttttttcctgcttctaggatggtagagagcagtcttcagcctgagacccattcctaggtaagtaactgaa
ttggggtttgtcttggaaattctccttcttggctaaaagttaagattaacaatcttggaaattctcctta
argactaaaagttaagattaacaaccagctggtcttaatttctccttaccattagagcgctcagtaatca
tataagttgtgcgatcatttgttttgcttaactgcttytgtttttgttgtttttgtttgtttctgttttt
gttgttgtttcwgtctttttcctattgggtttgaccaactctatccgacttgatcagtgtggtgggggga
gaaaaacggccagcaaaaggaaaaaattgancttgtttactttgactactaaatctgaaggagaattcca
aattatggggaacaaggcctctgaagtggctaaattcccacaaaaaaaaaaaaaaamaaaaaaaaaacaa
ggcyagctttttgctagccaggccaaactgaaagagcaatggctgtcaccycacgctgcagttcwatagc
taaggtyctgcnttttttttttttttcaccgtgacagcctgggtttggttcytaaatcaagccctttctg
gtttgatasttggtacttctgaaatagcagcwgtttgtcctagctaaaatatggtaatgagatttkaaag
gatttttttaaaggagctcaatggttaaaagtcagcttaattaaaaggctaacatccaagatgtatgtgt
gtatgtgtgcgtgtgtatgtgtgcatgtgtgcgtgtttgtatttaaaaggccttcatgtttttgtttcgt
cgtttgtttttctctcctaagaccttgtctttttttgagcaaagtttttttcttctcagttgactgaatt
ctgttttcttcatttacttttcttccaccctgttcctccttccctttgccatcttykgyaccaagtgaar
rgayctagaraaggcttctaatracttgagaccccttaaagaacwcagaaaaaggtgccacwcacccctt
tttgaggrtaaacttctgtttttccttatgggacctcaaaagtagtaaahagacagattcctctcaggtc
taaagctctgctytcttttgyattgcgttacctgattttttgactaaaatagttattgcaacagaggcta
ctcttgggtttttaaggaagagtgtagtgtagacacttagaaatgtctttgtttaaaaakttaagtrcac
tgtaaaagcatcatrtggyttagyctcatrataattctccctttttrgagacccagcattcagtgtgggc
tctgcccagagctcagtgrtccagttaaaaataggtagtctctatytaaataaaattggtctccttataa
aatcctatgatagatttctataattttatgtttratttggcatcaatytttaatcttcctctagcaccac
cagactttttctctctgtactttaagatgtaaattttgctatytgatttttcacctaagagttgtttcct
ttaatatgcaaatttagggctatttagctgacaactgcctagggtaatgaaacaggttatcaagaatttg
aaagtctaagataggaaaaaaaggrggtcttataaatctataagatgtacttctatcagcatgcctaata
cgtctatgtatttatgtgttgtgtacacaatgtttcactactaaaaatatataaaagagctctaattaat
tggcttaaagaaaaataaaagtgcttaaatcaaatactttatcaggaaaaaagaaaagactagtcaaatg
ctttttcaagttyatgaaatgctttttcaagtttatgtaacttaagtaaaatctttaataaataagctag
ctttaaaattattggtaaagtaatattagaaatgtcttaagaattgccagcatacatttttgtttgcatt
atattaatcaagcartttcatacttatccctgccaaatactataaaggtgtcaaaatttggcataggggt
tayaaaactataaacccagcccaaaacagaatgatctttgcttgtgtaatttttaataaataagacattg
atattggtttaatgaaaayagctrcatcttgaatttagtaagattaccataacttctaaccttgtggctt
taggcgrty*tttaaatgatgactatcgcagttttcataaataatctaggtaaacaattaataaaataat
taggtaaatgtaatgggataaatacttgtagacaaacttgtcataatttagaatataaagttatattaaa
ttaaataatagatawttwattatttgrgtattttccaataaaaatatattgtaggaaaacattcttkctt
aaaaaaaagtgtgtcctttttaaaaaaatggtgaataagttttgtctaattcaaagcttatttaaaggtt
atrtataaaacaaggtaaaaggaaccaggaaataaaaaaaatgtaaagaaagttataaaaataaagaggt
attttttgnargtaaaaaagctgaaaragaaataattttatatgagaaagaatcttatatggtaaattta
tgagaaagaatcttgtatggtaaatttttgtcctaaaataaaatgactggtttttaagaaagaggwtgtt
taggacaaatcagaaagtccaagcatgttatwaatggtctgtgtaagtcataataaggtttgcataaaga
gaaattaaaaaawtttatatgattaagttggctataattaaaagraaattatttataatagtctttctag
agattgakgtttgatattaaaaatacactaatacactaaaaattkgttagaaaaacaaaattttcttaaa
gtattgatttaytcataaaattacaagagattttaattttaatccaaaaattcaacttttattgcatctc
actgttttcaagctttttctcctctttgagaaggcctgagataataactctctccttcaacttttttgtc
agctcctgtaattttttcctchggttctaactgytgttgtggcctgatgctaaaaatgttttatyttaaa
ggtctaaaagmaatgttttcttccaatataacattctgtactckkcttttcttgatgtgtctgaattgtt
ccatgaaaccagaaaacttcactcataaccctggayacactcttccttgtctaattaattcaagtactat
tttcatcagtttgacttcaggttatctaaagggcttcccataaggagaagcaatcacactgcagaaggtt
tttcttttsctttttggtaactggcctaagaaaaagattttatgttttatcaagataatttttgtgttat
tattattaagtttttgatttgcttaggaaaactgagattaaaattttttaaattaaggttattacatcca
tgtatctttctgtattgcttttaaagtccttgtgacattgagttacagggctttaactcctgggtctaaa
aaggacaccaagtcctgctaaatcttaaacactgacagcaattaaagccycatcttcaggcccgtagaag
atgccaatcaaaataaactgcattcctgagacacaggaaattaaagctattcaactcctcaaggcccagg
gactatccagaagaggtgggcacgtgagattgtaagggccaattttgaaagataaaataagttcaragtt
tctctataaattaatcattaaaagtttctctataaattaatcattrawatcaaaggcacactgatgcaag
accagcatatgggcccctgtgtcagattaacaaggttttcttgaagcattaacckactccttaataaagg
ttgtaaaggttataaaaggcttatgraaattatatcttatggtcaagattaaaattttatagattgttta
taaaattttgaaaaacaaatttaattggcttcatgctgtttttattagggcttattgtttggaaaattaa
gtctcctctctcaaagaatgaaggtttttgccttttttgaaatccttgagttatcactttggttaaatga
atgacttattttacaatgacctgtgattctattttgtgatatcaagtgttttaaacctttgatatttgac
aaactttccaaaatcaaattataaattatgtctttctgacctaattaatcctttaagatattaggttcct
taaagtccaaaaatgacataatttggcttatttggtacaaaaattatayaggaagcattgtcaaatatga
aaaatgtttaancytctttgggttrtatttgtataaatatgttattggtatatgttccaaaattatatga
aactcctataattctgatatrtcttagtgtatattatcartaataattataattattatgttaaattatt
gtatgccacagargtaaccaaatttcctcgtcaattgtgtctttaactatggctgttctaagacttttgt
catccacggacaattgttttattttgrtcctytttaaaaggtagtttataatcagctatagractctaac
aagcgctcttaaatrcaggtttctgataactttggagattgtgacatcggaatagaggaaaaactttcag
gactcatggararctaatgtgttcatgaggattgctaacccaacatcgagcaagcagaacaggaattaac
tgcatggactgaaccaatagaagabtgaaadaatctttttgactttttgcttaaaacgttgctgatcctt
tgttttgtttttcagagtcaagaaaacttttcttttgagctatttacagcttttaacaattgagtatagt
atactcctatgaacaaaatttggagcatatttgtttctctctacctgatttctccagaatttggaaacta
tttgtgagtattcttaacttatggcaatacagttatttgcataagtgcaataagaatctgttttcatttg
taacaggacacaattggagaaactggttattttaccaaggctttgactggaatggtgtactttcctttaa
ggaatcaaacttgacttatggagccaataaaagcccttggaaaaactggcctcataccttgtbtacgcag
tccctgtacaaggtttctgacctgtggtaagtaaagaatgtcactttctgacaggcccaggagccccarg
tttatcttggaacctcaagaggagaggaaattcacccaattcataggtatttgawggcgcaaatccatgg
ctgggctcggctttaaaaaagtcttatctgagattccttctatggaaaaaagttccakcaaagccaattt
aaaaagagcctatataamaaatmattattcttgctgcactttatgcaaataatcaggccaagtataataa
gastaaaacttattttrhaaacaaattggtcctaccatgatttgtctttagtaaaaatgggaaactggag
agagaaaaattatgtttcaaaaactatagtatacctgttattagattctagttgtttttcaatttttatt
attttctacagtttggactgaattctaaattttttcctggctacaagtctccaaaataatgttttcaata
ctttttctttttttccttccwtttttcccatttttcctaatttaaaatcactraaaactaaagctgtgct
tktcttaaagccctgcaaactgaarctagacaacttaaacttcagaagaaaataatagcaacctatttac
atacataagccactttcatacctgcctactgatgtatngacttcagagtaatgtgrcctrtrtcaatttt
ccaggattgttcttttgtttgttgttgtttttctcccttcctcctcctattttstcttcataggacatga
gacttcacaacctgctaaaaatragctttcctaawawctcgggacctacccgtctaggaataaactatcc
tagccacgagagatcagacgaaacctgagaccagagactcattttcttctaaaatgctttctccaaaaga
ttttagaaaagaagggaa
>MER49   internal sequence belongs to the MER4I group; MER4 subfamilty.
tgtaaactaaaaataaaatcttaagccccccgccgactgaacggaccccctcttggccaaggggacccca
gagaaaccttaaaaactgagttcccggccatgacgggatgggaggtcagacacgcctcattataccccct
cccttttgtggtttagacacaacaactgaccagcattaatgttaaaatagagatcataagactgacagaa
cggactctttgtggcaataagataccaaattataaacaggacctaaggccatgccaggcaagggttaagt
cacgcacccctacacttaaagaataaactatgttctaactgccacaaggtttttctttttctctaacagc
taaacaagcactggcctcgagataagcaatattaaaacaattgcagctcatccascaccagacgctgact
aactgaccccctgttccaccagccataactacagctttgattggacaagagactgatttcagtaactttc
tcctgataagagaccaccggccatggactggttctggccagtttacagaggctgtgcacttgcacgcctt
cgtgtcctgaaaasaccttttgacgtatagggcctaattgtaatacatttaaatgttaagtctccacccc
aaagtgaacatgggtcgtatgttacatgcatgtttgttcaatacgcatgcgtcaggaccaccttcatgaa
tattcatagctcctcctgtaacctgttgaatatgtatgcttagccaacccgttcagcataaagctcctgc
cccaacccctcctccttcgaagtgcctgtctctggtcttggccagaggctacgcttcccagcctgcggga
tggccaccttgcaggctgtaaccctttataagaaataaagtctcctttccaaatttatagatctcgtgat
ttttcagttgaca
>MER4D   internal sequence belongs to the MER4I group; subfamily MER4D.
tgtaaaccaaaaataaaatcctaagccccccaaccgactgaacggatccctctcttggccaaggggaccc
caragaaacctgaaaaactaattcaggccataacgggaagtggggtcagacacgcctcattatagcctcc
tccctttggagttcaggcacaactgaccagcattaacattaaaacagagatcataagactgacaaaacag
actntttgtagcaataagataccacgaggacgaagytctkatttttttatcttgcccaaattcctatgta
aggggtctagggagtcgcgccttacaaaccatgaattctcattagatgggttttattaaaccctgtatat
cgtgacttaatttccaacctgactctggtatagcatcacatgacagatagcagaccctgaaggaaatcaa
aatattttaccccaaaatatatttctttgacatattttgaaatggccctgcgaagctgtctcttgtgggg
aaaatctgcattctgtagagaatctctttccctttctaggtctttttccctgatccaggggagaataact
gagagtctggcaccttttaaggtctgataagagaaawttaccatctattctctctgaagcctgctacctg
gaggcttcatctrcatgataaaanccttggcctccacaactccccttatcttcactcgattgatttcaay
tctttagacagagcttaactctttcaaccaattgccaaycagaaaatctttgaatccacctatgacctgg
aagcccccgcttcgagttgtcccgcctttcckgrgcgaaccaatgtacaccttacatgtattgatttatg
tctttgcctataagttccgtctccctaaaatgtataaaaccaagctgtancccgaccaccttggrcacat
gttctcaggacctcctgaggctgtcacgggccatggtccttcactttggcaaaataagcctctatttaaa
ttgattaaaatctgtctcggatattttttgctttaca
>MER39B   MER39B - a consensus.
tggttggggctcagaaaacaataccgcaaaatgaaggcctcagaagcaaartttttctctgaccttctcc
cgccctcctgtctctcagtcccattctcccctccccgaggctagccatagaaactagaatctctcttccc
caaggcaggtcatagaaaccagaacycctttcctscaaagccagccataaaacctaaaaatattactcta
actttccctccacctttctgtgtaaaaactggccataaagaaattatctgacctaccttgtttgattgta
ggtcataagacccccattccagagagggccccgccctatanccggaaggaatgcgtgctcagagaagcca
agaagaatctagacagacaggccttgctgggtttccccactcagctcattagcattrgatcatrgccttt
ttgtccagtcatatttctacacggctgtccattctttgttgaacctaagcataaaaatggacaattttcc
ctgtatctttgggtcttcattctgaaggctcccgtgtatacagtgtatacatgttarataaatgtatatg
cttttctccattattctgctt
>L1P5A1   L1P5A1 - a consensus.
ggtggctggcaagatggccgaataggaacagctctggtctgcagctcccagcgagatcaacgcagaaggc
aggtgatttctbcatttccaactgaggtacccggctcatctcattgggactggttagacagtgggtgcag
cccacggagggcgagcagaagcagggtggggcgtcgcctcacccgggaagcgcaaggggtcagggaactc
cctcccctagccaagggaagccgtgagggactgtgccacgaggaacgrtgcattccggcccagatactat
gcttttcccatggtcttcgcaacccacagaccaggagattccctcgggtgcctacaccaccagggccctg
ggtttcaagcacaaaactgggcagccgtttgggcagacaccgagctagctgcaggagtttttttttttcg
taccccagtggcgcctggaacgccagtgagacagaactgttcactcccctggaaagggggctgaagccag
ggagccaagtggtctagctcagtggatcccacccccacggagcccagcaagctaagatccactggcttga
aattctcgctgccagcacagcagtctgaagtcgacctgggatgctcgagcttggtggggggaggggcatc
cgccattactgaggcttgagtaggcggttttcccctcacagtgtaaacaaagccaccaggaagttcgaac
tgggcggagcccaccacagctccgcaaancggctgtagccagactgcctctctagattcctcctctctgg
gcagggcatctctgaaagaaaggcagcagccccagtcaggggcttatagataaaactcccatctccctgg
gacagagcacctgggggaaggggcggctgtgggcgcagcttcagcagacttaaacgttcctgcctgccag
ctctgaagagagcagcggatctcccagcacagtgctcgagctctgctaagggacagactgcctcctcaag
tgggtccctgacccctgtgcctcctgactgggagacacctcccagcaggrgtcgacagacacctcataca
ggagagctccggctggcatctggtgggtgcccctctgggacgaagcttccagaggaaggaacaggcagca
atctttgctgttctgcagcctccgctggtgatayccaggcaaacagggtctggagtggacctccagcaaa
ctccagcagacctgcagcagaggggcctgactgttagaaggaaaactaacaaacggaaagcaatagcatc
aacatcaacaaaaaggacgtccacacagaaaccccatccgaaggtcaccaacatcaaagaccaaaggtag
ataaatccacgaagatgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaaccagaacgcctcttc
tcctccaaagaatcacaactcctcgccagcaagggaacaaaactggacggagaatgagtttgacgaattg
acagaagtaggcttcagaaggtgggtaataacaaactcctccgagctaaaggagcatgttctaacccaat
gcaaggaagctaagaaccttgaaaaaaggttagaggaattgctaactagaataaccagtttagagaagaa
cataaatgacctgatggagctgaaaaacacagcatgagaacttcgtgaagcatacacaagtatcaatagc
cgaatcgatcaagcagaagaaaggatatcagagattgaagatcaact
>IN25   a consensus.
gtggaaagttcctcatagcagagacacaattgcagtgctgggtacagtagggaaagtctgcacctttacc
ccaacaggcaggcagcctctgtgatcatgaagggtcttggagaagggatccttgttccccnctggcnctg
gtannccactgcagacacagctggggcttctcccacaggaacgcagcatggatgcacctatagacagcat
tcctggaacaattcagggtgattgcagccccacaggaggagcactctccagattcaggcctncatgagag
gcagtcacaattcctccctacttggaacatcaanattnctacagatgaaaagaggtgcctgtctgatctg
aatagctggaacactgggacaggagtgaggctgtgaggtggacagntttcctgctgacctggcangngan
ctgaggtagctcccacccttcaccctganaaaacctcagcacatctaattgagagctcncccagccaccc
tcatcaaggctgggacctttgcccactattggatattaaatctacccacctactttagctacanctggtg
cctacccagggatacctcccttattgccctnaagcctgaatcatcaactcagtaaataaaatactgnsga
gggaaaaattaaataaataaataaataaagtgtacacyackagagaacgagataagcttcawgagaycyc
tgccattccaacyccataggagacagtgaactcgcycacacaccaaghacgtmactactacaaccagcat
ctgrgaaakycakcacacaaagactctctataacyaaggaactcatacagagtcttcacccctamaagca
ccmagagycaaatt
>MER61   internal sequence belongs to the MER4I-group; subfamily MER61.
tggtagtgagacagccagatgggaaggggtccccggagaaactccaaccggcctgcgcactgggaggart
gcgcactggggtggagccacagaagttcgcgccatttgcagcggggaggagcctggcccctcctcttcct
gggtggaacctgggattcgaactgcgaggcgggaagtscactagcaggaarcacagtctctcrctttgct
gagrgtccctgtttccccttttcttccttttcacysaataaaaycycgycttactcacccttcaaattgt
ctgcaagcctaawttttcgtggccgtgtgacaaggaccccgtctttagctgaactaaggaaaagtcctgc
aaca
>MER60   5' part of L1M subfamily.
tgcagrttgctagtgccagagggagcaaagaattgtgattgtggattttaattgctggcagctccctgaa
ggactcacaagtctttttttctcggctgaagtggttcaaaaacatttaaaggcacatttgctggagcaag
ggacaacatgrgrcaagcaayagatagaccaaaaagcctaagaaggaagagmtgagaaataagatgcttg
gggaaawaagggctttgaaaagtccacatattcctgggaatctagaaggccatgcacatgtccagggctg
gacacatgctcagaaaagacctaagaaggccctaagctttcacctctggctgaccttnagactctgtaca
agcaggaagtgaaggctaaggcagagttgtaaactgccttggctgagtgttgaaggaatgccycaacaca
cagmcaatctgcaaagactaggagactttttttttgtgtttggtddtkttgttgttrttccaggtattta
aggaaayctctgtcaawyactagctgaccactaagctaaycgarcagagacttcagtggccacacatgac
aaagaatacagactttacaaaattagtttagaaaagtcactaaacaaacaayacaacagcamayaayaag
caacaacaacaaaccctggaaaggggagagaatctgatttccagagttgccacattatawtatttaaaat
gtccagttttttttttcaacarcaacaaaaattatgaggcatacaaagaaacaaagaaaagtatggccca
tacacaggaaaaagaaattaatagaaactatccctgaggaagcccagacattgracttactagacaa
>HERV3   Partial internal sequence of endogenous retrovirus HERV3.
ctgggtattcgccctatgaaagactgttcggcaagccatccccaatcataagtcaaattaagggtaatct
tcgtgaactaggggaattaactttaaggaggcaaatgcaggctttagggatagccatgtgaagtgtccat
ggctgggtacaggaaagaatgcccataagcctgatagatccaatacacccctttaaacccagggactctc
tttgggtcaaaaaataaaacccaaccactctgggacccatatgggatgggctccatactgtaatcttgtc
tattcccactgttgttaaagttgcaggaattgtgccttggatccatccatccagtcagctgaaaccagca
gcccaggacaagtggaccagccaacaggacctagaccatgcaacccagctgatcctacgatggaaccaag
gtgccagtgagatgacaacagccctgctctggtcactccggaagctgaccagtccacgcacggctgaagc
ttgaggagacaacagccctgctctagtcaccccagaagctgactagtctatgcacggccgaagcttgagt
catcatcagggaagtaaatgtggttagaaatctgaagtccagtaattttccttgtcatattaattacttt
gctattaagctgtcactttgcttagccttctccccccaggaaaaagccttttctgtccatgctgggtatg
aacatgctactcatcactttgttcttgctactccccttatccatgttaaaaggagaaccctgggagggat
gcctccactgcacccacactacgtgtcggggaacatcatgactaaaaccctgttgtatcacacttattat
gagtgtgctgggacctgcctaggaacttgtactcacaaccagacaacctactcagtctgtgacccaggaa
ggggccagccttatgtgtgttatgaccctaagtcttcacctgggatctggtttgaaattcatgtcgggtc
aaaggaaggggatcttctaaaccaaaccaaggtatttccctctggcaaggatgtcgtatccttatacttt
gatgtttgccagatagtatccatgggctcactctttcccgtaatcttcagttccatggagtactatagta
gctgccataaaaataggtatgcacaccctgcttgttccaccgattccccagtaacaacttgctgggactg
cacaacgtggtccactaaccaacaatcactagggccaattatgcttaccaaaataccattagaaccagat
tgtaaaacaagcacttgcaattctgtaaatcttaccatcttagagccagatcagcccatatggacaacag
gtttaaagacaccgctaggggcacgagtcagcgatgaagaaattggcccaggagcctatgtctatctata
tatcataaagaaaactcggacccgctcaacccaacagttgcgagtttttgagtcattctatgagcatgtt
aaccagaaattgcctgagccccctcccttggccagtaatttattcgcccaactggctgaaaacatagcca
gcagcctgcacgttgcttcatgttatgtctgtgggggaatgaacatgggagaccaatggccatgggaagc
aagggaactaatgccccaagataatttcacactaaccgcctcttccctcgaacctgcaccatcaagtcag
agcatctggttcttaaaaacctccattattggaaaattctgtattgctcgctggggaaaggcctttacag
acccagtaggagagttaacttgcctaggacaacaatattacaacgagacactaggaaagactttatggag
gggcaaaagcaataattctgaatcaccacacccaagcccattctctcgtttcccatctttaaaccattct
tggtaccaacttgaagctccaaatacctggcaggcaccctctggcctctactggatctgtgggccacaag
catatcgacaactgccagctaaatggtcaggggcctgtgtactggggacaattaggccgtccttcttcct
aatgcccctaaaacagggagaagccttaggataccccatctatgatgaaactaaaaggaaaagcaaaaga
ggcataactataggagattggaaggacagtgaatggcctcctgaaagaataattcaatattatggcccag
ccacctgggcagaagatggaatgtggggataccgcaccccagtttacatgcttaaccgcattataagatt
gcaggcagtactagaaatcattaccaatgaaactgcaggggccttgaatctgcttgcccagcaagccaca
aaaatgagaaatgtcatttatcaaaatagactggccttagactacctcctagcccaggaagagggagtat
gcggaaagttcagccttactaactgctgcctggaacttgatgacgaaggaaaggttatcaaagaaataac
tgctaaaatccaaaagttagctcacatcccagttcagacttggaaaggatagtctccagattcccttttc
agaggttggttcttatcccttggaggatttaaaaccttagtacaaatagtcctagccatattgggagttt
gccttatactcccttgtctcttacccctcattgtcaaaaatatccaaacagccatagaggctcttgtgga
cagacggactaccacacgactaatggccctaactaagtattaacccctgccaagaaaagagctacttcct
cttgaagtaaatgaagatagtgatgctttctcttaaactttacttataaaaagcatcaaaggggggaat
>HERV9   Internal sequence of endogenous retrovirus HERV-pHE1/HERV9.
[encoded data, 8519 characters]
>HERVS71   Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 6106 characters]
gtaaccctggccacataccctggaggattgacctggtcctcaacacttt
>HSMAR1   Human mariner - a consensus.
ttaggttggtgcaaaagtaattgcggtttttgcattgttggaatttgccgtttgatattggaatacattc
ttaaataaatgtggttatgttatacatcattttaatgcgcatttctcgctttacgtttttttgctaatga
cttattacttgctgtttattttatgtttattttagactatggaaatgatgttagacaaaaagcaaattcg
agcgattttcttattcgagttcaaaatgggtcgtaaagcggcggagacaactcgcaacatcaacaacgca
tttggcccaggaactgctaacgaacgtacagtgcagtggtggttcaagaagttttgcaaaggagacgaga
gccttgaagatgaggagcgtagtggccggccatcggaagttgacaacgaccaattgagagcaatcatcga
agctgatcctcttacaactacgcgagaagttgccgaagaactcaacgtcgaccattctacggtcgttcgg
catttgaagcaaattggaaaggtgaaaaagctcgataagtgggtgcctcatgagctgagcgaaaatcaaa
aaaatcgtcgttttgaagtgtcgtcttctcttattctacgcaacaacaacgaaccatttctcgatcggat
tgtgacgtgcgacgaaaagtggattttatacgacaaccggcgacgaccagctcagtggttggaccgagaa
gaagctccaaagcacttcccaaagccaaacttgcaccaaaaaaaggtcatggtcactgtttggtggtctg
ctgccggtctgatccactacagctttctgaatcccggcgaaaccattacatctgagaagtatgctcagca
aatcgatgagatgcaccgaaaactgcaacgcctgcagccggcattggtcaacagaaagggcccaattctt
ctccacgacaacgcccgaccgcacgtcgcacaaccaacgcttcaaaagttgaacgaattgggctacgaag
ttttgcctcatccgccatattcacctgacctctcgccaaccgactaccacttcttcaagcatctcgacaa
ctttttgcagggaaaacgcttccacaaccagcaggatgcagaaaatgctttccaagagttcgtcgaatcc
cgaagcacggatttttacgctacaggaataaacaaacttatttctcgttggcaaaaatgtgttgattgta
atggttcctattttgattaataaagatgtgtttgagcctagttataatgatttaaaattcacggtccaaa
accgcaattacttttgcaccaacctaa
>HSMAR2   Human mariner - a consensus.
cgaggggtcttcaaaaagttcatggaaaatgcgtattatgaaaaaactatgcatggatttcaaaaatttt
ttgcaccaaaataaactcgtactaacttgttataacatgtctgaacaggatctagtttgaggcactaaga
aggataagacatcagtttgaaaagagcccctatcagagcaacatgaattctgctaaaattgaagcaagaa
caaacatcaaatttatggtgaagcttgggtggaagaatggtgaaatcactgatgctttacgaaaagttta
tggggacaatgccccaaagaaatcagcagtttacaaatggataactcgttttaagaagggacgagacgat
gttgaagatgaagcccgcagcggcagaccatccacatcaatttgtgaggaaaaaattaatcttgttcgtg
ccctaattgaagaggaccgacgattaacagcagaaacaatagccaacaccacggacatctcaattggttc
agcttacacaattctgactgaaaaattaaagttgagcaaactttccactcgatgggtgccaaaaccgttg
cgcccagatcagctgcagacaagagcagagctttcaatggaaattttaaacaagtgggatcaagatcctg
aagcatttcttcgaagaattgtaacaggagatgaaacgtggctttaccagtacgatcctgaagacaaagc
acaatcaaagcaatggctaccaagaggtggaagtggtccagtcaaagcaaaagcggactggtcaagagca
aaggtcatggcaacagttttttgggatgctcaaggcattttgcttgttgactttctggagggccaaagaa
cgataacatctgcttattatgagagtgttttgagaaagttagccaaagctttagcagaaaaacgcccggg
aaagcttcaccagagagtccttctccaccacgacaatgctcctgctcattcctctcatcaaacaagggca
attttgcgagagtttcgatgggaaatcattaggcatccaccttacagtcctgatttggctccttctgact
tctttttgtttcctaatcttaaaaaatctttaaagggcacccatttttcttcagttaataatgtaaaaaa
gactgcattgacatggttaaattcccaggaccctcagttctttagggatggactaaatggctggtatcat
cgcttacaaaagtgtcttgaacttgatggagcttatgttgagaaataaagtttatatttttaatttttat
cttttaattccattttccacgaactttttgaagtcccctcg
>L1   Primate L1 consensus.
[encoded data, 5467 characters]
atgctcatcatca
>L1M3_5   L1M3/4 LINE1 repetitive element 5' end - a consensus.
agagcaagatggcagaacagaatgctcnaacaattgcccccatyctryyccnccacaggaacaccaaatt
gaacaactatctacacaaaawagcaccttcataagaaccaaaaatcanntaagcgatcacagtacctggt
tttaacttcatatnactgaaagaggcactgaagagggtaggaaagacagtcttgaatcgccaacgccgcc
cctcccccatcccccggcagtggccgcacggcacggagagagaatccgcgcacttgggngagggagagcg
cagcgattgtgggactttgcgttggaantcagtgctgccctgtcanagcggaaagcaacancgggcagaa
ctcagccggcgctcatagagggancatttagaccagccctagncagaggggaatcacccatcccagcggt
cggaacctaagttccggcaagcctcgccaccgtgggctaaagtgcnntagggtcctaaataaacttgaaa
ggcagtctaggccacaaggactgcaattcctgggcaagtcctggtgctgtgccgagctaagagtcagtgg
acttagggggcacacgacctagtgagacacyagccggggtggccaagggantgcttgcgccacccyctcc
cycaacnccaggcagcacaactcgcagctccgggagagactccttccctccgcttnaggagaggagaggg
aagagtaaagaggactttntcttgcaantcggataccagctcagccatagtaggatagggcaccgagcag
agtnnwgaggycccnattctaggccctagctcccggatgacatttctaaacacaccctgggccagaaggg
aanctgctgccttaaagggaagganccagtcctagcaggantcatcacctgctgactaaagagcccttgg
gccctgaataatcagcagcgatacccaggttagyactcgccgtaggccttgggtgagantctgagacgtg
ctggnttcaggtgtgacncagcacattcccagctgtggtggctacggggagagactccttctgcttgaga
aaaggagagggaanagtaaaggggactttgtcttgcagcttagntaccagcttggccacagtggagtaga
gcaccaagcgggctcttagggtccccgattccaggccttggctgttggatggcatttctggacctgccct
gggccagaggagagcccactgccctgaagggagagtctcaggcctggcagcattcaccgcaagctgacag
aagagtccttgggctttaagtgaacattkgcgrtagycaggcagtacttnctgtgggcctgcggcggtgg
tngccatagggagagnctcctctgcttgtngaaaggggagggaagagtgggaagaactttgtcttgtggc
ttgagtgccagctcagccgcagtagaacagagcaccgggtagatttctaaggtttccgactccaggccct
ggctcctggatagcatcyctggacgtgcccggggccagagagaactcaccaccctgaagggaaggataca
agnctggctggctttaccacctgctgattgtagagtcccggggccttgagcgaacataagcagcggccag
gcagtggttactgcgggccttgggcgagacccagtgctgtgctggcttcaggtctgaccyagtacagtcy
cagtgrtggtggccacaggggtgcttgtgtcacccctccyccagctccaggcagctcagcacagagagag
agacngagtttgtttgrgggaaagtaarggaagagaacaagagtctctgcctggtaatccagrgaattct
tccagatcttatccaagaccacnaaggcagtacctctacgagtctgcaagagccacagtattactgggct
tggggtgccccctaatgcagatacggccgcagtgacaaaaaacttagatcacaacacycaagtcccttca
aatacctggaaagcyttcccaagaaggacgggtacaaacaagcccagactgtgaagactacaataaatac
ctaactcttcaatgcccagacacagacaaacatctacaagcatcaacaccatccaggaaaacatgacctc
accaaatgaactaaataaggcaccagggaccaatcccggagaracagagatatgtgacctttcagacaga
gaattcaaaatagctgttttgaggaaactcaangaaattcaagataacacagasaaggaattcagaatyc
tatcagataaatttaacaaagagattgaaataattaaaaagaatcaagcagaaattctggagctgaaaaa
tgcaattgacatactgaagaatgcatcagagtytcttaacagcagaattgatcargcagaagaaagaatt
agtgagcttgaagacaggctatttgaaaatacgcngycagaggagacaaaagaaaaaagaaaanaatgaa
gcatgcctacaagatctagaaaatagcctcaaaagggcaaatctaagagttagtgaccttaaanaggagg
tagagagagagataggggtraaagtttattcaaagcnataataacagagaatgtcccaaacctagagaaa
gatatcaatattcaagtaaaagaagnttatagaataccaagcanatttaacncaaagaagactacctcaa
gacatttawtaatcaaactcccaaaggtcaaggataaagaaaggatcctaaaagcagcaagagaaaagaa
acaaataacatacaatggagcnccgatatagtctggcagcagacttntcggcggaaancttacaggccag
gagagagcggcatgacatatttaaagtgctgaagaaaaaaaaaaaaactttnatcctagantagcgtntc
cagngaaaatatccttcaaacatgaargagaaataaagactttcccagacaaacaaaagctgagggattt
cntcaacaccagacctgtcctacaagaaatgctanagngaattcttcaatgtgaaagaaaaggacgttaa
tgannaataanaaatyatctgnaggtrcaaaactcactgataatagtgcgcagaaaaacanaatattata
acantgtaattatggtgtataaactactcttragtagaaagactaaaagatgaaccaatcaaaaatanta
actanaacaacttttcaagacatagacagtacnntaagatanaaatagaaacaacaaaaagtttaaaaat
tggnggacgaagttaaaatgtagagtttttattagttttcttnttgttnnttgrtttttttnaanttatg
taatnagtgttattatcagtttaaaatataggatattatttgcaagcctcatggtaacctcaaatcnaaa
aacatacaacggatacacaaaaataaaaagcaagaaattaaaacatatcaccagagaaaatcaccttcac
taaaaggaagacaggaaggaaggaaagaanaaagagaagaccacaaaacaaccagaaaacaaataasaaa
atggcaggagnaagtcattacttatcaataataacattgaatgtaaatggactaaactctccaatcaaaa
gacatagagtggctgaatggatataaaaataagacccaatgatcggtcgcctanawgwaacacacttcac
ctataaagacacakatagactgaaaataaagggatgaaaaaagatatttcatgcnaatggaaaccaaaaa
agagnaggagtagctatacttayatcaganaaaatatatttcaagacgaaaactataagaagagacaaag
aaggtcactatataatgataaaggag
>L1MA10   3'-end of L1 repeat (subfamily L1MA10) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctgggggragggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
ataatactggattgtacacttaaaawttgttaaaagrgtagatctcatgttaagtgttcttatcgcacaa
caaaaaaatggggaacttttggrrgtgatggatatgttcattatcttgattgtggtgatggtwtcacggg
tgtntacatatgtcaaaactcatcaaattgtacacwttaaatatatgcagtttttagtgtataattatac
ctcaacaaagctgttttaa
>L1MB3   3'-end of L1 repeat (subfamily L1MB3) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaacgccactgaactgtacgcttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaaaaaaa
>L1MB7   3'-end of L1 repeat (subfamily L1MB7) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctataattaaaaagacagacaataacaagtrttggcgaggatgtggagaaattrgaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactttggaaaayagtttggcagttcctcaaaaagttaaa
catagaattaccatatgacccagcaattcyactcctaggtatatacccaagagaawtgaaaacatatgtc
cacacaaaaacttgtacacgaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatccatacaatggaatattattcagccat
aaaaaggaatgaagtactgatacatgctacaacatggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggycacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctgggggraaggggaaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctaaaattagatagtggtgatggttgcacaactytgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaarctataa
>L1MC2   3'-end of L1 repeat (subfamily L1MC2) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatccaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catactcttaccatatgatccagcaatcayactccttggtatttacccaaatgaattgaaaacttatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaagaaatgaactatcgagacatgaaaagacatggaggaaccttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaactatatgacattctgaaaaaggnaaaactatgg
agacaagtaaaaagatcagwgattnctagagkgastrggarrgggagggaagaataggtggagcncaggg
gatttttagggcagcgaaactattctgtatgatactataatggtggatacatgacattatacatttgtca
aaayccatagaactgtacaayacaaagagtgaaccctaatgtaaactatggactttagttaataataatg
tatcaatgttggttcatcaattgtaacaaatgtaccacattaatgcaagatgttaataatagggtaaact
rttgtgtgggggagggagtatatgggaactctctgtactttctgctcaatttttctgtaaacctaaaact
gytctaaaaaataaagtctattaataa
>L1MC3   3'-end of L1 repeat (subfamily L1MC3) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgawacyactatatacgt
atannaraattaaacaaataagtaaatgtatkgtagatgatgggagccaggtttctcactgtcggagtga
ggagttacagataagcaaagggaggagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccgctgagagggccta
gaagcaacgacaccccagtagcaatgagcacacctagcacccagatcttggtttctaataccattctcca
ataaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatatacaagatgag
cctggaacatcttgcartgccagaaaataaggaagtgctcaaaaacacaatgatrggggtatgtcaaagg
gacacagragccaactgaaagagctcccaatggccaaagctggaacaatttgagcaacaaaataaattat
rgtagtattggattataacycaaagtataaaataaatatccatgagtccatactgatataaatgaatgat
taaataaataaataaattgagaagataaataagtctctnntgcagaagaatttcaaataatttatgtaga
tarcctnccctcaaggaagtggagcgtaactccccactccttaagtgtgggatggatatagtgacttcct
tccagaaagcatagtataggacggaaaaaaaagtaaatttacwgtagagaaacctgacaaacactacctt
agccaggtaatcaaagttagcatcaacaattgtaagtcatgttgatagyatatacccttgatatgatgtg
ataagaatggcacttcacctccgtggtcttcctcccaaaaacccataaccccagtctaatcatragaaaa
atatcagacaaattccaactgagggacattctacaaaatacctgaccagtactcctcaaaactgtcaagg
tcatcaaaaacaaggaaagtctgagaaactgtcacagccaagaggagcctaaggagacatgacaactaaa
tgtaatgtggtatcctggatgggatcctggaacagaaaaaggacattaggtaaaaactaaggaaatctga
ataaagtatggactttagttaataataatgtatcaatattggtttattagttgtgacaaatgtaccatan
taatgtaagatgttaayaataggggaaactggatgtggggtatatgggaactctctgtactatttttgca
actttcctgtaaatctaaaactatttcaaaataaaat
>L1MC4   3'-end of L1 repeat (subfamily L1MC4) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgaaactattttatatgt
attgtaggattgagcaaataagtaaacgcattgaagataatgggagccaggtttctcactgtcggagaag
ggagttacaaatatggaatgggggaagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccactgagagggccta
gaagcaatgacaccccagtagcaatgagcacacctagcgcccagatcttggtttctaaataccattctcc
actaaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatgtacaagatga
gcctggaacatcttgctrtgccagaaaataaggaagtgctcaaaaaatgatrggggtatgtcaaaaggac
acagragccagcttgaaggggctcccactggccaaatctgggacaatttgagcatcaaaataaataacgg
tagtaatggattataactcattgaataaaataaatatccatgagttcatactaatataaataaatgaata
aaagaaataaataaataagaragaaaggaaagytcttcttacagtagaatgccaactaayaaatgtagaa
ggaataaaataatagaaaaatcaccatttggcaaayaccacagtaataantgtttcaggcaagaaccatc
gatagatgctaaaattagtgggcgaaartttgatgagaaacgggatatttgcatagtctcaaagtatctc
yccacaagatatttattaattayaaagggaaaaatagtractttacagtagagaaacctggcagacacca
ccttaaccaagtgatcaaagttancatcaccaataatgagacaaattgacatcatgcgcytcctgatgtg
atgcgccgagaaggacacaacatcacttctgtgatattcytgccaaaaatgcataacctgaatctaatca
tragaaaatatcagacaaacccaaattgagggacattctacaaaataactggcctgtactcttcaaaaat
gtcaaggtcatgaaagacaaggaaagactgaggaactgttycagattgacggaagactagagacatgaca
actaaatgcaacgcgtgatcctggattggatcctggatcgagaaacggtgggagtttktayctataaagg
acattattgggacaattggcgaaatttgaataaggtctgtagattagataatagtattgtatcaatgtta
atttcctgattttgataattgtactgtggttatgtaagagaatgtccttgtttttaggaaatacacactg
aagtatttaggggtaaarggncatsatgtctgcaacttactctcaaatggttcagraaaaaaaatnnata
tayataaryagagaatgataaagcaaatgcggcaaaatgttaacaattggtgaatctgggtgaagggtat
acgggwgttctttgtactattcttgcaacttttctgtaagtttgaaattatttcaaaataaaaa
>L1MD1   3'-end of L1 repeat (subfamily L1MD1) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatactttggcagtttcttataaagctaaa
catacamttaccatatgactcagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccataccatggaatactactcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctccagaaaattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttacataacattcttgaaatgacaaaattwtag
arwtgragarcagattcctggttgccaggggttagggacgggggtgggggtggagggaggtgggcatsst
ggagttccctgtggtgatggaaatgttctgtatcttcactgtatcaatgtcaatatcctggttgtgatay
tgtactatagttttgtaagatgttaccattgggggaagctggatgaagggtacacgggatccctctgtat
tatttcttacaattgtntgtgagtgtgtaattatttcaaaataaaaagtttaatttaaaaa
>L1MD2   3'-end of L1 repeat (subfamily L1MD2) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatagtttggcagtttcttataaagttaaa
catacamttaccatatgacccagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccatacmatggaatactattcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctcaagaacattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttatatarcattcttgaaacgacaaaactatag
agatggagaacagattagtgrttgccaggkgttagggatrcaggraggaggtggatgtgrytataaarrg
gtagcatgagrgaatytttatggtgatggaacwgttctgtatcttgaytgtggtgrtggttacacgaatn
tatacatgtgataaaattgcatagaactaaatayryryryrataagtacaagtaaaactggcgaaatctg
aataagatwnatggrttgtaycaatgtcaatwtcctggttktgatattgtaytatagttttccaagatgt
taccattgggggaagctaggtgaagaacacacgggatcccyctgtattatttcttacaattgtntgtgag
tktayaattatttcaaaataaaaagtttaatttaaaaa
>L1ME2   3'-end of L1 repeat (subfamily L1ME2) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctcaaaaagttaaa
cacgcacctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacttgtacaagaatgttcatagcagctttattcataatagccmmaaagtggaaacaaccca
aatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatattactcagcaat
aaaaaggaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgtatgattccatttatatraaattcwagaacaggcaaaactaatc
tataatgntagaaatcagaatagtggttgcctctggkgagggtraatgactggraagggrcatgagggaa
ttttctggggtgatggaaatgttctatatcttgatcggggtggtggttacacgagtgtatacatttgtca
aaactcatcgaactgtacacttaaaatctgtgcattttactgtatgtaaattatayctcaattttaaaaa
a
>L1ME3A   3'-end of L1 repeat (subfamily L1ME3a) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctacaaaagctaaa
cacgcgcctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacatgtacaagaatgttcatagcagcattgttcataatagccaaaaagtggaaacaaccca
gatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatactactcagcaat
aaaaatgaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgnntgattctatttgcataaaatacaaaaccaggcaaaactaatc
aatgntgttagaagtcaggatagtggttgttctgggaatagtaatgactgtaaggrarcatgagagggct
ttctggggtgctggtaatgttctgtttcttgatctgggtgctggttacacggctgtgttcartttgtgaa
aattcatyaagctgtacacttatgatwtatgcayttttatgtatgtatattatayytcaataaaaaaaa
>L1PA15_5   Primate L1PA15_5 repetitive element - a consensus.
aagatggctgactagatgcagccaggwggaacakctcccactgagggaccaggacatcaggaagactggc
acactcctarcagatcttcagagggaaggcaytgagagtggacggagggaagacacagawgctgggctga
agggggaggaagctgggaaccctgcacggggctaccrmgcaccaggactcgttcctggcccccagtgact
cctggggaakgggtgagttgaacaggcaaggagyracccactctcaccatggacctctggaatcctagca
gsaggagaccccwcgaccmccayrgacacttgagytggcagggagagctgcttagagaagtggtaggggc
agramtccagcctgtgtggagcccagagggtttggtgcaggarcatctgtagtggagcacggccagggay
gcccatcccccaaggctcamcatgctcccataggagactttagcccttagggkaactgtyrgacctgaac
wctgcagggtrgtcttgcccatgagacrgggccagtctgacctgagcaccccttggtctgctggcctctc
cyggggccccagcctggccacacctgcttgcagtgcagcctccaggtgcctcctgggggcccacatcata
gcttctgcactggcagaccatgcctgaccagcagagagctccagcagggcggcccccatggmcacgcacc
agcctgcatgctccctccccacactgcagcttccccatggygctttgcctgcacacattnrcccatggca
actccccacatcactttgctggcacgtgtctgcatrggtggrttttgctttccttgccctgccagygtac
atgtgygagtgcaccctgctgtgccactgctgctggygggagtgcaccccccacccattctcccatacct
sctgactgccattgcagatggagccttggtgggcacagagccagccagccccacccccaccagyrcccyr
cccytgyrctaacactgcccctggagtgaaaccaggcacaagaacagcggatyctccccyaccctgagcg
accactcctgcttgtggggcacagagaaggcacacagacctcacmcagwyctgwgccgaccagcgcttcg
ccccgtgctaacaccaccwccggtgcaancgcawgcacagwcgccggcgrcggcccctcgccgctctgag
ccgttctgccwctgctgccgctgtgaatgcscacagggaggcaggcacccccgcacccgctagtaccccc
nacccccacctaaggcgttgagcgygcaccctgccgtgccgccgctgctgctggcacacgcaagcaagca
tagatcctgctgccaccgccccaaaaaagcactttggctggcaccacccatcggagtgttgtggccagtg
gaccgggaacacctcggncccyccagcgcagcaggttcctaacctcgaggggccagagaacaaagctggg
gacccgrtaccagccccccagagttagagcacacagcccaggagtgctgagctgagccttggncccctaa
aatcttccagaaacgaanccagtcaactgaacccaccttataccacaatcaaacccccaagggcatcaaa
gaagatraaagaaaaaaaaaycatccaaaggacagcaacttcaaagattgaaggaacatcagcccacama
gatgagaaagaaccagtgcaagaactctgrcaactcaaaaagccagartgycttctttcctscaaatgac
tgcaytasttcyycagcaakggttcktaactaggctgaaatggctgaaatgncagaaatggaattcagaa
tatggataggaatgaagatcatcaagattcaggagaamgtcgaaacccaatccaaggaakctaaggaatc
acaataaaacgatayaggagctgamagacaaaatggccaktwtaraaaagaaccwaactgatytgataga
gctgaaaaacwcgctacgagaatttcataata
>LSAU   Satellite repeat.
cgtcggaaggtgttgggagagcctcagccggaatttcgtggacggacaagggcacagagagcccagcggg
ctcccttgcatgtcagccggggtgcacaatgagcacaggtctagccaggaggccggcaaagagagctaga
ggtctgcgttccgccgccaggctctccatggtggcagctgggaggatgcaggggcatgggcgggccggcg
acgttgcacggagacgcagaggaggtgagtcactgggggggtgtcaggcctggacgctgtgcgggcccag
tgttttcgcgggaagagggtctccacccagcccaggggaggagcgcattttcagggggttggtggtgagg
ctggggatggtgtgctcaggcaggggtgtgatggaggaaaggcaggagagctctgccctggtgctcccgc
tgcccaggcggctaacttgcaaacccgcgcatgtgcagaggcagctcacctgtgggtacctgggccggct
ctgggatc
>LTR1   LTR from human endogenous retrovirus-like sequence (HUERS-P2).
tgatacggacaggrgrgggaartgctgggtagaggagggcgggktccctggctagggctccaccctcggg
cctgtgcccacggacctaggtgaggacaggcatttytgttttcccgcccaaatgttgcatttyccaagac
cacccytggcctgccacgccccccatcctgtgcctataaaaacccgagaccytagcrggcasasacacaa
gcggctggacgtcaagaggaacacaccggcggaagaacacactgacggtggcgccggcaggccatcgact
ggcggaacsattcgganttcggcaggggcggycggaggacagctggarracagccaggccgctgagcggc
cggactccaggggaaraycaccttcccactccatcycccttccggctcccccatctgctgagagctactt
ccactcaataaaaccttgcactcattctccaagcccacgtgtgatccgattcttccggtacatcaaggca
agaaaccccgggatacagaaagccctctgtccttgcgacaaggcagagggtctaactgagctggttaaca
caagccgcctatagatggcaaactaaaagagcaccctgtaacacacgcccactggggcttcaggagctgt
aaacattcacccctagacactgccgtggggtcggagccccacagcctgcccgtctgtatgctcccctaga
ggtttgagcagcggggcactgaagaagcgagccacacccccatcgcacgccctgtgagggggacaaggga
acctttcccatttca
>LTR15   LTR from a human endogenous retrovirus HSRIRT.
tggaacaggaattaaaagaaattaaagaatgcataagcaaaaactcaattgtatgtagggaaacccaatt
cctcctgaggaagagaaagaggtggagtcctttaaaaattcactgcctgtttttccgtctgtagctagtg
agccttatctctccctttcccaggcattgtgaagaccctgtttctccagctgtgcagctgcatggtcact
agacagataaactcaagttgtaaaacatgtttttccttgaaaagtaagaaatgatgtaatacatgtctca
actgaataactgtctttgtttctcacttctgtagtaagcttccccctgcacagatctcccctctcacccc
atgaaatgcttaaaaggtaacctgactctttgttcagggctcagtcctttggatgttaatctgactgggc
tggtgcacctaaataatamatayatcctcctcaaccccatcggtctctctgattcctaaatcatccccaa
aca
>LTR8   LTR from human endogenous retrovirus-like sequence (HUERS-P3).
tgaaaccgcctttgcaaaattatgactgagacagtgaaagagatctaacttwactgactccatcttgctt
ctaacctccaagctgtccttgttcattcctgggcgtaggctgaactaactttgggagaaacttagtttat
agtttatagtttaaacaaagacggtaacagccctttcccaaagcagacctccttcttgcctggggactag
attgcctttgtaggactaacattagccgcaagattagaaattatggtttaggagtcatgcagctggaggc
tacaagattctgaccctccctaaactgctcctaagatcagtgcttgagatattttgcagaccctgcgctt
gatggatcagctggcaccacccagatcaataaactggctcatctgatcttgtggcccccacccaggaact
gactcagcgcaagaagacagctycaactycctatgatttcatcyctgaccaatcagcactcctggctcac
tggcttcccccnacccaccaagttatccttaaaaactctgmtccctgaatgctcagggagactgatttga
gtaataataaaactccggtctcccgcacagccggctctgcgtgaattactctttctctattgcaattccc
ctgtcttgatgaatcggctctgtctaggcagcgggcaaggtgaacccmttgggtggttaca
>LTR9   LTR from human endogenous retrovirus-like sequence (HUERS-P3, HuRRS-P).
tgatacaggagttaaaaagaaattatttaggcagatagtgagggtaagggagtcctcggtaaggttttcc
ttttaacgaaaagcagcccccaaatcattttcttttctaacaaagagcagcctgtaaaatcgagctgcag
acatagayaagcaagctggaagcttgcacgggtgaatgccggcagctgtgccaataggaaarggctacct
gggggcyaggcatgttcaanatggnggctccatcttcccttctctttgtcagccacgtgtacagtaagga
gcagacaacatggcgccggccargtagagagcccatttgcataataaaagattagggtggggcggccagc
cttccccgcgcgctatgyaaacgkcacacctggtccaaccaatctntgngccctatgtaaatcagacacc
gcctcctcaagcycgtctataaaatccgntgcatytgccaccagccggncttttccactcgggnacccct
ctctctnnagagagagagagctgttctcctttctcttttcttttgcctattaaacctccgctcctaaact
cactccttgtgtgtccgcgtccttratttycttggcgtgagacgacgaacctcgggtatttaccccagac
aacgangccgcttca
>MER31   internal sequence belongs to the MER4I group.
tggtgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaagccc
cgaccttgggcyctgtccttggcctgcwnagtccagttttagcaagaatcctgctaagtcagtttagaga
gaatcccccaccctcgatatctgatcaggttcctcatcctccgccatcccccaggcgatgtctgatcacc
ctggcctgccttcagcaagaatcctgttaggtcagtttagcmagaatccccctacccctgatgtytcctc
ttagtaattttccatccactgacccccaccctgctccttggctataaatccccacttgtccttgctgtat
tcggagttgagcccaatctctctcccctactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtctgccttaccgtgctttaacaagtgtcgttgaataattttctctgaca
>MER34   a consensus.
tawtgaaggagatcagaatatgccaccccaaaatatgccactttggcataaggattattttgagctaaag
gcacttgagaaacagcagrtgcaagaagagcactctgaccttcctcttttcttcctgaaagcaggagata
aaactcccatgtgaaagacgttctctctataccaggaggaaggaaacattcttatcgtcagagacgggga
gtcgaggccgagggaaatctgtacgaacaaaccttgttaaactaacyctyatcttcctagtcacttctcc
acgatgaaccgccctagcccaaacccctttgtcttgtcacgttttcacaatttactactctttgtccaac
ctagtatawaagcgttcgactctaaccgcttctttgggtcttcatttccttatgagggctcccatgtaca
tgtaaaacatacttaaataaatttgtatgcttttctcctgttaatctgtcttatgtcagtttaattatcg
ggcccagccggaaactctaagagggtagaggwaaaatttttccttcyctnccatgg
>MER41A   internal sequence belongs to the MER4I group; a subfamily.
tgtcagagacgtgtgaaccagagcaactccatcttgaataggagctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctacactcccaccagcaccatgacagtttacaaatgc
catggcaacgtcaggaagttaccctatatggtctaaaaaggggaggcatgaataatccaccccttgttta
gcatatcatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctgtctatggagta
gccattcttttattcctttactttcttaataaacttgctttcactttactctrtggactcgccctgaatt
ctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttgtaaca
>MER41B   internal sequence belongs to the MER4I group; subfamily MER41B.
tgtcagaggcgtttgaaccagagcaactccatcttgaataggcgctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctcattatatgytaattataatgcattagcatgctaa
aagacactcccaccagcaccatgacagtttacaaatgccatggcaacgtcaggaagttaccctatatggt
ctaaaaaggggaggaaccctcagttccgggaattgcccgcccctttcctkgaaaaytcatgaataatcca
ccccttgtttagcatataatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctg
tctatggagtagccattcttttattcctttactttcttaataaacttgctttcactttactctrtggact
cgccctgaattctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttg
taaca
>MER41C   internal sequence belongs to the MER4I group; subfamily MER41C.
tgtcagaggcgttcgaaccagagcgactccatcttgaatgagggctaggaaaatgaggctgagmcttgct
gggctgcattcccagraagtcaggcattcctaacctctagatgtttacggttaagggaacagattaataa
tgtttactaaacagacccagacttgggagtgtccagatatcccgatatctkgagaacagaggcattccta
atttckctttaaagataataatattgattcttgcaaaakatagtaattaagcaaagatkrrcaatccttt
gtcacaagcccttgtagcagagcacatctcccccgtaatgttctttggctttgttatcctatatataaac
aagcattgtacctagggtggacgcsttcctcctsttgctttcgggaacgccctgctctgtctatggagta
gccgttctttcactmctttactttcttaataaacttgctttyactttacactgtggaatcaccctgaatt
ctttcttgcatgagatccaagaaccctctcttggcggttggatcaggacccctttcttgtaaca
>MER50   Primate MER50 repetitive element - a consensus.
tgttagagtaggtagctaggcagrcatgagcagggcaggagagggcnccccccacacacaccacgaatgt
cgggtgaccatcaggtgatggtcaggcggttgttaaactgtctctctaaaataataattggtcacagcca
gcgccagggaaargcagtctcctaatagatagaaaacacctgaarctggtgatcagcagcttcccgataa
gatctcaggagttgggcgagtgagctcaagcatgcgcactaagaggcaaaatgrcggagtttaaccggca
tatgaccttcctctaggaacactccaatggtaagggaaraatgcctcaartgagcatgtgcacaactcca
gtaaacacactgtgcatgcggcccytcccaagtgctggcaggccactgcgcacgcggacagcccacccca
aggaaaaatcaagggaggagraacgcaaaccccggaagcatgccgatgtataaaaccccaagtcaaaggt
caaaccgcgcacttggtctctcaagtcgcccgcttggccctcttccaagtgtacttcgcttcctttcgtt
cctgctctaaaactttttaataaacttycactcctgctctaaaacttgcctcggtctctttttctgcctt
atgcccctcagtcgaattctttcttctgaggaggcaagaattgaggttgctgcagacctgtacggattcg
ccgctggtaactcagataccttccaccggtaaca
>MER63A   Primate MER63A repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggarngaaaaaaccctgatttgtagcgt
ttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccaacgtgatgtcactgaat
gsggagttgggaaaagatatacacaatcgactctcgtgagccgatacgagccagctccagcacaccactg
g
>MER63B   Primate MER63B repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaaagaaaaaagccctgatttgtagcg
tttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccaacgtgatgtcactgaa
tgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagatacaatagac
gtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatgagttttgagt
atttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttctttgttttt
aatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccgatacgagcc
agctccagcacaccactgg
>MER63C   MER63C repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaggwaatgymtkgatttgtgtattca
catatataagtttattataaattttactgatataaaggacgtrtagcacacaatttacaaataacaataa
aatatacaatattctttattgtaaattccatatagccagttgattctcacagaatgctttcgttgatttt
tgcccaaactcttgtatccgtagccgaactatgtttgtaattgacgaacaagtgtagttcnaacatgaat
gttggttgatattttcgtttatgttaatgagtaagatgaaagtgaaacaacgaagacgtatgtcagaact
tcactcatttgtcaatgatgtgagtgacttctttgctgaatcggatggtagttttcaaacattagaagaa
tattttctcaatttttggtgctattcgcaatgtaacagctacagacatgacacacttttaagtttaatct
gcatcattaacattttctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctga
tttgtagcgtttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccagcgtgat
gtcactgaatgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagat
acaatagacgtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatga
gttttgagtatttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttc
tttgtttttaatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccg
atacgagccagctccagcacaccactgg
>MER65A   internal sequence MER65I belongs to the MER4I-group; subfamily MER65A.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER65B   internal sequence MER65I belongs to the MER4I-group; subfamily MER65B.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacaaggacatttgcctgacaactgt
ctcacraacctagctactgcaagagcctactgtaactctaagattacaaatcctacctagcaactgccga
cactcgccaatcagagctcgccagctcttstaagacgctgctagcgccaatgaactttctttcaaaacaa
yttgtgtaaccttctctttccttaataaaaccctaacatttttctttgttctctggacataccgaaggcc
acctggtctgtgtgtatgccccaaattgcaattctgttcttcacatgttattcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER66A   internal sequence belongs to the MER4I-group; subfamily MER66A.
tgagataggaggtgggactcgactccggaggcggggcttgaactccagaccagattgaagactagctgaa
acagggccagggcaaaagcacctctccataagacacacccaccggtgccawgtgagtttaccattgccat
ggtaacagccagaagttactgcccctttccatggcaatgacccggaagttaccaccccttttctagaaat
ttctgaataacctgctccttaatttgcatgtagttaaaagtgggtataaatatgactgcagaactgcctc
tgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctctgctgctg
ctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctttcctgggc
gaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER66B   internal sequence belongs to the MER4I-group; subfamily MER66B.
tgaggtaggaggtgggactcgactccggaggcggggcttgaacaccagaccaaattgaagactagctgaa
acagggccagggcaaaagcagctttccataagacccacccaccggtgccawgtgagtttaccattgccat
ggcaacagccagaagttactgcccctttccatggcaatgacccgatgacccaaaagttaccacccctttt
ctagaaatttctgcataaaccgccccttaatttgcatgtagttaaaagtgggtataaatatgactgcaga
actgcctctgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctc
tgctgctgctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctt
tcctgggcgaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER67A   internal sequence belongs to the MER4I-group; subfamily MER67A.
tgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcctcaa
cctcggcctataaagacttgaacaaacactaacatagtttctaatagctcaaggccacatccctaggatg
accctagcccccccttaaagtgcctgcctgagaaaactcaaggctgccaaaataatttactgtttgttcc
agccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaacttcgataag
cgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcacttccc
tgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcacc
tctgcacaaatcgaagctgagctcagttcacgctggactcttttccctactgcaatagtatattactgat
taaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67B   internal sequence belongs to the MER4I-group; subfamily MER67B.
tgagaactgcagaactctcggcacagaacaactccatccaaacccctgcactaagagacttgaccaaact
ctagcatggcttctagcagcataaggccgcgtccctaggatgaccccagcccccccttaaagtgcctgcc
tgagaaagctcaacgctgccaggagaatttactgtttgttctagccaacacctgatgataggcccctgat
ctccctttcttagagcatttactaaaaagggcttacaattgtgaatccttcctctgtccctttgagatat
gtatgtatctcctacaactcaggagtgtctttctcaaggacctgagagccattcctttgaaatgtaatca
tcgagaaggatagggcctctgtctcccagtctctgtgggaggatagaatcctaactttgataancgccag
ctagcagacacagctggcctaatcacattgacactgaccagccctttgtaatttttcacttccctgactc
tgctgagcccccacgtnccctctccccnctccctcattctccctttaaaacgcccagtcacctctgcaca
aattggaatggarctcagctctttcccctactgccagtagttactgaataaaatccgttttcaccgcttt
aactagtgtccggctttgtttatctttgaca
>MER67C   internal sequence belongs to the MER4I-group; subfamily MER67C.
tgtaagggcaaatacaaattaaaaataagaggcttnaattctccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgaa
atgtatgtaaatctttttaaaagctaaataagcctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaawcatcaaggaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaacttcagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
atgagaagtttatttttcctttggataaagccaattagctaacacagatggccaccccaattaccaggtg
aatttaggatgaactatgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtstt
tgcaatctcttagcagattgcctgtgatgcgcatcacattctggtttaatgcttattcaataataaaacg
tgttttctttctcttctacctttgtggagaggttttctgggttgggagragattttgtttttaattatat
ttccccaaca
>MER68A   MER68 LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcatctgggaacttggatttcgggagggttcccaccattcccwkaactgataagagtggct
cactgtgcctaaactgtttgtgcaaacaatatggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacgtgctaggcagagggtgcctacgtgaccagcccccartaaaaaccctgggcactgagt
ctctaatgagcttccctggtagacaacatttcacatgtgttgtcacaactcgttgctgggggaattaagc
gtgtcctgtgtgactccactgggagaggactcttggaagcttgcgcctggtttcctccggacttcgcccc
atgcgccttttccctttgctgattttgctttgtatcctttcgctgtaataaatcatagccgtgagtatga
ctatatgctgagtcctgtgagtcctcctagcgaatcaccgaacctgggggtggtcttgggaacccctaac
aca
>MER68B   Primate MER68B LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcgtctgggaacttggcttttgagagggtccccaccgttcccttaactgataagagtggct
cactgtgcctagactgtttgtgcaaacaatgtggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacatgctaggcagagkgtgcctacgtgaccagcccccaataaaaaccttgggcgctgagt
ctctaatgggcttccctggcagaaacattgcacacacgttgctgcattttattgctgagggaagtaagtg
ygttctgtgtgacycctctgggagaggacmywkggaagcctgcgcatggattcctccagactccgcctga
tgtgtcttttccctttgctgatcttgccgtgtatccttacnrtgtcgctgtaataaatcttagccatgag
tataactgtatgctgagtcccgtgagtccttctagcgaatcaccgaacgtgggggtggtcttgggaaccc
ctaacaca
>MER69A   MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcataggccccttc
caaggccctgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgt
ataagcttcaggccccacaaaacctggatctgcccctgg
>MER69B   MER69 repetitive element - a consensus.
cagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccacaattggttaagactgctgtctctttccactccgacttcccctccatcacacttcccc
tcatgtcgggtggtattggagtggccgtgggcatttttgggatctggctaagggaaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtataggaatggcttccaggaayattcctactgcccactgtgccgactcacccagc
gtcgtgacmtgaggcacaggaccggagrtcgtatcgcgatatgaacgtgtcctacggcacctggcaccgg
aagtatgcgggtagtggaggagaaacaaggtttgaaatgtacagagccagaagctagtctgtggaaaatt
cttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgatgcctagycagagcaga
agttctctcctgtcagaaatatactcgataatgcagcgtatacaattataaatgcamcatgcatttattt
gcatttttggaagggaatcatgcgaaatagaatttatcagaantccttgtttgtagggcacagatctrta
gcagtactacaaacagtgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgctgatatga
catgaaatwctgacgttaacgaagataacasttcacttctaatttaccatgacaaaaaagacatcagtga
caaactggttactgagtgtcattaattctaagagyatttaagattagtcactgcacaagaaaacttgaaa
tgccctgaaatcttacagctcatatatgaaagaaacttgataggggtttccccaaatttgacaacaattc
taaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaacttttctaaactatcaataat
aaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctatagaaaat
attacaaaatcgttgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaaaartat
tatagaagtgtgtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatgtttgtg
gtatttgtcaactttttaaaatttgtaatttgttgcgatttcttttctcattctaaataaatattcactt
ttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgtataagct
tcaggccccacaaaacctggatctgcccctg
>MER70A   Primate MER70a repetitive element - a consensus.
aagcagattcgctaattaccagtcccaagagaagactcctactgcgtggagaatagcgaagatcatcact
atgccaaccaccaggaacttcttcccggnccactgcatcytgrgctacwgtttatgtccwccatgcactg
gtnacctcgcttacccgantccggtgagacagaacgcgcgcacacacaagttacgcgaagcgggtttatt
acttacagacaggcagcaagggacaacagaagcctaggattcagggtragyymgtcycccaaggctcagg
aaagctgcccagggcggatggaatcttgwctgcgcgtgccccacttgcactgcagctgagggrccccgga
aggcaccccgccctgggttttatacctcaggaacmacatgacacgctgggctaaagcgttgaaggacatc
ctgtttcyaggagaganwggaacagagcccaggctgttcnggccagttcctccctatctcaggatgttgc
attcccagcacattctacagttattcttgagaactacaagcaagaaagaggggagwactgggtcggtcca
aggccacctggrgaactgtcctgcagagctatccgag
>MER70B   Primate MER70B repetitive element - a consensus.
aagcagattcgctaattaccagtcccaagagaagactcctactgcgtggagaatagcgaagatcatcact
atgccaaccaccaggaacttcttcccggnccactgcatcytgrgctacwgtttatgtccwccatgcactg
gtnacctcgcttacccgantccggtgagacagaacgcgcgcacacacaagttacgcgaagcgggtttatt
acttacagacaggcagcaagggacaacagaagcctaggattcagggtragyymgtcycccaaggctcagg
aaagctgcccagggcggatggaatcttgwctgcgcgtgccccacttgcactgcagctgagggrccccgga
aggcaccccgccctgggttttatacctcaggaacmacatgacacgctgggctaaagcgttgaaggacatc
ctgtttcyaggagaganwggaacagagcccaggctgttcnggccagttcctccctaamtcaagatrttac
attccctaggagggkcaagaacaaggccaasctgttccgggcagttcctccctatctcaggatgttgcat
tcccagcacattctacagttattcttgagaactacaagcaagaaagaggggagwactgggtcggtccaag
gccacctggrgaactgtcctgcagagctatccgag
>MER72   MER4I-group.
atgaagacagcgtwctcttnngnattancatgataaataaaaatraaatcctaaracccccaaccgactg
arcagaccacctcttggccgaggggaccccagagwaaccttgaaarctgagttcycggccgkgacgggat
ggagggrtcagacacacctcgttrtacccctcccttrctaaccatsaykrggcttgcytccctaargrct
aaacagaaaccagcyctttcgaaagactccagcactgrnnnnnnntcctttccttcctgrtaagagacca
ccraccacggagwgkttctggccagtctncggaggatgtrcagcgagggttttcgtgtcctctgcttcac
cttttgacgtcagagggccgaaaactccaccctcngatcatgctaacactgccaktttttgwacatgggw
cccatgaagaggcaggaarctcaattgtgcacgcgtgtgtttctccyttcacgnatattcatgactcctc
ctatagcttattgaatatgtatatttggccatyccactcagcataaattcctgttccctttgccyctccc
tcgaaatgtctgtttctggcttctggccggaggctacgcttcccagcctgtcagaatggccgccctgcag
gctgcaaccctttatgagaaataaagctctcctttccaaatttgaacctcntcattcttcagttgacaaa
gtrkcaaarat
>MER73   Long terminal repeat.
tgtcataaatttgtttaatacagttgctgcctcggcatccatttttaggcctgacataagttgtttgaaa
cccagtcgtaccccgtcacctttggcctagttaaaacntctcctccctgtgtggttgtttgcgatatggc
ccacttgttcctcatctcgctgacccaaaacccaacacaccccacagctgctgaccatgataaaacctaa
tggtcaacgccagagtcatgtaaataagtttcctccttctggcatgttttctttaaactagccaatccac
aacccccgtnggaaagcctgagggataatgcccatggaccttaataaaggcatactcccgcagctgctct
ctccctccctacccactggttgagctccctgccgcctccagacttcccatcggcctcccgtcggcacccc
taacctctctgggatctgtaagtaatamatttcttctgtttcatgcattttngtttcacttgcctcactg
tgtctcmcctgacacacacactcgaacctaactttcccccgggtcagggctctcctagaaaatggctatc
ttggcttatggccactctcaagagagagacctcaagaccaaattagaaagaaancataacgataaaaatc
acaaca
>MER74   Putative long terminal repeat of endogenous retrovirus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER75   Primate MER75 repetitive element - a consensus.
cccttttcccgtttgccccgagaatactcgccggcggcgcttgcggctgcagcgtttaccccgagataac
tttgccatgaaatatnttgcttttattattattttcgcatcgttctagtatatcgactttggaaacaaaa
gacatcgttctatttatagcattctgtttttagtagtggtatttccatttacaaaatatagtaattctcg
attgctgaaaatgtcaaatcctagaaaacgtagcattcctacacgtgatgttaacatcgttctcgaacag
ttgttggccgaagattcatttgatgaatccgatttttccgaaatagacgattctggtgattcagatgatt
ctgatgttagttctgtttagaaataactccaagaacagtttttatattttattttcacattgaaaatcag
tcagatttgcttcagcctcaaagagcgtgtttatgtaaaattaaatgagcgctggcagcgagctgcactt
ttttttttctaaacgggaaaaggg
>MER76   Primate MER76 repetitive element - a consensus.
tgaggagtccagctcctggcyaaaaacctacgtgtgatttttcaggcctgaccataggcaattacaaagg
ctttacctggcaggcctcatgggggaaagctgccctccccacaccagacttggtgcacagccagtgcatt
gcagtctctgaagggagttgcagtcaaggactcaggcccccctggccggccacgctcttacacatatctg
cattcctagcccaggcgcctccgttcggaggcctctttattcggggccttctgcagaggtcttcctcagg
cgcctctgccgagacctctttatgaggggtggaagcgggagccttgaagacatttntctccactctgact
cagtactcagtgcttttccactcctatcccttccctntcctcncctccatgacccacgggtccataaaac
tgcaggagccttttgttcagggctccctcaacagtgagatgacccccatgtctgtgccgatccacctgac
ccttgaccggtgccatttccatgnggaaaaatggaacatggggagtcggtactttctctggttttagcct
cttgcttatactatcgaagkaagtgattaaagatttgactgttactttcattttggcttgttgccttaat
cggctnctctgacacccggcagctcagctctctctccagctcagctgagctcctgaca
>MER77   MER77 repetitive element - a consensus.
actacggggggaggtgtcaaattcaaaggtctccaagacmaccctcctgtttartgattcgctagaagga
ctcacagaactcagaaaagccgttatactcacagttacggtttattacagtgaaaggatacagattaaag
tcagcaaagggraaaggcacataggncagngtccaagagarmcaggcacgrgcttccagttgtcctctcc
cggcggagtcgtrcgggcagcgcttaattctcccagcaacgrtgtgtgacagcacgcatgaagtattgcc
aaccagggaagctcacccgagccttggtgtccagagtttttrttgggggtcggtnanataggcatggntg
accccgcagcatggctgaccttggtcttctcaggcttgagccncccaagcatggctgacctnagttactc
agtctycagcccctccagargtcarryaccgtgtagcctaaggcccccaccataaatcacattgttagca
trractgtccggtatggcccaaggccytcgcagataaacaaagayactyttatcaggcaggacattccaa
gggcttagaggttatctcccarrgcctgaggataamcgagggccaganctttctttgggcaaggttaatc
ctttactgyayaagaccaca
>MER80   MER80 repetitive element - a consensus.
caggggttcttaaccttttttgtgccatgggcccctttggcagtctggtgaagcctatggaccccttctc
agaataatgtttttaaatgcataaaataaaatacataggattacaaaggaaaccaattatattgaaatac
agttatcaaaatattaaaaaaccaaatttgtgatatagtaatatatgtgcttctttattaatgcattaaa
taacaagatctagcggcgggtctaataactaccgtaatttcgaagtagtgatgagcataaatgatatttt
gagatatctgcaacaactgtaatgtgatatgaaaatatctgtgatttctattggtgacaaagtcacaggt
actgctaatactactgtggtttgttgcctacattcataattgaaggaaatgctaaatttcagttagaggt
tagtgaaaataaagatgtaanttttttccccatccaagttcacggaccccctgaattctatccatagact
ccaggttaagaacccctg
>MER81   MER81 repetitive element - a consensus.
tagggtgaccaaccgtcccggtttgcccgggactgaggggtttcccaggacgtgggactttcagtgctaa
aaccgggaaagtcccgggcaaaccaggacgagttggtcacccta
>MER82   MER82 repetitive element - a consensus.
cagttgatcctcattatccacagtagttatgttctataaagtcaccgcgagcactgaattagcgaatact
gaaccatcgctcctagaggaaatacagagttaggttcctgcaagcctctggtcacaacattttcatcaac
cgatcaatatataacyttgttttatgtgtgtttctgtttaaagacnncttatttaatatatattgttgat
ttattaacactgaactcacagccaacagcactataactcatgcctgaatgaagcttatctaacacacata
ttttctccataaggtacatcacagccttcttgtgcttaggaacaccagacagcacttcagcactatgctc
ggggccattttaaacggcgaaatcaccaacaaaaagcacaaaaatgtgaaaaacgtggcactaaatagac
ctcgaaaaggacgcttgtttacggtatgagagctgaaacaagaaggcagagcgtcgccttgttcgacctc
agctgggaacgtgcacgtcgggcgactcgaatttttcgctgctctgcgcatgtntgcaaatgaccgngaa
agtgctncaagtattgattttggggttacaaataaattttagcgagtaggcgaattcgcaaatacggaat
ccgtggataatgaggattgactg
>MLT1G   (MLT1g subfamily) - a consensus.
tgtggcggattttaaaaatggccacaaattctttgacactcttcccatcgaggagtggggtccgtntcct
ctccccttgaatctgggtgggctctgtgactgcttcgaccaatagaatrcggtggaagtgatgctrtgtg
acttctgagsccaggtyataaaarrcattgcagcttcctgcttgctggaackctcacacttggagtcctg
agccaccacgtaagaagttcarctrccccgaggccaccatgctgtgaggaagcccaagctastccacana
gagaaaccgagccatcttgraagcggatcctccagccccagtyaagycttcagatgactgcagcyccggc
tggcgtcttgactgcgccgataccacgtgggacagagawgaactrcccagctaagcccagcccaaattgc
tgacctatagtattgrgaacgaataaatgrttattgttttaagccactaagttttggggtggtttgttac
gcagcartagataactgaaaca
>PABL_A   Long terminal repeat of endogenous retrovirus; subfamily PABL_A.
tgtggcaggccaggtctcactaacacaggcctccataacaactgtttcagcactgactgagtggttaagt
taaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagcccaccaagag
ttttgcctaggcctttcctgggccttgaagcatgacaaaataacgaaggaattcttaacaggacccgttt
aggattaaacaagttttactgggggtctgaagaaactccccaggcctccacaaacaagtttattgggggt
ctgaaggaactccccaaacctccgtgatttagcaggagacaagataagggtaatcaccccagcacctgga
cccatttagattaagtaaatttactgaggctccagaggaaggtcttcaggactcagaccttagttataga
ttagaagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagcttagaaggt
atataagctctggaaaactttgtaattttgagttggtctggtgataatttccaggccttctccctgtaac
cggttacagaaataaaaactctcttcctccccagttcatctgcatctcgttattgggccacgagaaatag
cagcccgaccctcagtttggtccgggaaca
>PABL_B   Long terminal repeat of endogenous retrovirus; subfamily PABL_B.
tgtggcaggccaggtctcactaacagctgaacaggcaggcctccatgacaactgtttcagcactgactga
gtggttaagttaaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagc
ccaccaagagttttgcctaggcctttcctgggccttgaagcatgacaagataacgaaggaattcttaaca
ggacccgtttaggattaaacaagttttattgggggtctgaagaaactccccagacctccacaaacaagtt
ttattgggggtctaaaggaactccccaaacctccatgatttagcaggagacaagataagggtaatcaccc
cggcacctggacccatttagattaagtaaatttactgaggctccagaggaaggtcttacaggactcagac
cttagttatagattagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagc
ttagaaggtatataagctctggaaaactttgtaattttgagttggtctggtgatattttcccggccttct
ccctgtaaccggttacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacga
gaataagcagcccgaccctcggtttggtccgggaaca
>MER57I   MER4I, MER41I and MER65I retroelements.
[encoded data, 7597 characters]
ttttggtcaatctctcaaaattgagaaaatgaccaaaaggggggaat
>MER65I   MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>MER41I   Primate MER41I retroelement; its LTRs are MER41 sequences.
tctttctggcaaccacagaagggactacagtgcagaaaccctcaacccaaaggctaactttgagtaagtg
atagggtcctgtaacatctttctggcaaacccaaaaggacaatactgaagaaacctcccaatgcaaagga
aatagactacatcattgataggccgaccttgggcaagtggtggggtacccaggtaaaagatgggattggg
ttagaggcccaatttagggaagtttgggtctctgctaagacagactgggttaaaggcccctcttaataaa
tggcaaggatgcttgaccaaacttggtttagagggccaacttaggagggttagagtccttcctaagattt
aaggggttagaggcccctctcagtaaagtccctcatggttaagaacgggtttggcactaagggatgttaa
ctgccattctctttggattaatctgtgttgcactctttgctgatggctatgggtgacaggattaggcatg
tgatcctgtgatcacgggacatgaggagctttttcttccctaaaaggggaaacttcagagctgctgggcc
tgctggaaaagatcccttctcaactgacaagtgaccgcctgaacttttgattcagtgtctgctgcaatgg
gcaggtctttctctggtctccctgagcgccttgccttccccaccctgccataagcagtgcttttctccct
tccctttccyctctctstctgtgcaaaccggttaaacraacgataaaaatcactgtttatctcctctgta
aagttttrattaatrgaaaaaaggatttttgaggctagtcttaagctgtagcgaatctggtgtrctttgt
gtgtctttctgtatngttctgtcataaaraggggtaccttaggatagaacgcwggctkaggacmcycgta
agctcactgttcaacccagcccagcaaactggtcagttataaattttgctgcaggtccctgaaacaacaa
caaaaaantggatgaggtttccctcccatcttgttttatgtccttggragcttgaccttgtaaccatgtg
gcgrtrctttcgcttggyctctgccatcacaatggcgtcccgggttcaggrttcwattcctgnctcagrr
gatgagtttctttatattcttctgtctatgtatttatatgtgttgtgtgtrtgtgatgtttatatatraa
agagctntrattaattggcttaaaraataagaagagcttaaatcaaatattttgtcagaaaartaraarg
tstartgccttttagttcacgtgactttagtaatctttgrkaaataaagacagtttaaagattattgrta
aaataaaaatgtcttcaaaayttaatktaracatttggtctraattagrcaggtcagatactatstctac
tagatgytttaaggtcataaactgcttctatgacttttgataatttttyaacttgcytgctttanagcca
ttngattctaggtaaggcctggggacatgtggagttagccacgtcccctagctatgctggagagtcagac
tttatctgcgcttctgcctggtgtgtccaaggctaggctccacacctagtacataattaaaatcacttac
taaccaggtttttcaccaaaagtaaaagttcttaagagttaacattgtaacatgtaattaagactactaa
agaaacagttccacaagtaagtcctataaggaaagtgaaatgtgtttttggttaaaaaaaaattataaga
agtcacgggagtxatgagttttctttactttgcctaaagggttagaggattattttaagttagatagaat
aaagctgaaggtttaagcaagttgtggaaggtttatttaaaaaattaattgtaagagattttgtgtgtga
atatattggctaaagttgaaaaggcattattcagtttttccataaattaaacattggaataaaagcaaaa
caggtttttgttagagcaaaaacctgcttatgacctgctttttaacaaacatttgtaaaggattataaaa
ggtttatgagaatgttaccttatggtcaaacattaaaattgggtagatatgtctataaggttttattaag
aattgggtttgacatcaataatacactaatgcaacagtgacatttggctgatttagtataaaagtcatag
aggaagcatcatcaaatatgaaatggtgtttggctttctttgggctgtatttgtataaatgtgtcattgg
tacatgttccaaaattattttaaaaaaaacttctttaaccctgatatgacttagtgtatgctattaataa
ttgttatgnnnnnntaaattattgcgtgccacagaggtaacaaattttccttgtcaattgtgtctttaac
tgtggctgtcctaagactttttgtcatccatagacaattgttgtcttgttttggtcctctttagaaggtg
gtttataatcagctgtagaactctaacaggtgctcttaaatgcaggtttctgataactttggagattgtg
acattagaacggaggaaaaacattcaggactcatgaagagctgaaatrttcatgaatatcaagcagaaca
gggagttaactgcatggactgaactaanagaagtctaacgtgtaaaacgttgctgatcctttgttttgtt
tttcagagtcaaggaaactttttcttttgagctatttacagcttttagcaattgagtaaagtatactyct
gtgaacaaaatttggagcatrtttgtttctctctacctgatttctccagaatttggaaactattcgtgag
tattctcaatttatggcaatatagttatttgcataagtgcaataagaatctgttytctttagtaacagga
cacaattggagaaattggttattttaccaaggctttgactggaatggcatacttccctttaaggaatcaa
anttgacttrycgagccgataaaagccccttggggaatctgrcctcataccttnttcayacgcagtccct
gtacagggttcctgacctgtggtaagtaaagaatgtcactttctracaggcccagrarccccaagttaty
ttgrgacctcaagaggagaggaatttacycaactcataggtatttgakggtacaaanccatggctgggct
cagctttaaaaaagtcttatccgagattccttctatgaaacaaagttccatcaaagccaattttaaaagc
ctatgtgaaaaataattattcttgctgcactktatacaaataatyaggccaagtataataaarcaaaycg
gtcctaccatgatttgtctttaryaaaaatggraaactggagagagaaaaattatgtttcaaaacctata
gtacacytgttgttarattctartcttrcctaatgtttttcagttkttnttatnttctrcantttagact
aactctacttattcctgtgaaccaaccagtgatctctggctgcwgctcagaagaaacaagrartgatggg
taatataaaaatccggatnntattctaattctgggcacgtattggaatcggctaacaaccccatatcagc
ttggttccaatagttgcccagttcatggaaagccttctaatttagtttacttgggataattttgcttatt
ttgctttactnttgtggaatatattgctgttgtactctttgtgtaggaatgcaggataagcttactraat
gttttcttaaaycgaacccttattcctcttccagggtaccatcttttgttgggaactcagttacaaataa
ccctcaccataccagtactttctggaatgagctcctcttctaccctggagggcaagagaccataatagtc
aggcagaaatatcattgcccctattcagcctgaagaagttacagaagatgaatctttgtccttctacaac
cttaggattaagggttcttttata
>PTR5   Human PTR5 mRNA for repetitive sequence; part of LTR.
tgagaggtggcagtgtgctggcagccctcgcagccctcgctcactcttggctcctcctcggccttggcgc
ccactctggccatgcttaaggagcccttcagcctgccactgcactgtgggaacactggccaaggccagag
ccagctcactcagcttgtggggaagtgtggagggagaggcgcaggcgggaactggggctcgatgcggcgc
ttgcgggccagcgtgagttccggtggttggtggcttggcgggccccagactcggagcggctggcctgccc
tgctggccccaggcagtgaggggcttagcacccaggccagcagctgtggatggtgcgctgagtctcccag
cagtgctggcccaccccaccagcactgcactcgatttctcgccaggccttagctgcctccccgcaggcag
gccttgggacctgcagcccaccatgcctgagtctcccctgctgccgccgtgggctcctgcgtggcccaag
cctccccgacgagcactgccccctgctccccggtgcctggtcccatcgaccccaagggctgaggagtgca
ggtgcatgctgcgggactggcaggcagctccacctgcggccccatgcaggaagccagctgggctcctgag

>LINE2   MIR2/LINE2 repetitive element - a consensus.
ctgtcattcattaccgntccttgttgcagtcatccatcgagcccggctcggtcactccctctcatttctc
gaagaktttrtctcctagntcaactgtcactctctcataataatantcctgtcataattcttggtgattt
caatatccacatagacgatccatccaatactctggcctctcagttccttgacctcctctctcccgtggtc
ttgttctcctctacccactctcagccactcactcccatggtcataccctagatcttgtcattactaataa
ctgcaactcctccataatctcaatttcaagcatccyactcttttaccacyacctcctatctttctagctc
actctctctggtgccctaactccaataatyctttgaccccaccgagacctmcaatccattgatctcatat
gcttttcactgtnccgtgtcctcttccctcctttcwttgctcagattccatggtcaatcattataatcac
tcccwtacanataccctcaactcccttgcccctytctcmctttgtcttacttrcttgncaaaaccacaac
cctggttaaatccaactntccgactaatttrcgcctgcacccgngcagctaaacatggctgragaaaaat
acacaaccatgctgactggtctcactttaaatttatgaccacgaacctcaagtgrgcccttaatgctgcc
aggcaattntactacatttccctagtccattcactctcccactctcctagatgactatttyatactttct
tnyttctcaaacctccaacayyyyytnccatctttactctcagctgatgaccttgcttcctatttcactg
agaaaatagaagcaatcagaagagaatttccacatgctcccaccaccacatctacccacctacctgcatc
tgtacccatatactctgccttccctcctgttaccgtggatgaactgtccgtgctcctatctaargccaac
ccctccacttgtgcactagatcccatcccctcttgcctactcaaggacgttgctccagcaattctcccct
ctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatataaacatgctgnnat
ttctcccatctttaaaaaacaaaaattctccctcgaccccacttccccctccagctaccgccctatttct
ctgctcccctttacagcaaaacttctcagaagagttgtctatactcgttgtctccacttcctcacctccc
gttctctcttaaacccactccaatcaggctttcgtccctaccactccactgaaactgctcttgtcaaggt
caccaatgacctccacgttgccaaatccagtggtcagttctcagtcttcatcttacttgacctctcagca
gcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacaccacac
tctcttggttttcctcctacctcactggccgttccttctcagtctcctttgctggytcctcctcatctcc
ccgatctctaaatattggagtgccccagggctcagtccttggacctcttctcttctctatctacactcac
tccctgggtgatctcatccagtcycatggctttaaataccatctatacgctgatgactcccaaatttata
tctccagcccagacctctcccctgaaytccagactcctatatccaactgcctactcgacatttccatttg
gatgtctaacagrcatctcaaayttaacatgtccaaaactgaactcctgattttcccccccaaacctgct
yctcccgcagtcttycccatctcagttaatggcaactccatccttccagttgctcargccaaaaaccttg
gagtcatccttgattcctctctttctctcacaccccacatccaatcyatcagcaaatcctgttggctcta
ccttcaaaatatatccagaatccgaccacttctcaccatctccactgcyaccaccctggtccaagccacc
atcatctctcacctggactactgcaatagcctcctaactggtctccctgctyccacccttgcccccctnc
agtctgttctcagcacagcagccagaatgatccttttaaaatgtaaatcagatcatgtcactccyctgct
caaaacccttcaatggcttcccgtttcactcagagtaaaakccaaagtccttaccgtggcctacaaggcc
ctatatgatctggcccccgcytayctctctaacctcatcttctaccactttccccctcgctcactctgct
ccagccacactggcctccttgctgttcctcgaacacgccargcwcgttcctgcctcagggcctttgcact
tgctgttccctctgcctggaacgctcttcccccagatatccacgtggctcactccytcacctcmttcagg
tctctgctcagatgtcacctyctcagagaggccttccctgaccaccctatctaaaatagcacacccyctc
ccccatcatgcccatytttcttaccycgctttatttttctycatagcacttatcaccatctgacayacta
tatwatttayttgtttgtttgtttrttgtctcctccacyagaatgtaagctccatgagggcagggatttt
gtctgttttgttcactgctgtatccccagcgcctagaacagtgcctggcacatagtaggcgctcaataaa
tatttgttgaatgaatgaat
>L180_5   L1PB or L1M1 LINE1 repetitive element 5' end - a consensus.
tttttttcccaagatggcggattagaggcttttagtatgcctcagccacttggaaatggnaaaatagtgc
ataaagatcaactctgtgagctttaattcaagaaggaaaatgggaatccaccataatcgtgaaggacacc
ccagatcctagggaggagaatgtnggcaaacagcccctatgatggcgtccagctgataaaagtgagtgaa
gccccagtacgcgagagaggcagagagtctccctctgtgactcacttttccactggggatccgagcaacc
caggccaagggagaacactttgtttctcccaagccctggagctaacgtggggagaggcttggagatgctg
tgagggaaagacaccgggaaaagctgcagacattttcccagacctaggamcaagagcaggatgccatttt
taatccgggcgcatacaaagtcagccattctttggcgacccggcagcgtggccgcgcaggcattttagtc
tcaggccagagattggagcgcctgctctggagtagggtaggggcctccacagccagaactgtgaaaagcg
cctcagcagtaggcgctggaattgtgctctcccctactgcaagcctggggcgggaggagagctgctacag
ctgcagtttctcctgggcggcgagacttgcagccagggccagcttggcgacctggaactggtctgtgtgt
gccattgctgggtgccccagcctgctcccctgagatcgtggtgcagsggggccctctctgctccacgccc
aggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagccgccccacccttcctg
kgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctccaggcattcagagcac
ccgctcgcctggwtcagcagcctgagccgccccacccttcctgkgcatagatcgtggtgcagsggggccc
tctctgctccacgcccaggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagc
cgccccacccttcctgkgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctc
caggcatctggagcacccactctcctggattaggagtttaagccgccccacccttcccgtgcagagaact
tggggctgaggaggtttccctgctccacgcctaggcacacctctgggcgcttggtggctgcccactggat
tctcccttggcgctggcgcttgtgcccgccatgggagatctgtaggcggacctgcctagtccggccccac
ccatcttggmccccgcccctccagggctgagcagrsagttcagancactntgcattccatgcatcagccc
attkcctgaggcaacagagagcttctnccagtaaacaaggatcaaatatatacccagccacactggccgt
agctagctcttacctataagcgccatctactggcttgtaggtcaaactgcacwgcccaatataaaacctg
ctaaaagaagtgcatagggctatagaagcaaagccaaaagaccatacccagcattctctacagtcacacc
mcctagggaggaggagaaaggaaagggaaagaaaaaacaccaataatattatagggaaagaaagaaaaga
aaaaaccctactcncatggaaataattacaaaaattagaagtgccagnatctccagatgagaaggaacca
gcacaagaattntggcaccatgaaaaatctgaatgtagtgacaccaccaaaggatcgcactagctctcca
gcaatggttcctaatcaaaacggaaactcagaaatgacaggcaaagaattcaaagcatggatt
>L1M2_5   Primate L1M2_5 LINE1 repetitive element - a consensus.
caaagaaatgtatktatgcaggagggcttcaagatggctgactagaggcakccggtactcgcctcctcca
caaagaagaaccaaaatagcgagtagataatcacacttcgaatagakcatctaagagagaacactggaat
tcaacagagaagcgacaggaaacacctaaagcaaggaaggagaaggaagcgaggcagcctgctcggccgg
gattggctgggagccaggagaggctccccaatgcggggaaagggtaagtgagagacccccagcggtccac
attcccaccacggactcctgcaatcctagccacgagagagcccctcaaccctcgcgggccctgagactaa
catagggagctgcctggagwccgcgcganggcattgctccagagagggagctcacgctgggtcccacama
cccccaagwcctaagcagctgcagcacggcgccattttgagagcccagccmccaccagactgcatcctgc
cctggggcccaacagcccctgcatctccacattcctggagccccastgacatnccccacccatggctgca
gctgctggggcaraggcaggaaccactggcagcaancccwcccctgcccagcagaggggtggccatacaa
tttcatryacaccaaggacaaattcccctgmctgcaaatgctaccactgngagctgctgtggagctgagg
yacgagcaatgcacncgctacccaggcgcctgcctatggctgctnccacwgaaagcaaccccaccctccc
cagcagcagggccacagtgcagccactgctgccctccacctgagcattccaccaggggcctggggatcac
cctgcccctgcctaccacagccggcgcctgcacacaccaccggggggcctgaggacaggcctgcccggcc
cagctctgccacacccmccagtgcccaagcacgccatctaggggcctggggatcgcccaacccagtccac
caccgctggcacctgagcactcctcctgggggcctgaggacgggcctactcagcctgccactaccaccac
agctggcacccacccacatgcgccacctgsrggcctggggactggcccgcccagcccgtcgcagccactg
ccaacaccaacacgcactgcttgggacccagagggttgtcccaccactgctactgccatcgcccatgcca
tgcyngctgcccaggggctcaagaacctgtccacccacccggcccaccgctgccactactggcacccaag
caagccacctggaggcccaagaatcggcctgcctggacccgctaacaccagtgccaatatatgccaccct
ggggcccaaggacaggcacactcagcccactantgccaccactggggcctgaagactggcccacctggca
tcccagtccccagcaaaacttcaccacagcctccactaacaaccacaccctaagccactgaggaaatcac
agacaccactgatgctgtttacagccaaagaaatcatacggagactacactactgcacgcacccagaatc
aaagccaaagcgccctacccaaccaacaccatagatacatctwcaggaaaaagtccttccctacgaaagc
tamtccataaaattggaagaagcgactgttacaccagatgtgcagatatcaacgtaaggacacaagaaac
atgaaaaagcaaggaaacatgacacctccaaaggaacacaataattctccagtaayagactccaawnaaa
aagaaatctatgaaatcccmgawaaakaattcaaaatgatgatattaaagaagctcagtgagatacaaga
gaacwcagawaaacaatacaaggaaatcaggaaaacaattcakgatatgaatgagaaatttaccaaagag
atagatatcataaaaaagaaccaaacagaaatcctggaactgaagaattcawtgaatgaaatamaaaata
catttgaaagcttcaanaatagactagatcaagcagaagaaagaatctcagaacttgaagacaggtcttt
tgaaataacccagtcagannnwaaaaaawaanaataaaaaagaatgaasaaagcctatgtgacatatggg
acacmattaagcgaacaaatatttaaattwtgggwgttccagaagaagaagagntgggnaaaggcnyaga
aaacctatttaataaaataatagctgaaaacttcccaggtttagcaagagattnagacatccagatacag
gaggctcanagatccccaaatagatncaacgcnaaaagggcctctccamggcacattatagtcaaactgt
caaaagtcaaagacaaagaganaattctaaaaacagcaagagaraagcatctagtcacatataagggaat
ccccatcagactaacagtggatttctcagcagaaaccttacaggccaggagagaatgggatgacatattc
aaagtgctgaaagaaaaagcaaaactgccagccaagaatactatacccagcaaagttatccttcaaaaat
gaaggagaaataaagtctttcccagacaagcaaawamtgagggaattcgtcaccactagaccggccctac
aagaaatgctcaagggagtcctamacctggaagcaaaaggacgatatctaccatcatgaaaacayacaaa
agyataaaactcactggtagagcaawcacacaaakgagaaagagaaaggaatcaaatgktaccactacag
aaawccaccaaaccacaaaganaaacaatgagaggaaacaaaagatatacaaaacaaccagaaaacaatt
aacaatatgacaggaacaagwcctcacatatcaataataaccttaaacgtaaatggattaaatttcccac
ttaaaagatanagactggct
>LTR10A   LTR from endogenous retrovirus-like sequence (HERV-I).
tgttaagtacggtgagttctgagatcctctccaaagaaccagtatgtcagtatgttcagctcncctgttc
tttgttctccattttaaagtttaacttcagtatgttcagctcncctgttctttgttctccattttaaagt
ttaactcaacagttctaatcagtagttaacgcctgttcccctggtcacctgctccatcctgactcatccc
gggtcacctgctttgacctgagtcacccttagtcacctgctctgtaaccatccttcccgccaaactactc
accccgccactctggctcatacccctgctctctttaaaatagccaatcggaattagcttagactgtgcgg
tccaaccctagccaataggggaacgacacagcagtaggggctacctgcatcaggaataagaaccccttcc
cctcccttgtccaggtgtgctctcgccattgctccatctgcgagacgcacccttctatagaagtaaaatt
gccttgctgagaaaattaaatttatgtttgagtgctatttcttttgcggcaccgaaacgaaaattaaatt
tatgtttgagtgctatttcttttgcggcaccgaaactttatttataaca
>LTR10B   LTR from endogenous retrovirus HERV-I.
tgttaaatacagtaagaaattcttcttcaaaagtttagcctgcttaagtttccttgtcctttgtttcctg
ctttcaaggccagacttccttactctctgtgtttcccctaccctggtaaacaaccttcctgccagtcctt
acccatacagcccacattccacatctgctacccactctgtgatttacctctcccgtcgcaatagcctctc
ccaccaaaactgatcttcccgccttcccaccagtgcaaccacattcctgcactttgcaagttagccaacc
gggttcggattgtgcagtccaactccagccaatggagtcaggacacagtagcagggacaagctgcgttag
acataaaaacctctgctttcctttgtttagggtgctctcgtggcaaccagacttaccaggagctctattc
tgcaaaagtaaatttgccttgctgagagaccctttgtcctttggctcagtgttggttcttctttgcagca
ccgagcatttgtttccaaca
>LTR10C   Putative LTR from endogenous retrovirus.
tgtaaaaagtaaagtagaggttcctcttcaaagactttcctccccatctaattaggaataaatagtaact
tctcttaaaagcaaaatttattcaaagacctgtgctaacattcttaaatatctgctagccataataaaga
aatcaatgtactttatattcttagctcccacaatttagcctaaatatttgccctggcatgcttatactag
tccaagcaagcattaggtcatagcctgttcctcttccttatttgaaggtgtttttacctttctcagcatt
ccacaagttacttcctccttcctttgttctcctctgcctttgcctcttttaaaaagttctaagttgctag
ccaatcaggacaaatacagaatgtgaggtcctgttccagccaatagaaactggacacagcagtagggtgg
acgcgtcaggttataaatgaccctgtctcctttgttcagtgtactctcatggcaaaactgctggtgagtg
taccctttctgcagaaagtataaawatggccttgctgagaaaattaaatttatgttcaagtgctatttct
ttacagcaccacaagcatttcaaaca
>LTR16A   LTR16A repetitive element - a consensus.
tgtgacggacatgraggtgcgctgcccagatcccccttcaagaacggaartyttattncccyagctgctg
ggagwgctgtcggcagacagccctcagctgtcagccccttcaggaattgcctcngctgaagagagccgcc
tcgcccaaggtcacgccccctccccggggcagcccacatccaatgactgrtcaatrtggaggtataaagg
cccggccctctcgccccaactcgggacaactctgaagggccatyccagctccagagctccccgtggggtc
ggctgaggcctttgttgcgactgcattgcagcccaacttctccctctgcccaatcctgcttccttccctt
cccttccacaggcgttgatcccaagggcgctccctaataaacctcctgcacgctaatctccatctcagag
tctgcttcccggggaacccaacctgcaaca
>LTR17   Long terminal repeat of endogenous retrovirus HERV17 - a consensus.
tgagagacaggactagctggatttcctaggccgactaagaatccctaagcctagctgggaaggtgaccgc
ttccacctttaaacacggggcttgcaacttagctcacacccgaccaatcaggtagtaaagagagctcact
aaaatgctaattaggcaaaaacaggaggtaaagaaatagccaatcatctatcgcctgagagcacagcggg
agggacaatgatcgggatataaacccaggcattcgagccggcaacggctaccctctttgggtcccctccc
tttgtatgggagctctgttttcactctattaaatcttgcaactgcactcttctggtccgtgtttgttacg
gctcgagctgagctttcgctcaccgtccaccactgctgtttgccgccgtcgcagacccgccgctgacttc
catccctccggatccggcagggtgtccgctgtgctcctgatccagcgaggcgcccattgccgctcccgat
cgggctaaaggcttgccattgttcctgcacggctaagtgcctgggttcgtcctaatcgagctgaacacta
gtcactgggttccacggttctcttccgtgacccacggcttctaatagagctataacactcaccgcatggc
ccaagattccattccttggaatccgtgaggccaagaaccccaggtcagagaacacgaggcttgccaccat
cttggaagtggcccgccgccattttggaagcggcccgccaccatcttgggagctctgggagcaaggaacc
cccggtaaca
>MER41D   internal sequence belongs to the MER4I group; subfamily MER41D.
tgttagggaagcaggagcctaggagagccagagtgacaccattttaaaatcaactccatcttaaaactag
caaggcacattccttgccagtcacgacccatggtcctaagatgtttacagttgaggaagcagcttgawaa
tacctacaaggacacactcctacaacaacagaaagtccagatgtcccaatacccataacaatatatgctt
tcaagataattatagtcatgctttgatgtacttacgcactaaaatgtcaaagatagttttctttaaatca
atatamtaataaattttgtcatgctgtcagcccacccgcacgtaggcacagcttagtttagtctttacat
agacaagactcctatataagaaaagtttaagacagagatggcgcgttcctccgcctnctttccggggacg
ccctactctgtaatggagtagtttttaataaacttgctcttctcactgtactccgcaactcgccttgaat
tccttcctgtgcgagatccaagaaccctctcttagggtctggatcgggacccctttttctggtaaca
>MER51A   a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacactgacttcctagaactnaat
caaanggaaaaccccaactttccacgtccamgtaacmaaaggaccagaggctactccctttrcannnnnn
ngatgaaaaattgaaagtacctctgattggtcccttcccgcaaccaatcaggctggtcgttggcccaagt
cttcatttgcataggagtataactttgtaacttcacttcagcctctgattgatwrctttccgcaaccaat
cagacgtttgcatagggtgtaactttgtaaytcgcttcagcctctgattggtcccctcccacaaccaatc
agactgatcgtgggccacctcttcatttacatagggcgtaccccaagtaaccaatgggaaacctctagag
ggtatttaaactccagaaaattctgtaaccggggctcttgagccgcttgctcgagcccgctcccaccctg
tggagtgtactttcgttttcaataaatctctgcttttgttgcttcattctttccttgctttgtttgtgcg
ttttgtccaattctttgttcaagacgccaagaacctggacaccctccaccggtaaca
>MER51B   Putative LTR of retrovirus-like element - a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacacttcagctatgacaggaaat
atcctctccatagggcataggccgagtaaatgactttgtaactttacttcgtcctcttcatttacatagg
gcgtaccccaagtaaccaatggaatcctctagagggtatttaaactcccaaaaattctgtaatggggctc
ttgagcccctatgctcgggcccgctcccaccctgtggagtgtactttcgttttcaataaatctctgcttt
tgttgcttcattctttccttgctttgtttgtgcgttttgtccaattctttgttcaagacgccaagaacct
ggacaccctccaccggtaaca
>MER57A   MER4I group, MER57A subfamily.
tgttaaattaagtttagcctaaagctgcctccttacatattttaagttcggcctaaaggtttctctgtac
atagtgaactataacctaactggaggtgtaaacagaccgtagcctactcttgtgccaatcactgagtttc
ggccaatcacaggcagccaactgttcaaaccatgttcaaataaggcaaatgccgagctgtaaccaatcca
gctgtttctgtacctcacttccattttctgtacgtcactttcctttttctgtccataaatcttctaccac
atggctgcactggagtctctgaacctactctggttctgggggctgcccgattcgcgaatcgttctttgct
caattaaactcttttaaatttaatttggctgaagtttttcttttaaca
>MER57B   MER4I-group; MER57B subfamily.
tgttaaagcaagctaaatatagcctgagaaggactccgtacttctatatttgagtccttgtggatgaact
gtaacctagcttaataggcagacaaggttgaaaacctaacttaggagtatgcgcctgtaacaatagctga
gtcttggccaatcccagcggccatacttcaaccactcanagactgctaagtgttcaaaccgtgttcaaat
aaggcaaacgccgacctgtaaccaatccagctgtttctgtacctcacttccgatttctgtacttcatttt
cctttttttttatctataaatttgttccgaccacgaggcatccctggagtctctctgaatctgctgtgat
tctgggggctgcccgattcgcgaatcgttcattgctcaattaaactcctttaaatttaattcggctgaag
tttttcttttaaca
>MER65C   internal sequence MER65I belongs to the MER4I-group; subfamily MER65C.
tgtgaaagttgatcatacgaattgggtcattcttgtcatacccaactaaaaccagggccgaggggcccag
ggggaaaaggcactcggggcgcatagcattgctccaaaatataattctctgcaaccctggctgctgaaac
tgcctgttgtaacctgaaaccagttttatctaacagctactgaaacaacctactgtgactctaagactag
ttttacccaccaccgtcactcaccaatcagagcttgccagctccccaaaactttactagtgccaatgaac
tttctttcaaaacaatatgtaacatttctcttttttataaaacctccaaccttctctttgttctttggac
ataccgaagaccacctggtctgtgtgtatgccccaaattgcaattctttcttcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER83   Putative long terminal repeat of endogenous retrovirus.
tgtggagtcctaattagggaaaaggagtcaggctggcgggaccaggggaaagcaaagggagaaagcaaat
aagctataagtctgcctttcttcatggtccaggacacatagccctcctgcgcaaataactcacaatcttc
ctgcgcccaactattatcaaacacctcagctgacagaaaaatgcaagttagctcmctgcaaccttggcat
tatcagtactgcacgcagcmctctgcagcccaagaaccatcctataaaatctccagcaagcctttgtctc
cttgcagtcagctcctctcttgctggtctgcctgttgcttccttgcaacatattttcatactttctctaa
taaatctgcctttctttacctacaactgtcttggtaaattatttttacctcccgcgccaccggccccaga
tagtcgccgctccccacgrca
>MER84   Putative long terminal repeat of endogenous retrovirus.
tgaggagagcaaagaccacctggtgaccatcaaacaggccatccggaggcaaaactccttatctggggaa
tttagaagtaattagacttccctattatctaaagcaggcatctggttccaggcctctttcccnnaaaaac
ttataagtaactagaatttctatacgtctccggaatgcatgcatgctgaaactcactgtgcaacccttgc
tgacatcaaggcaccaaaatgtctacaaatgtaatcatttaccatgacctacgtggctaatatggtccaa
attacccttaagctcccgctttaaggtccataaatgctcctaaggaaaaatccaccgcggcgcgctcagt
cctctcttgctgaggcgccccgctgcactctkctgcagcgttctttctgtctaataaaactttccttttt
caaacctatactgttgtcggtaaattctttttaccaacccacgagtcgaccacttcccgatgccggggct
ctgacacctcgcctggca
>HERV16   Internal sequence of endogenous retrovirus HERV16.
[encoded data, 5041 characters]
tagatctgtcgagtacaaaggtggac
>HERV17   Internal sequence of endogenous retrovirus HERV17.
[encoded data, 8591 characters]
tcgtcggccaacctccccaacagcacttaggttttcctgttgagatgggggac
>PMER1   Putative non-autonomous DNA transposon - a consensus.
tagagcagtggttctcaaccttcctaatgccgcggccctttaatacagttcctgtgggtcgcgacccaca
ggttgagaaccgctgctata
>MER54   Primate MER54 repetitive element - a consensus.
tgtagtgaattcttataattttatgttgcctcggcatccattttgaatataagtttaactttctcatacc
agaagcagggctyagtcacccttgacacggtttccagttctccacctcctcccagttcctcaatgtggtc
gacccagatatctgccttatacmaccgcctcctggkgaccacctccctatggaacagctggatacaacct
acttgacttgccccactgacccccacaccccacatggactgtgcaggtatgccacagtgaccacctctca
gtcacagcgtgaccccacggaactcgtgcctgcttgctctaaacccaccaattagaactccccgcgggaa
acctgcttgggtaacgccctggaccccaataaaggctttggtcccacaggtctctctctctctctctcgt
tctccccacccgttggttgagcatgcgtgtcccggacagcttcccccttcccattggccctgcgaggcat
gctgccctcttctctctgggatctgtaagtaataaactgcttctgttatttcatgtgttttgttgtgctg
cctcctctgtgtctcacctgaccgacacacccaaacctaactctcttcctggtcagggctctcctagaga
gtggctatcttggcaggaataaactggacacaggtcagacaagagccacaagggcgtctgccagtgtaaa
caagtttcctgtgagagggacacctggtcacgggtcggacacctaggcattaggccgtccgccaggataa
agaagtatcccgtgaaagatacactgtaaacacccacaaccamcttccctggagccccatcagggcaggg
ctagagtttatagccactctccagagagagacctcaagaccaaattagaggaaaatacaaca
>LTR18A   Long terminal repeat of endogenous retrovirus HERV18 - a consensus.
tgtaaggaaaatggmtgtgctkyrgtcaaggaataggccaaggcagacatccggtscagcatgactcagt
argtttggagtgcaggygcacaacyccackcattatgtaaccayrycdcatgarrcgcatakgtaatcac
ycacrtgagctcatacttggctcggagccactattgtctgtraaaggtataactgccctgctgacgctgt
gcacatggctcgcwyccacccagagagagaataaagccatgtctcaactgcctacggtccctcgagtgtt
ytttcagctacccgccacycatccacccactcccctcggacctcagcttaggctggaacctgacacttgg
ctntgaca
>LTR18B   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgtaaggtatatggatgtgctctggtcaaggaataggccaaggtggacatctgggccagaatgactcagt
gagtttagggtgcaggcgcatactccacttgttatataacctgtttgtgtaagctcatactgggctcgga
gccactattgtttgagaaaggtataactgccctgctgacgccgtgcacagggctyktgcgggcgcgcccr
aagaaaagagagagagccagagttgtccatcttgtagacggacaagggggagccagggctcggctcgctt
gccacccagagaaawgagttaagctgctaaccctgtaagggagagcctaccttgtaggccagggaatgca
gctgtgtgtgggagtggcaggagctgcagagctggagcagacagccgagataaaggtagacagtgtgaga
gagctgctgcgagagagctgctgatgagagagctagtgtgagtgagctgctratgaaagagctgctgaat
aaarccatattcactgcctacrgycccyygagtgttctttcagctatttgtcgcccatccacccactccc
ttcggacctcagcataggctggaacctgaccctgggtgtgaca
>LTR19A   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgacagagcaggagcatcgccatcttggacaagcactgccattttaaagttccccttgatcaaaaaccgc
ctaaatccaacccaaagggcatcagcctaatggctaakgtcagcatgaccataaaccacaaatgacatct
ccgaccagaaacattccaaccctaagataaacccctcccyraccagagacatgccagccccgagataacc
tcccctccggccagagagatgtcagccccaasataacctccccttcaaccagagacattccaaccccaca
ataaacttctcccccacacagaaacattccaagcctgtgataaagctctctcaccctaaaacccttaaat
actcttagtctgtaagagagagtgctcctgactgaaatcggccagaagcccctctcaggtttattctcca
aaataaacctgtctttgactgttgagccgcttttcrtgtttctttcctctttctttaactcttaca
>LTR19B   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgacagagcaggagcaccatcatctcggacaaacactgccattttaagttccagctccttttccagccty
atgcatttcaaggaaatcactttycttctaactacaagcagccagaaagagcagacagtaaaatacagat
aagacagctcgggcacagagggaggtggkrggaaagtctcttgggtaactgccaaacttyaccctcatac
aatgggccccagtaaaayagkgggccttaataagcacattcctttyccttcgggtwcactaagatargga
agctaaaagcagactcagggaggcggcggggggtatgcctgcagctgcakraagatrtatgggarcagac
ayacaaytstccctcccagataagcacaacaaagagacacagaagcagtccaagcctctrataaactctc
tcaccctgaatccttaaaaactcttagtctgtaagagagtgtgcctctgacctaactcggccagaagccc
ctctcaggttcgttttctctaaaataaacctgtctttgttgactgkwgagccgcttttcgtgtttctttc
ctctttctttaattcttaca
>LTR20   Long terminal repeat of endogenous retrovirus - a consensus.
tggtawtgaaaggagttagccagcttgctttaggcagacagtaagggaaagggtccccagagaacctccg
acccgccccacaagtgtttacaccagatgttttgtgcagataagggaacttgcacagggggcttgcctar
acatkcccacagtgaaaaattttwttcyttaacacatgckcagtaagaaaaataaatcaatatggagtag
ctcagactragggccyacatgcgcactggaaggatggggtggagccaccaggaattcgcaccttatgcaa
atrrggaaccagcctcatcagcttytstataraagcyctkgtattcaactgtgaagtggcaaccwgmaac
ctgctttcaggacccctctcttttgctgagagcttttctcttcctttcgcttaataaattctgctcyacc
tcacccttcaatgtgtctgcatgcctaattcttcctggtcatgagacaagaacctggatytagctgagct
aaggagcaaaaaccctgcatca
>LTR16C   Primate LTR16C repetitive element - a consensus.
tgcctgaggrctttctctggccastgaagccagmtttgtcngcccacgtggcaagccggaaatgctgggg
agttaacaccccttggaagcagccctcaaccaatgasagatggggagttggtggataaataccccagctt
cctcacccctcagkgggataactctgaggtatgtgttctacactgtctcccagagtttcccagyrggayt
gagccccagttgcccacagtggtaacttgmtaatatacaytttattggcttccttctctttcctgtctca
cttccccacttccctacyagtgtttcctgggatcacctcccaaataaactacttgcactcaaatccttgt
ctcagggtctgcttctgggggaacccaaactaagaca
>LTR21A   Long terminal repeat of endogenous retrovirus - a consensus.
tgttagggacaaactgcccccaagaaagcttcttggtgctgcccacccctccccgcaaacctctccgcgc
tgcccacccttcccccaagcctytttacatttctaagcccttatctaggcaccacggtgaagccagcctg
atagaagacttyacytatcagrccttgctgcaataaagcaaaccccaattacaaaccatccggaccgcac
agggggaggtcgtgggaarcataaacaaactttacctacaccctccngtaccgtaaacgtcacaaggtga
tatgtggcaraattaaccagcaaacaaccccgggatgcrgccataccaaagractccctcaaactccctk
ccccaatrtaaacccctcattctgtaagcttggggctgcttyccttgactgtkawgggggcagccgrcag
gttaataaargcttgcctgaacttggggctctctctctytggtcctttctctcggctraccttacattct
cactctctaagttca
>LTR21B   Long terminal repeat of endogenous retrovirus HERVH22 - a consensus.
tgttagggtcrcccyraycagacyrytcccttcccctcccacaggmcttacaatayrgtccyttgyrctc
tccgcacagctaccccagggcaaaaracaaaycccccttcactgayccytccagtaactgtscrgacagt
tacaggatgcggtyaacatrtctgttcacctcgcataacaaagctggcaaaaaaacatctccaggatgcr
gacaagwcacytgcacccyygactcactcagctccccsacccyracccagttctcctgcacccccaactc
agctcccgcaccccgacctrgttctggccctataaaarcctgctatwgtctgtaagyrggkctgcctcct
yyaactgtggtrgagcagccaagcagctcaataaagcttgcttgcctgactttgggtctcytcatccttt
ctctcggctgaccttaca
>MER85   MER85 repetitive element - a consensus; MITE.
cccatttatgcctgaggttgcaattttttgaatttttgcatgagtgaaaaatcagaccttggcgatgacc
ttgagcagtaggatataaataactcccacatgcttagcgttccaataatggaacactaggcataaatggg

>LTR22   Long terminal repeat of endogenous retrovirus - a consensus.
tgtdgggrttcastcaggvtggtggsagaaatattaaagggaaatattagggaaagttataggaaatagh
cacaaaccttcttggaaggcctgaragtttgcawaacttcrgtaatagathtggctgaaggcagccartt
cccttaccttwragcattarakcatagggtaaatacwaaggaawatagaggcttccccagttaagtctgt
ttaycctacytccattaactagcttgttkastcakgtggtcctmttggggmaggtcgaccagggatattg
ccccstaatggtatttacttyagaccwgggtgcctragctttaatcattactwgggstactctcttaacm
atgtyaattacccwcwagtgtgttgactcaaagcctttgtyawtwaatctatactraataaatgcctgsa
gtgcyagctgnttagggccagcwgcwgtkacaaacctyycttggwgtstgtaagcggcctggacactcag
ctggactggcaaagcagaatatctgtgtgtcagtgtacrttttattcatccgtcatttgggtcagggtct
gcgggtgacagacccccaca
>LTR23   Long terminal repeat of endogenous retrovirus - a consensus.
tgagaaaagaaaaaatagctyagagcagtctgagctatgtgaggtatgcaaaatttatcaggcccagaga
gacatgagtatgggacttcagtcatgtccctactccccctcrccatgcccgggggcaattgtttgaaggc
attttgttcctgactagctgcctcatccattatcttcatgttcctggaatttgtgatacaaagaacaatg
tatagccaatcaatagcywatgttattttaatgtaaattyytggtaaacaacttaaggaactscctcttc
tttttttcctttaaaaaccacttgtaactgctgctaattggagtgtatattcagggcaacttgaatctat
gctcccaggttgcagtcctcaagcttggcccaaataaactctctacttatattaattttgcctcagcttt
ttccttttaggttgaca
>LTR24   Long terminal repeat of endogenous retrovirus - a consensus.
tgtraaattaaataattcaaacttaaagctgttggaacttkaaattattctgagccttgagaggaatgtg
gctatgcggcctgagtcatgtagcatgcagctgcaacttctgcttytctgatttagattancttttttcc
ttattcctgtactgtaaatrattaggaagaccaaatggcgccagagataagaccccctcagatcactacc
ccttctcacagaatgataaagyaatcttccttggaatgtagcaakctgtaaccaatcaaatcgctgtaac
atatgcactggycttgtatggaaaatgttgtaatcctgctaaaatttctctgtctctgcctatataagtg
aaaccttaacttctccactttggaacgctgaccccattcctttggagtctgtgtttcctgggtggccatc
ctcaagctttgcgctcgaataaactctatacttaatcatattttctgaatctcattatttaaggttgaca

>HERV23   Primate HERV23 endogenous retrovirus.
[encoded data, 4899 characters]
gaaaaggggggaa
>HERV18   Endogenous retrovirus HERV18, internal part - a consensus.
[encoded data, 6106 characters]
cactaggaggactccctcggcctagggggtgga
>MER87   Long terminal repeat.
tgtaacagtggagggagacctagcatgactgactccatcttgcctctgacccccwgsggtawcatccttt
aggctaaaagcttctgcttaktcctgcacgtaggccaagctaactatgggaggaatttagtttatagttc
aactttaaaaaagatggtaacagtccctttcccaaactaacccccgaggagataaggaaagtatacacac
aaataacaatgttatgttaaagatttataggaacattgtgacctgacctaggacaaagaagttttgmcaa
ctcctcggactcttgctggcgcccagatgtctgtggtcatcggtcacctcctaaccccaataccccnctt
sttccccttcccctagcataaaaagaagcctaagattyatgctnatttgagatggttctttaggacgcta
gtctgccatcttctcggtttgctggctctccgaataaagtcactttccttgccacaacacctcgtctctt
gacttactggctgtcgwgcggtgagcagtaccagctttggattcagttaca
>MER74A   MER74 repetitive element - a consensus.
tgtattaaccatgttttttattttctgtattcttgatgctttgacatctggggccttgctgaccctggag
ggactgcccctcccagggctagccaattcctagagatagcaaacgactcgcctgggagcgcgcctttcat
atgcaaaccaaccaatccagagcccacacccccaaccacctcctttatcgggctctcacactctgggcca
ctatccccctgccctaatcaccccagggccaggtaccagacaactagggacagcccctataccccagagc
ccgctgaaattattcaaactagccaatcctaagcctgcttaccctgccttgcccattccttcccatggaa
accacaataaaggctcttgcccacgttttcccgtcgctccctctgcctcctgaccgaccctggtgcttcc
ccgtgtggccccccgtggcgtggcgtgcccccttctcttgggawctgtgagtaacaaactatcttttcaa
tggcagtcgtctcctgatctgttggccttaccatacctgaataataataaaacctacattttaaaaca
>MER74B   Primate MER74 repetitive element - a consensus.
tgttttcttagattctgtattcgtctatttggcatccgttcatcacagagncanttatattaaccatgtt
ttttattttctgtattcttgatgctttgacatcttggggccttgctgaccccggagagactgcccctccc
agggctagccaattcctagagatagcaaaggactcgcctgggagcgcgcctttcatatgcaaaccaacca
atccaaagcccatacccccaaccacctcctttatcgggctctcacactccaggccaatattccccctgcc
ctaaatcaccccagggccaggtaccaggcaactagagaccacccctgtaccccagagcccgccagaatta
ttcaaactagccaatcctaagcctgcttaccctgccttgcccgttccttcccgtggaaaccmcaataaag
gctctggcccacgttttcccgtcgctccttctgcctcctgaccgaccctggtgcttccccgtggggctct
gcgtggcgtggcgtgcccccttctcttgggaactgtgagaataacaaactatcttttcaatggcagtcgt
ctcctgatctgttggccttaccatacctsaataaaataaaatcccaggtacattttaaaaca
>MER88   Repetitive sequence.
cactgtattgtaaattttaaaaacttcmtattttcctgatgcctcaacatncccacaaacaggctgtgag
caccccgcccaggcgaccaggtgcaccagtgtaataaggctggtccctgctacaagttccccttcttgcc
ttcccctgactgtgacccagtgacattcaaacgcaccagtgaaatccccttacgccttktgcttgtgtsc
tccaccctgacccccagkaaaggcacttgcccgnnngttctctctctccctgcctcntaccngcttggtt
gagcccgctccctgggcactcctcccatccggccccctgcatggcatggcntgcctccctctctaggacc
tgtgagtataataaannctttaanttacgtctctctgagtgcaatttctntggccgtgctggagtgatcc
ttaaagaccccaccagaggnacttccccgtttacaacaca
>MER54B   Primate MER54 repeat subfamily - a consensus.
tgtngtaaatwcttataattttatgttgcctcagcatccattttgaatacaagtttgactttctcatacc
agaagcagggctcagtcacccttgacacggcttttagttctacaccacacccaaatggctcaagccggtg
gccagagataaaaacttggaggcatctctcccgcctggcagactgggctccccactttcccgccgcttcc
tttaaaaagaccattcaggcatttgcccgcnaacttaaagtgaccacaccctgttcccttatatatgctg
ctagctgtcatgctctctctgcctgactcttcattcctgcctcgcgtgacccggggacggaggactgccc
tccngactcattgcaccctccctgtccaggacctgtaagtaaaaatctttgaacttgtttcctattgtgg
tggtgtattgaatttgcgccttccatctgaagaaccaggggctgccccaggctgggttttccccgggatg
ccagggagaanacaaggtcaggctcccagtgccagagcgatggtcaggcaggcataaactggacacgggt
cagacaagagccacaagggcatctgccagtataaacaagtttcccgtgtgagggaccccctggtcgcagg
tcggacaactaggcattaggccgtccgccaggtaaaagaagtatcccgtgaaaggcacactgtaaacacc
cacgtccagctccccttcattttccattagggcagggttgctagctgctctggtactggaaccccaattt
agctgggggctctcaaaaca
>MER31A   a consensus.
tgacaaagattctctgcttgaccaaactttagtcaggctcctgaaccttctcctaggcccatctgtgcac
ttccttgtaaaatccagttttagcaaagaaccctgctaagtcagtttagcmagaaccccccacccttgat
atctgatcaccctcaatatctgatcgggttcctcatcctccaccatcccccaggtgatgtctgatcaccc
tggcctgtcttcagcaagaatcctgttaggtcggtttagccagaatccccctacccctgatgtttcctct
tagtaattttccatccactgacccctcaccctgctccttggctataaattcccacttgcccatgctgtat
tcggagttgagcccaatctctctcccccactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtcttccttaccatgctttaacaagtatcattgaataattttttctttaaca
>MER31B   a consensus.
tgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaggcctcgn
ccttgggccctgtccttggcctgcwtagcccagttttagcaagaatcctgctaagtcagtttagcgagaa
tcccccacccttgatatctgatcaaattcctcatcctccaccatcccccaggtgatgtctgatcaccttg
gcctgccttcagcaagaatcctgttaggtcggtttagcaagaatccccctacccttgatgtctcctctta
gtaattttccatccactgacccctcactctgctccttggctataaatccccacttgtccttgctgtattc
ggagttgagcccaatctctctcccctattgcagtggtctttncacctattgcaatagtcctgaataaagt
ctgccttaccattttaacwagtgtctgaataattttttctttaaca
>MER67D   Primate MER67D repetitive element - a consensus.
tgaccaagacagccttaacgttcccctcagcttgactraactttagacaggtttcttcctgactataggc
ccctgacctcccttttcttagagcatttactttagaaaacttgcaattgtaaattctttctctgcccctt
tgagatgtaaatcttctacaacccaggaatgtctttctcaaggacctgggagccatccctttgaaatata
atcawggaaggacatagggtccctgtctcccagtctctgtggaagggtaggagcctaactttgataagna
gcaattwgcaaacacagatggcctaatcacattgaccaacctccccaccaacgtcctccagtacttttcc
actagctcaccccagcgcttaaaaatccacctgccttttgtttcagnggagttgagttcaanctctaacc
cctattncaatagtctctgtcctttattgcaatagtcttgaatgaagtcttccttgcctgtttaacannt
ttccggtgcaatttttcttttaca
>MER31I   MER31I repetitive element - a consensus.
[encoded data, 4970 characters]
raacaagaggagggactgacaaagattctctgcttg
>CHARLIE1   Autonomous DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgacatcatcgctctgatggctaatggaatgtgtgctt
gtgtattcttgtgttttctaaaatttttaaggtagtaggtttagggtataaatatgtaggttttcagaga
ttaactcagtttsttcttagcacttctaccgtgctcttactagctatcttcagttatacctgctataatc
tttgtaacctcattatcgtccaataaatcattattttraaatcctaaagttttcctcgwgcctatgtgaa
aacacaagaagcaagtactacttgtaaaacttgcttgcaataacattttgaaaatttcccaaatgtttaa
attttatcgacaacatatagaatttaatattttattctaaaataaaaatttatttataawgtttttccta
tatttaagggtggattgttggcttaaaaaagggagattagaagactcgctttctcaacccacagctgcam
catctatgtctaaagatgctgaaatggacataccagcaagttctctgattcctcatggaarggaggaatc
tactccaaagaaactgggcgaaactgtaaataaaaaacaaaaatatgataaaagctatcttctcagcttt
atagatgttaataatttaccttattgtgtcttatgcaacagaacattttcgaatagtattatggtgccag
ttaagttgcggcatcattttgagaccaatcattcagagtttaaagaaaaaggaattaaatattttaaacg
tagatgtgatgagctctttaaaagccaaaaattgtttgttgcagcttttcaaactagaaatgaaaaagcc
actgaagcatcttacaggataagttgccayattgcattggctggagaagcmcacacaataactgagagac
taataaagcctcgaacagttgacattgctgaatgcctgctggatgaaaagtcagtaaaagaaatcatagc
actgccactttccaatgatacgataactcgtcaaattaaagatttagctgcaaacatgaagaccgagtta
atatntcatctgcagaattgtacttttgccttacaaatggacgaatctacagatgtkgctagacttgctg
tgttgcttgcgttcgtctggtatcagcaccaactgatcatcgaagaacttcttttatgtgaattcttggc
aacaaacacaagtggtgatgaaatattcaaagtgttgaatgacttttttgaatctcatgatttatcctgg
aacaactgtgttgacatttgcactgatggtgcaaaagcaatggtgggtaaaactgctggcgccttagcac
gaatcaaggcagtggcaccaaactgtactagtagtcattgtattcttcaccgccacgcactcgcagtwaa
aaaaatgccagtttcacttaagaatgtccttgatgaagcagtaaaaattattaattttattaaatctcaa
cccttgagtacacgtctttttaatattctgtgtgacaaaatgggaagtacgcataaagcacttctgctgc
ataccgaagtacgatggttgtctcgaggaaaagcacttgtgcgattgtttgagttgcgagctgaactagc
tgcttttttcatggaacaccatttttacttgaaagaacgactgacagacaaactatggttattcagactt
gggtatttggcagacattttctcgaaaatgaacgaagtgagcctgtcacttcaaggaaaacaactgacag
tatttgttgccaatgataaaattcgagctttcaagcgaaaattagaattttggaaaacttgtatccgcca
ccgtgagcttgacagcttcccaatacttaaagacttttctgatgagatcggtggtgatattaacgaatgt
gattttttgatattgtataatgaaatgtgtcaacatttggaagatctgcataactcagtgaaccaatatt
ttccaaatgaccaatgcatgatgttacaaaatcatgcatgggtaaaagatccattcaaagtgcaagatag
accaatggattttaatgtaacagagtatgaaaagttcattgatatggtttcagattccacattgcaacta
acctttaagaaactaccacttgtcgagttttggtgtagtatcaaagaagaatatccacaattatctgaaa
aggctattaaaatactcctcccttttccaactacatatctgtgtgaggccagattttcttcatatacttc
aaccaaaacaacatatcgcaacagattgaatgcagaagcagatatgagaatccagctgtcttctattaag
ccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcactaaatttttttgttttgga
aaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggtttattattttwaaatgaat
waataaatattttaaaaatttctcagttttaatttctaatacggtaaatatcgatagatataacccacat
aaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtcctgagaccaaaaagtttga
gaaccgctg
>CHARLIE1A   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactgtgttgacatttgcactgatgg
tgcaaaagcaatggtgggtaaaactgctggcgccttagcacggatcaaggcagtggcaccaaactgtact
agtagtcattgtattcttcaccgccacgcgctcgcagtnaaaaaaatgccagtttcacttaagaatgtcc
ttgatgaagcagtaaaaatkattaattttattaaatctcgacccttgagyacacgtctttttaatattct
gtgtgacaaaatgggaagtacgcataaagcacttctgctgcataccgaagtacgatggytgtctcgagga
aaagcacttgtgcgattgtttgagttgcgagctgaactagctacttttttcatggaacaccatttttact
tgaaagaacgactgacagacaaactrtggttattcagacttgggtatttggcagacattttctcaaaaat
gaacgaagtgagcctgtcacttcaaggaaaacaactgacggtatttgttgccaatgataaaattcgagct
ttcaagcgaaaattagaattttggaaaacttgtatctgccaccgtgagcttgacagcttcccaatactta
aagacttttctgatgagatcggtggtgatattaacgaatgtgattttttgatattgtataatgaaatgtg
tcaacatttggaagatctgcataactcagtgaaccartattttccaaatgaccaatgcatgatgttacaa
aatcatgcatgggtaaaagatccattcaaagcgcaagatagaccaatggattttaatgtaacagagtacg
aaaagttcattgatacggtttcagattccacaccgcaactaacctttaagaaactaccacttgttgagtt
ttggtgtagtatcaaagaagaatatccacaattatctgaaaaggctattaaaatactcctctcttttcca
actacatatctgtgtgaggccagattttcttcatatacttcaaccaaaacaacatatcgcaacagattga
atgcagaagcagatatgagaatccagctgtcttctattaagccagacattaaagagatttgcaaaaatgt
aaaacaatgccactcttctcactaaatttttttgttttggaaaatacggttatttttcataaaaatgtta
tttatgttaacatgtaatgggtttattattttwaaatgaatwaataaatattttaaaaatttctcagttt
taatttctaatacggtaaatatcaatagatataacccacataaacaaaagctctttggggtcctcaataa
tttttaagagtataaaggggtcctgagaccaaaaagtttgagaaccgctg
>CHARLIE1B   DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgtcgcaacagattgaatgcagaagcagatatgagaat
ccagctgtcttctattaagccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcac
taaatttttttgttttggaaaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggt
ttattattttwaaatgaatwaataaatattttaaaaatttctcagttttaatttctaatacggtaaatat
cgatagatataacccacataaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtc
ctgagaccaaaaagtttgagaaccgctg
>CHARLIE2   DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacatgaagactttccaaggggtatgcgggca
cggatagttttaagggaatcaatttccagatcctcarcttccatatgtactctttcctaaaactgatctg
cctgagaacgcgcctgtggcgagggcctgccgnctttcccacttcccctttcacgatcgcccttctccca
ctttacaaaagaaaggcatacctctcacccatcccgaatcttactatggtgcattgccctggggtgtaaa
aacctccggggcaccaaacaaagggacaattcgaaatactggtgttggtgaagcctcctttaatcaaggc
accataarcccgnngtacagttttatgtcttccctggctttayaaatatttctgttaagggtaaagcatg
atgttggaacaaggtactttggcycatgttggggtgttctgaattcagatatatcntagagtggggtggt
gggagtgatgacgatttttncttgacgatgttgcttcttccatcnctattnacaaagaatacattgctcc
tgaggaagagtcctgagagcaaagcaaagagaacattgntaagaaatggcgaagatggcagtgcnttatt
tcatccaggtgacaaactcatggcgaggtctatctatctgakagttggaatattcaagatwtgkaaaagg
cattctgggaaataccaatcngctacgaagcatgcctcctctgcactttcaccattctcagtantgagaa
agagcttggtgagtactctcattcacctgcgtcttagtctgkgtctcagttgcatattttgcatgatttc
aaggmggtggaggcgaaaagctctgcaattacttctaacagatcaacattacattttcaagtaaaaggaa
catatattggaggtaagttmrtgtatkctattttcttgaacatttattcagattmataggagaaacattt
tcattaacttttgccaaagatttctagatagtgtaaatatatttttctatttaggcamaagtctcctgct
cactgtcactcatgaacmacttctctgttcatttattnattcctaccatatacttactagagttagatta
anttaacaggaatatgttgcagattctactgtaantaatgcacwtaatagcagtcagtaatataactttt
gtaaacccatanttattaatgatccaatancttctctctcnttttgctgwcgatttccacaaagtagatt
aaactgtactcttaaaagcagaacattcacttatgtacgagtgcaggacagaatgttccaaaatgcaats
tagaatgcgatgcccwgaacttcagaaaaccagcttcacttaattaggattaatttctcccgctcggang
ctaatatactgttttanttctgtcaaatgnatnattataagtaataatttttnacaataacgaaattant
antatatacatgaatannctcaagtgtccgtccctctgtcatatttttaaaatgcatttngagacgttct
taaaaaatgaaatwtggtattgtntataggtctctgttcgtagtcgakgagamaagtccccaaatncaca
atttacaatttttcgwtttttccaactccttccatgtatattgaggtccataagcaaggtgcctctaagt
gaaagagtagcaggnataattaatagtcatttgataagtcttggtgaagccttttgggtatacttcctag
aaactgagaaagtgaatgactctaatgactgggtaacaaatccttttgcaagtcaggtggtttccaattc
tttgctttcaacaaaattgaaggaggacctaatcgagttgtcagctgacagatcattaaaaataattttt
gatgatagatcaytatgtgatttttggcatataactcggaaggagttcaaagaattgagtgacattgcta
taacaaaactccttccattcccatctacttatttatgtgaacaagrtttctcagcgcttacatctataaa
aatgaaaaataggaatagaattgatgctgaactctgtctcattctagcaataagtaatattcatccacgg
atacatgaactaattggggaaacaaggccccatccatctcattaagagatgcatttccaataaaatttta
ctttttatgtttawtatttatcaaaatttgtaatatgtttatgttgttttgatcaattgtatattaataa
taattgtaatgataactcaatccagaagaaaawttttaacacttagagccttatggtcanarkaaatata
aaaaattaaatttcaatttatatacatatttttgttgcagagaagtatgatagggtgatcaataaaagac
tttcaagcataaaaatatattacattaggataaaattctgtgggggaagtggaatggaaatacgagttca
aggagaaaaagagaacaatgtaaaatttccgactgttaaagaagagcttgctcatgtattttttaaatgg
atgatggtgggtatcaaatcgctatggtatttagattccattggatacatttaaaagagtgatgtaacag
ttttattttaaaatgtcaatatttacaatatgccagaaattacatcctttgcaactatttaaacttatga
tgaaaaattttagatgtcaacttaaaaatgtgcgagggrgtacatagtttttcaaaattcttttagggga
tacgcaagcaaaaawgtttgaagaccactg
>L1MD_5   Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggca
>L1ME1B_5   Partial L1ME LINE1 repetitive element 5' end - a consensus.
cagacttccgcttccggtaatggtggagtaagctcctaccggaccaaccctcccgcagataacaactata
aactctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaccaaaagcaggcagaaactg
gaggggagtcgacacctggaagaagggaatwgcacggagtgagttcccatttctacggctttttgcctga
gagcaggccgcagttggtgcgtcgtacagatggctaaaacwtcagtagaaaacccgcggtcttactggct
tgaagaaccagagaanagaattcggggcaaccacagccactggaaagtgaggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactccaagcagcccagctaaagacaaaagaactgaactgagattggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagytaactgcctactaaaacaaaagaaacaacac
tctttagagaaaaataacagaatccagagtctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmagataagaagaaacagraaaaatgtaatncatccttaagagaaaagaaaataaaaaccg
accctgagatraaccagatgttggaattaacagacaaggactttaaagcarctattataaatatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtcagtgaacttaaagatagatcaatagaagttatacaa
tctgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgtgcgacaatatca
aaaggtcnaacatanatgtaattggaatcmcagaaggag
>MER30B   DNA transposon.
cacgggtgtccaatcttttggcttccctgggccacattggaagaagaattgtcttgggccacacataaaa
tacactaacactaacgatagctgatgagctaaaaaaaaaaggtctgtgcataattttcgtgatatccacc
accacagataagcaaaaaagtccttgcattcaaagggttggacaccgctg
>MER45B   Nonautonomous DNA transposon.
caggaccggctacataatttgcggggcccagtgcaaaatgaaaatgcggggtcccttgttcaaaaagcag
gaaaaagtgccattaaaggtactaaaatataaagctttttcctttcttccgtagtctctctctcgacttg
tcatggtgtttttatatttgctatttaatgtcattctaagtaagaaaaattaaaattttaaattattagc
atgaattttaccattcatctttatattgtgcaatgccagttttaaatgcaaatataagagcatttaactc
gtatgcggaatcaccgaaattacacaatttgtattttatagctcgtacatgcgtatgtatttcgttctta
ccagaacagtggaaacgctgcacaaaactaactcaactgtttttatttcacttcttgatacgcgcacatt
ctaccaacactctctacctttggcttactgatgagtaaggaaggactgaaaggaaaaggaactataggtt
gsccnatctttccctttccttctatgtcatcattttcagcgtaagtggttggctaatacagagaagtaac
acgagtaagaaaggatatgacagggttccttggtcgttcgtgtttcttagaatgccattgccttctttct
gtgttcgaagcaagttctagtttgaatggaaagcgtggcctctcggggctgtcagtgccccgcttactca
gtcgtrgatgtaacacgcttaccttgtacttgctttgagtctcgctgaactcccacgcattgtgggycca
ccggaattctgtgctcatggggcaycgcgaatgctatatgcaaatggggcggcaaggaacggcggacaca
catattgcgcgtatctcctctgctcacacacatgctccattgtcccatcagacttcacttacaaaacaca
agttcaaagataaaattattaagaatttcaagatggcgacagcagagcattaaaccaagcgcggggccct
tctgagcgcggggccctgtgtgactgcacaggtcgcacgcccatgaagccggccctg
>MER45C   Nonautonomous DNA transposon.
caggaccggctacataatttgcggggcccagtgcaaaatgaaaatgcggggccccttgttcaaaaagcag
gaaaaagtgccattaaagrtactaaaatataaagctttttctttcttccgtagtctctctctcgacctgt
catggtatttttaaatttgctatttaatgttcatgctccttcaggcacggggatattcactgggtcagtg
cagaccctcacaggtgcccaggrggcctcaccccacgatttggcacgcscacacggcccaccagctgtta
ggttccccctcctgccagccactgggccgacatgccgtggcctnccgggagcggggaagtcgagccaggc
atctctccttcccacgggcctactgccccagcccaangcggatgggtgattcccaagggactgcaacttt
catgccggaatgtggtmggtgcctggatgagaggtggacgagaggctcgcccccgccaagtcacccgcca
aatgtgctgtggcgactgccagttcagggcaggacagctgtcgccaagccccatcccgagataccacggg
gcatgcgcccaaccctgacccttcttgcacccgcgcccgggccctggttcctggcggaggcarggggcgg
cagtggtcgttgggcaagwctgtggagggagaaggcagggcaggtctggggcaccaggagstaggggagc
gggcggccgagaacccgccccggggaggcggggaggcagcgggagrcgggactgcskgtgagcccaggct
ccaagcccccagcacatgctccattgtcccatcagacttcacttacaaaacacaaattcaaagataaaat
tattaagaatttcaagacagcgaccgcagagcattaaaccccaagcgcggggcccttctgagcgcggggc
cctgtgtgactgcacaggtcgcacgcccatgaagccggccctg
>MER86   Repetitive sequence.
gacttccgtttctagtaatatggtagactagatatcctgaaaacccttccgctacaaaacacctagaaat
gctggataaaatataacaaacatccttttaaatgcatagctgagctcgcaagaaagtaagggaaatcccc
aggggccaaaaatgaagagagaactgaaaaccagagcggtgagtamgtgagctgacgctgtggctg
>LINE2B   3'-end of L2 repeat (subfamily b) - a consensus.
tcccccttgctcactctgctccagccacactggcctccttgctgttcctcaaacacgccaggctctttcc
cgcctctgggcctttgcacatgctgttcyctctgcctggaacgcccttccccwctccttcancctggcca
actcctactcgtccttcaggkctcagctcaratgtcacctcctccaggaagccttccctgacttcccagg
ccgagttaggtgccctcctctgggcccccccggtcctaccctgccactctgggttatmattgtctgtkng
cangtctgtctcccccactggactgtgagctccgcgagggcagggactgtgtctgtcttgttcaccactg
tatccccagcgcctagcacagtgcctggcacatagcaggcgctcagtaaatgtttgttgaatgaatgaa
>LTR25   Long terminal repeat of endogenous retrovirus - a consensus.
tgagaggagttaactaacttgccttaggtagacagcaagggaagggtccctggagagcccctgacccacg
ggtcagtgcctcatccccacataacataaaaaagcagcctgggaaaaaaaatcaagctgcaggcaccaat
aagggaactagcacagggggttgtgcctggagacatgcccacggctgcacagataggagaacctccagcc
cattcagataaaaacttacacaaacctccggctcactcagataaagaaacaaggcctgacataraaatgc
ctttgtcctttgtataatcagcgggctcccaggaaaaagtttcttctccttttgtgggcatgaacacagt
gggctctggtgggttccggtggacactttcctttcctttttttggactgtaagcctggcctctatgaatc
atcacttcagctcctgattgrtcccgggccaaggtcctgggccaaactgagtagccnctgtgaatcatca
cttcaactyctgattggtcccaggccaaggtcccgggccaagctgagtcacacgttctccaagacagccc
acagactaaacacattccttccccttcccagtccataaaaaccccagaccccagcctcatagkggrcaac
ccattcgggtccccctctccgctgrcagagagctttcttctttcacttattaaactttcactccaacctc
acctttgtgtccacgctccttaattttcttggaggtrrgacaaagaactctgggtaytatctcagacaat
gagagactgctacatnttggtgca
>LTR26   LTR from human endogenous retrovirus-like sequence.
tgaaaccgtccctataaactttataaaattaatcagggaagaagrgagggggagaaatgaaaataaacca
agcttgcagcacattcagcattaatcatkaggtcagcttgctctctgacctgcttcctcatagttgtttg
gtgcctattgcctyagaatcacgtagaccctgttacaagattatagttccccttaactgctctatagata
acaacttgaacattatgaaacgttaagttttccctttgagatattccttcgggtcctgcataccgatgaa
actactgacaactgacgycagctggtctgaaggaccccacgaggagctgactcaccaaagaatgcagttt
ccacatcctgatgatttcatcccccttaccccgaccaatcaacaaccccaattttccagcccctcgccct
ccatgatccccttaaaaaccccagcccagaactcctcggggagatggatttgagggtctcctcccatctc
ctcgctcagtgccctgcgatcattaaactctttctctgctgcaaaccctgctgtctcagtgtaattggtc
tgttactgcgcagtgggcatatgaacctgttggtcctataaca
>HERVK9I   HERVK-related endogenous retrovirus. It is flanked by MER9 LTRs.
[encoded data, 5964 characters]
tcaccgtgacaaagccgcccttgcttttatctctttgcaaatcaaagaagggagaca
>HERVH48I   HERVH-related endogenous retrorvirus flanked by MER48 LTRs.
[encoded data, 5183 characters]
tagacaggaa
>MER11C   LTR from HERVK-related endogenous retrovirus HERVK11.
tgttgcgggaagtcagggaccccaaacggagggaccggctgaagccatgrcagaagaacgtggattgtga
agattttatggacatttattagttccccaaattaatacttttgtaatttcttatgcctgtctttactgca
atctctaaacataaattgtaaagatttcatggacacttatcacttccccaatcaatacccttgtgatttc
ctatgcctgtctttactttaatctcttaatcctgtcagctgaggaggatgtatatcgcctcaggaccctg
taataattgcattaactgcacaaattgtacagcatgtgtgtttgagcaatatgaaatgtgggcaccttga
aaaaagaacaggataacagcaattgttcagggaataagagagataaccttaaactctgactgccggtgag
ccaggcagaacagagccatatttctcttctttcaaaagcaaatgggagaaatatcgctgaattctttttc
tcagcatggaacatccctgagaaagagaatgcgcacctrggggtaggtctctgaactggcccccctgggc
gtngcctgtctcttatggtcgagactgcagrggtgaaatagactccagtctcccatagcgctcccaggct
tattaggaagaggaaattcccgcctaataaattttggtcagaccggttgatctcaaaaccctgtctcctg
ataagatgttatcaatgacaatggtgcccgaaacttcattagcaattttaatttcgcctcggtcctgtgg
tcctgtgatctcgccctgcctccacttgccttgtgatattctattaccytgttaagtacttgatgtctgt
cacccacacctattcgcacactccctccccttttgaaaatccctaataaaaacttgctggtttttgtggc
ttgtggggcatcacggatcctaccaacgtgtgatgtctcccccggatgcccagctttaaaatttctctct
tttgtactctgtccctttatttctcaagccagccgacgcttagggaaaatagaaaagaacctacgtgatt
atcggggcaggtcccccgata
>MER11D   LTR from HERVK-related endogenous retrovirus.
tgtagggagaccccctgaaactattgctacggaataaaagatgaaatgctcctgattattgtaaatacaa
aattgcatgcaggattgtgtaaagacaatgccaggttggactgccagaacgagccaacagcgcgtgatgt
gcttccccctgcagagagcctatgaatggacgtgcagtcagggaggtttcacatcaccaagattcctatc
ccagaaaagcagatgttcatagctctgggaatggaatgcgacccttgtggagagcctataaacggacgca
tggggggcgcctgtccatatggataagatagggctataaacgccctcatcttgccacggctcttctaggc
ctctttagggttaaggcatactcccttctgagaatttctggtctaaccggttgtctagcttcacgtcctg
tttccatggattgtttgtaaccagcttttgttgcaattgttactgctgattaatatcttgctaatcatag
gttatggaaagaytgtgtttctgttttaaggctctgttagaaattactgacgcacacactatattgtaaa
ttcttatctctgtatactgtacttctacatacaaatgtactgtacttctacatacaaatgttatgttaaa
gaattacttcatccccatgtgaccatctcacctcataatcaaatgaccctaaatccctcactaacctacc
cccgccctcactaaacttaataataaatgctggtatatccagtgcattgttggcaccgtgggaccagaag
gcggtgacccccctggacccagctttcactatcttgtgtgtgtctattatttctcaacctgccgatccgc
ctaggagcaaagagagagccccgttgcattgcgggctgctggccagatcccgcaata
>LTR10D   LTR from endogenous retrovirus.
tgtgggatatgatgaggtttctcttcaaataacctgatcaatcttttattctttaattcatagtaccccc
ctccctycttttttcytttttctccttttttcctttttgcctttgttagatgcccaggcacgccacagta
ccaggcgttatcaataccagctcacattcctttccttatttggaaaaaagactaactttctagctcatta
cagacaccccttcccctttcctctccgctttcttttacgtgcccaccttatctaaaaaaaaatcaaatgt
ttagccaaccgggattagtttagattgtatgacccaaccccagccaatggggaaagggtacaagggcagg
acttgcatcaraaataaaggctctcgtgcccctttgttcaggtgtgctctcatggcgactggccaaggag
aagcacccctctgcgcagaagtaaaattgctttgctaagaatcctttgttcgagtgttcaatttccttag
gattttgagcgttattcctaaca
>LTR14A   LTR of human endogenous retrovirus.
tgggagaaaagctgagtgttgggagagaagctgaggcagggcttgcatgtctgctagacttgctggctcc
ttgcttctagcactcccattatctcaagcagccatatgtttctcattcacttgatacactgtttcctttc
aacccccacatcctcaccacctgtttctttgtttgagcaccaataaatagcgtgggctcccagagctcag
ggccttcgcagcctccacactcgcgatggccccctggtcccactttctctctcaaactgtctttttctca
ttcctttgactccgccggactttgtcgcccccacgacctggtgttgggtctgatcaccccaaca
>LTR14B   LTR of human endogenous retrovirus.
tgggagaaaagctgagtgttgggaaaagctgaggcagggcttgcatgtctgacataatgtaaaagagtct
tggaacatgtccggggtccagggtctaaaacccctcgtggcctttggaacaccaagctctgtgctaaagg
gtggaaggctaccctgacgcaccataatctaagcccagggcataaaacccctcgtggcttggatagaatc
cagggctcgtggcctctggaatgtgtctagacttgctggctccttgctccttgctctcccaggatcgatt
gtatcttgagttaaaagaacctgctctccattatctcaagtagcagaacatgttccatatgcctcaaagg
aaatgctaaaccatcacagctgtagatcatgcgcttaatgcaacttgccctttcgacccccacattctca
ccacctgtttctttgtttgatcaccaataaatagtctgggcttccagagctcggggcctttgcagcctcc
atacttagcgttggccccctggacccactttctctctcaaactgtcttttctcattcctttgactccgcc
ggacttcgtcacccccacgacctggtgttgggtctgatcaccccaaca
>LTR27   Long terminal repeat of endogenous retrovirus - a consensus.
tgtgagagcagcaggaggcagccaatgcctaggtaggcaggggcaggtccctgtgaaacctcacctccag
gccgaagacagcttaaatcctgaaagccaagctaccatttaaatccttggaccagactgagaacttgtct
tcctgtttggtgtgctttcctctgattgatccctacccttcacctattttatgtatacctaccctttcct
aattggttttctgtactgccaggcccacttctgcgtggtgtctttgctttaaccttttttgcatactcac
aaaccaatcagcatgcactccccattctgagtccataaaaggccctggacccagccacatgggggacttt
cctgccttcaggtagggggaccacccctgtgtcccctctgtatttaaagctgtttcatcattcaataaaa
ttcttctctgtcctcctcacacttcaatgttcagtgcatcctcattcttcttggatgtgggacaagaact
tgggaatcagtgcacaagccagacttggcctgggaaggccaactgggcagggcacctcctgcggcagata
gcatgccctgggcaaggcctctggcatcgccagccagaagtccctgactggcaaagggaccgagaaaaat
cctgca
>LTR28   Long terminal repeat of endogenous retrovirus - a consensus.
tgatagcgacaggaggcagmcaaatgcctaggcagataggggcgggtccccggtgaaaccccaccttcaa
gccaaagacagtttaaagcctgaaagccaagctacaagtcccggataaatcctcagaccggaktgagaac
ttstcttcctgtttggcgcgctttcctctgattgatccccacccttcacctattttacatatacccaccc
tttcctaattggytttttacactgtcttgcccaccttcgaatgttgyctttkttttaaccttttttgcat
actcacaaaccaatcagcacgcactmccccccatcctgtgcctataaaaaccccagactcagtcagtaga
ggagangacagcttgacttcatasttggnagaagrattgggagagagacaacctgacttcagggaagacg
acctgcccttcccgtcccctctccagctcccctctccactgagagccgctttcatcactcaataaaattc
tccgccttcaccatccttcaattgtcagcgtracctcattcttcttggacgccggacaagagctcgggac
ccaccgagtgcgggtacccaaaaaggctgtcacactggccctttgccctcgctggcggagggcagccgcc
ccacatgacagaagcagcggcggggctgagccagccchagagccaygggctggagtgaggcaaggggccg
actgagctgttaacacgcatccgtctgcagacggcagaactaaaagagctawttagcayactgtaacacc
ccctctggggcttcggggtcgcgggcayccytacctgggtgctgccgcattcccctccaggtgacatgcc
tggtctggccgcaggccctgcacagagcttgctcctgtgccggtgcccgaagcagccggccagatcccgc
actcgctcgctcgcgtgctccctcccgcaaggggytgagcgbggcgggctgagtagacggggcacccctg
ccatgagtccggtgaaggggycaagaaaaatcctgcatca
>LTR29   Long terminal repeat of endogenous retrovirus - a consensus.
tggggctcagaaaccgataccccaaaatatggcgttttgwacatgctgaactgaagaagcctcaaggttt
ctctgacctccccccanancccccactgtctctcccnaatataagttgaagttcccttatctgcctaaag
tccagacccaccaaggagaacaattgttttttgttcccctccctgagtttatctcattngaatctattrc
aggaaagaagaccaaagaatgtaaccacacctgaacagaccctttttcaagataatgacttttgtcacaa
aycattgtctccaaggatcatttaaattccaaagagaactatttacaagttaatttctgttccyysatcc
aagatccawtcattctccctagtaatcatttattgcccctcaatagaattcctcttctcccccttcccat
aacctgttttaccaggatccaagcccccattctttctgtaacctcaagatggtatataagcttctgyacc
tcattgggaagttgggtcttcattctgaaggctcccatgtatacacgttaaataaatttgtatgcctttt
ctcctaytaattaatctgccttttgtcagttgatttttcagcaaaccttcagagggcca
>LTR30   LTR from human ERV9-related  endogenous retrovirus.
tgagaggaggtkccagctgggcttcctgggtcgagtaggggctcagaaagctgtgaaactcactcatttc
ctgcatcaggacttacttcggtcctggatgaataatattgaagatatatgcttaaaatattcctaacayc
aggatttgtgcatgtgttttcttccccaagaaagctataaacagcaaaaattttgctgtaagcttccctg
tgtccttctctccctctctcccttccccctcccctaaaactaaagtaaaaggaatgttaaaagcccatta
ttttctgtgaccagcagaccttatctatgctcccaattccaattccttgtaaacacactttgtaaartcc
tgtragatcctgtctcctttgccatgccgctgcaaggtyataaagtagataaaacytaagttrcaattcc
ggttttcctcaagatctaagacatgtcmcaaaataatttactgyctttgtttcttgctctggtaacatct
tcccgccgcacgtatttcccgccttaaagagtttaaaaggcgatcaaacaaatctaacactggctacccg
ctcgggaccccttccacgctgtggaagctttgtactgtcactctgctcaataaagcctacagcttttttt
ctctcttggtccgatccgtgtctctcwctcgccgcgggcwgccgccacaccaaatctttggcgtggctaa
ggcaagaacctttggcgttaca
>LTR31   Putative LTR from MER4I-MER41I-MER57I-MER65I group.
tgcttgcttttggtcacttgctttgtgttatcgttnttattkttttcctttttccatgaagctgaaggcc
gcagtagctgaaggccttgccgctgaatgctgaaacttaaccttcactggctactttatagataacattc
ataggtcaccacggtaacggttgcttacagttgtttttcarggaactkgggccagctcctgtccagttca
aaccggttgagaccackaacccttcaactgggcctgcgcaagtgcccaagaggtggccttttgacgtcgg
agggccaaaaactccaccctcagatcacgctaacgccaccattttctgtacatgtgtcctatgaartgcc
atgaagcccgactacgcttgcgcagaatgaacctrttacttcatttttccccactgccaatcacctttcc
ccacaccttagaccaccccgcttctctaacccataaatatccctaagccttatcttcggggaggcggatt
tgagagctgttctcccgcctcctcgcttggcggccttgtgaataaatcttttctcttttgcaaaacccat
cgtcacagtgattgrcttactgcgcgcgggcagaacggacctggacctggccagtaaca
>MER61B   Primate MER61B repetitive element - a consensus.
tgatagagacaggaggcagccaagggtcccccggtgaaaccccaccttcaagcctaaaacagcctgaagg
ctgaaaaaccagactgctggtcccggatgaagcccaccctttcctgactgattctctctgaataatgccc
acctgcgcactgggaggacggggtggagccacgggaagttcgtgccttgtgcagnggggaggagcctggc
ctcttctgttcctgtgtggtggcctggggttcaatctgtgaggtgggagcctgttggcaggactccctct
cgctttgctgagagttgtttttcctttttccttttcgcccaataaattctgctcctcacccttcaatgtg
tccgcgwgcctaatctttcctggtcgtgtgacaagaacccagttttagctgaactaaggagaaagttctg
caaca
>MER61C   Primate MER61C repetitive element - a consensus.
tgatagatgcaggaggcagataagggagggtccccggagaatctccgacccgccccacaagtgtttacat
cagatgcttttgtgcagatgagggaacctgcccagggccttgtctgggcatgcccacaacgaactggggg
gcccacctgcgcactgggagaatggggtggagccaccgggaagttcgcgccttgtgcagcggggaggagc
ctggcctcttcagttcctgtgtggtggcctggtgttcaatctgtgaggtgggagcctgttggcaggactc
cctctcgctttgctgagagttgtttttcctttttccttttcacccaataaattctgctctcctcaccctt
caatgtgtctgcgtgcctaatttttcctggtcgtgkgacaagaacccgggttttagctgaactaaggagc
aaaatyctgcawca
>MER92A   Primate MER92A repetitive element - a consensus
tgaccaagtgttcacagttgttcgcttcttaccctctncttcgccttgacagaactttagtcaggcttct
ctccttcctacaggcccctgaactttgcttgcccctaagcctgagcaagcactmaaatgcagaacgtgcc
ccccttakcagcttgtcctgagaatcggctgaccacagcgggacacatttcctgtcaaaccccaccnatc
atgttgtntgctcgntccccctcgcttgcccactgtcycctttctactggttctgcttaycyctccctat
aaaagaaaagcctttttctgtttgattttgagacgcttgcaagttcctgaggtcggagcgttctccctat
tgcaatagtctttttgaataaagtctctccttatctaagtccggatttgtttttatttgaca
>MER92B   Primate MER92B repetitive element - a consensus.
tgacaatgttgaactttacctgagccctgtgctcctggaaaacagtgawggttaagaaatccccccatcc
ttttgtgttccgggaaacggcttactgcaaagaaccatccttccccatatgacttagataagactcatgg
atgncccccttgtttacctatgacaaggccagacacagaccctccaaattcccattctttgcctcataaa
tgattagctgaactgtttgtccccactgatcaatckggacaaaatacctgytaactcgactngaccaaac
tttagttaagcttctctccttcctccaggmccctgaactttggaccaccctcagcctgagccagcatcan
aatgtagaacagcccctcctgagaataggctgrcctcaaggtaaracattctctgatctactctgatctc
gccaccctttcatcccactcccccacacctggttctttctagccttgtttactcctccctataaaagaaa
agccctttctgcctgaactttgagatgcttgcagatcttatggtcagagcgttctccctattgcaatagt
ccccytccccccmttgcaatagtccttttgaataaagtctctccttagctaagtccggatttgtttttat
ttgaca
>MER92C   MER92C repetitive element - a consensus.
tgacaatgcwgaactttacctgagccctgtgctcccggaaaacagcgatggttaagaaatccccccatcc
ttttgtgttccnagaaacggcttaccgcaaagaactacccttccctatatgacttaaataagactctctg
ncccttctttctcacgacttccataagatcannnatgattccttncctgnnaagaccaaacacagacctt
tccccttttgcctgaacccgctgacaaggccagacacggaccctccaacttcctattctttgtttcataa
atgattagctgagattagaagngtctgtccccctgaaactagctagacacagagataaacatttcctgtt
cagctaaccgagacttcccctgattgcaaaacaaccccccctgtaaatctccccacntgaaacctatcta
ccccttcctataaaagtccaaggcaaaaccaccctgccgagacacttcatagtcttcggatcttggatgc
tctccctattgcaatagcctgaataaaatcatctccttamttgtctagtgcattttgtctttca
>MER93   Primate MER93 repetitive element - a consensus
tgttaaaataattaawtgggaggccattagactgaggtggctctagcgccctgggttcctacgtaagcaa
accgaaacctaactcagncgtttcttanaaataactatnaagaraaaatgaaacttaagctyagccaatc
acaarcsgccaactaacctctgattacataaccagggacttcccacctggacagtccaaatraggngact
gcncaactgtaaccaatcaaatactttatttgctctgcttcctcatncaccytataaaagcctttccttc
aagcccctccggcggagccccaaaccacccgtggtctggggctgcccgattcatgaatcactgtttgctc
aaataaactctttaaaattttaatgtgcctcagtttatcttttaaca
>MLT1H   (MLT1h subfamily) - a consensus.
tgtggtagntgattgcaaaaatgacmccattctccacccctccctgtatccatgccctttgcaatgtgac
tttgcagctcctcccatcaagaggcggagtctgtttccccaccccttgaatctgggctggccwtgtgact
tgctttggccaatrgaatgckgcagaagtgacggtgtgccagttccgagcctaggcctcaagaggccttg
cgtgcttccgctcnctctcttggaaccctgccaccgccatgwgaacaagcccgggctagcctgctggagg
atgagagaccacgtggaggagagccgagscgccccagctgaggccatcctggacmggccagcccccagcc
aagatcagcagagccaccaantcaaccagcagctgaccacagatgcatgagggagcccagctgagaccag
aagaaccgcccagctgagcccagcccaaattgccgacccgcagaatcgtgagctaaaataaatggttgtt
gttttaagccactaagttttggggtggtttgttatgcagcaatagctaactgataca
>L1P_MA2   LINE1 subfamily consensus; L1PMA2 subfamily.
[encoded data, 7739 characters]
tctcatgtaccccataaatatatacayctattatgtacccayaaaaat
>LTR32   LTR from human endogenous retrovirus.
tgtcnataaccaagtgtatggtagacgcacctgacagcaataacttaagcataccctgagaatgaccctg
tatggcagatgcacctgaatgtgtgtttggagttctgagctaaggaatccgggagtggccaacccggaga
ttcattccttatctatgaggaacatctgagcccccggcccgtcccgtggaacgcaggccatacaggggat
cgaggccctttgttttgggttaaatgaaggttgccaggtggaggttgttagggggagggtgctaagtgaa
aatgctatataaactgcatgctttttrcaagcggttgcggttctcctgtccagcccaccaccactggact
gtcttccctgtatgtaagtccccaataaaccctatgtctcatttgctggctctgggtctcttcttcggcc
tcttgaacctggtgccatccctattggagtcaataggggtccggcacaaca
>GOLEM   Autonomous DNA transposon; POGO superfamily.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagtatg
ccgtgttagaccggcagcagccacatgcatctcgtgtttaccgcgtctcttgattgcatcattttctctt
gtgcttgatttaatctcatgtgttttgttcatcacggctcctaagcgttcaaaatccacggctaatgttg
ccagtaagaggccacgtcgagtaattgagctggaaacaaaattaaaagtgattaaggaccgccgaaggtg
gaaaatcagtgatggttattgctcgccagacaggtatgtcccattcgaccatagctgccaccttgaagaa
caagagcaaagtgacagaaactgttaaagggtctgcttcatcgaaggcgacgagaccaacaaatttgaga
agtgccaacatcagatatggagaatatctgctaatgacctggattgaaaaccagacacagaaacatagct
ctctcagcaccacgacgaccacggccagagcaaaagggatatttttgatgttgaaagaaaaggctggacc
cgactgtgatatcgaatttactgctagttccgggtggtttaaatgattcgagaatcgttatccattacat
aatgttaacgtgactgctgagtctgtgagggctgacgtgaaggcagctgaagagtttttggaaactctag
atgagtcgtggagaagaaatacttgccagagcaaatcttcaatatggaggaaacctccctattctggaaa
cagatgcctgaaaggactttctgtcataagggggccaagtcaatgccaggtttcaagggttttaaggaca
ggaaacggtcttgctttggggcaatgttgcaggctacaaattgaagccctttgtgatccgacacagtgaa
aaccccagggccttcaagcatatcagtaagcacacgctgccagtgtactacaggagcaataaaaagtcat
ggatgatccatctcctcttccaagatgccctcctgaattgctatgccagagaaatggagaagtactgttt
ggggaataacatacctttcaagattttgcttattgttgataatgctcctgcacatcttccttttactggt
gatcttcatcccaatttcaaagtggtgtttctctctccaaacaccacctctttgatccaatggatcaagg
aattatagcagctttttaaaggcctactaccagagaagggccttcgcccaggttatcactgtaactgagg
aagacactgatgcaattctggaaggattacaacagccaagactgcatcaagaaccttgcttgggattggg
gtgatgtcaccaaggagtgtatgaatggcatctggaagaagacactcaagaggtttgtccatgacttcaa
aggatttgccaaggatgaggaggttgcaaaaatcaacaaggctgtggttgagatggcaaacaactttaac
ctgggtgtggatgaggatgacattgaggagctcctagaggtggttcctgaggaattgactaatgaggagt
tgttggaactggaacaggaatgcatagctgaagaagaggcaagagaaaaggaaactgcaggagaagaaga
agaacccccaagaaaattcacagtaaagggtttagcagaagcttttgcagacctcaacaagctccttaaa
aagtttgaaaacatggaccccaacaccgaaaggttttcattaatagagaggaatgttcatggtgcattat
ctgcttacaagcaaatctatgatgacaaaaagaaacaaaccaagcaaaccatcatggacatatatttctg
aaaagagtgacacctcctcaagaagagcctcaggcaggtccttcaggagatattccagaagaargcatcg
ttatcataggagatgacagctccatgcatgttattgcccctgaagaccttccagtgggacaaaatgtgga
ggcggaagacagtgatattratgatcctgaccctgtgtaggcctaggctaatgtgtgtgtttgtgtctta
gtttttaacaaaaatnttttaaaaaataaaaaaatwaaaaatttwwaaatagaaaaaagcttatagaata
aggatataaagaaagaaaatatttttgtacagctgtacaatgtgtttgtgttttaagctaagtgttatta
caaaagagtcaaaagttaaaaatgcaaaagtttataaagtaaaaaagttacagtaagctatggttaattt
attgctgaaaaarwwwwwwwwwwwwwataaawttagtatagcctaagtgtacagtgtttataaagtctac
agtagtgtacagtaatgtcctaggccttcacattcactcaccactcactcactgactcacccagagcaac
ttccagtcctgcaagctccattcatggtaagtgcyctatacaggtgtaccattttttatcttttataccg
tatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattgcctacagta
ttcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatagcctaggtgt
gtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaattgcctaatg
acgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>ZOMBI   Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>ZOMBI_A   transposon - a consensus.
caggttgagcatcccaaatccgaaaatccgaaatccgaaatgctccaaaatccgaaactttttgagcgcc
gacatgacgctcaaaggaaatgctcattggagcgttttggatttcggattttcagatttgggatgctcaa
ccggtaagtataatgcaaatattccaaaatccaaaaatccgaaatccgaaacacttctggtcccaagcat
tttggataagggatactcaacctg
>ZOMBI_B   transposon - a consensus.
caggttgagcatccctaatctgaaaatccgaaatccaaaatgctccaaaatctgaaactttttgagcacc
aacatgatgccacaagtggaaaattccacacctgacctcatgtgataggtcacagtcaaaayacaatcaa
gactnnncnagcnnctncngttgctnttnctgccagncaacnacagnttgtgcacctngntggcaragan
actgacacatttgctttctkatggttcagtgtacacaaactttgtttcatgcacaaaattatttaaaata
ttgtataaaattaccttcaggctatgtgtataaggtgtatatgaaacataaatgaatttcgtgtttagac
ttgggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaatctgaaatc
caaaacacttctggtcccaagcatttcggataagggatactcaacctg
>LTR33   LTR from endogenous retrovirus-like sequence (HERVL33).
tgtgctggatatcttctgtttgcccctccagatccactctccacccttctccaccctgctctgtgccccg
ggaggctgacctctatggactgcatcamcgggctcccttgccctctggcttctggttgggtttggccaat
gggaggcactggcaggagattggagggtggaaggagagwgagatcggggtatttattccccyggctccct
ccctgctgggctgcggtttggcagtggctgcgttcctctaccgaaggccacagctcctgtcgggcagccc
tctccttgtagctacagctmcagctctctctgggttccggtaacmgctccctccccttgccccttcaggc
ctaggggtggtaacagctycccgctgttgctagccccggggtgcttcaccatcccttgttggtttccctt
aaccctgcccacacctttgtaaatagtcccttcattaaactctcctcaattactccatttgagtgtgcca
tctgtttcctgccgggaccctgactgataca
>L1PA12_5   Primate L1PA12_5 repetitive element - a consensus.
ggaggtggccaagatggccgactagaagcagctagtgtgtgccgctctcatggagagaaatggaaggggn
gagtaaatacagcaccttcaactgaaacatccaggtacacgcattgggactaatcaagaaaacaacttga
cccatggagaacggagaaaagcaaggcaggacgacggcccacccgggagcgacacggagccaggggagcc
tcccccgcccagggaagtggtgagtgaatgtgcggccccgggaacccacgcttctcccacggatctttgc
aaccctcaggtcaggagatcccctcgtgaacccactccaccagggccttcagtctgacacacagagctat
gtggagtctcggcagagcagccgctcaggcatgcgtggagaccctggagccttagatacccgggcttccc
ggcaaaagtagctgcaactccagcaaagcgggaggttagacccccatacatacccctaggaaagaggctg
aatccagggggccgagcagtgayagtctgcaggccccacttccacrgcacctcacaggataagacccact
gacttggaatttcagcyagccacyggtagcagcgttgcacctmcctgraacrgagctcccagggggaagg
ggcgggctgccatctttgctgtttgggcgacttagccattccagccttcgggctttggagagtccaagcc
aactaggggcagaagsgatcccccagcacagmmcagcwgctctaccaaaacrtggccagactgcttcttt
aagtgggtccccgatcctattcctcctcgctgggcgggacctcccaaccggggcctccagccacccccgc
tggtgttytctagccgacagagatttgtaattctccctgggacggagttcccagagggaagggcgggcca
ccatctttgctgtttgrgcggctcagccgttccaaccttcgggctttggagagcccaagctgaccggggg
cngaaggaatcccccagcacagcacagctgctctaccaaaamgcggccagactgcttctttaakcgagtc
cccgatcccatttctcctcactgggcgggacctcccaaaccgggtctccagccacctcctgcakgtgttc
tcnggctaacagagatttgaaccyccctgggacgragctyycagagggaggggcaggcygccatctttgc
tgtttsrkarmcttmrctgttsawaccttcaggcwytggaraattyaaggcgacyagggkctrgancgga
cccccagcacagyacagcwgcyctaysraaawgtggccagactttttkttaagtaggtcccnaatcccnt
wtctcctcactgggtgggacctnccaaccagggtctccagccacctcctncaggtgnttttgggctggca
acaggtccgtacctccctgggacgaagctcccagaggcaggggcaggctnccatcttcgctgtttcgtag
ccttcactggtgatacctccaggtactagaaaatncgaggtgactanngactggagcgggcccccagcat
attrcagcagccctacggaaaagtggccagactgttatgtgggtscctawtcccatatctcctcactggg
cgggtcctccaggcctgggtctccagccaccacyyaccggggctgtcgngccagtaccarctcwgcaact
ccctggacagagccyccaggggaaactgaaagcctctctgccactgcctctgcagtggaactgcccttgc
taccctcagactaacgaaggagsaaagaccctaagtgccttatccacacctccaacaagctgcagtcgac
ccaaggagaggaggccagtctgtctcycacnggtcccacmcaccccccacwgcttgtcaccasrcaggra
acccctggcttgggcccacagcacagaccctccatcctgggctgactgcactgagcgattgctgacctgc
atctctctggggtggagcccccaggagacaagcaaaagaccctcggccacaaccactactaaggtccctt
cctccgckgcctccaagttggggagaaaacataaaccctgagatcaccccagagctgttatgngcagccc
ggnagtgccaagntacgatctacagccagcactcaagtgngagaggagnccacactttcatagcattgag
agggaacanggctgcaaangtgaggaaatacaggggagccacacgactgagcaagagcctaccaactgac
cactnnanctaagngtcacctactggatcacgccctaaagcttcaagaccaaaagtacttcacaaacata
gccccctgtgaaacaagagacaggaagtaagcttcaaataaagaccatgcacaaagcctcagcccagtga
aaacatccaaaaaggaagtctattgattgtattcaatgcacactgcagttaaaggaanatccacanacag
agatgagaaagaaccaacgcaagaactcgcgtaactcaaatggtcagagtgtcttatgtcctccaaacga
ntgcatagttttccaacaaaggttcttaactaggctgagttggcatgaatgacagaaatagaattcagaa
tatggataggaacaaagatcattgagattgaggagaatggcataacccaattcagggaaactaagaatca
caaaatcatgataaaacgatacaggagctgaaggacaaaatagctggtataagaatgaacctaacaaata
catctgatagagatgaaaaacacactacaagaatttcacaatgcaatcacaagtattaatagcagaataa
agcaagctgaggaaagaatctcagaaattgacaactggctctctgaaataagacagtcagacaatcacaa
agaaacaagaataaaaaggaatgaacaaaacatgcaagaaatatgggattatgtaaagaggccaaatgta
tgaacgactggcatcactgaaaggatggaggagaaagcaaacaacttggaaaacgtatttcaggatatcg
ttcatgaaaacttccgcaaccttgctagaaaggccataagtcaaactcagaaaatatggaaaact
>L1PA16_5   Primate L1PA16_5 LINE1 repetitive element - a consensus.
tttttttcccaagatggcggattagaggcttttagtatgcctcagccacttggaaatggnaaaatagtgc
ataaagatcaactctgtgagctttaattcaagaaggaaaatgggaatccaccataatcgtgaaggacacc
ccagatcctagggaggagaatgtnggcaaacagcccctatgatggcgtccagctgataaaagtgagtgaa
gccccagtacgcgagagaggcagagagtctccctctgtgactcacttttccactggggatccgagcaacc
caggccaagggagaacactttgtttctcccaagccctggagctaacgtggggagaggcttggagatgctg
tgagggaaagacaccgggaaaagctgcagacattttcccagacctaggamcaagagcaggatgccatttt
taatccgggcgcatacaaagtcagccattctttggcgacccggcagcgtggccgcgcaggcattttagtc
tcaggccagagattggagcgcctgctctggagtagggtaggggcctccacagccagaactgtgaaaagcg
cctcagcagtaggcgctggaattgtgctctcccctactgcaagcctggggcgggaggagagctgctacag
ctgcagtttctcctgggcggcgagacttgcagccagggccagcttggcgacctggaactggtctgtgtgt
gccattgctgggtgccccagcctgctcccctgagatcgtggtgcagsggggccctctctgctccacgccc
aggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagccgccccacccttcctg
kgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctccaggcattcagagcac
ccgctcgcctggwtcagcagcctgagccgccccacccttcctgkgcatagatcgtggtgcagsggggccc
tctctgctccacgcccaggcagatctccaggcattcagagcacccgctcgcctggwtcagcagcctgagc
cgccccacccttcctgkgcatagatcgtggtgcagsggggccctctctgctccacgcccaggcagatctc
caggcatctggagcacccactctcctggattaggagtttaagccgccccacccttcccgtgcagagaact
tggggctgaggaggtttccctgctccacgcctaggcacacctctgggcgcttggtggctgcccactggat
tctcccttggcgctggcgcttgtgcccgccatcgggagatctgtaggcggacctgcctagtccggcccca
cccatcttggmccccgcccctccagggctgagcagrsagttcagancactntgcattccatgcatcagcc
cattkcctgaggcaacagagagcttctnccagtaaacaaggatcaaatatatacccagccacactggccg
tagctagctcttacctataagcgccatctactggcttgtaggtcaaactgcacwgcccaatataaaacct
gctaaaagaagtgcatagggctatagaagcaaagccaaaagaccatacccagcattctctacagtcacac
cmcctagggaggaggagaaaggaaagggaaagaaaaaacaccaataatattatagggaaagaaagaaaag
aaaaaaccctactcncatggaaataattacaaaaattagaagtgccagnatctccagatgagaaggaacc
agcacaagaattntggcaccatgaaaaatctgaatgtagtgacaccaccaaaggatcgcactagctctcc
agcaatggttcctaatcaaaacggaaactcagaaatgacaggcaaagaattcaaagcatggatt
>L1PBA_5   Primate L1PBA_5 LINE1 repetitive element - a consensus.
acaaantagggaaaaatggcggataggaggcaggactaaattgcagctcccactcggatggacagagcag
catgtggagactcacatcgtgaacttttgctccaagaaccaccgcaggaatataycaagaaagccgagag
aatycacagaccctctgaaggaagcagattgctcctgcargayccaggaaacggcccaaaaactgtgagt
gcccaaagtgtgagaagggraaaatctgcccccgaacacacatcctyactggggaacctgaagatccaga
tcacaggagaaggatttgaccttacctggagctgagacaatttagagggccgagcaaaatacaggggtag
aggaagcagtgggaaaagccctgtgggctctccgggtccccagggaagccatttctgactttgtctcaca
ggggtccctggggagggctgccagwggaactggggaaaggccacagggagaaggaaacctccagctgaac
tttgtaacaattccgaccgaacgcgaagtttcctggccagaactcaggggagggcgtgaatccggwgtgc
agactcagcacagaagccgtggcaggcaggaggcgcgaagcctgaaagccctgcttgctttctcagcwgg
gaggctggtagcctggggcaagttctcagccctgctcaccaactgcctggaaataaactcggtgctgttg
tgggggggcacggtgggagtgagaccggccttttkggttgcatgggagctgggtgaggcctgtnactgcc
agctttcccccacttccctggcgacctgcatgacacagcagaggcagccataatccccctgggaacgtaa
ctccattggcctgggaactacacccccatccctcacagtagccgcagcaagccccgcccaaggagactct
gagctcagacatgcctaaccctgcccccacctgatggtctttctctacccaccctggtagccgaagacaa
aagacataawctcttgggagctctayggccccacccatcgcctgagaaacwgaaatayttaycywggcma
mcttagggcaagcttrtatccwccctatactrtcgcagctgatgccctcttgaaagcgccacctcttggc
tggaggccaaccaactcaagacattacagcaaytcayracagaataaccctgcccctarrraaggagaaa
acgacagctatcaccactgcctgcaacatcctggctaaccagaggtcctgagtctgtccacgtgayaast
tcactrctakyataaccagcattcgagaaarccagcacactaagtctatctacaaccaaggaatctcaca
gagtctayttcactcccctgccacctccatcagagctggtgctggtattcaccgctgrgagacttgaaga
caggtcacatcacwggatycyttgcagacattccccagyaccagcccggagtctggtagctccactgggt
ggctagayccagaagagcaataacgatcactgyagtccggctctcaggaagtcccattcctaggrgaagg
gggagagcaccacatcaagggaacaccctgtgggacaaaagaatctgaacggcagsccttgagtcccaga
tcttycctctgacatagcctacccaaatgagaaggaaccagaaaaayaattctggtaatatgacaaaaca
aggttctttaacacccccaaaaratcacactagctcaccagcaatggatccaaaccaagaagaaatcyct
gaattgccagaaaaagaattcagaaggtcgattattaagctactcaaggaggcaccgaggaaggtgaana
ccaacttaaagaaanttanaatataatacaggatatgaatgraraaatctycagwgaaanagatagcata
aakaaaaaacaatcamaacttcwggaaatcgaagyacacttatagaaatgcgaaatgcwctggaaagtct
carcaatagaatngaacaagcagaagaaagaacttcagagctcgaagacaaggytttcaaattaacccaa
tccgacaaagacaaagaaaaaagaataagaaaatatgaacaaagcctccaagaagtctgggattatgtta
aacgaccaaacctaagaataatcggcgttcctgagnaagaagagaaatctaaaagtttggaaaacttatt
cgnggaaataatcgaggaaaacttccccgrcsttgctaragayctagayatccaamtacaaagaagctcw
awraaca
>L1PBB_5   Primate L1PBB_5 LINE1 repetitive element - a consensus.
kggtgggaagtttctttcagcagaggcacagktgcagtgctgggctcagtggggaaagtctgcgcctcta
ccccaacagtcaggcagccctggtgmttgtgaagggtcttggagaagggattccttctccccctcaccca
ccactgcagacacagctggggcttctcccacaggaackcagcatgggtgcacctatagacagcctttctg
gaacaattcagggtgantgcatccccacaggaggagcgccctccaggttcaggcttgcacgagaggcaga
gtcacaattcctctctacttggaacatcaacattcctgcagatgaaaagaggtgcctgtctgatctgaat
agctggaacactgggacaggagtgwggctgkgaggtggatmgctttcctgctggcctggcaggggagctg
aggtggctcccacccttcmccctgaaaaaacctcagcgcatctmactgagagctcccccagccaccyccg
tcaaggctgggacctctgcccaccattgggtattaaatctacccacctgctttagccacarctggtkyyt
acccakggayacctcccttactggcctgaagcctgaaccgtcaacccagtaaataaaatactggggaaaa
attaaataaataaataaataaagtgcacaccactggggaacgagataagcttcaagagacctctgccatt
ccaaccccacaggagacagtgaacycgctcacacaccaagcacattactactacaaccagcatctgagaa
agccakcacacaaagactctctataaccaaggaactcatacagagtcttcacccctgaaagcacccagaa
ccaaattaggctacaataaactatawwcattaaagtcacatcctcaaggggaaaaaaaattaaaaagcac
agtccaatcaaaaataaattcaaaaataattwgaa
>L1M3A_5   L1M3A_5 LINE1 repetitive element - a consensus.
gagtgawgtcagcaagatggcagaatwggaggtctcaggctccagtctccctcacagaaagtccgactag
caactattcacagacaagaacgcctttgtgaaaaatgccagaacttggaaatgagrctgagacanctncg
tggancacagaaacgaataaaaaccacattaaaagggtaagaggaaccgtctcactttaaccacgttgcc
cctmagtcggcacagtrccacacngagagaawttccccgggcctacagtttctacagtgggaaaagagag
ctkgaggtggacatccagcttccctagcattccaagatgcttcccaggargcccactcynatctcacctc
atgaggaaacactgagggaaatggcanggctagaccgtctggagtcaggtagaaacaaaaaaagggggca
nagctcatagtaaccagtgcacggatcttggtggtagctctgtattcctgccagcggtggcgcctgatca
gaggtaccagccaatggcatagcccacccgcaaagctgagctggtcgctcccagaagcacggtgagaagt
tcnacccggcttgagtccctagatggccagcctccaaacccagccttagascctaccccagngctccacc
caggcagggagatacacaccacmatgtatttcagcagagcacagaggctagacctgcctgacccaggagc
ccaaacagtgactcggcccagcctcaaagcccaccccaaggacccacacaggcaggaaggcaaacgcgga
ttgtgcakctctaccagggcaaagtgccagccaccgtccattcstwncagcaattccatctaaccttgca
gcctaggggctggccctgcccaactgcagagctsaaacagcggctccgcctggccasagagtmtaccccg
tggcycagcccaatagacgcgactncaacgtccantcagcggctccgcctaannncagagcccagccagc
agccccgcctgacctcagagcmcaggcantagcccgnccagctagagaacccaamagcaagcactgccta
cccatggttattaccagctgtcccatccagaatcacaagctggactgaataatgaaggtctwttcctgnc
gaagaacacctgtaaaagccagaagaggtggctgcctmgtcaaatgcatggataccaatgcaaggacgca
agggttacgaagaatcaaagaatcatgacacctccaaaataaactaacaaagctccaacaatggamccta
aagaaataaagatctataaaatgactggcaaagaattcagaataatcctcttaaagaagttcggtgagct
acaagaatacatagatagaaaattaaataaaatttggaaaacaatacatgaamaaaacgaaaagtttgac
aaagaaatagaaacgawtattctaaaacccaaatagaaatcctagagatgaagaacacaattgctgaaca
aaaaaattcaataaaaagcttcgacagcagactcaatcaagcagaagaaagaatcagtgagctcgaagac
agaacatttgaaattatccagtmagaggatcaaaaataaaaaaaatgaaaaacagtgaagaaagcctata
ggaattatgggacaccatcaagaaaactaacatacgcataatagaaatnccagaaggagaagagaaagaa
ggccagaaagyatattttaagaaataatgactgaaaacttcccaaatctggggaaagatgccagcatcca
ggtacaagaagcaca
>L1M3B_5   Primate L1M3B_5 LINE1 repetitive element - a consensus.
ggagtgagaacagcaagatggcagaataggaggtcccccactcatattccctcacagcaacaataatttg
gcagtcatccacgaacaaaagtgcctttgtgggagctttgggatccaggtaggaggttgcgaaacccwgg
tggagcccaagaccaaggaggacnatttgagaaggcaggcctgtgaccagatggcaggcttgctgatcat
ggtcttggctacagacccagaaacaktgctgtmcccctgtggactcagctacagcccyaattggccttgg
tcctgccaccmrmamcatmctccaaganacccaggaggagccatacccacccatgcctcgggtaacaggc
ccgccaanctcggtcctggctgtggaycctgaagcggcccatgacccagctccatcccctctcagmtgtg
gtcaggagccagtcctgcncgcccagggacccgcccagtgacctggnaagagcattcccagggantcagc
aggagccacacccacacatatacctggtawcaggtctaccacgtgcagaaccaactgcagatcctgaagc
agccctgtaactcagttccagctctacccaaccaaggttctgaatgtagtcctgcctatccaaagattcg
gcaagaggcatacccatccgtgctactggaggcaggcttgccaacctcagtctsactgtggatcntgaag
yagcagccatgtgacccggctccaaccccaytyaactgcgatcccagtggmaatctcatcagcccaggga
tctracaggagaaggtcttcctcccaaaaccagtctgtaawgactgaaagaggtgtttgytccttcaaat
gcacggacatcaacataaggctacacagatwataaagaatcaggcaaacatrmcaccaccaaaggaaact
aawaaagttccagtaaccaaccccaaagaaacggagatctawaaattacctgacaaagaattcaaaataa
tcatcttaaagaakctcaatgagatgcaagagaacacagatakacaactaaanaaaatcaggaaaacaat
kcatgaacaaaatgagaagtttaacaaagaaatagaaaccataaaaaagaaccaaatagaaatcctggar
ctgaagaatacaatgaaagaaataaaaaattctatagaaagctttaacaggagac
>L1M3C_5   Primate L1M3C_5 LINE1 repetitive element - a consensus.
gagtgatgtcagcaagatggcagaataggaggtctcagccctatccccccacagaaacaccgattttgac
gaatacmcacggatgagagtacctttgwgggagtccgggagtccagtggacaagttccagcacaccgttg
gagwaaaaaatctaagaatagatgcattgaagagggtaagaagaacagtttcactttacccacgtcaccc
ctcccccaaggtggcatagctcagtgccaagagagwctcctttggtccgcgatttctcccgcaggggaaa
gtgagagcatagtgagtgagcgtccggctcccccagccatgcgggacgctgcccaggaggcccacttttt
tctcaccccacccagaacactgaggkgatcggcatggctgagtggttgggagaggctgaaagcagggaag
agangmtggggactcacagcagccagggcatggaactcaacmaaaggccacagatcctactaactgcttc
gcggactccatcaggaagcccgcccacaagcttcwtgggatacgttgcctgcagacccccccagctggcc
cacgggcgcccccaacgctctgtatgcctcacccctggcttcggcatggctcccaagtgcactcctgtgg
acagcgagtgcaagcctctgcagatggcttacgagcacgcgcagacagccggcttgactctgcwgwattg
gaagaagstacacaaacttgagcatttcagggcaccgccctaggaaaaagaaacggaagcctctttgcac
tcggcctggctttgcaggattgagagaaganatacaatcttatctgcacctagcmtggctttgtgggatt
gagagaaggcatacaatcctaagacttacctcctcctcargagggaacaagaggwgtggagtgggyacat
cmatagaaaaggtctgagagagycccagaatccctagccaggctggttggtgaaggtctttctcttctga
agccagtcagtaaagactggaggaggtgactgtttcttcaaatgtgaagacagcaatgcaagactttaag
aaacatgaaaaatcaaggaaacatgacantaccaaaggaacataataattttccagtaaccgaccctaaa
gaaatggagatctacaaattgcctggcaaataattcaaaataatcgttttaaggaagctcagtgagctac
aagaaaacacagatagacaactcaacaaaatcaggaaaacaatacatgaacaaaatgagaagttcgacaa
agatatagaaatcgtaaaaaagaaccaaacagaaattctggagctgaagaatacaatgactgaacaaaaa
aatgcaatagagagcwtcaacagcagactcgatcaagcagaagaaagaatcagcgagctcaaagacaggt
catttgaaattatccagtcagaggatcaaaaaaaaaaaaaatgaaaaagagtgaagaaagcctgtgggat
ttatgggacaccatcaagagaaccaatatacgcatcatggaaatcccagaaggagaagagagagagaaag
gggcagaaagcttatttaaagaaataataactgaaaacttcccaaatctggggagagatatggacatcca
ggtacaagaagcaca
>L1M3D_5   L1M3D_5 LINE1 repetitive element - a consensus.
gagtgacatcagcaagatggcataataggaagccctggacctttcttcccttcacagacacactgattca
gcaacaattcacggaaaattacctttgtgagaaatgcagaaactagttgagaggctcctgcaccctgggc
gagcgcgaaaccagacccacatcaaagccggtagggagattcaggacaccctctcatcgaagtccctccc
cccggcwcagcgcmgtgcgatcggaaggaaaaaacccccaactcccggcttctcccaggggaggaaaaga
gttggttcgcacgtcaagtgccccracttttccgaggggctacccagaggactgtcttctgtcttgccwg
tctcrgagctctgataggcccggcataatctagacacccgggggagaacagagatggtggtttgggctgg
tagatgccatagctnctcacccctgctcagcacagaacaagnagatgaaaacccccagntctcagctttc
ccctgaggaggaaaanagttgaatggactggaaaacagaattgaatggagcatccaacaatccagctttc
tgggagtgcctaaggaaccgattgcatttcaacttgtcgcgctacgctgatangattnancataccctan
atgctcggcgactgcaaagaacaaaaancaggttggactagtacgaaggtttgagaggnccccaaaatct
ctggctaggctgatcggtgaaggtcttctcctgcataaggccagtctgtgaagactgagagaggtggctg
ctttgtataatgcgcagacaccaatacagagagtcaaggaaaataaagaatcagggaaanatgttccaaa
caaaggaacaggataattttccagaaactgaccctaataaattggagttatanaatttacctgacgaaga
attcaaaacaattgttntaaagatgctcatgaataacatgataaagatgctcaccaagatcaggaaaaca
atacatgaacaaagtgagaatttcaacaaagagatagaaaatgttaaaaagtaccaaacaaaaatcatgg
agctgaagaatacaataactgaactgaaaaattcactagagaggttcaacagcagactagatcaagcaga
agaaaggatcagtgaactcaangacaggtcattcgaaattatcgagtcagaggagcaaaaagaaaaaaga
atgaaaaagagtgaagaaagcctaagggatttatgggacaccatcaagngaaccaanatacacatcatgg
aagtcccggaaggagaagagagaganaaaggnccagaaagcntattcgaagaaatagtgactgaaaactt
cccaaatctggggaaagaaatggacatccagatncaagaagccca
>L1MB6_5   L1MB6_5 LINE1 repetitive element - a consensus.
ggtaatgtcagcgaaaatggcggagtaaggamctccgaaaattcactcctccataaaagcaatgaaaaca
ctggcaaaaattgtcagaatcaactttttcagaactctggaaattaaccaaaggcttacagcaatctagg
aagtgtttattcaagaaaaayagctgaatctcwgtaagaacagcgagctttgtggtattttaacttgccc
tantcccatcccccwctctccagctcagcagtagccttgaaaataacagcttatattatggtgaaaacca
gcagccaccggagkgggcagaacgggtttggagcttctcaaaagycncattcccagggaattgtcattat
ttgacctgtctggcggctccctggaagactccattcamagggcttgtctttatttgacctgactcagagc
tcactcagtgcgaamagcattatacctgggggcatttgttgaaaacawttagaggcaawtgtttaacacc
acagctgcctgaggcagtgrataacagttggggcaaacaagaggctgaccaaaaagcttaaaaggaaaag
ctggggaatgagatgtccgnaggggctttgaaaagctccaacatattcctgggaatctagaaggccacgc
gcatgcccagggctgtacacatgctcagaaaagacctaagaaggccctaagctctcacctctggctgacc
ttgagactctgcacaagcaggaagtgaagactaaggcagagttgtaaactgcctggctgagtgttgaagg
tatgccccaacacacacacagaaccccttggcaaagamtgggagacttgttggttcmaggcatttaagga
aatctctgtccaatcattagctgaccactaagctaacngagcagagacttcagtggccacacatgacaaa
gaatacagactttacaaaattagttcagaaaagtcactaaacaaacagcaacaanaacacaaaagagyaa
caacaaaccctggaaaggagggagaatctgatttccagagttgccacattatattatttaaaatgtccag
ttttcaacaaaaaattacgaggcatacaaagaaacaagaaagtatggcccatacacaggaaaaaaagcag
ttaatagaaactatccctgaggaagcccagacgttggacttactagacaaagactttaaatcagctattw
taaatatgttcaaagaactaaaggaaaccatgtntaaagaantaaagaaaaatatragaacgatgtctca
ccaaatagagaatatcaataaagagacaaaaattataaaaaataaancaaatagaaattctggagttgaa
aagtacaataactgaaataaaaagttcactagaggggtacaacagcagatttgagcwggcagaagaaaga
atcagcgaacttaaagataggtcaatcgagattattcagtctgaggaacaaagaaaaaagaatgaagaaa
aatgaasagagcctcagagacctgtgggacaccatcaagcgtaccaatatatgcataatgggaatcccag
aaggagaagagagaaarkggcagaaagaatatttaaagraatagtggccgaaaatttcccaaatttgatg
aaaaacatywayctwcayatccaagaagctcaataamctccaagtaggataaactcaaagagatccacat
ttasatgcatcatagtcaaactgctgaaaaa
>L1MCA_5   Primate L1MCA_5 LINE1 repetitive element - a consensus.
ttaakatagngaatnttcttcaaaatnnatanntanaaaacgataacaggacttctagtttccggtcccg
catgtaaggagcttgaaagttgccactccatcctaacaacaagtaaaaagctgaacaaactgaaaaatca
acaactcttcttagatccgtaagagaagtgaggtcatagggcaaaccactgcccccagaattggagagac
aaacaggtgaatacagagaatcacaacttaccggagcagaaactcataagcagaaacctctgtgggaacc
agtaccggggtaggaaaacctgaactgtaattgacaaattgctggaggctcagtgtggacaagtctgaga
gttgaaaactccaggggancccagtcattaggtgacccccacacttttgtgagttttacctccaggagcy
tgaccaggttctcacagtgaatatcggagaaaaatccccttgtgcttccggcaagaggagaggaaaagga
acaattctgaaatataccasagcattctgttcttttaacaaagtcctgccctcaggagaaactatttaac
cagagcctaacctgttagagttttwtcagagcctaaccgacctgggggaagggaaatacccaactccagc
cccctctagccatcctgtcccacctaaagggagaaaaaaagctaagaaacacttgtgaagttcacagycc
aggngcacaggctcactaaaagactgagaactaatcataggactatagaacacttccctcccccncatac
cttaccaccacattactaaaagcctatttacaacagttccttttacccagtacatcatgtccggctttca
acaaaaaattacaaggcatactaaaaggcaaaaaaaaaaaacacagtttgaagagacagagcaagcatca
gaaccagactcagatatgacagggatgttggaattatcagactgggaatttaaaataactatgattaata
cgctaagggctctaatggaaaaagtggacaacatgcaagaacagatgagtaatgtaagcagagagatgga
aactctaagagaagaatcaaaagaaaacgctagaaatcaaaacat
>L1MCB_5   Primate L1MCB_5 LINE1 repetitive element - a consensus.
tgacatgtaangagcttggaagttggcactcccttcaacaacaacaaaaagntgaacaaacagaaaaatc
aatgacttttcttagatccataagagaagtgaggtcacagggcaaactgtcancctgaaatctggagaga
caggcgcatgcagagaatcacagcagagctctgctttcctgaagcagaagcctctgggagcacaagctgg
taggaaaacttaaatggtaattttggcaaattgctagaggctgagtgtggactagtttgagagtaagaaa
ttctcggnggcccagtctaggggaacctccacactttcgtgggctttacctccaggagtcccactagttt
ctcacagtgaagatccgagaaanttcgcttcacggctctggcagggggaggggaaaagcaatcattktga
aatacgcccagagtattctccgtaacaaactcttgccctacaggagaaaatactttgccagagccttatc
ctagctttagggaagggtaatcacccaactccagccccctctagccttcctgtctcacctaaagggagaa
aaaaagctaagaaacacttgtgaaggtcacagcccagggactcaggcccactaaaagactgagatttaat
cataggattatagaacgtttcccttccccmataccttaccaccacatcaacagggctccagtataataac
aatggattacagctgaaagaactgcaaaacmcagactctatttaagaaggagctnctagggaaacccaaa
gacaggagaggagacaaaaacaaggacaccggagtraagtttagcctctgacacctacagctacagcaaa
cagtaaacacagtctaactcttagccagataaacataaaacctcacattaaaggcctatttacttcagtt
ccttttacccagtacatcatgtccggctttcaacaaaaaattacaaggcatactaaaaggcaaaaaaaaa
aaacacagtttgaagagacagagcaagcatcagaaccagactcagatatgacagggatgttggaattatc
agactgggaatttaaaataactatgattaatacgctaagggctctaatggaaaaagtggacaacatgcaa
gaacagatgagtaatgtaagcagagagatggaaactctaagagaagaatcaaaagaaaacgctagaaatc
aaaacat
>L1MEA_5   Primate L1MEA_5 LINE1 repetitive element - a consensus.
cagacttccgattccggtaatggtggagtaagcccctaccggaccaaccctcccgcagaaaacaactata
aaacctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaacaaaagcaggcagaaactg
gaggggagtcgacacttggaagaagggagcwgcacggagtgagttcccatttctgtggcttttagcctga
gagcaggccgcagttggtgcggcgtacagatggctaaaacwtcagtagaaaacccgcggtctttctggcc
tggagaaccagagaantgaatctagggcaaccacagccactggaaagagtggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactcaaagcagcccagctaaagacaaaagatctgaactgagactggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagataactgcctactaaaacaaaagaaacaacac
tcattagagaaaaataacagaatccagaatctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmacataagaagaaacagraaaaatggaatncatccttaagagaaaagaaaatcaaatccg
accctgagatraaccagatgttggaattaacagacaaggattttaaagcarctattataactatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtaagtgaacttaaagatagatcaatagaagttatacaa
tgtgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgttcgacaatatca
aatggtcnaacatanatgtaattggaatcmcagaaggag
>L1MEC_5   L1MEC_5 LINE1 repetitive element - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>L1ME_ORF2   Primate L1ME LINE1 repetitive element - a consensus.
atggcagacntaaancctaacatatcaatrmttacattaaatgtaaatggattaaacactccaatcaaaa
gatacagattgtcagagtggataaaaaaacaacacccaacaatatacwgcctatmagagacacaccttaa
atataaagacacasataggttgaaartaaaagaatggaaaaagatataccatgcaaatwgtaaccaagag
aaagccggagtggctatattaatatcagacaaagtagactttaaaccaagaaatattactagagataaag
agggacatttcataatgataaaagggtcaatctatcagaaagacataacaatcctaaatatatatgcacc
caanatcagagcaccaaaatacataaagcaaatactaatagaactgaaaagagaaatagacaaatccaca
ataatagttggagacttcaataccccactgtcagtaattgatagatcaactagacagaaaatcaataagg
atatagaagacttgaacaacactatcaaccaactggacctaattgacatattatagaacactccacccaa
caacagcagaatacacattcttytcaagtgcacatggaacattcaccaagatagaccatatgctrggcca
taaaacaagtctcaataaatttaaaaaaattgaaatyatacaaagtatgttctctgaccacaatggaata
aaawtagaaatcaataacaaaaagatactctggaaaatncacaaatacttggaaattaaacaacatactt
ctaaataactcatgggtcaaagaagaaatcaaaagagaaattaaaaaatattttgaaataaatgaaaatg
aaaayacaacatatcaaaaatttatgggatgcagctaaagcagtgcttagagggaaatttatagcattaa
atgcctatattaaaaaagaagaaagatctcaaatcaataacctaagtttccaccttaagaaactagaaaa
agaagagcaaattaaacccaaagtaagcagaagaaaggaaataataaagattagagcagaaataaatgaa
atagaaaacagaaaaacaatagaaaaaatcaataaaaccaaaagttggttctttgaaaagataaaattga
caaacctttagctagactaaaaaaaagagagaagacacaaattactaatanatcagaaatgaaagaggag
ayattactacagatyctacagaaataaaaaggataataagagaatactatgaacaactttatgccaataa
atttgataacctagatgaaatggacaaattccttgaaacacacaaactaccaaaactgactcaagaagaa
atagaaaatctgaatagacctataactattaaagaaattgaatcagtaattaaaaaccttccaacaaaga
aaagtccaggaccagatggcttcactggtgaattctaccaaacatttaaagaattaataccaatcctact
caaactcttccaaaaaatagaagaggagggaatacttcctaactcattctatgaggccagcattaccctg
ataccaaaaccagacaaagacattacaagaaaagaaaactacagaccaatatccctgatgaacatagatg
caaaaatcctcaacaaaatactagcaaancaaatccaacagcacatgaaaaggattatacaccatgacca
agtgggatttatcccagggatgcaaggctggtttaacatayaaaaatcaaycaatgtgatwcactacaty
aacagrntaaaggagaaaaatcatatgatcatctcaatagatgcagaaaaagcatttgacaaaattcaac
atccattcatgataaaaactctcaataaactaggaatagaaaggaacttcctcaanataataaaggnmat
atatgacaaacctacagctaacatcatacttaatggtgaaaaactgaaagcwtttcccctaagatcagga
anaagacaaggatgtctactctcaccatttctattcaacattgtactggaagtcctagccagtgcaataa
ggcaagagaaagaaataaaaggcatacagattggaaaggaagaagtaaaactgtctttattkgcagatga
catgattttntatatagaaaatyctaaagaatccacaaaaaaacwactagaactaataaataaatttagc
aagntcncaggatacaaggtcaatatacaaaaatcaattgtatttctatatactagcaacgaacaatntg
aaaatgaaattaagaaaacaatwccatttacaatagcatcaaaaaaataaaatacttaggaataaattta
acaaaatayatrcaagacttgtacgctgaaaactacaaaacattgatgaaagaaattwaagaagacctaa
ataaatggagagatataccatgttcatggattggaagactcaatattgttaagatgkcaatactccccaa
attgatctatagattcaatacaatcccaatcaaaatcccaatggttttttttgtagaaattgacaarctg
attctaaaatttatatggaaatgcaaaggatccagaatagccaaaacaattttgagaaagaagaacaaag
ttggaggactcacattacctgatttcaaaacttactayaaagctacagtaatcaagacagtgtggtattg
gtataaggatagacatatagatcaatggaacagaatagagaacccagaaatagacccacacatatatggt
caaytaatttttgacaaaggtgccaaggcaattcaatggggaaagaatagtcttttcaacaaatggtgct
ggaacaactggatatccatatgcaaaaaaatgaasttmgacccctacctcacaccatatacaaaaattaa
ctcaaaatggatyatagacctaaatgtaaaanctaaaactataaaactyttagaagaaaacataggagaa
aatcttcgtgaccttgggytaggcaawgatttcttagatatgacacmaaaagcacaagcaacaaaaggaa
aaattgataaattggacttcatcaaaattaaaaacttctgctcttcaaaagacacyatcaagaaaatgaa
aagacaagccacagactgggagaaaatatttgcaaawcatatatctgacaaaggacttgtatccagaata
tataaagaactcttacaactcaataataaaaagacaaataacccaattaaaaaatgggcaaaggayttga
acagacatttcwccagagaagatatacaaatggccaataagcacatgaaaagatgctcaacatca
>MER89   Long terminal repeat from endogenous retrovirus.
tgagagactgaatatacaaacggacaatggccagaccatatatgaaaatagaactctgacccacaacctc
tgcagcaacctgcccaggaaaccaatccccttatctacaattacaacaaasaaggcagcctgctgtaagt
cagacttgcasaaagtcagattgctctctctagtaancagyccaggaagccaaacaacaacctctgcaac
aattggcccmaaatggccaggacttgatcaataactgmcagcttccctaatttttgtccctgcttccaac
ttaggaccaaccagagaaagcyaaatatgcwccccwaaccaatcacataggatgccctgcttctagttag
cccgcctmcagcttccccatgccaacaacctccaatcagggcatacctgaagtcttcccttttttccact
ataaagctttcccactcctctgcctgcctttgagtctctgccaaacgcaagtgatggtggctgactccct
tgctatagcaagctctgaataaatagcctttgcttgttctcatttggktggtcttcatttatttccaca
>MER90   Long terminal repeat from endogenous retrovirus.
tgagaaagagaaaagcagcccctgacatctgagagctggcctggtaccnwcagctaggccttggtgttgc
tgggagctggcctggcactcacagctaggccttggtgttctcctgttgaacataaacaatttcacagaat
atcaacatcagacaaggccactctgtgaccatgatggatcgagacaaaaacaagaccactccgtaatcat
gtctgaacacagacaaaaacatgaacattgtccaagccacaaaaatgaccaagcatccccctctcccggc
taatatgagtgactgctgcttctttaccaattacagctttagcctcgctctagtcttccctccttctaga
taagatttattaagatacccaatcacagaattactcccgcttcctgacagcatccaatccagagcaaagc
ttcgcttccttaaaccctcccccaaatcacctaacacaagcccaaatcctataataagtcctttctaaca
tcctcttactgagacgccccgtggttccccatggtgtgcgttctccctcgctgcarcgagcaataaaccc
aacttgttcaaccacaggtgtgttcctggtggtctttggctggagggcactgaca
>CHARLIE3   Primate CHARLIE3 repetitive element - a consensus.
caggggtccccaacccccgggccacggaccggtaccggtccgtggcctgttaggaaccgggctgcacagc
aggaggtgagcggcgggcgagtgagcgaagcttcatctgtakttacagccgctccccatcactcgcatta
ccgcctgagctccacctcctgtcagatcagcggtggcactagattctcataggagcgcgaaccctattgt
gaactgcgcatgcgagggatctaggttgcgcgctccttatgagaatctaatgcctgatgatctgaggtgg
agctgaggcggtgatgctagcgctggggagcggctgcaaatacagattaacattagcagagaggtttgac
tgcacagagaccataataaatcaattgcttgcagactcatatcaaaaccctatcagtgagtggcaagtga
caattaagctgcatctggtggcaggctttatagtggcaagtgagttgatgtacttcaattgtacagctgc
atctggtggcaggctttaagtcagaatccgacacttattttagtccgcgcgtggcctgctcattatttta
tttaccacttccatccgcgcctctttcccgcactgcgcacttgtctcagtcacagttttggtaagcccac
aagctaaccctagccaaaatgagtaaaaaacaaacgtcactggagagcttctttgaaaagggggaaagac
ccaatgatgagacagcagaagactctaagactgccaamaaaaanaangctgcatttaaaagaaaatacca
agagtcctacttaaattacgggttcattgcaacaggtgattcacattctccaagcccgctttgtataata
tgtggtgaccagctatccaacgaagccatgaaaccttcaaaactgcttcgccacatggagaccaagcacc
ctgcattagaagacaagcctttggagtttttcaaaagaaaaaantgtgaacacgaagaacagaagcaatt
attgaaggccaccacttcatcaaatgtgtctgcactgagagcatcattcttagtggctaaccacattgct
aaagctaagaagccctttactgttggtgaagagkktgatcctgcctgctgccaagssacatttgtcatga
actctwaggagasgmtgcmsttcaaawggtggcatgtgttcmtctttcakctttcagccaccacaacmag
acgaactggtgaaacagcagaggatattgaggcacagttgttagagaggatkaatgagtcaccgtggtat
gcaatccaggttgamaagtctaccagtgttaacaacaakgmaacaakgcttgcttttgtgkgatatattt
ttcaggaggatgcgcawgaggatatgttatgtgcacttttgttgccaaccaacaccacagctgcagaatt
attcaagtctttgaatgattacatatcaggaaaactgaattggtcattttgtgtcggtatatgcacagac
agagtggctgccatgactggatggctttctggtttcactactcgggtcaaagaggtcgcttctaaatgtg
agtctacacactgcgtcatccatagagaaatgctggctagctggaaaatgtcacctgaacttagcmacgt
tttgcaggatgtsmttaaaattatcaaccacattwaagtacatgcccttaactcacatctgttcgcgcag
ctctgtgaggagatggacgcagngcacacacgtcttctcttatacacagaagtgagatggctttctaaag
gtagatcactggccagagtttttgagttacgagagccgctccagagatttcttttagaaaaacagtcacc
actggcagcacatttcagtgacatagaatgggtcgcaaaacttgcttacttgtgtgacatattcaacctg
ctcaacgaactcaatctgtcacttcaggggagaatgacaactgtgttcaagtcggcagataaagtggctg
cattcaaagccaaactggaattatgggggcgacgagtgaacattgggatttctgacatgtttcaaacatt
agcagagattttgaaagagactgagccagggccttctttctcccagctggtgcatgatcacctatctcag
ctttcaaaagagtttgagcattacttcccaaccacaaaggaccccagaactgggaaggaatggatccgcg
acccatttgtgaataagccagstgaatcgactttgtccgtgctagaagaggatcaactgcttgagactgc
aaatgacggtggccttaaaagtatgtttgagacaacttcaaatctccatacattctggattaaagtcaaa
gcggaatatcctgagattgccacgaaagcactgaaaagcctgcttccatttccagcatcctatctttgtg
aagcagggttttctgcagtgacagcaaccaaaacgagattacggagtagactggacataagcaacacact
tcgggtgtcgctgtctcccatcacccccagatgggaccgtctagttgcaggaaaacaagctcagggctcc
cactgattctacattatggtgagttgtrtaattatttcattatatattacaatgtaataataatagaaat
aaagtgcacaataaatgtaatgcacttgaatcatcccgaaaccatcccccccccctggtccgtggaaaaa
ttgtcttccacgaaaccggtccctggtgccaaaaaggttggggaccactg
>MER91A   Primate MER91A repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaagggcgcctggccgagggagcgagtgggg
gctgaaatccagcccgtgctccgctcgccaagccgtgmgtcctggtgtggggctgcgtctacctagagga
aggggcgcctttttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>MER91B   MER91B repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
catcacagatttgtataatgacaattttccaacagatggcagtaaagtgtcttgaggaaggggcgccttt
ttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>MER91C   Primate MER91C repetitive element - a consensus.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
tctatgatgtgaatggcgccccctagagttgtgcagtgcacaacctgcacaactgtacatggcagccctg

>HARLEQUIN   MER57I, MER41I - a consensus.
[encoded data, 6958 characters]
ctcccactaatgagtgagattctcaaagggggggaa
>CHESHIRE   Autonomous DNA transposon; hAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtactgcccgtaaact
aagaatggtttttacatttttaaatggttggaagaaaaatcaaaagaagartattttgtgacatgtgaaa
attatatgaaattcaaatttcagtgtccataaataaagttttattggaacacagccacgcccattcgttt
atatattgtctatggctgcttttgcgctacaacggcagagttgagtagttgcgacagagaccgtatggca
ytctcattgcctttgcactsctgtttctraactataaccagtgttttgagtgccatgcatattactgtac
tgtaacattttwttytattattaatgnatacycatcatgtcaaaacaagaaaagaagagaaaagtrgact
ttgaatgttrcacttttaaggcacaatggagtatggattattttgttatggcaaagcattttattatgca
atgacactatagctgtgctaaatacaatatacattgacattaccagactaagcactcatcacartattcc
caaatcacaggaaagcaatngtcagaaaaattagaaaatttaaaacagaatatctcatcacagcagaatt
tcttcacaaaawtaaaaaatnaaaatgaggctgnaaccaaagtaagtttctgagtggctcatttgttagc
caaggaaggaagtcatttaccaatngtnaattaattaaatcatgttgattgcagcaggcatagaaatgtg
tctagagaaaataaacttaaaactattagccttttgataagaagagttgcttaaagagttgaggacatca
ataatcaattaaaaaggcaaatgrttttgagtggttttccttggctcttgatgagttgacaggtgttact
gatactgctcagttgtttatttgaggagtcaatgctgagtttgaagtgctgaatagccttaatgaatagt
ctgtgtggaataattgcagacaagaatatttcaaaaagttgagaaaacactaattyagtacaacctgaag
gaagtggaatctgctaagatgtgttaaaactgatggtggtaaaantatgtgtggagcagaaaaaagctta
gttggacaaataaagctgtgaaaatgtaagntgtttaaagyctatggttatttattttattcatcagcaa
gtactttgtagaaaatatttgaatctatcatgtgatattgaaccagtagtgtcaacatttgctcttgtgg
acttaaccattgtcagttctntaaatttttgtcagaaatagaagctgaatatcctgacttgccctgctat
acagyagtttgatggcttagnagtgctaaagctttattgntattttttgagctynggactgagattgaaa
tttttctgaatgagaagaactrctctcaaactrtttatcaaacactgagtggctttggaaattagctttt
gctgcagatttgataatatttcttaataaattcaacctaaaattacaaggcaaaacagcacttatattga
aacttatactgttgtaaagtcatttcaatgrcaacaactattgtttgaatcacaagtaatgtcaagctgc
tttatatacttcccatgctatcaaaagttaaaacaaagaagtaagatctccattcccacacaatttgtag
cagatatattttccaaactcaaactacagttccagcagcattttttggaccttgatgcaagtgcaaagga
aatwtccatttaactgtgcaattgagaagcttcctacctaaccttcaattggaatgattaatctgcaagt
aatgacatgcaaatatcaagagaaaattctataaatgccttccaagcaatgaatatgctcaattnaaatc
atatgctcgtgattgatatcantatttggcaatacctatcctgcgttgaaaataaaacattttcaaacat
gaaatrtgttgcattacagattagcatttnaacagatgaacatttgcaatcrattttgatgatagggaac
actaactttgaaccccaattaagcaaaatgttatcccwaaaaagaattccattcttctcattagtagacc
tgtattacaaaaaattgtactcaattattattwttattatattttgaatttcatcaataaaaattgtgga
attttttctcttgttatataagtacctacataatatccttgattttgcctcttggcccgcaaagcctaaa
atatttactatctggccctttacagaaaaagtttgccgacccctg
>GOLEM_A   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataataccgtatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattg
cctacagtattcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatag
cctaggtgtgtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaat
tgcctaatgacgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>GOLEM_B   Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagnctc
aggcaggtccttcaggagatattccagaagaargcatcgttatcataggagatgacagctccatgcatgt
tattgcccctgaagaccttccagtgggacaaaatgtggaggcggaagacagtgatattratgatcctgac
cctgtgtaggcctaggctaatgtgtgtgtttgtgtcttagtttttaacaaaaatnttttaaaaaataaaa
aaatwaaaaatttwwaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtaca
gctgtacaatgtgtttgtgttttaagctaagtgttattacaaaagagtcaaaagttaaaaatgcaaaagt
ttataaagtaaaaaagttacagtaagctatggttaatttattgctgaaaaarwwwwwwwwwwwwwataaa
wttagtatagcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcac
attcactcaccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaag
tgcyctatacaggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagat
acacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttgt
agcctaggagcaataggctataccayatagcctaggtgtgtagtaggctataccatctaggtttgtgtaa
gtacactctatgatgttcgcacaacgaaattgcctaatgacgcatttctcagaacgtatccccgtcgtta
agcgacgcatgactg
>LTR34   MER4I-group; a consensus sequence.
tgtaaagaaaaataaaaaatctcaggacccccnnncyccntaaactccttatgcccggaggccgagtcat
tgcaacaccctcttccaaatgaatagctgttactagcatcatgcatcagccagatccccaaggaaaggta
aaaggcctcaggcatctgcaaaagactgcccccacagatcattcataagtaaattctttgctggcctccc
ataaacaaggacatgccaattgtaactttaggtctgcaacctaagtctagctcctaaaactaaagtctgt
tcgattccacactgataatgtcaattacaagcttatcttcccaggtgcagaacaaagacaaggtgagatc
agtcatttcctccacctacccagagacgtctgcataattgactcttcctttactccctttttctcttcaa
acattcaccttatcttatgtaaaatatagatttactgggcactaactaaagtctcacaggaatgtaarcc
atttgccttaccgcctacctgcccctcttcctacatgccttcccycactttaaggaaatgtataaatact
aaacctcctgaaaacctcttcagaaaaagcagccacagatgtgtctgtggctcgcgtttttcccggacat
gccctaaagctggcttaataaacctcgattgattgagacwtwtgcctcagtcactcattttggttgtca
>LTR35   MER4I-group; a consensus sequence.
tgagacagagtagggatggggcttggyttcagctcacccccactrgagcattctttcatgcattcccact
gatcacaaaacccacaccactacctcactganactatayccgctawymkksrkrywywrrwmatasmmak
wmwatawwswtyytttkkksmyyycwnanntttaaccatgccttttacttaaagaattccaggaactggc
cttaggagatcyaaacatcgaaccaaggttgcagagtgtcccacctcgggaaggaatgctgaacaattga
tttacagccttgttgccgctggccagaccaccaggtggcccattactcaagataaccatcgcaaccagat
aatgctgacctgcataccctaccytcacgtgctttgcccagcccagcctgcataccctacccctgatgtc
aattcccgcgctttgcctaataaaaaaatccctaccggctcttttcggggaatcagctcarggaattctc
kctctctcttctgctgtctcccttgtgcycragcataagctccaatraagccttgtctgggaaaactgct
tggycccgtgttaatttcyattacatggrgagcccaggaacctgtggtcnntaaca
>LTR36   Putative long terminal repeat of LTR-retrotransposon; MER4I-group.
tgtaaccaagtacccccatttttctaagaaaaagagaatgagttttattatttttttttctyttttctcc
tttttcccctgttccccacttcctacttagccctttagaaatgcaattataaccttttacctccccttca
ccagacactccctacagggcaagttcatctaactatgtgcttagaagctccagagcggaactctctccca
ccaggagattgcctcgagagataacagtcratttacaacccaaagtatgcccgctacgaaactctctccc
acctggagagttttggccacytttacaacctagttctgcccacgaaggcgccagcagtcaccagctcaac
cgcctggtagataaggcaccgaagcaagtcacgtagacccccacctgctgcttcctcccctgcatgccat
tcatgccaagcccccttttaaaagyscctgctttctgctccaaaagcgaagcggtacccttaaggcagga
agcctgtacttcttccccctaagctagctttggaataaaaagtcactttctttataccagacctcgctct
tgttaattggactctgcaagcggtgagcaactgaacctgcgtttcagttaca
>MLT2A2   Interspersed repeat MLT2A2 - a consensus.
tgtgatggttaatattgagtgtcaacttgattggattgaaggatgcaaagtattgttcctgggtgtgtct
gtgagggtgttgccaaaggagattaacatttgagtcagtggactgggagaggcagacccaccctcaatct
gggtgggcaccatctaatcagctgccagcacggctagaataaagcaggcagaagaatgtggaaggagcag
actkgctgagtcttctggccttcatctttctcccgtgctggatgcttcctgccctcgaacatcagactcc
aagttcttcagcttttggactcttggacttacaccagtggtttgccaggggctctcaggcctttggccac
agactgaaggctgcactgtyggcttccctacttttgaggttttgggactcagactggcttccttgctcct
cagcttgcagacggcctattgtgggacttcaccttgtgatcgtgtgagtcaatactccttaataaactcc
cyttcatatatacatctatcctattagttctgtccctctagagaaccctgactaataca
>HAL1   HAL1 repetitive element - a consensus sequence.
aagatggcagattgaacatatacatttatttttctccctcccaaaaccccactaaaatgacaataaagga
attttttaaaagacataaacccacaaggacaaagagaacaggagaggagacaatagcaacaaaattttgg
aagctggaaagcagatggataagtggtaactgacttagcagacctgagaaagctgaatcctaagccagca
gtggggaaagccaagaagcaacccaatttacaccgccagaatcctccccaaaaggctcaggaattggtgg
caccaggtacctctggaagtgggggtgaaggtgaggctaaaaacagggaggattgattgaaagtctgttt
aagaagcagttagatccccagattccctcccccactctatngcagccagataactgatcctcctccaccc
tagcagaagactggaggtttattctctggagaggataaaacaaaggggtctctggactggggaacaccag
gcacagttgagggcagaggggnactgtactgaaaacaggggaattaagtgaaagtttacatactgaatgt
tgagactcccagccctcttcccccattcagctcccagaatgctggcagccaggcctataccctccagaca
ggagattagaagagntcttctctggagaatctgaccagcccaagagaaaagacttaaaaatactgataat
agaggttccccaaacaaaatagcccagccagatcacccctatagtgaagcccacmacctggcaagcccca
cccacgcactcagagcttccaagtcgctttttagtstcccactcttaaatatgagcagacagccaaggat
caccagacatctgaggaaancctctaatatggcagacaganaaataaaaacagagaaaaacawwntntat
ccatgaaacaagaayaggatgctataaaaaggaacattcagagaacaaaaagaagctcttggaaattaaa
aacgtgagagcagaaattaaaatttcaatagaagggttggaagataaagttgaggaaatctcccagaaag
tagaacaaacaaaggataaagatacggaaaataggagagaaaagaattaaaaaaattgaggatcagtcca
ggaggtccaacatccaactaatagaagttccagaaagagagaacagagaaaaagatggaagagaaattat
caaagaaataattcaagaaaatttcccagaactgaaggacatgaatttccagattgaaaggncccaccga
gtgcttaccgcaaaaatgaaggaaaaaaatagacccacaccaaggcacatcattgtgaaatttcagaaca
ctgaganaaaaggaaaatcccaaaagcttccagagagaaaaaaaggtcacatacaaaggatnagaatcag
aatggcatyagacttctcaacagcaacactggaagctagaagacaatggagcaatgccttcaaaattctg
agggaaaatgatttycaacctagaattctatacccagccaaactatcaatcaagtgtgagggtagaataa
agacattttcagacatgcaagatctcaaaaaatttacctcccatgcaccctttctcaggaagctactgga
ggatgtgctccaccaaaacgagggagtaaaccaagaaagaggaagacatgggatccaggaaacaggggat
ccaacacaggagagaggtaaagggaattcccaggatgatggtgaagggaaattccaggatgacagctgtg
cagcaggcctagagagcaaccagtccagattggagcaggaagatggaaggctccaggaggaatgttctca
agaaaatagaanacaaatgaaactgatagattatctgatgtgtttgaatatattgagaggntatnattta
gwcatgtgaaagtttgggggagaattgaattagtgataggtacanagaaaactaagcaaatgaaaaaaag
caagacaattattaactccagggaaaacaaaaagttgtacaagaaaggaaatgtaatcatagtacactac
atggctcagctgtgaataacatatttacatagtcataataatgtaaacactraatactgatttaaccaaa
attatgatataaactatattgggaggataagaaatggaaagggtgtgcgtatkgtgtangnggaatgara
gaantaaatcctcatcttccatagtaggaagtcartagataatgtctaaaactgaaaaatcaagaaatag
caatataagcatgttatttagaaatatggaggtaaatattccaaaagaatcagctaaaagagttgaaagt
ggttgcctctggggaaggagctgnaggtggtgaagagngnagggacggggaaytgctgttttttataagc
cttttagtactatttgaccttttaaactatatacatrtattactttaatttaaaaaantaanttataaaa
aagnaaataagta
>MER66I   Primate MER66I repetitive element - a consensus.
[encoded data, 6745 characters]
ggagtatctaatctctgaggggggaa
>LTR37A   Primate LTR37A repetitive element - a consensus.
tgtagggaaaaattgtgcttcaatggaaaactatgcattgtctagagcacacccttccgggttatctgat
tctagctctgtcattgtctttgagctattttacaactctgtaarttgtagataactgatagcaatgcaaa
ataattcttgtctataganatgcaaataaattntgtccggtrgaggttcaattgacttccttcccccact
gtggaaaaagccagttttgcntcyatttgcaaattcatttcaatattcctgattncctataaatgtgtst
gttctttgaattctcctttgaaccggttrtaacatcttactggttccctcattaattaatgagttaaata
aaatctttaacacgtgttcattttatatytgtatgagagtcatgattttaccttttttgaaaattatcct
ttaaca
>LTR37B   Primate LTR37B repetitive element - a consensus.
tgttaaagaaaaattatccmaaacttggaaataaggcaaaaagatgacwgcatgtcctttcaatgtcata
ctggagcattgtctaataggctcactcaaggattatttaattatctaggggaatgtacctntgttgactt
tgctatttactatttgattagggcccagatactatgaagttacatgttaacttgtagatttctgtccagt
agaaaagataaccycaaaggttatagttttattgccctgtaggatattaaccagttttgtatctaactta
gcaatcttattccarcattcttctttactgaatgcctataaatacctagtttctcaaatgctctttgaac
cagttttaccatcttactggttccctcattaatgagttaaataaaatctttgacacgtgttcattctata
tttgtatgagagtcatgtttttaactttttgaaaattatactttgaca
>CHARLIE5   Primate CHARLIE5 repetitive element - a consensus.
ctgcgctgtccaatacggtagccactagccacatgtggctaytgagcacttgaaatgtggctagtgcgac
tgaggaactgaatttaatttntattattaatttaaatttaaatttaaaaactgaaacagtataaaatatt
ttnccattaaacayaactttattgttttggtaggactatayttcactttaaccattgcatcgcgkcatat
agatattgttgtattgtagtgcgcgtgtcgggtacgtgcgtcatttctagtattacacgtaaacacatca
ctaatctagtcggtgtcaayagattgattcagttcaaatgatttttttctrtgcactgatgtaacattgt
aatgtgtttatttgaatattttatgcagacagcacgarttacagtgatacctatgtaaatcanaattggt
aactaaattgaaatacttattattttmattattataaattattttcttagttaaaaataaatgtggamaa
atttaaatttaaaacgaaggcatactactgatgtagaattgagtggagatgcagaagttagtactatgac
tagaatagtaaagaaacaagagactggaagaaggtatgtcgcaaatttcatgatgaatggcaattgcaat
ttgctgcggcagagcaaaacaaaaaagctgtttgttgtgwaaaaaatgttaaagataacaaagtagacaa
tattgagagacattttcagcaaatacatagtgaatttgataagtttctcctccaamagtcaaaaaagaat
taacaaaattagtcgnctgaaatcagaattaaatgtccaacaaaaaatatttaataagttttaacagnat
ctaagcttgtaactttggccagctataaaatgtcttggattcttatwcaaaaaaagaaaacaattttaga
tggagagntggtaaaagaaattatttcagttatggaaattttgttagaaagttatgaggaaaagactaaa
aagatattttacaaaaagtgaaagatcttcaattaagccaccaaacaattgcccgtagaatgnaagacct
tkctaacaatatcaaagataaattgattcaaaatttgaaaaattgcaagkactttagctttagatgagtc
gtgtgatatgagacactgcccaattaatactttgggtatgttttactcaaaggacttscaaatttacaaa
gaaatctgttgtcaattcatgncttaaaaaactcgtagcaaagattttttaaactcttttacatctnnca
aagaakaatttcacttagatatgaaaaaaaatktttctatcacgncggatggtgctccagctatgttagg
tcaaaaatccagatttattggaattttaaaacaagagactgatgttttccttattgcttcattccactgw
atgatacatactgaaaatatttgtgctcagttttctgaagcagactccgtgaaaggwgtcatgggtacag
ttgttaaaattsttcagtatatacgtgcaaatgctgtgaatcaccgccagtttatggaactgttgaaaga
aatagaagacaatgaatttaatgatcttgtgttctttgccaatgttcattggttgagtcatagaagagtt
ttacaaagatttactgtactgttaactccaattcaagattttcttgaaacaaaaggaatgcttgccaaat
attcaataatcaaagacaaaaaatggcantgtgatttacgttttctcaccaatatcacactgcatatgaa
caagctaaatttgaagctccaaggaaaggaaaagcttatttgtgacctagctagacaggtataagaattt
atgttgaaattgaaacttttcataatacaaatcaataataatgattttacacatttttctaacgtgaatc
aatatgcagaagattttaattgtaattgacagtattatgtaaattggctgcaaaaactacaagaaaaatt
tgaagaatattttgttgatattgataaatttagaattgcttttcaatttatgcaatacccctttgaattc
aatgttaataatactgagttgacacaagaattagtgaatttacttaacttggacagacatagttttgaaa
ctgatatscttttgcttcaaagtaaaatcaattcttctaaaaaaatgaaccagttttgtcaatgtggatt
taaatattaaaagaaaatgatttttgatactcgattcagttattggaaaacttttaagtatgtttggaac
aacttgggtatgtgaatctactttttcaactgtaaattttatgaaatctaaatacagatcaagtatttcc
gatgaaaatttagcgtccgaattgagatgtgctgtaagtgtaaaatacacaccggatttcgaagacttag
tatgaaaaaaagaatgtaaaatatctcattaataatttttatattgattacatgttgaaatgataatatt
ttggatatattgggttaaataaaatatattattaaaattaatttcacctgtttctttttactttttttaa
tgtggctactagaaaatttaaaattacatatgtggctcgcattatatttctattggacagcgctg
>TIGGER5   Primate TIGGER5 repetitive element.
cagatggttcccaacttacgatttttcaactttacgatggtgcgaaagcgatacgcattcagtagaaacc
gtacttcgaatttctgatcttttcccaggctrgcgatatgcggtacaatactctgtcgcgatgctgggca
gcgrcagtgarccgcagytcccagtcagccgcgcgatcacgagggtaaacaaccrrtaytctacagtgta
ytrtrtgactggcgtttcttggacattgtgtttcgcgcttttgcatcctgtcatgtctacagtatgctca
tctatgcctcctgcttctggtgagaagaagaggaaggcaattactcttgagatgaaactcaagataatcg
ccctgcatgaagacggcaagggattaatggccattgcacaagagttgggactttcacgatccatgatcct
caaccatcttaaagaataagaagtgaatcagtgaggcagtgaaatcgtcagcattagttaaatccactgt
cacgaagaaaagagcttggctgattgataatatcgaaaaattacttgtcatgtggatgtaagaccagata
tcgaagggcatactacttactgatgatgccagctagggcaagaagtgtttttgattacactaaaagagtg
aatgaatgtgtcgatgatcctattatacacaagtgtttatggcaagtcataggtgattccagtgcttcaa
aaggcatcataattttcttaatgtgaaggtcagcagagagtcagcaagcgctgatattgaatgtgtcaaa
gcttttaggaagagctgtacacgataattgtggataataaatatttcccaggacaaatattttatgtaaa
taaaatagggttgctctggaagcaacctgtcaagaacttaaggcattcagactgtgtattgctgcttttg
ggtggaaatgttgcagggttcaaattaaagcttttcctaatttacaactcagggaacccaagaacactca
agaatgtgagcaagcattcgcttcttatttattatcaccataacaagacaccctggaggacctcagcatt
gttcgaagactggcttttgaactgttttcttccacaggcaagagaatattgtaagcaaaaaacgacttca
ttcaagattcttctgatcttagacagtgctccagggcacccacagcatataggtgacatgcattcttatg
gaaagttatgagtttgctgccaaacacaaccacactcaactcatggaccaaggcacaatagctgcattca
aagcacactatgccaggcatttgctccggctgttgaagtgaatgaatctggctgaatgctcctagagttc
tggaaaagttttaacattctaaatgctatccagaatatcactggagcatggaaagaagtcacacagcaat
gcatgaatggcatttggaaaaaagttttgaagacatgtgaacacattcaaaggccttagcaaggttctgc
tgttgatgaaacagtaacaagatactagtgcttggagaatagctagaattgatgaagaggatatttatta
acttcttggcattgaatctgaagagctttccaatgaggagataatcaaactggaggaagaaagaagttga
gaaagaggaagaagttatacctgaggcaccaagaaagttaacggcaaagaaactggcagagatatttgcc
actatcagcagtgccattcagaagttagaagaaagggatgtcattattcacaggagctgacacacagtac
aggatgctcttgcttgctacagagaaatatataatgaaaaggagaacaaactgtatagtccaaacctgat
gtcttcctgaagaacactatgcctgctaaaccattaacaagtatcgatgccccagtgccttctcccagct
actctcaggcctcatcagaagagaaattaatgaccctgttgcagtagcatccccatcatccagcaattaa
ttttagttcaatgcttcaaacattcttcaggcccagtatgcattcacctgtgtatgttacttaattgtga
gtacccatacaaccatactgtttytyactttcagtacagtattcartaaattacatgagatattcaacac
tttattataaaataggctttgtgttagatgattttgcccaactgtaggctaatgtaagtgttctgagcat
gtttaaggtaggctaggctaagctatgatgttcggtaggttaggtgtattaaatgcattttcgacttaca
atattttcaacttacgatgggtttatcgggatgtaaccccatcgtaagtcgaggagcatctg
>TIGGER5_A   transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttaytgaatactgtactgaaagtraraaacagtatggttgtatgggtacttgaagta
cggtttctactgaatgtgtatcgctttcgcaccatcgtaaagttgaaaaatcgtaagttggggaccatct
g
>TIGGER5_B   Non-autonomous DNA transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttactgaayayartacactgtagartayyggttgtttaccctcgtgatcgcgcggct
gactgggarctgcggytcactgycgctgcccagcatcgcgacagagtattgtaccgcatatcgcyagcct
gggaaaagatcagaaattcgaagtacggtttctactgaatgcgtatcgctttcgcaccatcgtaaagttg
aaaaatcgtaagttgggaaccatctg
>LTR38   MER4I-group; a consensus sequence.
tgtaaccgagtatcccagcctcaaaatgcattttaaaacttttttctttttcttttttgctttcagcctt
gaaacatactttgaaactctttgtttctccctttcccaccaggcacttccgtgaacagtgctcgcttatc
taattatgtgcttgcttagaaattccaggggccaattttgaaacaaaccaggcagagagacccagctgca
gaatcctcccgcttagggggagttatgaacagttagcccaccactaccgggctgaagtcaggatgatgca
aaccagacctccagacgggcgattactcaagatagccatcggaacaagacatgcagacctccaccctcct
gcaccactcccacatatttcccacaccttttccttcttaaaccccttcactcagcccaaaagtctgaaat
gtcttctttgaggcatgagcctggccatctcccatctgctagcatttgattaataaagctgctttccttt
caccacacctcgcttctcatgttttgagcttctgagcagcgagcagctggacttgagccagttaca
>LOOPER   Molecular fossils of autonomous DNA transposon - a consensus sequence.
ccttyagaayaycatcaggtcttgnannnnnttttatttttgagtttttahttgtaactatttdtaagga
tattttatgncntttattctttcaaagaacwrargaaanatgnctgaataaanctcantnnagctngtan
ttaannatagnntgaganatcttnatgancctattttttccattttgctatttyatcttnctaggaatta
tttcatcattactaatcaattatttctaactgtgctnwtataaaaagactaaaataataagaaaatggaa
gaatgataaaacctcctgggatgaaataaataaatcatcactatgacatcatccttcagttttcttactg
tgttgcccaaagtattgcattatctttcaagaaggtataaaagaagtctggagacaccatctttgtagtc
tttttttagctttcattgaacacagtcgagaattcagaatttttcattttctacccataatggcaaagag
aaaaaaattgacagaggaagacatttcacaattattagatgaatcagaagatgaatgcaaagagacagat
agcagcactctagactctaatgatgatggtgaaattgatcatataagtgaaatctcagactatgagtctt
cagatgacgatatcctagatgaattttctcaaactcaagaatcgacgagtgaacaatatatttctaagga
caaaaaggaaatatggtattctcatccagttagtcattcaacaggaaggacttcatcacgcaatattttg
cgacaagaacctggaccatcccattttgctaaaaggacatgtgacagtattctttcatcttttatgatgt
ttgtgcaccaaatttacttgatacagtttgtaagtggacaaatgctaaaggcaggtatgtttacaaaagg
taactggaaggaaatagatgaagagaaaaaaaaaatcattgaattgatcattctaattggtgtttataaa
tctaaaaatgaaaatgttttgcagttatggagcaaagaagatgtctctcttcaacaaaattatgagccct
caaaattttcaaaagtattacgttttgacgatgtaagtatggaagaaaagaccagaaataataataagct
agaacctattagagatgtatttgaaatctggaatcagtatttacaagatagatatgttccaggttcatgc
atgacagttgatgagcagttagttgcattcaaaggatattgcccatttcggatatatataccttcaaaac
caggaaaatacggaataaagaatggaattacaattttgggttataattcaaattaaaatttttaatgaag
tttttttacaattccttaattcttcttctgtaaattattcgtaaaatgacttaaaaataaaaaaataaaa
agagttcattggacccagatggtaaatggtgatgactgtttttccttggtgtaccgaggg
>HERVK22I   sequence of internal part.
[encoded data, 6887 characters]
actcttcaatcaacaaaacctgatgcaaaaaacagaaaagggggaga
>MER51I   a consensus sequence.
[encoded data, 7881 characters]
ctgcctcccataaagatttatggggatcacatctcwtyggggggaa
>L1M5_5   L1M5 LINE1 repetitive element 5' end - a consensus.
aaagagtttcacttctagaatggcagtgtgaggagctccatagacccactccccagtgaaacaaccataa
ctggtgaaaattatttttaaaaanncaaccatttaaagtctctggaaattgtcctaagggcatacagcaa
atgaaacatttattcaagaaaatctactaaatcttagtaagaacagtgagagtctgtggtatttgagcca
tgactgtctcccttcttcccccccccnasccagctcagcawgatagaaactccactccaggtkggtgcag
ccaagaacacagggctccctctcccctcagctcccagtcaagggctatggtatctncctaggaggagcag
gacatcagcatttctcatcccccccagctccatgttgcagaggctaaattccaggtgagtgtagctgaga
ggtcgggggctcccttcctccacccagcccccactcataggatggacttggctctaccngccaggtatgg
caggctgagaatactggggccctaattacccttaccccagctcgctcatagggnagaggttccatgccag
gagaggcaagccaagaagaccagaggctactrncccnncccagcacccagagcagtggctcagagatttt
gcccagggggagaggcaggccataagaacagagagctccaaagctctccccaaaggaactgactttattt
gcaacagagtgtgaggaagttcaagcctaagggcactctcaaaaacaatggagattttggtggtaagcaa
ttaagggaggctggtagctcnannanagyaacaagctaaaccataggccagctagtttaccagagagaac
cagggaaagagacagctaagaagagccctcctggggtcagaacaaacctcaaacactgacctcaaaaaac
tacccctgcctraatttaattggatcagactgtggagcaatttatgccccagggattgttgaaaaacaat
agagcaatcagccagcaattagtggagcctaacagctgggtgtgantacmnamngaggcagacagcttaa
cagagagatcagagaaagagacagtcaaagagagccctgctaaaaccactgtcatcccagggtgactgtg
cacatgcccaaggctgtgccctctgaggagcaacatcagaggctt
>L1M6_5   Subfamily of LINE1 repetitive element 5' end - a consensus.
gacatcagcaagatggcggaataggactttccagcgctcgtcctcacagaaacatcaatttgaacaacta
tccacgcacgaaaataccttcacaagagctaaggaaaccaggtgagagattacagyacctgggtgtagca
cagaaataagaaaagacgcattgaagagggtaggaaggacagttttacattacccgcgtcacccctcccc
caancccaggcagcacagcatggagagagataccctctgcttgggggaaggagagggaagtgagcacagg
actttgccttggaccccaaacactaggcccgccccagtaaaacccagtactaggcaggcccccatagccc
cagactccaggccagtacctacggactgagccgyaccagatcccacagcccaggctccaggcctgcctgg
tggactcagtctccaggcctgccccagcaccaggccaaccccagtgccccaggctccagaccggccccag
caccaggccagccccagtagccccaggctccaggctgsccccagcaccaggctggcccccatagccccag
gcttcaggcccaccccagcaccaggctggcccctrcagccctagtcatcaggccagcacctatagaccca
gcctccaggctggcccctgtagacacaggctccaggcctacccagcrccaggccagcccctgtagcccca
ggctccaggcccaccccaggytccagaccagcccagagccaggtyggcccacatagccccaggcttcagg
cctgccccagyaccaggtcagcacccctggcctcagaccttagccaggtaccaggctggcacctgtagac
acaggctccaggcctgcccagtaccaggccagtccctgtggccccaccctccagggcyagcccctgtggc
cccatgctccagcagacccagggttcaggcctgtcccagtagaccccagcactaggctagtccccataga
cccaggctccaggactgtccctgtgtacccaggtcccagggcagcccctatggccccaggacccaggcca
gccctcagagacctagcctctaggccagccctgcagacccagcctccaggctggcacccayagacccaag
ctccaggccatcccccaggttccaggccagcctcagtagctccaggcaccaggctagcacccacagaccc
aggctccagactagccccacgctaccccagcaccaggccagccccaggctccaggctggtccctgtggcc
caggctccagtggacccagggtccaggcctgctccagcagacccagggtccaggcccaccccagtagacc
ctggttccaggctagcccccatggactcaggctccaggaccacccctgcagacccaggctccaggccagc
cccyatggaccaggatccarggcccatytccccagttgcaggctccaggcctgccccagtgccaggccag
cccccatggactcaggctccaggcccatcccagtggacccaggctccaggcccatcccagyaccaggcca
gcccctgyagactcaggctcaaggcccaccccagcaccaggtcagcccctgtggacccaggcttcaggcc
agcccctatagacacaggctccaggccyaccctcatggacccaggctccaggcccayccccacagaccca
atcaacaggtccacccagtggatccaggctccaggcycaaccctgtggacccaggcaccaggcctgccac
ctgctgacccaggcaccaggccagcctgcctaaggactccagcagcaagcctgcctatagaccataccag
atggcctgcccagaatctctggatgactggtgaagggctttcccagacaaagccagtctgcaaagactgg
aataagtccctacttcttcaaatgtgcagacaccaatgcaaggcccaagaatcawgaacaatcagggaaa
catgacaccaccaaaggaacaaaataaatttccagtaactgaccctaaagaaatggagatctatgaactg
cctgacaaagaattcaaaataattgttttaaggaagctcagtgaactwcaagaaaacacagatagacaat
taaatgaaatcag
>MLT1I   (MLT1i subfamily) - a consensus.
tggccatgtgacttgctttggccaatgaaatgtgagcagaagtgacatgtgtcacttctaggtagaagca
tttaagagccagtgcgtagattcgccatrattctctttccctctgccatgagaccacaatgttccagatg
gaggctgctccatcagcctgggtccctgagtgaggaatgacatggagcagagccccagctgacctacaat
agacatgtaacatgagtaagaaataaacctttgttgttttaagccactgagatttgggggttatttgtta
ctgcagcataacctagcctatcctgactgataca
>LTR41   LTR from human endogenous retrovirus-like sequence.
tgtgccagttatcaatttattgcctctcagctccaaattcacccttattgcctgctctgtgaaaatggat
ctggaccctttaaatatttttcctttgccagctggcatgatgttaagctttgtcagtagagggcactgga
gagacattgcaggaggaaggggcttttcttcctggttcctgtgtgctgntgtgctwggcatgctcacttg
gcaggttcctgtagctcaggcytacagcttctccagtgcccagttcctgcagcgcacacagcttctctag
cacccggttcctgcagcatgtgcmccttctcaagcatgcagctctggcagtntaatcagcagtgtccagc
agcttcccccagcacccatcactcaggnggtttcacagtggggtgcctntggtgagatacctccctgtga
acagctttccctgacaccctagaggntggatttccnagaagttccacagggtrgatttccagcaagttct
gttagtgcagtaccacagtaacttctctgccatccagtaagccatagctgtgcctttgtccaacaagatc
tggatctcagccctggggggaaggttctctcctgggtgctctrtctcagccctaggggtagtggctgctc
cttatatctgctattcctatattctttagagttctctttacctcttastagttaattccctgttatagtt
aatatttatattaaacttttcctgttcaaattactgtgtggtttctstctcctgattggacccagacata
tag
>MER52A   Long terminal repeat from MER4I-group retroelement.
tgatggcagcggcggcccgtctggagtggccgctgccatgatgccggctgcagcgggggaggcgcggccg
gggctgcgcgctccatggagccagcgggagccgggaacaggcgggagccccgcccccttccgagttgggg
cgggagctccccgggtgcagctgcagccgcccaaacgcagacccaggcctccctgtgctcttgggggccg
ggagcaggcaggagccccaccctcccgggcacagctgcagccgcccagccgcggctscggacccaggcat
cyctgcgctctcgggggcctgggaaggcccccctgcccccacaggcttggaagtgcctgctcccactgca
gctggcctctccccgctcccggcgcccgctccgcaggctcagaagtgcctgctcccgctgcctggcctct
ccctgctccyggcgcccgctccgatttcggagcaaagttgyggccgagcccgggcgctgtcgcaacccgg
ccgggtgtgtgcacgctcggggcagcgctgacacgccagccccctgccgcctcggccccctccggacttt
gggcgccgacgagcatgggagggaggccgagggggggctgagggcagctcggcgckggcctgcaggcgcc
cctcggcacgaacagcctgggtgccatgaacggcagcaggaggcagacaggctcctgggcagaaaggggc
gggtccccggtgaaaccccaccttcaagccagggacggcctgaagcctgggggccgggctgccagttccg
ggtggagtccgcggmccggagtgagaacttrtggtgctttttctgggcccacccatggccgcccatggac
caatcagcacgcacttcctcccctctgargcccataaaaaccccggactcagccagactyagrcagaygw
ygggacgaccagctgcagagaggagctacccactccggggtctcctctctgctgagagctgcasagwcgw
cgggatgacctgcctgcagagaggagctacccactccagggtctcctctctgctgagagctgaacactcg
tcgggacgmcctgsctgcggaraggagctacccactgcgggtctcctgagagctgttctgtcgctcaata
aagctcctcttcgccttgctcaccctccacttgtccgcgtacctcattcttcctggacgtgggacaagaa
ctcgggacccaccgaatggcggggctgaaagagctgtaacacaaacagggctgaaacacgccccctgctc
accacgttgtgggcgacgagaaggagagaagagctgtggcccttcggggagcccagacctaggagctccc
cgagccagggctgtgacaccctctttggggctctgcggttcctggcgtctccaagcttctgggcgccacc
gcgttccccggtgccmrcwgtggaagctgcttgcggtacgcctggtccagccgcagccttgcacggagcc
ggcacctgtgccggcgcctggagctgcctgccccgccgcagccrgcgtgcctggctgtgcgcagtggccg
gaccccacgctcgcttgctcacacacccctcaccgctccgcgcctggctcgcccttggcaggcatgggat
ccaggccrgtagcgcgagcygagcgcagcctgccaggccgagtgggcggaatgagcccagcgggcccaag
caaaactcgggcaaaggcgccaccggccacagaggtttccggctggvraagcgacaccccaaggatcccg
tgaca
>MER52B   Long terminal repeat from MER4I-group retroelement.
tgatggcagcggcggcccgtctggagtggccgctgccatcatgccggctgcagcagggaggcgcggccgg
ggctgcacgctccatggagccagcgggagccggggacaagcgggagccccgccccttccgagttggggcg
ggagctccccgggtgcagctgcagccgcccaaaccgcagctgcagacccgggcctccctgtgctcttggg
ggccgggagcaggcaggagccccaccctcctgggtgcagctgcagccgcccaagccgcggctgcggaccc
aggcatcyctgcgctctkgggggsccaggaaggcccccctgcccccacaggcttggagccgcccgctccc
actgcagctggcctctccccgctcccggggcccgctccgcaggctcagaagtgcctgctcccactgcctg
gcttctccctgctgccggcacccgctccgatctcggagcaaagttggggccgagcccgggcgctgtcgca
gcccggccgggtgtgcacacgctcggggcagcgctgacacgccagccccctgccgcctcggccccctcca
gactttgggcgccgacgagcatgggagggaagccragggggggctgagggcagctcggcgctggcctgca
ggcgccccttggcacsaacagcctgggcgccatgaatggcagcaggaggcagacaggytcctgggcagaa
aggggcgggtccccggtgaggccccaccttcaggccagggagggcctgaaggctgggggccgggctgcca
gtcccgcggaccrgagtgggaacttgtggtgccttttctgggcccacccatggccgcccatggaccaatc
ggcacgcacttcctcccctctgaggcccataaaagccctgggctcagccagagcwgagcagacgacggga
cgaccagctgcagagaggagctacccactccggggtctcctctctgctgagagctgcasagwcgwcggga
tgacctgcctgcagagaggagctacccactccagggtctcctctctgctgagagctgaacactcgtcggg
acgmcctgsctgcggaraggagctacccactgcgggtctcctctgagctgttctatcgctcaataaagct
cctcttcatcttgctcaccctccacttgtctgtgtacctcattcttcctggacgcaggacaagaactcgg
gacccaccgaatggcggggctaaaagagctgtaacacaaacagggctgaaacatgccccttgctcgccac
gttgtgggcaaagagaaggagagaagagctgtggcccttcggggagcccagacctgggagctccccgagc
cagggctgtgactccctctttggggccctgcggttcctggcatctccaagcttccgggcgccaccgcgtt
ccccrgtgccagctgtggaagctgcttgcggtgcgcctggtccagccgcagccttgcagagagccggcac
ctgtgccggcgcctggagctgcccgccccgcwgcagccrgcgcacctgactgtgcacagtggccggaccc
cacgctcgctcacacacccctcaccgctccgcgcctgactcgcccttggcaggcatgggatccaggccgg
tagcgtgagcygagcgcagcctgccaggccgagtgggcggaacgagcccagcgggcccaagcaaaactcg
ggcaaaggcgccaccggccacagaggtttccggccagaaaagcgacaccccaaggatcccatgaca
>MER52C   sequence.
tgatggcagtggctgctgccatcacgctggctgcagcagggaggcgcggctggggctgcacactccatgg
agccggtgggagccccgccccttctgagttgggacgggagctccccgtgccactgcagccgcctaaaccg
cagctgcagacccaggcctcctgctccacggagcaggcaggagccccgccctcctgggcggggctacagc
cacccaaactgcggctgtggatccgagcctccctgtgctcttgggggagccgggagcaggcaggatctgc
cytcccgggtgcagctgcagctgccscacccgcggctgcagacctgggcctcycactccaggragcaggc
aggagccagggacaagcgggagccccgccccttccgagttggcagggcgggagctcccgggtgcagctgc
ggcctaccctcccaggcgcaggacctgggcgtctctgcagcctgcacccttggggggcccaggaaggacc
cwccccatccctgcaggctcaggggtgtctgctcccactgcctggcctctctctgctcctggcgcctgct
ctgatctcggagcggggttggggccaagcccyggggccatgaatggcagcgggaggcagacagattcctg
ggcggaagggggcgggtccccagtaaggccccaccttcaggccagggagggcctgaaggctgggggccgg
gctgccagtcccgcagaccagagtggggactcgtggtgcctcttccgggcccacccatggccgcccatgg
accaatcggcacacacttcctcccctctgaggtccataaaagccctgggctcagccagagcagggcagag
gatggccagaggacaaagrgggcagagagacaatgggacwggatgaccagctgcagagaggagctaccct
ctctgctgatagctggagaygatggracgaccagctgcagagatgaccagctgcagagaggagctaccct
ctctgctgagagcttcagagacctgcagagatgacttgcctgcagagaggagccaccctctccagggcct
cctctctgctgagagctgaacactcgatgggacgacctgcctacagagaggagctacccactcctctgag
ctgttctaacactaaataaagctcttcttcgtcttcttcacccttcacttgtctgcgtacctcattcttc
ctggacgcaggacaagaactcgggcaaaggcgccgcggccacagaggtttcccgccagaaaaatcgacac
cccaragatcccgtaaca
>MER94   MER94 repetitive element - a consensus.
tagggtgaccatataatttatcgtccaaaccgggacacttttgagagtgaaagggggcgctattaataat
tacgccaggacaacaggyataaaccaggactgtcccaggcaaaccgggacatatggtcacccta
>CHARLIE6   Primate CHARLIE6 repetitive element - a consensus.
ttgcttgkgcccaktttcggkcwgtgatgcaagatangggaagctantgntaantggtgagtgctgcatt
acacagamgagaggggcggtaaaccgatgacatnagtttcccctnctccaattatttcccccagnctccc
cttatgcgntgccggntgacttaaggaacgaacaacctncgctagtataacgaaaatcagagggaatttg
ttttcattctaaggaaggagtttttacgtgccgcanctcagctctctncctgmcactttgttgttaaaac
attgcaaaacgtnggttcaagtaggctagaagtgaattgtncagtgaagttttwttanttttgagatttt
cttgtttangtatgcttttwtgtttttcttttaactaatgtttgtgttttataaacatgtctganagccc
aatgtggcaatttttgaaggcgagatgtgagatggaagaggaagwttctaggcctgggtctacggacaat
tctgataaggntagtgatgaaggattatagccttctgagtatncttcagtgtactagtgcaacaagggac
acaganaaagtctatctttacgacgaaagccacttatcaakggttttatatgggctggtagtccaagctn
tcttattccattgtgnatcgtctgtggcaaacaacttanaaangcagcaatggctccagcaaaattgaaa
aaacaccgtaacnataagtcacagctatttgacaagtaaagatgntgattatttttaaacggcnattgga
ctctcaaaacaaacgagtaaagctttcgttcaaaaawnacntttagtgaaaaggctcaggaagcaagtta
tttagtagcagaacttattgcccagaaaaggaaaagncacanggttggtgagaacctaataatgccanca
tgtaaaattacagtgaatcaaagcctgggcaagatgcagtacgagaaattgaaaaggctccactctcaaa
cagtgcgataagntgacgtattgatgacatgtcacatgatgcnaaagaggttttgtgtaataaactgana
aatagcagcttctctatccaggttgatgagtcaacagatttcactaatanatgtcatgctgtagcatttg
taagatttgtaaaggatggtgaaattcaagaaaacattttctgctgcaaagagctgcccaaaacaaggaa
aggccaagatatanttaatgttttgacttcatatctgnaaaccagaggtctmagaaccgcgctgncatct
acactnatngtgctccgtcagtanttggttcnatgagnnattttgcgttattaaataaaaaaagagaagk
cctknttttcacattacagcacactgctttctccacagagatgctgatgtcaaaaactcttggagataca
gtgaaagttctggataatgttacaaaactggttacctktattaacaaaggccaatttatgcgaaaatktt
aaaaaaaaaaaangagacaacctnggcagasagcacataaacctcctgcaccatacagamatccggtggc
ttmkcagaggaagcgttctcwacagggtgtttgagttgaagggtgaattnccagagtactttcaawanan
ggccggccagnttttgctgagtgctttggaatgaaaaatggctgcagaaagtcgnctacttngcagacat
ttttcatcacatgaaccagtgaacaagtctctgcaaggccctggagaaaatgntttkacttcgagtgaca
agatttttggatttaaaaggaaactgaatctttggaaaagtcatgttgcaaaaggaaatcttgaaatgtt
tccnctgctgcttgggcttgagagtgaggaaggatatcagcmagtctcaagtcttactgaaaaccgcctg
gaagaaccgcagaacaaaacaaatggcattttccctcccnttcaacacaagtgtgtggctaggtgaggga
ccctttctctgaatctgctcagcctgagaacctggctttgagagaagagaaagnactttgtgagttgcgg
tctgatcgcacattcangatgagatttcctkatttttaccctaggcgcgttctggatcccwgtgamagaa
gmmtctcctgccactcgcaggaaagcagtgggcatktktgccgwgsttctcmacctcctkcatgtkgswk
kaacaggctcgctcacgttttactaagnatcaagagcaagngcagaaatnnnctcatttcagttgaaaat
gaaatctttatgtagctgtstsawgctcgatcmataattgagtgaaataaactgatcattaactatgtac
aggtttcatgtgagagagtaacatatttttagtttaagtttcaaaaacaktgttttagtctatgcatgtg
taagcctaaaacagagatcaagaaactaatgtacatatataaaaatattattaacttctaggcctgtatt
tnnacctgatcatgtnactcagtaagaaatgttatnttttcaaagtcttatataaaattgtgcttaggct
atattttattcatatttctttgcttacagttttantagctttactattcaacattgccaataaattttca
tgttgtaaataacattaattaaaatcaatttanaatatttatttaaattaaatctaccgagcctactttt
agaaaaattaaattccattttgnctcaagccagttatttaacagaaatttgcttgtcttatgttttttta
atttatgaaaangaaagaaagatwatttcaagaamagtaagctawgtctaacawcttttttctaggtaaa
akttggmtagawggtmactcttakcttcwaatawggaagaatgtamaactagtcttgtatgtwcmatgt
>LTR39   Primate LTR39 repetitive element - a consensus.
tgagacggagcagggaccccctcttaggggcctgcngggcactccccccccaagcatggaaataaaggaa
aatcttgagttccttcaagggaaattccaggcacctagctagccctgagaagtaaatgagcaacttgata
agcaagaaggtaatagtagcttaaaacaatagccaaggaagttagagtcacgrgatgtttggttccccta
tagaaactaaagataacatcttaacatatgtccctgagttgtttttcagaaacccggacccccaccaaat
ggaaaatgccatccgctggcacgtagacctcagataagggggaactgaggactgaactctgaccaccgtt
ctttgttctaaatttcttcctgaggggcctggaggaagtcacgcccacgagccagagctaacattctttt
ctgctgaccccaaatttttagacaaagcttcgcttccttaaccaatcgcaaatcagaaaatctttgaatc
yacctatgacctgtaagcccccgcttcaagatatcccgccyttttaggccaaaaccaatgtrtaacctcc
atgtattgatttacgattttgcctgtaacttctgctttcctgaaatttacccctgcctttaaaaaccctt
acctgtaagccatcggggaggtcgggtcttaagcgtkagctgcccgattctccttgcttggcgccctgca
aataaacgccttmctttctcccgctgcaaaatctcggtgtsgatgtttggttttactgcgccgggcgagc
ggaccccagttcggttcggtaaca
>LTR40A   Primate LTR40a repetitive element - a consensus.
tgttgggagacaattctccatgggtctctcgcatttctgcacgtcttgtgagcagaggcactgactgcct
ttgttctggactatcttttcaaggatgtttgtatagcgaacagccttggaagatagagatagtgtctccc
tctggagcaaagggcaggtttgcttactagccttgnaarataaagataatgtctccctccggggcaaagg
gcaggcatgcttactgcccattataaaagattngggtttcctaagctcggggttcctcwsctgtracgca
aacccactgcgtgtgcagnantcatctggsccccttcgcatcgccctcgtgggacttgggggncaagggg
aactgacgcaaacatgatgctcatgctgcctgctgtgctgtgartaataaagtcctttgtctctgaccca
ggagtctcgtgtcttctgccagcatccatgaaactgtggcaggctaacttgttagcttgcaagtagggta
aaatctcagacccttcacagttcttgaca
>LTR40B   Primate LTR40B repetitive element - a consensus.
tgttgggagacaattctccatgggtctctcgcgtttctgcacgtcttgcgagcagagcactgactgcctt
tttttctggactatcttttcaaggatgtttgtatagcgaacaaccttggaagatagagataatgtctccc
tctggagcaaagggcaggcttgcttactgcccattataaaagattcgggttccctaagctcagggttcct
ctcctgtaacgcaacccactgcgtgcgcagcatccayctgggcctctycgcgtcgcccctgtgggamttg
gggggcaaggggaactgacgcaaatgctgatgctcwtgctgcctgctgtgctgtgagtaataaagtcctt
tgtctctgacccaggagtctcatgtcttctgccagcatccatgaaactgtggcaggctaacttgttagct
tgcaagtagggtaaaatctcagacccttcacagttcttgaca
>HERVL_40   Primate HERVL_40 repetitive element - a consensus.
[encoded data, 5609 characters]

>LTR9B   Primate LTR9B repetitive element - a consensus.
tgttgtaggagttattaagaaattattttaggcagatagagaggaaaaggggtccttgggaagttttcgt
ttcttttnaaagcagctccagaaacatttcttgtctagcagaaaagccccggctcttagagccaggccgg
caanctttgatatgcaaatgcaggccattagaaactgggtccacccaacatggcgattcccaccgtcgtc
ttcttgcccttgccccacatgtgcctggcaacatggccgcccccacatatccccacgtgtgtagaacatc
atggcgccctgcatttgcatattaaaaggctagggtgggagggccagttttttcgcgggctacgtgaatg
acatgcctggtcaaaccaatcccctgagccctatgcaaatcagacaccgcctcctccagcctcctcatat
aactggctgntwtccgccgcacncggggtttcctctctcggctttggagcccccctccctctgtctctgt
acaggggagcttcttccttctttcttctcccttctttcttgcctattaaactctccgctccttaaaacca
ctccacgtgtgtccgtgtcgttttatctaaatcggcgcgaggaccaaggaccctggtgttcctccastca
tcggagccgtatca
>HUERS-P3   Primate HUERS-P3 repetitive element - a consensus.
[encoded data, 9017 characters]
gttagggttaccactccwgagggggggaa
>HUERS-P3B   Primate HUERS-P3B repetitive element - a consensus.
[encoded data, 7524 characters]
>HUERS-P2   Primate HUERS-P2 repetitive element - a consensus.
actgggggctcgtctggaatcagcagcagggtgatktacagatgwggaactgtcggatgtgcctcttttc
taagaccctgccacctctctttcttntgggtaaaaggctntgtttcccttcacagaggtctcgctgkcac
gcgggactggagcagagwcctggggcwactgaaggcatcwtttgctggaaggccccgasactgaactctg
tcggccaggacccccagacttcgcttggtgtnttttctctctctcacagtttamaaatggctcttatctc
ctttataatgttaagngttttgctacaggctgcggcaatgttactaagtanaatgagcatttggctcagc
catcaaaggtgcaaatcagaacaatgtggtttccattttttcttagaggtgccatscttgcccccaccct
ganagccacaggcgcgcacggcgcagggcacctcccctccttaccccctcccctcccggctcaggcgcct
gggcgtgcccacggcatgcaaaagccgcgcccaacagccacgaagggtgggagaaaaccgaggctgccgc
tgggaccccacggggctggctggccggtgcctcctctcagccgcgccaanggaacctttcctnccctggc
caaggaatncaaactagtctgaaccggggaaaggatacaataattaaagggacncatttgcactgagcaa
ggggttcttccccccgactmccccctttttgncctttaaactgtttttcttttttccttttctaagtgag
agggttccctncccakcactctgcttctgatagggaagttaacagaggassagcgacccctgctggcgga
tagctgcaaattcggcagggcncatttgagacaatctaaacagatagatncagcccctnaaatatctttt
tagtcccaaacttgattccaagcttcaggttgaggccctagaaagaaaaancagatctgagggatccaaa
gccaggcaacaggcacaatgtaaatgggcaggaccaattcctgctgactaaacccccgccccatggaagg
aggccatgctccttggcataaacgaggcccagggaactcaaaggttgtcgacagcagggaganagggagg
cataggcgagggcggatcattcctwntctccgggccttccctgcttcatggatgaatgccacattngcac
ccatgggtggcacctgccaaggtcaccgggactcggggataaaaagtggaaanngaaaggannatgctcg
ctttctctccccatcacaccctgagttttcactgaaagaaggaagggaaatgagggacgcctctattccc
tgtctttcagaacgggcaaccagctctcttcaccacccccagcttatactcctctggagtgtatcctgaa
ccattgggactgctttgaccctcggaatctgnaggaaaaacgcctcatagccctctgcacaaaggtttgg
ccaaattatgacttacaasaaggactagcttggccttaggaaggaaccgttcattttgataccatncggc
tgttggaccttttctgnaaacgtgaggacagatggtctgaggccccatatgtgcaggctttctatacctt
gcagggcaatccagacctttgccgacagtgtaggattgatccagccctcctgtttgccatctcaggagag
gctgcaaggggcaatcccagggaactaaagawacgagtcccagaggcacccccagcagagaagccagctc
cctcnagccctgctcctccgggtccaccctgacctccctatccagcttcagcctctcacttgccccctcc
tagaaattctcaccctagacaagccccggtctcactcttgctcctccaacagatgcctggtgaatttggc
cccagtaaggtccaggtccccttctctctacaggacttaaagcaaattaagggggatcttggcaagtttt
cagatgaccctganagatatatagaggctttccagaatttcanccaaatatttgaactctcctggagaga
nagttatgttacttttgaatcagaccctgatggacactgagaagcangccgctctgcaagcagcagagag
atttggggatgagctttgtatnacatatagcatcaggaaagggggcgaatnttatccaactggaagagaa
gcagtaccagtgaatgaccctggatgggatcccaatgatgagatgggagactggangaggagacactttc
aggtgtgcataaggagggcttacgtaggactaggaccaaacmcctsaactataccmmgttatccatgatn
gaccaggaatttgatgaaaatctcattgccttcttggaaaggctaagagaggccttggtaaagcacacct
ctctatctcctgattcagtcgagggacaactaatcctaaaggataaatttattactcaggcagcccctga
tatcaggaggaagttgcagaaacgggccctgggaccagatagtactttagaggacctcctgaaagtggcc
acctcggtcttttacaatagagacagaggnccaggaccttgagttcagtagacacaggnaagagacctgg
gaagcttnagtagccaccgtgtaagcccacaaaccccagaantnccaaggtgnacctgttaactgctaaa
gatatggcaagaatagttanctccttctaaagtttatntgctctcgtacaagstttaatttcttncacca
gggstgacccaamasctcagggtacaatnttgctgttagtatatttcacttcttatttctgtaatctttg
gcactanattctttccttgtataatacacgtttaacccatgcatacttaaccttatagaackkgtttttt
ttttttctcacgcctagaggccatcaaactccaaatggncaggcaactgaagcctcggacaatgactccc
ctttgccaggaacccttagatagacctctgggagaaatttgactgccgttttccccaaaacaacgccccc
tgtcggcaggaagtagctaagaccggtcatcgtccatattctaatggcagttagatgtgcctcttcagag
aggggaaa
>ORSL   Origin of replication-like (ORS8) region (a consensus).
ycccatacygtttccrtcactrgtytgwgcaccctctgcarggmagacagcatgayttttyatctttgaa
tycyyaaaasttagctcactgtgtgctcaaacgtgtattgaatgacagttgctatatttgaggacbacat
agattttggggaagacggacaggcacactagcagaaccatacgaaggccaggatcagtcatgaccagggc
tgcattatgacttgtgggccctgagcacttttgcttttatgggccccttcctccataaaaatattaaaaa
ttatattttatgactgcattggtataaagatgagaatataatccaggctgaattaaaacattttcttaga
ctctaaaatttcatttttttctgattttaaaagaaattaaaacattttyatggggccctaaagtattgtg
ggccctaggcactgtgcctactgtgcctaatggataagtcnagcctgaccagggcactctggtgtgaggt
tgaagaaaggaaatttggaacaaagaagccaagtgctctggagaagcaggtgaaacttccactgccgaac
aaaatcagaatgggagcagccatggttaataaggttgtggaagtttagascttccagttcacttcmcctt

>LTR20B   Long terminal repeat of endogenous retrovirus - a consensus.
tgagagaggagaaaggaagaaactggtcaggcaggcagttagggtgggtcctcggttgaattctttcaaa
caaaagaacagcctgcaggcacagataagggaacttgcacaggggggcttgcctaagacatgcccacagc
cgcacagataagaaaggctacacaggagacttgcccagacatgcccgcaatggaaaattccgtcccctga
cacatgtgcagtaaggggaacaaagcaatatggagtaactcaagctaagggcccgcatgcgcactaggag
gatggggtggagctaccagaaattcgtgccttatgcaaatgagacacccagccctcatcggtttcttata
aaagcctttgcattcaactgtaaaaatggcaaccctcttccgggccccctctccgcggcggagagctttc
ttctttcgcttattaaactttcgctccaacctcaccctttgtgtccatgctccttaattttcttggtcgt
gagacaaagaactccgggtgatacctcacaaggagagactgagagactgctacattgtggtgcattggcg
agactaaca
>HERVG25   HERVG25 LTR-retroelement - a consensus.
[encoded data, 7096 characters]
>LTR42   LTR from human endogenous retrovirus-like sequence.
tgtagggtcccccagnctttcccctcctttctttctctgtcctgaccgaaaaacagantgccttgaccac
tctgtgacccagccagctgcaggtttttccctgcaggcttgaacccaagccagggccttgaacattccca
ggcactgataaaggtatttaggttgttgcccaaaacactgaaagaaactagccccggccctgagccaaat
tccttaaaccctcatataaactccataccctgaccccctcgctgcagacatacctaggtagaacatccct
tttctctcactgtccatcttgaggactgctgcagcccactctgtaggtaagttcccctaataaatgcttt
ggactgatcaccctggcatttagtgcttctttctttggaatcccaactggccccatctcagganggtttg
gggyactcccttgtgggaactcccctgccactgcttttggggcgactccagccacaggttcagcgggatr
aaaca
>LTR43   Putative long terminal repeat from endogenous retrovirus - a consensus.
tgaggcaggataggtagtcaaggaagtaaccatgtccttgggacgcagcaaccgtggtgaccatacagtc
aacacaataagccccagcattcgcattgtagtcgagctcattcaagcaaagctatcttcagtagggamtt
tcccctgtagagagcatgcgcattttgattttacctgtcctcaaactgaccctttgctcattataatagt
aaaaaacacaacccctgggtggagatttaagatgctaatgagacatgcgatgtatgaacaagcatgtaca
gctactgcgcatgtgcacccagaggaccacccagaacatgcttactagtaacacctctttcccacctcct
tatgaataatcatgtaagactcccataaagggagtctcccyagcgccartcwwtgctgtctcatccttat
gagcagcccgccctgaattctctctctcagggtgtactgtctattctgcacctaactttcaaaatattct
ttttcytttgcaataaattrctctatgctgcatctcctttgctgtgtgtctcttgtttaaattcttttaa
actaagaagacaagaaccgaggtmtcacaacagccatcaaca
>LTR44   Long terminal repeat of LTR-retroelement - a consensus.
tgataacctacargtcacatttggcaggcttccaaattaacccacctcagggaggtcttgtgattcatgg
ccacatcctgtccctgagtaaagaatcttgtgagttcctcaaattttatcgtgagttcctcaaattgttg
acgtactgattaatatgtaacctactgacattgaaaaggacactgatttgtttctgaatcataaagtttt
gctgatttatttntgaatcataaagttttactgattgttttacatatagacattttagcctgtatgttgc
aatctgtagccaatgattataacctctgtattgtaccctccaatraaaaaagacaactccgatatgagga
gttcccctcccttctcctaaactttcttataaaagccttccaacttgtaamagacttcggaacacwccca
actttgttggtgtgtcttcccaggtcaatcctcacatttggcttccaataaacctttatcaaattatttc
tgcctcaacagccttaatttcggtcgaca
>MER95   MER95 repetitive element - a consensus.
tgtttaagaaaataaaaatggaggccacagtttagatataccccaaggccaaccgcccatagccacgtaa
ccaaaatttaagtcatcctgatttccccaaaacgctagctctaatcataaacataacacaaaacgtaagc
tttacatccttgtcagcgtgattcagtgaaattaaaccaatcagctatagacaaatcagcttaaacagct
ctacttgccctaaaaagaatgttaatgtataacagccaatcacgaaaaaggtcaaaatacttcctccttt
atgctttataaactgtgctatgactgccgtragnngagcttcttaccactttcrgyttgargtctcccgg
ttcgcgarctgtwctttctctyattgtatgcacaataaactttaaaatttttcctaacttgatctgattt
tawttttgaca
>L1MC5   3'-end of L1 repeat (subfamily L1MC5) - a consensus.
aaaaaaaaaayacatttctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatga
gtaccctyaggacccagattgtggtctctaaataccatttcccactaaaaggaaccagggctccttggag
aaatggctaattccaggtctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagata
gcaaggaagctataaaactactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgg
gacaatttgagcatcaataataactgcaatttaacacatcaaatatrtttaaatccatgagtttataata
aaaaaatctaattggtcacctttggagtgatgctagggaaccaactcattattttgaaaactggtaaata
aagggaaagaatcaagcatttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwga
tgagggaaatttctctttatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcac
cattttgcaacccctaatgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaac
tarasatytgcctcctgatggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatca
aacctgaatctgatcaagcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatg
ttaaatgacaccatrgggatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaac
ttttcttcaacaaataaattatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaa
agacatatcaaccaattacaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaa
atatatrtgtatacaattggaaatttgaacactgactagatatttgatgatattaaggaattattgttat
ttttaggtgtgataatggtattatagttattttataaaatagtccttatcttttagagatacatactgaa
atatttatagataaaatkatatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtg
gagctatagatgaaacaaaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagt
tcattatactattctctctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgt
tggacattaatttgttggcaa
>MLT1J   (MLT1j subfamily) - a consensus.
tgtggcagagactgctagttgtcccccaatatccattctccccttcttccttagtaatagaamccccaat
ttttagctgggcacatggccacccagaaataaagactacatttcccagcctcccttgcagctaggtgtgg
ccatgtgactttctaagttctggccaatgagatggtaagcagaagtgatgtgtgcaacttctaggaaatg
tccttaaagagaggggcaygcccttcttttccccttcctccttcctgctgcctggaatgtagatgtgatg
gctggagctctagcagccatcttggaccatgaggtgaaagccacatgctaaggatggcagagcagcaaga
tagaaggagcctgggtccctgagactatggagcagagctgccataccagccctggactgcctacctctag
acttctatatgagagagaaataaattctatcttgtttaagccactgttattttgggttttctgttacttg
cagctaaacctaatcctaacayacca
>HERVFH21   HERVFH21I endogenous retrorvirus flanked by LTR21s.
[encoded data, 6603 characters]
acctattaaaaggctggaa
>ZOMBI_C   transposon - a consensus.
caggtccacaatcccttatctacaattctaaaatccaaaaagctctgaaaactaaaagtttttttataat
ttgaaactcatttggcagcaaaacctgacctgaactgatatgaggctatttatagtctttatttatccca
cttagtgtgaatattcatatatttcactgcagaaatattaatgtgtttgattatagggtgctgccccaga
ccccactgggggtgttatataatatatagtatatgcactatattacctttctaaaatctaaaaaattctg
aattctgaaacacatctggccccaaggatttcagataagggattgtggacctg
>L1P2_5   5' part of L1 subfamily - a consensus sequence.
ataaaaaaattaatgagaagaggattctgggaagatggcagagtaggaagcaccaggaatctgtctcccc
acctagacaacaattgcactggcagaatctgtctgatgtaactattttggaactctggagtctattgaag
gcttgcaacttccaggggaaggcttggatggtaaattgtggttaatttcggtcaatttcagctcttagca
cagtagcagctacccatcccccacccccagccccgtggcaggcagctgtgcacgtgttcctggagcagct
tgcacacagcttgcgggagccagggtgggcaaaaaggatcctgtcctccaaatatcggggatctgtgctc
tgatcgctgattgctgcttctgatcacagaggtgcagacaaagaggtggcggccattgttgtcgcacctc
ccyccattgttgcaagcccctccccctctggctgaagtgacttccaggggatttaaagggctagtaccct
ttctccgctttatttttcttttttccccttttgggagccagacattaaagactaggacattcaaaagcaa
ctgcatatacggggaaaattagaaagtcaccgtgcatgcccagggaaaggcacaggctcagaaaagacct
gagaagaccttaagtttacacctcaggctgatccttggcacagagacagcctacaacaataaaaacaaaa
caaaaaaataacaaaaacacagcaaaccctggggaagagggagaatctgatttccagagttaccacatta
ttagattcaaatgtccagttttcaacaacaacaacaaaaaatcacaaggcatacaaagaaacaggaaagt
atggcccattcaaaggaaaaaaaataaatcaacagaaactgtccctgaaaaagacctgatggcagatcta
ctagacaaagactttaaaacaactgtcttaaagatgctcaaagaactaaaggaaaacgtggagaaagtca
agaaaatgat
>L1M7_5   Subfamily of LINE1 repetitive element 5' part - a consensus.
tgcaaggtgaaatgaaaggacactagacagtaacttgaagccgtatgaagaaataaagatctcagtaaag
gtaaatacatgggcaattataaaagctagtattattgtaacwatggtttgtaactccactttttgttttc
tacatgatttaaragactaatacattttttaaaaattattagtctaaaagctagtattattgtaattttg
gtttgtaactccattttgttttctacataatttaaaagactaatacattaaaaataattattaatttatg
tttttgggcacacaatgtataaagatgtaattttgtgacatcaataactgaaaggggtggggayagagct
gtaaaggcagagtttttgtatgttattgaagttaagttggtataaattcaaattagattgttataacttt
aggatgttaaatgtaatccccatggtaaccacaaagaaaatagctatagaatatacacaaaaggaaatga
gaagggaattaaaatatttcactacaaaaaaaatcaactaaacacaaaagaagacagtaatggaggaaat
gagggacaaaaaagctataaggcatat
>MER96   Primate MER96 repetitive element - a consensus.
cagggccgggactagggtgaggcaagtgaggcgcctagggcgcaaaatttaaggaggcactcactctcag
ggtcgtgcaagtgcagggtcggcatttgcacgaccctgagagtgagtgcctccttaaattttgcgcccta
ggcgcctcacttgcctcaccctagtcctggccctg
>LTR45   Putative LTR from retroposon related to the MER4I-group.
tgtaaccgcgggaccagcccaaactgggcctactctgttgataacaaaatgtcaagttaccttgtaggta
taacagagcccaaaactgcaagtcatgtagcccgggcatgtgcaatagaaaaagctttgacctctaacaa
cacccagaaccaatgattcctcccctcggaaccaagaagaccgggacatgaccggaacctgaatgccgga
actctttcagaagcaaaggggtccgttggcccggaagatctggggctaaaatctgcctcaacatacctta
ccgtaaatggtcaaatttgaagccctccaatcagaccctgccaagccaacattcctaaatcctttccctt
gccctctgatcccttaaaacttgccccagaccccaaatcggggagacagatttgagcccacctcctgtct
ccttgctggccggttttgcaataaagcctttcttttctcaaaagctggtgccatagttattggcttctgt
gtgcatcaggcagcaagcccatttgctcgataaca
>LTR46   Putative long terminal repeat of endogenous retrovirus - a consensus.
tgttagtccaaactgcaccattttgtaagctccctgctattttgcagaccttggtcaaagtgaaacattc
catgggggttcrggccgtgagaaacatcctgcctaaccacctgacnacaaggcggacaaaggcccactga
agaaacatccctatcatatcntgctgggcaaagatccaaggaacaccacgatcacatyctnctggaanaa
gggccagaactgcctcatcataggaacatcttatcaatatcctgccgggcagcaagccatactgcccaga
cccctcccacccagacctataaattgccccagcctgtaagcagtggtgggctctggcattaagctggtcc
cccacytyyrcaggttttntgctggatataaaacctgcatttgctgtagagctgccctctctctctctct
gtgtctttctttaaccctcaccttcccttcaaaacctaaca
>MER97   MER97 repetitive element - a consensus.
caggcagtcctcgctttgcacggttccgatatgcatgaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccacggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactacataaataacagatgcgcatcatgatcagtga
ccaatcacatcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattcgaatcaaacgtaaatggagttatagaagaaatagctgaccgtgggaatgttgacac
tgccgccatttgagagactctagatatgcagccagaggaacttagtgaaggcgaacttatcgacataaat
gaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaagtgacgccagcaaaaaacttcacat
taaaggaactcttggagatatttcacgacattgaaagcgcaaaggataaaatgttggaagctgatccaaa
cttagaaaggagtatgacaatttgccaaggcatagaaaagatgcttactccgtatcgtaagttatataaa
gaagaagaaggcaagcactgttcaaactactcttgataagttttttttggtttgttttgataagtttttt
tacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattatagtgtactaaataaatat
tagttttattatttttttcattccctatacatttataaccgacggtaagagagtttttaatgtttttgac
aaaaatttttaaaggtcacggaacaattataattttcccattgattattaagatcgctttgcatggtttc
agcttgcatggtcatttttacggtcccgtactaccgtgcaaagcgaggactgcctg
>MER99   MER99 repetitive element - a consensus.
aartcagaattcctgnaarttctyagraattytccaartcataagttattcttaaamtaytwcygtctca
aaacaaaacaaaaaaattgtaacatycttcmnacnnyttaytcattatyatrgayatctaaaaatytgtt
trnttaawaacraatattnagcttagtaggatttacaaaraaytayagyytataataaatattcaaacac
tgaaaaacashancaaanattattgggtagtattcaaataacattcagatctcctaacaaagttasgrga
caacactacacagagtcanatgtcnaaactgccaatttaaggacttattttgcttccaaaacyyattatt
tcttggaataccactcataggatttgtataaagtatacnatrcatataaacntattaatatttattttat
ttgcaagaatgattcaccattagcagyakacarggccatgaacacatasttanaatggcaacagctacaa
gcaaggctgactgattaattraatngtgccacttctctcttacgtgytcctgtcctggtttctrgaaata
ccraccttaaccttcaactccatgtgcymanrtttyctgctcytgctttcaacttgntgtcactggattc
cttcaaatcagtaatgtctctatgttgattgttaagttttaatttttcagagaataanattttttcttat
tttcccratttttyaactgatttttcttgggattcagragaaaaatttcttaagaaatgccaggaaggaa
ttcccacttggaaacac
>RICKSHA   RICKSHA repetitive element - a consensus.
gggtttggatcataatcccgaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatcctaaagtctaaatccctaaagtctaaaatccctaatgtctaaaatcccgaaaatcacaatca
cgaaagattaaaatctcaaatattgaaatcctgaaagccgaattctggggaagggattagtgcgttttcg
gttgtacgcaggatagttgcatcatgttagttgcatcatgttaggtggcagaactattaccttgttattg
tctttatttggaaattaagtatggtttaaggagacacgtatgggtgccaagttgacaaggagtggacttg
tggacttaattttaggtgtcaacttgactggattaaggaatacctagaaacctggtaaagcattattttg
ggtgtgtctgtgagggtgtttccagaggagattagtgtgtgagtctgagcggactaggcggggaagatct
gccctcaatgttggcgagcaccatccaatcggccgggggcccggagagaacaaatacagaaggcgaactg
gtctctctctgagagctgggacagatttttcttctgctgccttggacatcagaactctgggcttgctggc
tttggactccaggacttacaccagtcctnnnaaccgggtcctgaggctttcggacctcagactgagagtt
acaccattggcttccctggttctgaggcttttggacttggactgagccatactgccggcatcccagggtc
tccagcttgcagacggcctgtcgtgggacttctcagccaccataatcgcgttagccaattcttctaataa
attccctctcatrtatatatatatcatattggttctgtctctctggagaaccctgattaatacagatttg
gtattggggaagccgaatatcattccttcttactgtattccttacaacataatagaagagatctgtgaaa
ttgttccctcacaaaaaggctgtgataaaataagtggacgaggctactcaattgtgaaagataaaattta
aaagctaattattattggtgctgcaaaagcagaaaatcacttaattacaatggccgagcaataaccagct
tttaaatggacagcatatacttacaaaatttgtagaccacaaccactctgcaaatacacatgcagcaagt
gtcttgaagatggcaamartgaaaattcagtttaaaaatacawsaattscctgccaaattattcaatctg
tatgacttctacttctttacacaaaatttatgctatgtatttcatcttcgcatcatttccaatactggag
gtataaattgtgtagagacttttagagagttctaatttgttttatgcattttttgcaaatttgactccac
gaaagtgcattatcacaatgttgactttgtgtgtaagcattgtgcatgtatgtaaaaacgttgaaacttc
ctcaataaatgaagagatgtcctttttgtacatctgcatttgtgaaagataaaatttctcaagatcttgg
ctctttgggcgactgcatatgcggtggtgacccatcgcggtttttgatcgatctcgtcaaaagacttagg
ttgttcgtcacggtatttcagatgaccgcagttataaagctgggtgcacacaattaccaaccatagtgat
atgcgtttatacatttccctttttgacctatttctttatgaatacggttcgtctgctcataactgttata
cccgtgcgactgtcattagtatacctgagtgtttatgcttgcaaaaatatgtatgttattattgcctatt
ttattgtgtaaagtggcctatgaagtgttctgtcatgtttttatatgtttctcaaataaatcccctttta
aaaatgtaaataaattatcttttaaagaatttttaaattttttttcagaattatattttcgggattttga
tctttcgggatttcaacattcgggattatggcgtttgggattgtgtctttcgggattatgatccaaaccc

>L1M3E_5   L1M3/4 LINE1 repetitive element 5' end - a consensus.
gagtgatgtnaccaaaggtagaatagaagcaagctggcttcactccccccacccacagaaaaccaaaaac
aaatatacagcaccaagattatcaccagcaatatcccagaactcaaatatgaggatgagacagttcctga
ggccacagagaagtaaaaaactctgagcagayagtaagagaattagacttcnatatcnacratgcccctc
ccccaatctgcccagcaccacatanaaaanttctcccagactcanagtttctacaytggaaaaagtgaga
ttraggtggacaaccagcttccccaccatcttgggttccttggcaggagacctgtccctgcctcaaccca
trggaagcatcaygagtgcctgaagggagaaatatycctgaggacagccagagacaaagggaggaggtag
gactaccatccccagccctggaaactcggggggctgctctgtaacttggmcaaaggagacaccaaatcag
agtggctgttcagcagcaccatgctgtaggaggttcnttccacaggtcccctggrcatgaacccctagcc
agccttcccacactgccaggatatcccctttgggacctcccccaatccgggatgggnagcactctgagag
ccaaggcaaacctrggcttaaggtgccatctagtgcygaaaggaggcagngacctagygaaaagaaattc
aacaggtaaattacaaagaatctctaagcaaacaaaacaaaccagmcaga
>MER96B   Primate MER96B repetitive element - a consensus.
aggancagggtgagrcaagtgaggcactcgccttgggtacaaaatttaagggggtgccaaaaaactcagt
aatcaagataaataatattttaatgcaatattttttttaaaatcaaaattaatgaaaaaatccatgacaa
aatgtcaaaatkttaaataaagatatkatcagtatgactgatntttcattttgcctcaggctccagtatg
agtngacactgcacagttrctgatcctgtatttaaaattttgatattttgttcatcatggatttttttgc
attnattttgatttttnaaantattacattaaatactatgtanctwtwtwatryattcagatattattta
tcttgattnctgartgttttggtacctycttaaattttgcgccygaggnragtgcctcnctcgcctcacc
ctagttctggntct
>MLT1K   (MLT1k subfamily) - a consensus.
tgtggttctrgtggggctgactccaacccctagctccaggggtgggcacatgacccaggcctggccaatc
agagcattccatcccyctggccacagtgattggttcagggatgggcatgtgacccaagctgggccaatga
gagttctcaagccctgggacttttgctggaactattgggaaagagrtgttctttttctcctggggttgct
aagctggtaggatgtaagcctggagctgctggtggtcatcttgccaccacrtggagagagcctgcctgag
aatgaagccaacacagaggaaagcagagccaagagatggagagagacagattcctgatgacatcatttga
gcacctggatccagccatgcctgaagccagatctatgctacccctggacttttcagttacatgagccaat
aaattctcttttttgcttaagcyagtttgagttgggtttcttgtcacttgyaacca
>HERVK3I   sequence of the internal part.
[encoded data, 7313 characters]
tttcaattaattcataaacagaaagggggata
>LTR22A   Long terminal repeat of endogenous retrovirus HERVK22 - a consensus.
tgtgggagatcggtcagagtggtgggaaaaactatagggaaaggacgcaaaccttctgaaaggtcagaag
gttctgcagagccccgggggagaatagctgaaggcagctgttctataaccctgaggcagagggcaaggag
taggtacaagggagtgtaggggaatttatcttaaacaggcttgtttacttatgttgaccaggaactgacc
tttgatcatccgcgcgcgtgacgttccctgaaaggggaacaataaatgttaattacccgcaggttgtgtt
tgctccaggttttcggcattgtgcctgcactgaataaaagcaagcagctccagcttctcggggctgctct
ctggccactagagccaggcagtcacctagctgctcttacgctgcatacctgtgtctgagtactcatttca
tccatcggtcggccagggtctgcgggacagacccggca
>LTR47A   LTR from human endogenous retrovirus.
tgtggaggctaaagcaactccatcttggatgctaatccaccatgttgacttctgattaaccccagttccg
ggaatgcctctaagatttccagtttatctattgttccttgtgtaagagcaggtacttactgtaaatcctg
cccttaggtcaaaacaaccttgatgttatcatacttaccataaatcctgcccttagcaattgtcctacac
attccttctgaagcacgtataccctttccctgtggtatataagccctgggtctggggggtaacggcgcgg
ggatccaccatcttgtctcgccgccgcccaagacacagacgtggcttctgtttgtaagtccctattaaat
gtttctttctgagaaactggatttgtcagcctctttcttcggcctctcagcttccttggacttttggggg
taggtttgcatagacctgctcaccgcggaaca
>LTR47B   LTR from human endogenous retrovirus.
tgtggaggctaaagtaactccatcttggaagctaatccgccatgttgacttctgattaaccccggttcca
ggaatgcctctaagatttccactttatctattgttccttgtgtaagaacatgtacttaccgtaaatcctg
cctttagatcaaatcaaccttgataatctcatacttaccgtaaaccctgcccttagcaaatgtcctacac
attctctctggagcatgtataccctttccctatggtatataatccctgggtctggggggtaacggtgtgg
agatctacctgtcttgcggccacccaagaccacgcttctgtccgtaagttccccaataaatcacccttta
ctgacaaactggatttgtctgcctcgttctttggtttctcggctccttctgcgtttgggggtcattttgc
atatacggccctttcacgaaaca
>MER101   Putative long terminal repeat.
tgtgaacaaatgtgaacctgaaagagccaatccttcaagatggatcccgagtggctaactgggcctaaat
ttaaaatagagccaagcggccatttgctgactagaggtcacacacgtactctgagttccccgaaaaccca
cacctctgtttaactttgggactttcagagctcacctgaaccaaccaatcagagctcacctgcmtcaacc
aatcagggctcagctgtatcaaccaatcagaactcagctgtgtcaaccaatcagaactaagcaagtttga
atccttcatttgcataaacggacctgattgggaacctgggcaggaacttttgctataaaacccaaaccct
ccctttgttctctggaaccgcaccttcgttttacaccgaaggctgcatctccccggtttgcaaactgttc
actggaataaagtctctttcctccaaattccttttcagagaacttttgttcaca
>MER100   Molecular fossils of HAT DNA transposon.
gattccagggtaakcttacaagacataaattcattcactgcatcattcataggcaagctaytrcaacaaa
gatgttgaarccagaggtacamaaaaggctgcatgacgttactaatgttaatgttataaaaacaaanctt
taatatcttgtacagtagaatctatataatactttgtaataaawtgggaartgaccatgaaaatcttttg
taccacacagaagtttgctagttatcttgtggcaaagtacttaattaagagttgtcaaacttaaagatga
gttatattnatttttctttttacaaaaagacaagtgttccaaatttgactgaccttttctgtgatgacaa
gtgactgtcagtagtatgctacctagtagatatttttgaaaaaaataaacgcacttaatctgtcccttca
aggtaaaggtgtcgatattttaacaatgagtgagaaagtaactgcttttgaargaaatgcacaatatgga
gagancattttgaaaatagatgtttggaaatgtttccattgttatatgattttgtngccgaaaatgatgt
aagtgtgatacctataaaaactctcatatctgcacactttaaaacttggaaacagaaatttctaacctgc
tttttaaaaatcttccaaatgaagagttttaagtgggttttgaacacatttgttaaaaatattaaaatgc
aacatcttccgattagtttgcaagaacaactgattgacatcagggaaaatggaaatttactagccaaatt
tcaacaaaaacctttgcataattggtagatgggattgaaaaatgagtatcatgatttagtaagcacagcc
aatgatatayttcttccatttggatctacatatctttgtgaggtatctttttcagctatgacagccatta
aaaccaagtattgaaataaagtaaaaaccagaccttcaaatcactgtatcaaagtgttaaaccaagattt
catattatyctagcatttaaataatgtyagatttttaaaaaaaagcatattcaatcatattctctcatta
aaaaatwaataataaaattttaatgaatatataaaargttttatatacaattataaaatwtaaattattt
taaawtatatttyatctttatctcatccttttaaaatttsttttntgtatatgctttataatatgcatan
taagagtagtacatgcatataatttawaaattaaaatacayatgttknaantayatgttcaaaatatttt
tatt
>LTR48   Long terminal repeat of endogenous retrovirus - a consensus.
tgttggggctcagaaaataccccaaagtatggtgctttggcatgctgagtactttgaactaaaggaaatt
ggaaggccttagaagcagccntcagaaccaaggtctntctctgaccttctcttgcctccctgtctctctg
cccctctttctttccccaagcacagggagggnctctctctgaaatttccttatctgactaaggaaacttc
tttccaaaagaaatgcaattgtcttgaatccccntccctaggaatctcatcaaataaccaggaaagatta
accacatgagaagagaagagactaaaagtcatcaaacccasaacaccacacccagacagacttttcatca
tctattcttctgagggcagctctaagagattacctgagagactttttatctgcataataagacaaccttt
gttcacagtgcagttctgcccctcaccttcctataatttgttctccaccacctccnccagagcccagaga
aactttgtcccaggccattggtctgttctttgggcccattcatttcccctaaaaatcatttactacccct
ctaaaattgcctacatcccccccatttccctctcccctatgaagagggtatttaagcttcaaccatctgg
cccttctttgagtctcatatanattttgtatgactcccatgttcatatgcatgttaataaatttgtatgc
cttttctcctgttaatctgtctattgtcagttcatttcagcaaaccttcagaggggacagaggggaagct
ttcctttcncccctaca
>LTR48B   Long terminal repeat of endogenous retrovirus - a consensus.
tggggctcagaaaataataccccaaaatatggcactttgacatgctgaactgaagaagcagcctcaaggt
ctctctgacctcccccccccctcccnnctcccgtctctcaatcctctgtctctcccaaagcacaggatga
agctgttctctgaagttcccttatctacctagaaactggacctgccaaagaagaacacaattgccttcaa
tcccttccctgaaatttcattaactagagaagattaaaactcatatcacaganaaaaaaagactgaaaat
taaacaccacacctagagcccagacaaactttgtcacaaaccattgtctgttctctggtcccattcaatt
tccaaagagaattatttacaagcyattgtctgttctctgggcccattcatttcccccctaaaaatcattt
actacccctcaaaaaattggcctacaawtttgcctacatttcccccatctccccttcccctatgaagaag
ggtatataagcatctgtaccccattgggttattgggtaatcattctcctctgtgattcccccatgctatg
cacgttaaaataaatttgtatgcccttttctcctattaatctgccttttgtcagttgattttcagtgaac
cttcagagggcaaaggggaagttttcccttggcccctacaagggca
>LTR49   Long terminal repeat of endogenous retroelement - a consensus. 
tgaaggaaatcaaaatatttyaccccaaaatatayttctttgacatattttgagatggctrttcagaggg
cctgcaaacagaagtagccctgcaaagctgtcttttgtgggggagatttgcatctgtagagaaaatctgc
attgatgcagccaggctttctctgaggccctcccttgtctggatctaggaaagattaactgagagtctga
cacctttaaaggtctgaaagaaacatttaccatctattctctctgagggctgctacctgtgaggtttcat
ctacataacaagaccacctttgctagccaggcctcctcttctctccctcccataacctgtcttgccacta
taacctgatttaccaccataacctgttttgggccatgctccgagcccccattctttctgtaacctcaaga
tggtatataagcttctgtaccccattggggggagttttgggtattcactstgattctcccgtgtrtrcac
gttaataaatttgtatgccttttctcctattaatctgccttttgtcagttgatttttcagcgaaccttca
gagggcgaaggggaagttttcccttggcccctaca
>LTR8A   related to the MER4I-group.
tgaaactgcctttgcaaaaattataacagtgagaaaattatgacagtgaaagagatctgatctaaccaac
ccccatcttgcctttaacctccaaactgcccttaatyattcctgggcttgggccaagctaactttgggag
acatttagtttatagtttaaatgataatagcccttccccaaaactmaaccgcctttgtaaagctaatgaa
agaccaccaggytaggaggatgagaggagcctgaattctgctaaggtgtagacataaacgattaccagcc
attattccagaggtcacaagatttgcaacttccccaattactcctgcagataacatcactattgtagaac
ctaagattggccttttgagatatcttttcaggtttttttgcatttctgacaccaatggctccacctggac
ccgccaaccactcctgtggccccacccagaagtgactcagcacgcacgaggaccattttccacaccccta
tgattgcatccccaaccaatcagcagcaagcacccattgcctagccacccccaccccctgccyaccaaac
tatctttgaaaaaccctagcctctaaattttcagggagattgatttgagtaataattctgtctcccacat
ggcgtggccagccttacgtcaattaaactctttctttattgcaatgccatggtctttgtctgtgcagcgg
gcaggaagaacccatcgggcggttaca
>MER102   Interspersed repeat MER102 - a consensus.
gggttgcaaactcaaatgcctacaggggccaggcaggtaacataaatgagtgaagtgggccaggtgggga
ctgtggcaaactggagagcacatgccctgtctaaagggggcagcagctgctactcagctccagccaattg
ttgccatgtgggaatgtaggcccagtgttgccagatcttctgatttttcaagagaagccagaaatctaga
tttttatgtgaaatctcctgatttttaaatgttggcaactaatttaaaatttttawaaaacactgtgtag
gccaaacaaaacatatctgtgggccagatttagcccatrggctgccagtttg
>MER41E   internal sequence belongs to the MER4I group; subfamily MER41E.
tgaaatagctgcataagctatgggccgataagaccctgaaaaaccagggtgtggaccaagctggctaaga
ctgactggacccaacatggtgctggatttgacctaggtttcacctaggacctcattatatgctcattaac
atactaaatcacacacccaccagcaccatgacagttccgggaacacccatatttggtgtaaaaatgggtg
gcaccacagttctgagaaatcttcacctttttccaggaatcttcatgaatattccaccccttggttaaag
aaacccataaaggtagaagccccaaacccymttggcgcaactcwctctcttgagtatgcccgcactcccc
tttcttgagtgtgtacttttcgctttgcaataaatctccgtactttcactattttctgactcatccttga
attccttctcgcgatggtgtcaagagcctggacaccggctggggtcgasgtcccaccggcgtttggggac
ctcccccagcccaccggtatca
>MLT2E   Interspersed repeat MLT2E - a consensus.
tgctggattgttctgttgtcaacttngttaagctnggaactatgtttcccagaatccccttccctgtatg
gttctgggttagagttggccaaagatgaaattgtggaagatttggaaggcagaagtgaagcagcagccat
tacactctgaaggtcatcattggttasaggcagtgagagatggccagatgcagaggtgcccaggaggttc
cagcttgtcctcactctcccctgctcyatatccagctcttcttcctgaccactggccctgctgaccaaca
gcarccccaggcccaccaccagatgcttggctgcaaactcacagaggtagtngccacacagagncaacaa
ctttccatagagttctccaccagctccccttcatggtcncacttyagcggctggatatgcttagcttcaa
atttccccacaagctccagnctcattcaactncgccagagctggttagtgaccctttttctgatccttca
actcccccctccagaccttcacttccccagctcctcccacaattgtataaggtctaattcctataataaa
tcccttattccatanatactacatagtggctctgcttccctgactganacctgactaataca
>LTR50   Putative long terminal repeat of an endogenous virus - a consensus.
tgtgccagttattaagctattgtctctcagctccaaacccacccttctatactctgctctgtgatgctgg
ggctgggactcgactctgcaaaccacatttctgctttgccagctggctctccctgttaggctctgccaat
agggggcgctagagggagactgcaaggggctggaggggaggaagaagggacttgctccttcctgtctgct
gctgtttcctgtctgcttcctgttcctgtcagcatcaccccagcaatgcttcttcaccctggcagcagtt
gcttccagttgattccagcagcagcagttgattccagtttgcrsagttccagtttccaacantttytccc
aacactcccagaaccagcctcattgtaccccctcctcctcctcagagacaccagcaccagctgggcagtg
ccccctcctcagaggtctgagtcccagctccatggggcccctcctctgagctcagagacaccagcaccag
ctaggcagtgccccctcctcagaggtctgagktcccagctccatggggcccctcctctaagcttctaagt
tttaataattccaacctcttcccttttgttcccccagccctagggggtggtggtagctgcttcctgcagt
tactacctctgtgataccttagtgttctctttttgccttttcagttctctaatamacaactttataccta
gttaacctaagttaacaattctttatattaaattctctctgttaaaataactggtgtggtttctgtcttc
tcctgactggaccctgactgataca
>LTR51   Putative long terminal repeat of an endogenous virus - a consensus.
tgtgatctgagagaccaaaatagangcccctttatcaactaagacgggccctaaggttaaggaaacaaaa
gttacctacgggtcaagggttcagggcctggctggcatggcaaatttctaaattcctacaagaaaaacca
cactcttgctaaactccctaacacaataggagctatcaggcaaattatcananccctcctaactctgatt
tacaacccagaccactacaactctgattggacagaggactggccttacaaacattcttttctgataagaa
actgcagaccataagccagttttggccagtttanagaggctgcacacaaactgtctttgtgtcctatagt
tcaccttttgacgtaaagagccaaattntacttcattttaatgctaaaactccaccccaaagtgaacatg
ggatgtatgttacatatatgtttacccattgcacatgtgctcggctcccctcataaatatttatagcttt
tcccccaaacctgctgaatatgtatgtctccattgtgtaataccaaccctgtgaggcataaaacccaacc
tgccctttccctctttgaagagagagcgcctttggtctatgccagagactatctcttcccagtttgcaaa
ctgatattrccaataaagctctcctttctactatttagcca
>MER103   MER103 repetitive element - a consensus.
agttccatggtcaaataagtttgggaaatgctgggttaaacaaagttaaacaggtttctttactgcagga
cttctcagagcctttaatatgctaatgtgcattgtgaatctccaagaggggaaatatagtatgcagtrtt
tcccaaatttatttgaccatggaact
>MER104   Non-autonomous DNA transposon - a consensus.
taccatatttcattgaatctaagatgccatcaattgtaagatgcaccattattttatgtaccactaagaa
agaaaaaaatgctgccaattaaactataacatgccattaattgtaagatgcatcccaatttcagagatgt
taaaatgtgaaaaaatgtgcatcttagaatcgatgaaatatggta
>CHESHIRE_A   Nonautonomous DNA transposon, HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtaaataaagttttat
tggaacacagccacgcccattcgtttatatattgtctatggctgcttttgcgctacaacggcagagttga
gtagttgcgacagagaccgtatggcccgcaaagcctaaaatatttactatctggccctttacagaaaaag
tttgccgacccctg
>CHESHIRE_B   Nonautonomous DNA transposon, HAT superfamily - a consensus.
caggggtcggcaaactatggcccatgggccaaatctggcccaccgcctgtttttgtactgcccgtaaact
aagaatggtttttacatttttaaatggttggaagaaaaatcaaaagaagartattttgtgacatgtgaaa
attatatgaaattcaaatttcagtgtccataaataaagttttattggaacacagccacgcccattcgttt
atatattgtctatggctgcttttgcgctacaacggcagagttgagtagttgcgacagagaccgtatggcc
cgcaaagcctaaaatatttactatctggccctttacagaaaaagtttgccgacccctg
>HUERS-P1   Primate HUERS-P1 repetitive element - a consensus.
aatttgggggctcgtccgggattgcccttgtggctacctgcccgtggtttggtagcccccctctggcgat
ggatccagaggccagcccaagtggccgcctagttctcttggactgggggctgactctggtactatctctc
taccggtggggcgctgccgacccaatgtgcatggatttaattgcaatrgagaaatagtcctggggagaca
tcccataactgtagccctatcacagggtgtctgtctgtagccccattgcagggtgtctgtctgtagcccc
attgcggggtgtctgggttggtgagtattctaggcgctgccaacgnccccttccttctcctgactkgttc
tgtagccccctggtggggtgtctgttggtagccycacggggtgtctgtctgtagccccatcatggggtgt
ctgtctcagtttagctcctatggggtctcwgttggctctccctaactagtaggaagagtctgtggttrgg
gagacttctcctcaatcaggaagatttcagggagatttctcagacggagaataggagaatagtttggaag
ggatactcttggatttgagacttggtctgggatctgtgttttgaaggccttctgttcgtcttatctttgt
gtgtgtttgtatatgtggaggggatctctgaaggaattgctgatggaagtccagcaggcctaactcagag
aaccctccttatttgtctggtcacatttggtgagccctaaagaaagctcaacaggcctgtctyggggtga
ctatctgctcttcgccttgcccagagaccccactgtgaattaccatttggaggtcatccctccccacctg
ga
>LTR45B   Putative LTR from retroposon related to the MER4I-group.
tgtgtaaccacaccagaccaatctggttcaacttttatgtaacaaagttgtgagttgtttttcagttgcc
atggacccccaggttgaaggtcatgtaacctgagcatgcccagatgaaccaagygtgcaaccacaggggg
aacctaagtgctcagaccgaggagtggggactgaattaagaagtggacaccacatggcaggatccaggat
ccaatcagattgagccctggcatcaccccatggcaggatccaatcagatcatgcctcccagcatcaccct
cattgcaagatccaatcagatcacacctcattaccctatgcctataaaacctgccccagaccccagctca
gggagacagatttgagcatttcctcctgtctccttgctagtcgacnnacttgcaataaagcttttctttt
ctcaaaagctggtgccatagtattggcttcgcatcaggcagcagnnagcccattgattgcttrgtaaca
>LTR52   Long terminal repeat - a consensus. 
tgtaataaagagtctgactccattttttgatgtttgactgctgacagcttttaagcctcacccctccctc
ttccctttgccccacatctgggcaagctgataagaaagcccaggtgctccctcctttggtactagcagga
aattcaaaccatacaagcccctgcctgcgggaaccctcaccccagccccacccccctaaccacaataaaa
accccaagccagtctcctttccctgctctctcaagacatttttggacctgcttgggaggcctgccctgct
ctccccagaaagcctcaattatgtaagtaataaaccttttcataccctcttggtgtgtgtgtggcatcat
cagtcttaacatccaaaccaaattttgggtgggggagtccatcctgcctctgcagagtgaccayaacaac
a
>MER105   Non-autonomous DNA transposon - a consensus.
cagcctttctcaactagggttctatgagagaattaagccctaatgccctaaggcatccattgtatgtaat
gaattaacttctctcctatgcatcctagaatggtactagttatataccatccttgggagaattgagaaaa
tagtcactcaaatcattttctgtgttctgtggttcagatgaggaaccctggttgagaaaggctg
>LTR53   Long terminal repeat - a consensus. 
tgtggtgtaaggcctaaaattaaggcccaatattatgtgctgccttgacatctggtgaaatcaggagggc
ctcaaatggcctaactacaagttcccctccccactctgctcccatggataaggtcccctagccaaacaac
cctccttatcaaggggaccaggcacagttcctgcttatccctgntgagtagygggtttcagttccctgcc
agcccgtggaattattcaaayaagccaatcacatcctcctgcgggaaccaggggtcacctcaccctcttg
atactacaaagcctgcctcccacagcccctggttgttcactctgttcctgagtgcaacccccatgtggcc
ctgtgtggnatgtggtgtcctcctcccccaggctgtgagtatatgtgattaataaactgctgtcaatctc
atctgtccagtgttgggtgtcatgtgtttarccatccccataaccctagggtgggaatccctccctcacc
aatggggtgaagaggaggcaatwaaaaca
>LTR54   Long terminal repeat - a consensus. 
tgttaaataaaatttataggaggccattgttttggactaagctcctgcactaggccccaacagaacagac
caaaccaaaatggagtcactcatgctaaagttccatgtcaccaagctgaaactaagttgtttatctgacc
ttccaagaaatcaggagagagagagagataacagccaaatccccaaacaggccagttttagccagcatga
taaggaagtcccctctgctttaacctttaacctaatgttaagcaatcagttacttntctattgttctgtn
tccctgtnttaaccttacaaggaaagtaactttgaaatgaccaatctgctttttgttctctgtttctgct
ttcttcagcccttttctgtctataaagccaacctcctctgctcagctcatyggaacactcattctatttt
atagaatgaggtrttgcccaattctagaatcacaaataaaagccaattgagatctttaaactaaatttgt
tgtaattttgtcttttgaca
>MER106   Interspersed repeat - a consensus.
cctatttacattaggccatgcattctcaacaggggcaatattgcccccaagggggtgaaaattggttctt
ggggggagaaaaaatcttagatattacaatggtttgtggccctccaaagggccacagtacataaacagat
atacagtatatctgtggtattaaaatttcatggggaagggggtattaggaaaaaaatgtctaaaaaggct
ccttagggggggaataatgaaaaaaggttgagaaacactggtctagag
>MER107   Non-autonomous DNA transposon - a consensus.
caggggtgtccaagggagagaatacagtcatgggttcttagtttctgtttctggttgggccagtaaagcc
ccttcctcatccctcttttctacttatcactagagacagaaactaaaaaccatggcttcaggctgctaaa
agcctaaaacaaaacaaaacagaacaacaacaaaataaggcgggttggacaagcttg
>MER44B   Nonautonomous DNA transposon.
cagtagtccctccttatccatgggggatatgttccaagacccccagtggatgcctgaaactrtggatagt
acygaacyctatatatactatgttttttccyatacatacttatgataaagtttaatttataaattaggca
cagtaagagattaacaatantaactaataataaaatagaacaattataacaatatactgtaataaaagtt
atgtgaatgtggtctctctctcaaaatatcttattgtactgtactcacccttnttcttcttgtgatgatg
tgagatgataaaatgcctatgtgatgagatgaagtgaggtgaatgatgtaggcattgtgatgtagcgtta
ggctactattgaccttctgatgtctgatgatatgtcagaaggaggatcatctgcttcaggtgatcctgga
tcattgagccatgacaatgtcgatggttggatgtcaggagcagacaatgtcgatgactaatgggtggrta
gcatatacagcntggatacgctggacaaagggatgattcacgtcccaggtrggatggagcaggacagtgt
gagatttcasccatcatgctactcagaacaatacacaatttaaaacttatgaattgtttatttctggaat
tttccatttaatattttcagaccacagttgacyatgggtaactgaaaccacagaaagtnaaaccayrgat
aagggagaactactgtaca
>MER61I   Primate LTR retroviral-like element MER61I - a consensus.
[encoded data, 5254 characters]
ctaatggcagttagatgtacttctttagaggggggaa
>HERVL68   HERVL68 repetitive element - a consensus.
gcactrtntgggannnttnntggaanggaagaagagggaagatggatgacaaaattatgcctgggtvgct
atggagttattcatggtatraaayagcagctragctgctgtctgttatgagaggtaaaagttacctgtgr
aatttgaaaatgatagatccaatcacagagagttggcnysctggatcccytggctgcttttggccwtkct
ggctaaagtnaggaaraarcacancycarrtgatgtctttggtttttgttctytcctccarktgggagga
gaaagggcccaaacattccnaaangtgagcttnntwtgsaswaaagwyawwaacaktwnnttgnagttnt
cttctccaggtggnaggngnaangrtcngaaaantnctnnaggcnngnwttgagtgrrccaaraatgtta
aaagtttgcattgctctctcctccaagtggaagraaaaargttaaatcagttcccagggctggagyaang
ctttagataaaccagaggaggagaaaaagtaaaaaaaaagcccnccaaacaagwaaaccactctagccnt
ttctacagcttagctgctgcyacagcaactcaacnccctcctttcmctacaaccttcanctccagcanct
gtaatgttaaccytgtaaadtgctnaatttactgctaggggtttgantaaacatghaatgagtaaaaaga
aggaaatnattatwgaatsrctttgtattttgtggctattgcatctggatgtatgataaaaattratgta
aaatgttatatgcttgtaatttcataaatgctagaggaatcatcctaatmgggaaagctgcaaagaaaaa
aaagttagtggnawcacaactcccttgctttytgctgcyggtgggtggattggaatttaaactctttgag
tattggaaasagaacaagtctccataactgatgatttttgcctattggarcctctgnaaaaagggagaca
acatnaaaagagaggcaatctccagatggagatacacttttggagttttaaaaanyagtttttagtttgc
taatgwgctcttgytgaaatgagatgtctgacccttagaggctgatgattttcagcctgatgtgcatgat
ttttgagggggtcaatttggactctaaractgacaagataaaaaggmctyttagaaaagccttgcttgtc
acttggacttggaatacagctgtctggntcttcagtntctcagctttgctgctgctgaagaaaagccact
ggcttttttggaatcctgaattcacagatcctaattgcctgtacctgactctaagctgaaacctcatact
gtctgctgtgrgctgtttcagcctcgngntgagctgtgctgaactgaaatnngntgaaatggctcgactc
aatgaacagaactcagactctgggactgttgcagatttaggaccaccctctgtggggccataaactatga
aaacatcacggatgctggctggactgtctgggtcacatacagatgcccacaggaaagggcttgttctctg
atgggaccatctaaaattgagctgctgattggctctatatttctgatacagagactaattgcattcttaa
cttgtgatttctgtcgaaagctgcaagttgggggagggcacattacaagaagtgtgacccctccacccac
tcctgacagattggacttgaccccctctcggggatgtctcactgctattgacttgttgtgttcggctttc
tggattagttgcagtttgcaacaatggactgacagcctgagtctacttccctcacctttctcctggtaca
cacatcttagtgagacagtttgattattaaatgcagctgtccccagaaagggattgatcttttttttcct
aggctgctcaccggataaatgatcaggacgaaaagggtgggaaggttatgtaaactcattttgaaaaatt
ttgaaaattcagaattcatcctgaccaatttctgaacatgatgtgtctttccggttaagttgtataaaaa
tgtttttctataaaaatgtttttgtccctcttgcatacaacccttccagacaaaaggtctgggtgagagt
aagagatgattggagaaatatgaagttaagattgtaagttatgaatattgctgaatgggacacactgatt
ttgtaacaacggagaaaaaagaaaaacctatggaggcacggggtgtgagagagggcattaatgatctttg
tttttcagaactgctcctggaagctttcccctcttcctgaagaaaaattccccatgctgcctttccaagc
tgctgcgagcgctttgaattcaaactgactgctgagcctaagatcacacctgacagcgctgactatgaga
cagcagggggtggccccagctcctgcactttccacgaagaacacctccagatgtcatccacacacatgag
acggatgaactggtgtcatggacaagcaaaactgtttggaactgactgcctttaggcagtccctctgaaa
ccaaggactaaactgaattaattggactagactctttgggagtagtccccgtggtaagaggccacactgg
ggaccctgttaacctgtactgcctgactaatgtatgtcctgcttggggtaccctaacaattgtaaactct
ttgtttccaggggtaccacgtgtgccctctgggattgtacttttatgtgtaccctgactatcatgacact
gcctcagccctggaaggctttcaggtcagcttcaacttactggccagagttgtgctgtgcctgaattgat
gcctcaggccaraaaaaaaaaggttaatacagaaacttaaggaggaagccacctggctttctaagataga
cctttatggttaatgggatttgttttaactggctaaattcaggacccctaaagggcataaactgagatca
atactgcaggttggtctcaccctgctgcgtggggtcctactgataataattttgctgtaaagatgccttg
gccaagggggtggactgtgcagaagag
>MER83B   Long terminal repeat of endogenous retrovirus.
tgtggagtcctgataagtaagcaacaatgaggaaggggccccaggtgggggagggccccaggtggggaag
aacaatgaacaattgttctgagagacggctaatcacaaacaacccgcgggcacaacgacctcgttccgca
tgtagccccagcagcatgacctcattctgcacgtagccccctccagcacgaccctataaaacttccctcc
agcccctgcctctttgcagacagccccttctctgctgtgctgcccgttgcaaccttgcaacgtattttca
tactttctctaataaatctgcctttctttacctacaactgtcttggtaaattcctttaccgcctgcgaca
ctggccccagatagttgcacccgtgaca
>MER83C   Long terminal repeat of endogenous retrovirus.
tgtggagtcctgataagataagtaagcaacaatgaggaaggggccccaggtgggggagaacaattgttct
gagagacggctaatcacagacaacccgctggcacaacatcctgttcccaaatacctcgctccgcatgtag
ccccagcagcacgacctcattctgcacgtagccccctccagtacaaccctataaaacttccctccagccc
ctgcctctttgcagacagccccttctctgctgtgctgcccattgcacccttgcaacgtatctttgtactt
tctctaataaatctgcctttctttacctatgactgtcttggtaaattcttttactgtccgcgatgccggc
cccagccagtcgcacccgcgaca
>MLT1L   (MLT1L subfamily) - a consensus.
tgaatcttgattggtctaagccaatcatggtaaatcctattccccttgccagtgattggtttaggaatgg
gcatgtgacacaattctggccaatgagacatgaggggaagtctgctgggngggcttctggaaaagntttt
cttttttaattaaaaaatntaaagagaaaacatgtcctcttttcttgctcttgntttggatgttgttttg
tgaggatgtgatgcttggagctgtggcagccatcttgcaaccatgaggcgacaagcctgagangraaagc
caacacactgaggatggcagagcagaaagataaaaagaacctgggtccttgatgatatygttgagctgct
gaatca
>MLT2F   Long terminal repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttggctaggctggaactacatttcccagaattcccttccctgtat
rkttccaggttagggtgggccacaagagacattctgtgtgagatttggaaggcggaagtgaagcagcagc
cattttgttttctgtgctcggagaggtcagagtcagcaggcgctgttgcagctcacacacgttgtcgctk
atctgctggctcacctcgttggcgtggggcagcagccgggcccgcagctgctccascttcccctggatcc
tccttcagcttctccgactcctgggccaggtgtgtgtktagctccgtgacgaagggcgccagcttctcct
gcaggacacccacatcatcgaggtcggaggcagtgagagactgacatgggttccagtttgtcctcgtggg
ttccagctcatgcttgtgggttccagcttgtccttgctctcccccactttatatccatcttcccttcctg
actgcctgccctgtggacttcaagctccagcatcagacgcaragacaacagccttacagagactgcttaa
ccagctcccacaattgcgtaaggtcaaatccctataataaatctcttattatatatatctcctagtggtt
ctgcttctctgattgaaccctgactgataca
>LTR34B   MER4I-group; a consensus sequence.
tgtgggagaccagaatatgccaccccaaaatatgcctctttggcataaggaytgttgagctgaaggcaat
taagaagaagcagatgcaggaaagctctctgccctccctctatttgcctaaaagcaggacatagatttac
aaagacaaaaggtatcctgcccccaccccttctaccagggagaacaaaggttaaccactgaagacaactt
tagacccttattggcctggagatggtaccagaggaatctacattaacaagccttactaactagcctttat
ctgccagttatttgccttcccacaagttgctgcccctagagactcaaagtccttttcctttgtcttgtca
cttctctaaaaatttnttttactgttctttgttgaagatgctatataagctggaattcaaagccacctct
ttgagaactactcattctctgggtgtctcccatgtatatatgaaatatacatgttnaaaaataaanttaa
taaacttctgtctgtttttctcttgttaatctgtcttttgttacaggggtctattccaactaagaactta
tgagggttgaggagaaaaaattatttttcttcccctaca
>LTR55   Putative long terminal repeat - a consensus. 
tgttatataaatgagccaaagatggcctctgtgtattggcccctaggttgtttatttcttcactgcaggc
tgagacctgttagctcaaaagcccaccggcaccaaactcaaatttttacacatccawattgttttaaaaa
tagcccaaacaagcagatttttagccatttagagcctgcctgctttgcataccccgcgaaacytcaccca
acatctgctagccattgcacttataagrccccaargcgctgctgcyctttggagctctctgacccagaga
ctcccyaaccgtgctgctgagaaacatcacttagacacataagccccctctccgattcccctctcccccg
ggagttcccttgccctcctccccttctggatggtggtcccastccctaaacctctrgacagtctcwtgct
gtgaggagcttccccttcatgcaaccctgtccaagtgccacccaataaagtttgttgtgtggtactgccc
ctgcgtggtcatatctttttccttgatcagcccccaaatcccttraacccccttcaca
>LTR56   Long terminal repeat of endogenous retrovirus - a consensus.
tgagaattaagaaaagaacttttatctgaggaatgcaagtcttttaaattatcaggcccagagagacatt
aaaatgagaccgcaatcacgtcctactccccactttgagctatgtatttcatctcttgaaactgcttgct
attgccacaagtagctataaattaacctaataatgccacaccrgacactataacccacaccctatagctt
aacaatgtatatggccaatcactaatcaatgttatttctgtaaaccaatgagaattyctgacaaacaact
ttgtatcagcccactccctgtccccctcttttttgcctttaaaaatccacttgtaactgctgctaattgg
agtgtatattcagggcaacttgaatctatgctcctgggttgcaatcctcaagctttggctcaaataaact
ctctacttatattaattttgcctca
>LTR57   LTR from human endogenous retrovirus - a consensus.
tgtagtgtgacaggtcccccaaccaggttacttaagggtgtatgtccgctgcctgaaccctgaaggccag
gtggtgagccaaggccatggtgcccagctgaggagcaggtgtccctgagaacccaaacatcccrgagagt
atctgagaacctaccaaggaaaacagtcccattacacacacacagtaggcaaagagccagaaaattagct
taaaagcagcttagagatgggaggtggcacggatctctagagctgtcctgctgccatccaggagtgccct
gtatgtaagtcctaataaactcatctacttatcaagctggacttgtccgagtcattctttggtctctcrg
ctccttcccagtttggggggaggtatttttttatatacagtcccaggtttttcttgtaaca
>LTR58   MER4I-group; a consensus sequence.
tgagacagtatagggaagagactcagtcctggcagacaagagacatggtaaccaagatcccaatgggcct
cacatgtccaggcatattccctcccctaccttcttgcctcccttaacaagctgacccaagtcacgtagca
gaaagggggncctctcctaacttagctgaccaggctgaattcctaaccataaaaggaagaacctaaccat
ttatctccttgagtnatgtcttccaaggttgctgaagcaggactctggcattcctgataagaacctgacc
agatgcagccggctgaagacaagatggactccagcgctgacctttcaccaagtttttcttcattataatc
tcattgtaatactaaaatctccgcccarggtgggrnttatctgccahtttctrgacatgcgatgcatgtt
agagcatgacgtctcactgcgcaggcgctaaaaagaccccgcctaaacatgcttgcctacacgtcgctcc
tttttcctgcctcaacttccttaaaatgacaagagccgagcccttttgggagctagcatcaggatccctt
tcctgtacgctgctcccttgcgctgctcgagccgcaagcctattaaaccttgcctgagaaaatcggtttg
gcctggtgttaatttctacttacatgagagccaaggaacttggggtcca
>LTR59   MER4I-group; a consensus sequence.
tgagaaataaaaataaaattctaagcccccaactgactgaacagaccccctcttggccgagggaacccca
gagaaaccttggaagctgarttcacggccataacaggatgggagatcagacacgcctcattataycccct
ccctcgctaactaccattaggttttcttccctaagggctaaacagaaaccagccctttcaaaagtctcca
cactgataatgtccattactagcttatcttcccaggtacagaacaaagacaagatgagattaatcattcc
ttcacccctccccgagacatctgcttantttnttcctctattcccttttycttcaaatgttcaccttatc
ttatgtaaaatgtagatttactgggcactaactaaagtctcacaagtatgtaatcattcgtctcactgcc
acccccttttttaaggaaaatgtgtaaatactaaacctcctgagaacctctttggaaaaaacagccacag
atgcttctgtgacttacatttttcctrgrtgtgccctcaagctggctcagtaaacctcgatgntttgaga
cttatacctcaatcactcattttggttatcacyctca
>MER4BI   MER4BI LTR-retrotransposon - a consensus.
tttnncactnggaatttgggttnctanragtnaaaatantannagantaaaatgttttnnntnnagttta
taangayatgaggatgtgktttttgttgaaaaaaatgtatttttgtctnagntagaagttatttaaaagt
tgtttcaaaataaagggaaaaaattatataaataaaaataaatgrataaagagaaaaataaaaaggtggg
aaatgagaaacctttgactcctgggtggccahgtggtcacccatagtatagagctgcagctgdgctgtgt
tcagttactaaaggtaaaagttaccagtgaaatttagagatggatcatactcccagggagttggttcact
ggatgcataaggaaatgcaaactaataagncaaaaagcaaatatgcaatctcttggctattgttatctnt
aatagctaaaaaaaaaataaaagagtgctgggttgggtcttgatgctggaccaagctcagatgtvggtct
gtctnagctcaggccactagcctcaaagctacccacaaaaagaaaaattaagccaggacaacaaaaggta
cctctgagacctgtggttaccaagaagatagtcaatrtgggggaagggcaaaaccaagtaactattaaaa
ccagagggtataatgtaaaggaattgttccattttgtagattggtatcatcagcttcctgaaaaaccttt
actaaaatggattgtgagaataactaatttarggacagtatctttrrttttaaatgctgcagaatrgaag
agcatgtttgggttgatgcaggaccctacagctcactattgaacaatcactgatgrgtatatgtgatcca
aacacacaggaggttattcctgagagaacagccagcctagtggactggataaaagccactgtaaggtctg
tttaccctgagaaggggactgcccaactctccctataaaatgccaagtgagagcaccccagatgaagcag
ctgatatgcttcatatgcaagccatgtgggactggctttatgatgaccgggatattcacccactgaatat
gcctattacccaggtcatggtaaatgctggggttaagggggccccttttacatgggcaccccatgtaaca
ttactcctgcagaatcaaacaactgtttaagaagccttatcaaatttgctgtccctcatgggtcttacag
atgcttaataaaacattagawtaattaacaacaaaagaaaatggaaaaggaaaagggagtcaaaggactc
accccagaagsgtggtggaaatctttaaatggttattaagaaatggaataaattaaaattgatggggtta
aaacaaaggtctttacaacactatcaaaggttgggtggaccaaagggagcccctgctggtcccccaacat
taaagggccccaaactagttttctgtatttrctccagattggagaaatttaaaaaaaatcanaaggcaaa
gattataatgagaaagctgacattgcctggrgcaatgctgaggcaaatyaagataaagattgacaaaagg
gcctgagtcccttggctcaacyccctgctgggaacccaaatcctttttcaccagaaaaggtaaaatggtc
tgggagtagaraagaaaggttcctgggaccagaacataaaaatgtaaaggttgatataatgaaadatata
cmnttntnaaagsttgaattataaaatttgaaatgtttaaacakyggctttatgtaaagtagttgtaact
cctttacctaaatgtcttatgaaaatggntantgtatctaactgggggatgtttcccctatctagtacta
taaaacagaaggcatgtaaatctgccctttaagaaatgttaattggacatgctaaatgggaacyagtaag
attgcctaagcccacagaatatagggtagaagctggagtgctagtmgggacaaatcctccacttcatagc
cctttgtggagcatttacyggggcttatggcaaaagcctgtgagtacttcccaatgacaacgactgagac
tttggactagagaatttccacttgaggggcatttactgccttgctatgggatgttaactgaagctacccc
tatgctaatgaaaataatggtgcccaaaagagttccatgataaaataaaaatggtttatataggatcttg
ctacctgggaatgyaaggaggagatactcatgagcagagagcctcttttcccctaggactaactctaact
gtgtgaggagctgctagattctacagtgcctaataaacagctctcatytgacaagagctgcttggtttgt
gaatggcagttccaaggtaaacaaacaacatcttgtttggaaggctgctgctctggttaaagaagagtca
agaaaatctttttcttttaagttatttatagtttagagcaattgggtaaagtatgtttttgtaagcaaat
ttac
>MER50I   Primate MER50I repetitive element - a consensus.
tactttggtgccacgtgacttggatacgttccctagtggtaagagacctctatgcctcaccttctttggc
tggaggcgttcaacccccgtacgcggttttcttctcccctttcactctcctgcttactaaccaaccccca
gaacgattcctctcagccacagtggctctgctccccctggctgatctctcagctcaccctgacgggtggc
tcgcaggggtgggaaggaccttggagtccacaccgagtagacctgagacactaatggccctcctggacag
gaggctcatgagagtggtagggctaaagcctaagaccgtgcaatgtctggggtttcctctgctttttcaa
ctaaaattggctctttcccaaaaacccacaccgcctattctcctgttttctctgtgtgtgttctgaaatg
gccttgcgcacccgccggactgtccacctcgggggcaagtctgccttttctctgctttcactttgcatgc
cacgcgacttccttctctgccttaaacacacactccctgtttgttatttgtgcacccgcggctcttgctg
catttgcatggcagcaaagacacgggctcccttgtggatattccctgagatttatacttgtttttaccct
accagctcagatgacctccaacccttcctctgtctgttggctcattgccaggacagacactaatcggaac
cccggctctgccagcttcttatgacttaccatatacttttcattcctgttatgccccagggccaagtttt
ccggtggcttttgaagcagtttgtccgcctgcataggacctcactctgtggccctttaaggacctcacct
acttgctttttttgagttagcactcctttgggaggagggaaaattcttcctttgccatttgcgagctctt
atcccaagccccaagtcctccagaggttcctcctttatgtcaagagggcaaataaacgttgccctctcga
atccaagggctgctgtttttgcgagcatatgaaggctttccatgagtattcctcttgcttcctcccactt
cctcctgtagcagagggattgtcctgtctgcttaagcatttgttctgcatgttaccccaggaggacaagg
aaccccaaatacaaaattttctccattcctctaatcacttccatgcccttctcaatatgcatcaagacct
tcaaggtcatattcgaagggagggaagtccagccccttgcggcagttagctgaaaaacaggcttctcatc
tacttaaagaacatgggaaatggaatatgagaaaaaaagagataatcattttgttgctagaatgctccaa
gtgagagtcactataaggtcatggagacaaggatataggctggcccaaggccgcaggcacaagagacaaa
gtacc
>LOR1I   Primate LOR1I repetitive element - a consensus.
gattttggttccctgaccgggaacgcattgctcgtggctcggctgctgtgggccgggagtttcagaagcc
ctcctaagcagctgcccatcccatttttggccggaggtgagtttctgtttctctttggccccgccgctgc
cagccccaacagtgttcctgattgcctaggaagaacagtctttgaaatttgacatctgcgtctagatgga
tgagtgtcttttgtgggtaccagacagcgggatctgctcctctcaatttgggaaattctgaaggaatttc
cgtttgcaggttgaacaagcccaaccgactgagagaggaagcaccccgactgtttcagtttggacactct
tggggcttgtttgttgctgcagcagttggattgcgttttggtgattgtgtgcgtgtgtgtgtgtgtgtgt
gtcaatatagtcacgggaaattagaatttgataaacggatattcttttataatactgtttggccccacta
t
>LTR26E   LTR from human endogenous retrovirus-like sequence.
tgaaaccatcctcacagggctaacaagaattacatgccgggttctgggcagaaatatagttataattaag
cattaatcaggctgcactttggcccacttccttgtaactaaaagtcatgtagcactagatactgaccatt
tgcatccccattgttcctatagataggatttctgaccttagaatcataggtttttgtttaagaattgatt
tgcatccccattgttcctatagacaggatctctgaccttagaatcataaggcttttgtttaagaattgct
taagatgtttttcagatcctgaattccagcggaacagctgatgccaaccagtttgaagacccccacagag
gaaccgaatcagcatgagaacgcagtttcttcatctccctgtcccatgacttcaccctgcactcttcgac
caatcaacgatccccacacctcggcccactccaaaccccttaaaatccctagccccaaactcctcgggga
ggcggatttgaggtttcctcctgtctcctcattcggctgccctacgattattaaactctttctctgctgc
aaccctggtgtctcggtgtattgacttgccgcgcatcgggcaacaaacctattacggtcaca
>LTR16A1   Primate LTR16A1 repetitive element - a consensus.
tgtagtagatgctgttggtgccctgcccaggtcccytttmtcgggctagtgcatccattccccagctgct
gtgagtgttggctgctaatggctcacagctgcccccttctctggagaattgccctcagctaataggagtt
gcctcacctgggaggttaccccccaccgggcagcccacagccaatagactgactgatacaggggtacaaa
agcctagcycccttgcctcaaggtgggacaactcactctgtggtgcaattcatgctccagagctccccat
gggatcaggctgaggctagacttcagctgaaaccacatccttgcttagcttcttcccctgccctatcctg
cttccctcactcccttacaagtttctcctgagagcactccctcaataaatcacttgcacaagaatccctg
tctcaggctctgcttctagggaacccaacctaagaca
>LTR24B   Long terminal repeat of endogenous retrovirus - a consensus.
tgtaaantaaaataaaatttcaggaccctctaaatttattatgccaagggggaagttaagccctggagac
tgagtcagtagcatgtttgcaattctgtttcttagattatagattaactctcttcctcattgttcttgtt
ctgtaaatgactaggagagaccagagaccagacctcccnccagctyccnttccaatcactgatctttgtt
atagattaactgcctcctttattgtcctgtacctaactcagaccagatggtgcaaaagaccccatgactg
ttacatcttcagtgtggaatgttaaatatacctttcccgaaagaaaaagaccaccttaactaatcagatt
gttgtaactatgcattaagccttatatagaaagatgttgaaattctgttaagcttccctaaactttgtct
atataaatgatcccaaacttctacacttcggaacactgacttccattctttggaatctgtgyttccnggg
tggnccatcntcaaactttgcacttgaataaactctctttaaactagattctgacccttttgattatttt
aggttgacagtgcyta
>LTR16D   Primate LTR16D repetitive element - a consensus.
tgtggtggccatgaaaatgtgcctctcagatctcctgctgcagggagcatagttgactgacggccccagc
tgctgtccyttggratccaccactgcgtttgcaccaaggccacgcttccctcaggctactcccagccagt
gactgagcacggcaggggtgctaatgcaggcccgttcctgsnagatgcgggactcctccgacgggcaact
ttggctcgaggactcctcatcagcctggttgaaactttcttagaactgcactgcagtctgaggctcttcc
tacccaatccttcttccttccccctctcctttcacaggtgtcagacctgcatcatggtccgaagtctctc
ctngcccgctcctgctccctccccttttatctttcacaggntttcccctaataaatctcttgcacattta
accctgtcttggcgtctgcttctcagaggacctgaactaacaca
>LTR60   LTR from human endogenous retroviral-like element - a consensus.
tgttagagtaggcagatagccagacatgagcaggagnggaagcccctgrgaaaaggaaggtctggaaaat
ctcacacccsagagaccacccaaaanatacataytagatatgagcagagangaggggaaatacctatgca
gaaaaaaatgccccttaagatgcccagtaatcattcactctgcagttaaactgtcagaatgttgctagct
acatgctgataagggaagagggcaaaggagaaattcctaagagataygcaggtgcagtaagtacagattt
gaccactatacaaccttcctggggtggcagtaatgagcaatgcmgccattaggtagrattcatatccaac
accgggtccgtgcatgcgcatcaaccaacagtaagggaggvtcccacaagcctgggtaggaactaggtgg
ggaaargcagggacttaaggcagaagcaggaaaactagasaaagaaaaaggtggagacttaagacagagg
tgggaacttcaaraaaaatcygacatcataaaaaccccgtgcagactctcagggctgctgctggctcact
ctctttcagcagcccrctctgcctca
>MLT1E1   LTR from retrotransposable MaLR element - a consensus.
tggtaggcagaattctaagatggcccccaagattcycaccccctggtatcatatrccctgtataatcccc
tccncttgagtgtgggcaggatctgtgaatacgatgggatatcactcctgtgattaggttacattatatg
gcaaaggtgaagggattttgcagatgtaattaaggttcctaatcagttgactttgagttaatcaaaaggg
agattatcctgggtgggcctgacctaatcaggtgagccctttaaargaggytctagaagtcagacatgga
agaagtcagagagattcaaagcagcagagatgctctcctgctggccttgaagaagcaagctgccatgttt
tgtggagagggccatatgncagggantggngagcagcctctaggagcngaagtcctcagtcctacaacca
caaggaaatgaattctgccaacaaccngartgagcttggaagaggatcytgagcctccagatgagaaygc
agccccagctaacaccttgatttcagccttgtgagaccctgagcagaggacccagctaagctgtncccag
attcctgacccatagaaactgtgagataataaatttgtgttgttttaagctgctaagtttgtggtaattt
gttatgcagca
>MLT1J1   Mammalian long terminal repeat MLT1J1.
tggctagctgttcaccaaatctgtttccttttcttcctgggcacacagctagactacatttcccagcctc
ccttgcagcttaggtgtggccatgtgactgagttctagccaatggaatgtaagcagaagtgatgtgtgtc
acttccaggcctggcccataaaacctcccatgccatcttcctctctattctctcttctsctgcatctgct
ggctggatgttaacacccagggtgaccttggaagccatatgttgaagatggcagagcctccatcagcctg
ggtccctgaatgactgtgtggagcagagcaccactcccacccccccatcatcaattggactttacatgag
caagaaataaacttctattgtgttaagccactgagattttgagggtttatttgttacagcagctagtgtt
accttaactaataca
>MLT1J2   Mammalian long terminal repeat MLT1J2.
tgtggcagagactggctaggtgttcaccaaacccatttccttttcctcctgggcacacagctagactaca
tttcccagcctcccttgcagttaggtgtggccatgtgacntgagttctggccaatggaatgtgggcagaa
gtgatgtatrccacttccaggcctggcccataaaaccctccaatayataatcctctctctctctttcttc
mtcbrctggctggatgcagagaatccaaaggactccaaggatggtagagccacaagatggaaggagcctg
ggtccctgagtcactacttggaggagagccactcagcagaaacacccnaccagaaacccacactgaattg
taacatgagtgagaaataaacttttattgtgttaagccactgagatttgggggtttttgttacagca
>LTR1B   LTR from human endogenous retrovirus-like sequence - a consensus.
tgatatggacaggagacagggaaatactgggtagaagagggtggttccccagcaaaggccccaccctcaa
gcctggagacctgcggccctaaatgggaacaggcattcctgttttcacgcccaaaaagttgccttttggc
ccaccacaccccctatcctgtacccatataaaccccaaaccccaggctccagaagcagannagcagacaa
ggagaggagcagangaggagacgagcagaagagcngcagaatagtgcggcagagaagagaaggaacgtct
gaacgccgagaggagttcrgctrgggrcrgtcagagargagntcagccgctggayngccaaactccaggg
gaagatcatcttcccactccatcccctttccagctccccatccatcccactgagagccacctccaccact
caataaaaccccygcattcaccatccttcaagtccatgtgtgacccgattcttctgggatgctagacaag
agcttgggatacagaaagctgtcacactggccctctgcccttgcaaaaaggcagagggtccactgagctg
gttaacacttaagccatctgtggacggcaaagctaaaagagyacactgtaacacatgccnnncccacttg
ggcttcrggagtcacaggcacccacccctagatgctgccatggggccagagcccaaaagcactcacccca
gctcctgcwcctgcccgtctgcatgctccccctcctgtaaggggtttgagcgtgtggcgaccnaacagrn
gagccacacccctgtcrcatgtcctgcragggggrtcagggaactctcccatttca
>MER108   Interspersed repeat - a consensus.
antacacctngcagttnnmncacagtttcactgtaaattttaaacacaaataaaaantccaartggtcac
atagaatgatagaattgaantaactcaagttctgttgtctttntttttacaatcactatgctatngttta
aatacaggaatatgtagtaccacaggggttggagacatgaantnactgtacccgaagtgagcttgaatgr
attctaaactattangaacttactctagaaacaaacatatgtagctgagtccacgtgtgttgggggccaa
ctgtataactggaagttctctnaattaacttccatgtagaatacaatgtttattaaaggataagtaataa
aaatgtgctaatttgaagtttacatatatattattaaaactcaacagtaactgcagcaattkgtttagaa
cttagaccaacaaaagattttttttttwgggaggagtattttatcactgacattgtttagaattgctggt
gcatggtgataataamaaagcagactgacttttagtcagttttattattgttaattctctacagacaatg
cacccccttattgcctgcacctggggcggaccactcccactgccctgcccttggtatgccactggtttcc
tac
>MER109   Interspersed repeat - a consensus.
aaagactagatntttcanatyagaacttaannttgtccactatatacacagcantgttaaataaaatngc
acacacataacaatggttanaatctgaaatatcttctaaatatgaacattttggcctagaacctttcttt
tctcacttccttctctctgccttcaantcagtggacaagtatangcatgtgtaatgctctagagatggtt
taacaaatttatatccaaaagtcatttccagaagacaanccttnctatraantttaacaaaaagtktaca
aaaggtgctaattctactangtnctttgtcatacactggcagcctctttaacatctagagactagatgtt
gcaaaattaggactcatttgtccattatatacacnatatacaaagcaaaacaaaatgcacaanacataca
gaacaagagttcctgaaaatgtgcaattatnaacacactggcacadaaccnttcgcacttccttctctcc
canctcctctaaaccactgaataagcacagacantaatatacngctcaaagagatggtttaacaattcca
ttyccmaaagacagtntttcctrtgaattttanntaaaagtnacttaaagngtgttattttactacctct
acatttaacatacattangcacttcnraacatctagaaagactagatrtttcaaanaagnacttaatttg
tccactatatgtacagtagcattgaataaattgcacacatataacaatggttataatttgaaagtgtctt
ctaaatatgamcattctggcctaaaacccttcccatctccatcaacycagtggacaataatgctcaagtt
ttcagaagacantctttnctatganttttaangcaaaatgtacaaaattattagtttactaactctactt
ttgtcatacactggcaacctctttaacatctagaaagactagatgttgtaaaattaggacttgtttgtcc
tttatatacactatatacacagataagtaaaataaaatgcacagacataagagacaatggttaatcttgc
ctcactgtaaacacantgntggcataganctctttgcacttccttctcctgcctcctcccctgaaccagt
gcacaaacacaatgtgtaytactcaagaggtggtttggccattcccccaaagacaacatttcatatgaat
tttaacaaaaagatatttacaaaatgtattattttactacntctactttnaacatatatcaggcacttca
gaacatctagaaagactagatatttcaaaaaaatacttagcattgtcaacgatatatacagtagtgagga
ataaaatgcacacaaaacaatggttataatatgaaaatgtcttctaartatgaccagtctggnaaagaac
cttcttctcttcattctcacgccttctgctccatgkcctctaacccactgaatgaacgtggtsgtgtntg
ttgctcctggtgtcacttctagagctcgtctaacaatttcgtttcnaaaagtcatttccagaagacattt
rttttctankattttttaaaanaaaaaagggcatttacaagacgtgnnattttctaacttyttwacatat
agaagggctagatatagcaaanattttctwttaaaargttggggggnaagttgagagcagctttttcata
ttatatacncgggccttctataaacggtggccagtaaatcttcccaaagggtggtgggcatytccaatgc
gccaaatgtggcntgttattcyaccatttctctcttccmacatcaaggtctggtagaasgaaggccaacc
gcccgatggccngctaaccdttctacccgtcstygtccgggactcygctcaccttctaggccgtttaagg
cctttgtccrtcattnctggcatngtcaggactaggtamggtctcgdccaactgggacagagcggtcagc
ccgggncccgsrtytgygcrrctccrwggcmtaa
>MLT1E2   LTR from retrotransposable MaLR element - a consensus.
tgccctaatcctggaacctatgaatacgttacatnacatagcaaaagggattttgcagatgtaattaagg
ttactaaccttaaaatagggagattancctggattatctgggtgggcctaatctaatcacatgagccctt
aaaagcagagagttttctccggctgatagcaggaaatgtaaagcagaagaggaagtcagagagatttgaa
gcatgagaagrattcgatgtaccattgctggctttgaagatggagggggccacgatgcaagaaatggaag
aggcctctaggagctgagagtggctcccagctgacagccagcaaggaaatggggacctcagtcctacaac
cacaaggaactgaattctgccaacaacctgaatgagcttggaagtggattcttccccagagcctccagat
aagagcccagcctagctgacacctttgatttcagccttgtgagaccttaagcagagaacccagttaagcc
tacctggacttctgacctacagaactgtgagataataaatgggtgttgttttaagctgctaaatttgtgg
taatttgttacacagcaatagaaaactaataca
>LTR22B   Long terminal repeat of endogenous retrovirus - a consensus.
tgtaggggttcagtcaggctggtgggaaaaatattagagatagttatagaaatagacacaaaccttcttg
gaaggccgggaagtttgcataacttcggtaatagatctggctgaaggcagcctaatccctttacctttag
ttaaataaattagagtagaaacaaaggaatgtagaggagtttatctagmtagcttgtttactcatgtggt
cytaagactaacctttgatctacngcaggtgcttaattgctttctacttgggaagtccacaatgtcaatt
accctctagtggtgttgactcaagcntttgtcaattaatctttactgaataaatgcgagtctcactggct
ggtcggcaactgtttacagcactctcctgggagtctgtaagcggcctggacmctcagctggactggcaaa
gcagaatatctgtgtgtcagtgtactttattcatccgtcactgggtcagggtctgtgggacagactccca
ca
>MLT1G1   (MLT1g1 subfamily) - a consensus.
tgtggcagattgtattttccaaagatggccacaacaatatctcccatcccacatgctcttctttcaatgt
gacctttgccacttcttccatcaagaggtggggtctatgtcccctccccttgaatctgggcagacctttg
tgactgccttgaccaatagaatatggtagaagtgatgctgtgtgacttctgaggctaggtcataaaagtg
ccatgcacttctgccttgctcacttgggacactcactcttggaacccagccaccatgctgtgaggaagcc
caagcagcccatggagagacccgtggagaggatctgaggttcctggtcnacagccccagctgagctccca
gccaacagccagcatcaacttgccagcca
>L1MCC_5   Primate L1MCC_5 LINE1 repetitive element - a consensus.
aggaacttccactttcagttctacttccacttaggatgtagaaagccacaaragaatattgctcccatcc
taacaatragaaaaaaagccagataatctacaaaatyatacttttcttgagcccatcagagagctgaggt
cacaaggcaaccaagtaaactgaattccaaagagtgacaagcccctccaaggagaracaggacacaygaa
ctgtttcacctttggcagagcataggaggaagaggtggccaccataaaagcaggtaagaagaaatcagct
aaaattttaataaattcttaaaggccaagtgtgggctagtgtgwcagtttagaaagctgggagccccaga
cacaagggaagtttgcactcacttgcaagctcttttccatgggcctccaccaggtgctcatgagaaagac
tgggggcagggcaggagactgaagaaagccctcctcagkggcacaggcatgcaggaggtgatcggctgcn
gctgggggacaggaacgaagccnncctcatnttcncagaactttcttyccyaaagcaaaagccttnngct
rctgggntgasaggnagcaaacccnnttnctcccagggcckwrgcaaaracactmtwsyttytysrgaag
mggtargagcyaaaccwtctgattctgggggaagaacagaagcaaaagccttctscycnygngraagggc
agrraacwntntyaggyncaggatnntgcantgatacaaancagaggtcwgctactactgggagaggnac
aggtcccatcccaaccacagatacaaggagagtttgactgccatggagagaggggcaggaacactgagaa
agccccactcctgaggcccaggcgcacagggcctgcctaagactgaggctggaccaggacaacagagaac
atccctnctcccaccacaagcctaacaagcaccaagtaacamagcaacagcagtctaccactgggggagg
gnnannannatggagagagactccctctgtggcacaggtatgcagggactactgaaagctgagggtggag
caggaacactgagaaaaaccctctagcaaaccagcccccacactaagcacaaggtaacagcagcccacca
ctagaggaatttgaagcctgtggtgcactgarggtaaccatagcaacaacaaaacccaaacccagctcaa
ctcctgactagattgactcaacccccacactaaaagcctagcagaagaaaaggcatgcccatttccaggc
ataaatactatttacctcagtctctactgttcttctacacataatgtctrgcattcaataaaaaattaca
agacananaaaaaaagnaaaaaaaaacaacccattgtcaagagacaaagcaatcaacagaaccagactca
gatatgacacagatgttggaattatcagacaaagaatttaaaataactatgattaatatgttaaaggatc
taatggaaaaanggtagacaacatgcaagaacagatgggtaatttcagcagagagatggaaactat
>MER110   Putative long terminal repeat from endogenous retrovirus.
tgaaaactgaaaccaacataatttcctgtccctgdgttaaacaatactgggaccaggcatacttttctgt
tcctatgttaaacaatactgagaccaagcaaaaataacttagctacttgctccaggaaatacytgctcct
ggaagataagactgtgaaccaactaaaatagcttacttatcaagactaacagcttactcatcaaaactcg
tttcaagaccctcgcctcactgtgcccaccaatccaaagctattatgtcataaactctgcccaatcccaa
ccagttccccgccttgcaagacccaccttaaaatcacccagcccaggccctaaaaccctataaataatcc
tnccctaatttttccattttgagacactactaagactctgtatctatgtcaaggtgatgttcttccttac
tgcagtaagtctaataaaaactcagctttgcttgatcaacaggttttnttttctggtggtctttttgggg
agycgacagt
>HERVK11I   It is flanked by MER11 LTRs.
[encoded data, 8023 characters]
ccttcatcgccatggcacatttatataaaaagaaagggagaga
>HERVK14I   flanked by LTR14A and LTR14B - a consensus sequence. 
[encoded data, 6030 characters]
>HERVK13I   Human endogenous retrovirus HERVK13, an internal portion.
[encoded data, 8232 characters]
>HERVK14CI   flanked by LTR14C - a consensus sequence. 
[encoded data, 7523 characters]
>LTR14C   LTR of human endogenous retrovirus HERVK14C - a consensus sequence.
tgtgggaaagagagtttctggggtgccagttgagttggtctcccctgtgtgagacacccatgggaagcca
tgggcggcctctgaggagaaaagtctccttattgccttcatgtctttatgccccgagagcataaccgctc
agcggcattccacaggttgctcagggagataacactcccttgaagcagtggagtataatcaaacatcttg
gctcctcctgaaacccactcccacccgtttcagtcccgataagttaaagatcttaagtagtttagacaca
cgcctttgctcaaggaaattcacagaaaccgccactgctacacatcttatcgaatgactcacgagttctc
cttcactgattaatccttttcctcatcccttcctccccctcccatctgccctaagaacaaagagcttgta
aaccaataaattgggtggagcccaagagctctgggccgtgagcaagcctccgatgctctggtcccctgga
cccgccttttaaacgcttattctgtctctttctaactcctttgtctccgccggactcggggtacccactg
ggtggtgtggggctggtttccccaaca
>LTR61   LTR from human endogenous retrovirus - a consensus.
tgaggcagaaatttaaaaataataataagtactgcattcattcactccaagaaaagtaaaagccaaggcc
cagaatgtggcaaggcaagggttaaaaagaaaaaaaaaargaacaagttttcctctgcctagccaagctc
acttcaaggacagttataagataacgctgtycgaraagccaaggccaaaggaatgggctccagacacccc
cccacctccagagcaaggttgaaggaaaaaaagagaaagacaaattcctttactgttactcctttccctg
gcntcttaagcatgactatgttttacaaatgtctgtatttagccagttcttgtttttctttygacgcagc
tacaaggccaccagctatgcaaggccacaagttatgttatgctatagattatgtgacctgtcactgtatg
attaactgcctttgttttgcttttgtaagcctgcttataaaaaccccrctctgtctttgttcaaggctca
gctttttggatgtgaatccactgagctggtgcgtaccttaaaataaataacaatcctcctgtattcaccc
atattggtctctctagtcctcagtttcccrcaaca
>HERV49I   LTR49 - a consensus sequence.
gtctgaaaatggctgggaacccgagacacataagattttaagcagcacactttttgttctgaatgtgtca
agctctcaggagggtttgtcttaagaagtcccatccataaggggcttttgtcatctcaacccttgttgcc
tggttagtcctgggaaagtccaatcccaggagggcctacccggtgtcacggattaatgggtctgtgactg
gcagccccccacaaatttgtgggttactggaggcaccgtacgcacaaacaccatccttaaccatctgtgg
caacaagagtcttttgctatcttagcctattcctgggagtaaattttttgagaatcattgggattgcctc
ttctatgccctctccaggaacacctcttgcttatatggtaaaagttattctaaacctggaaaattacctt
ttgggctttccatgaagaggcttattggattgagtcgctattggaataagtacaccattgaaaattctaa
ttgtcaatggccaaaagatggatcctttaaattagaaagactcctaaatttaaaaaaaaaaaggatttta
gagatctcttattctaaacaattgccttatttgtattgatgggaagatcaaatttaaaaaaagacacata
atagtgtcatggctagccttaaaaattctcttgactaaattaaagagcaaaaatctgacctaaaacaaag
ttaaaatcttttgtacgctcaaactgcccgctttggattccctgcgggattaacaatgaaggccactcca
tcttgtagtctggtggttaaaattccatactttcaccaccatggcctgggtttgattctcggt
>HERV15I   a consensus sequence.
[encoded data, 8804 characters]
aatagtggtgctttctattaacatctttgttttaaaaagcaccaaaggggggaaa
>MER111   Interspersed repetitive element.
atatatcttcagcattttgtacatgttctttaattttattcttttccttcacaattgagcacncagtnaa
ctgaaatataaaatgagactcngattttgntaaanatttatnattttgaccacatctaatnatttctatc
tttrtcycaattatattagattatsagacctacgcttctttttactagtatcagcacttttattttnata
tttwttttccactcatttttaataaataanngrnaaaatgcaataaaataktcatatant
>LTR62   Putative LTR from human endogenous retrovirus - a consensus.
tgtatagagcacccttgacataagtaactccatcttagaaaaagactccatcttacatttcaaaaggcat
cttgccaacagggaccagatgttttgcctaatcaataaagactgcayccaaccagataaggacataaaca
agcacactcttccactatcagtcctcaccagaggactctgtggccataaaaagagcaggacttcaccagc
tcaaaatggccatcttaacagacaccgtcttgctgtcacttgtgataagcacccagcatctgccaccaaa
ggctctgcccacatcaaagactcttccttgcaagacantgaggctgacggactgcctggatcaggccagg
acactctttttgtctacgtcactctccctggactggttcgttaaccctttttcctatcccttttctcttg
atgttaaatgttactttgtttgttgtggaatgtttaatctataacatttatatattgattaagtatacta
ttatgtatggtttgcaatattgactgacttgtggagtggcttgagcctgtgtgcccatggctctgactac
cgagtgaaygggaagtactaaggagaattgcctccttgggaactccatgtagctcgtggcttttgtgatt
gaaatagcatcaataaaagtctgacattgtggaaagacacaaanatgtgtggacctggttatctctgacc
ttgcrctgctcacgacaca
>LTR64   Putative LTR from human endogenous retrovirus - a consensus.
gtgagacaaagtaacaaatgtaagaagccatgtctgctcatttctgcttgccaacataatttcacaaagc
ccctgactctgtgatgacatgcagctctcnagaaagatgctttgaagacaaarcaggatrgagcacacag
ccccccayrtctcttgcctgagtcactayattccttaaaagataaatgaccctagtccttgccttttcct
acacagaagataatgtctgacagggttagtgattatgcctctgtaatctataaccagatgtactcttaca
cccaaactttgatgtgattctgctctaatgtaacttctgagcaagtttgatgtgattanttctngcaagt
ttgatgtgattttgcacgtactgaacctctaccacctgtatataagctgtgggctgaaacactgttttgg
agcagtctgacagaacctctctgaaagactgctcccaggctataggcntycctcagtctacagtcctcag
taagacttctgaataaaactaactttaattctttaaaagcttgatttttttntttctttagttaaca
>MER112   Interspersed repetitive element MER112.
tccagaccagtggctttcaaactttttttgactatgacccacagtaagaaatacattttacatnatgacc
cagtacacacatacatatatataactgaaacaaaagtttcataaaacaatacttacccttactatatgta
atgcactctgatattttctattctattctattctattttattttttttaaaaaaaaatgctggttataac
ccactaaattgatttcataacccactaatttttgggtcacracctgcagtttgaaaaacactgctctaga
a
>MER113   Interspersed repetitive element MER113.
tttcccaaacttcagtcattttcataccaccttcatgatttttgccatatctatataccacctgtactat
ttatttacttaatttttctttaaattgactcactttttttatttaaataaatttattttaaaaggaaact
ttatatcactaccataaatggaaaaccagtatcacttgccataaatagaaggtaaccataaaaataaatt
acaatgaaaacaaaacaatgttattaaattctagctagatactgttgcctgcctactgcaaggctctgag
cctgaggcctgctctctctttgttaaaaagagagattagcaagtgttagagaggtgttaaagacatacta
agcaccaaactgagactttctccttgatgtaatcagaaggattgaaagagaattgaaaagggaataactt
tctcactatgtgattcaatgttatttaatgccatatccatgtnctacctaaaatcatctttaaataccac
cagtggtacatatcccacactttgggaaa
>MER110A   Putative long terminal repeat from endogenous retrovirus.
tgagaactgaaaccatctaccacccacacagcttactgactgtctacattaacatgactttactattcca
ctgtcttcatcaacataactttactattccaggaaactcttgcccaggaagataaaagttgcaaataact
ttattgttcatttcaggaacttcctaaaaaacccatcaactcttcaatagaaagcatcaaacgacagttt
atccccaagactctttgaaacccttgcctcaaaaccctcaccttgctgtgtctgtgtccaccaatcctaa
actattatatcatgatccttacccaatcctaatcaagcccctacattgaaagacctgccttaaatcagac
tccaaaatctcaataaatatcctgactttgccctccctcctctgagacactactaagactctgtaaggtg
gtgctcycccttaccacagtaagcaataaactcagctttgtcttatca
>LTR33A   LTR from endogenous retrovirus-like sequence (HERVL33).
tgcctatttgctctcagatccatccctgcccttytcctgctctgctctntatcacaggaactgcatttcc
caggctcctttgccacctggcttctaggtaggtttggccaatnggaggcactggcngnaggagattagag
ggcaggaggaagggagaagccagggtatttctccccctccctctctgccttgggcagtantctctctagc
agcagttgcatgcatctcctctgtggttccagctcctaccagacagccccnccctctgtggttccagctt
ctaccaggtggccctggctcctgggctctggtaattccacctcctccctccctttgtccctccagcccta
ggggtggtagtagcttcttgctgttgctaatctctgggttgcctcaccattgnttccctgtttggcttct
cagctctttcatcacctgtgtaaccaattccctgtattaaattccctctgtttgaaatacctagagtggt
ttctgttttcctgattggaccctgactgataca
>MLT1F1   MALR long terminal repeat; MLT1F1 subfamily: a consensus.
tgtccacaaattctttgatactcctcttaagaggtggagtctaattcccctccccttgaatntgggctgg
acttagtgacttgcttctaaccaatagaatatggcagaagtgatggtatgtgacttctaaggctaggtca
taaaaggcattgywgtagcttcctncttgctctctctctctctctctcttggatcactcactctggggga
agccagctgccatgtcatgaggacactcaagcagccctgtggagaggcccatgtggcaaggaactgaggc
ctcctgccaacagccagcaaggaactgaggcctcctgccaacagccatgtgagtgagccatcttggaagc
agatcctccagccccagtcaagccttcagatgactgcagccccagctaacatcttgactgcaacctcatg
agagaccctgagccagaaccacccagctaagctgctcctaaattcctgacccacagaaactgtgagagat
aataaatgtttgttgttttaagccactaagttttggggtaatttgttatgcagcaatagataactaatac
a
>SATR1   Primate satellite-like sequence - consensus.
agggagaggatgatattactcccaatatcacagggggtgtacaccccccctgtgatattgttcctaatat
ccagggggggagaggatgatattactcccaatatcacagggggtgtacaccccccccccccccccsyaca
ccccccctgtgatattgttcgtaatatccagggggggagaggagaggatgatattactcccaatatcaca
gggggtgtacaccccccctgtgatattgttcgtaatatccagggggggagaggatgatattactcccaat
atcacagggggtgtacaccccccctgtgatattgttcgtaatatccagggggggagaggatgatattact
cccaatatcacagggggtgtacaccccccccstacvcccacmccccctgtgatattgttcgtaatatcca
gggggggagaggatgatattactcccaatatcacagggggtgtacacccc
>MER114   Medium reiteration frequency repeat - a consensus
tgaagttgttnacattttaattgattcttctctawagaccataatatttttaattgagaaaatattctct
ctataggtgctgaggtacctggtaagctcagagcaaattctactaaatggargatattbtcaattttaat
tttttttttattgaaatgtgtaaatatttcagcccaaatatttttataggtattatctttttttgtctcc
attcagaatacctttctttgacaaatatttttacaagacaaaactcatcaaataaattgtctctatttat
gattcttttgaatattttaccaaatttagatgctgcaaaattataggccttctcaattttattccattct
agtacagaatataaatttatccaattaaaaatagaagctccatcaaaagattcttcccataagttaagat
attccaaagtacaattatagaattatagaatttcaaaattaaatcttgtatacacatttgagctctcatt
atttaatttgttcagttcctcccttgmttttgtaggaataaatttcaatgtctttctgtgtggcaagctt
tgttttnaataattacaattynctaaaactttaaaaagctgaanttttttgntctctatttattgaanac
nttgattaaagatttcca
>MER115   Medium reiteration frequency repeat - a consensus.
aaggctccactctggccctcctccngctncatgcccttccccanggggtaaagagtctgtggggccaagg
ggatatgcccaccygaaayccatgcccccctttctagaccacgctccaggtacctgggactccagaattc
cctgtccanatagccccgagcctgcttccagggccttcttccytttccctaggtctgtcctccagagggt
ggaccgtgccaccagtgtgggcacccctaggcctgagagatggccaaggggtagctgtttgtaggggggt
tagntgtggacagagcttggacatgcgggctggggtgtccacatacatgcanaggaggccccttatggtg
taggatggagcygggggtgggaagagaagggggagtaggccaggggccaggggctggctctcccccaggc
aggctgccatgttctggcatggaactccaaggagtctgagaattctaaatttgaacctggccttccaggt
cattatgaaggtatatttgtcaaggtaggagaatagaacatattttaatttaacagtttgttagcttgat
ttataacttttaaatatttagacatatggtatgtgggcctccatttgtactcttgccctaggccctrcaa
atgttaggggtgggcctgggttctg
>MER116   Non-autonomous DNA transposon - a consensus.
tattaggttgaaccatatgaaattgctaatattcgaccatttttgacctacaaaaatggcaatttcatat
ggttcaacctaata
>MER117   Putative non-autonomous DNA transposon.
cagggatggcaaataggtttcatctcatgtgycaactctgatcgattggtagtggctgcctggagtgctg
tgttgagaaggattctgaggctgyatctgggctcagtgggaaagagtgctgtgattgattagtgatgtct
gccatgggcacaggagggggaagtagcagcanatatgctatgtatttgccatccctg
>MER20B   Non-autonomous DNA transposon - a consensus.
cagtggttctcaactaggattgtattaccccctaggggacatttggcaatgtctggagacattttttggt
tgtcacaatgattgggggggrtgctactggcatttagtgggtagaggccagggatgctaaacatcctaca
agcantgcacaggacagtcccccacaacaaagaattgtcctgcatcccacatgactttcaaatgtcccac
tagacattcatgtaggtgaaaaaacctgtttataattatctgagcctagaacctaactctgttttacata
taaacacaaagtattttttgcatagttttaatatacactgaattttctaggaatgcaactacvattgtat
gtaaattgagggaagattgtactttgttttgtttagaactttaccaaagagttgttcaccattttggaaa
atcatatcactaatggncaatactcgctcatggtatttgagttgccaatacaacacacctgtatcagtct
gcatttgtagctgtcacattcacggtgattctatngtataggtgcaagcatctgactacttcattatgtc
ttctagtgtagtcatgcctgagcatttacatattgaaatacatattattttattataaattactttcctt
ttttctcttttatattacagttagagcattatattgattttttttaaaattaatgtgtataggtaggtta
tattatctatgaatttcatttcaggataaataaaagaggcattacaaaatatttgttataaaaaggggta
ttgggtctgatagggttgagaaccactg
>LTR65   Long terminal repeat - a consensus.
tgagaaagtaaaaatctgccctgccattcatcaggctgggataacagacacagataaagccagctgcaaa
gtataacaggaaacaatatttctcccaaggacatactgcagctgtaaagtgtcataacaancctccttct
ttgagtgactactgctttcttactcactgagaaaccttgttctctaaaatcatagactatcagaaacttt
gctgtttgaaattatatcagtaagaatgaaacatcccactcttgcctggaggatctaagtcactttgaca
cagagaagcagcctcaatttccaacccaggtgcagagcttcagataaggggtttctggacacaacattcc
acatttatcttaactttgtagtttccaaggaaacaggaccctgggtccactttgcagtccaggacctgat
gttgacccctttacacacagccctgctttgctttgagcctatcannntcaaaacactgcttcatttaaat
ttcacctaaactccacccttcccccaaatcctataataactctatcttttcctttgtttggtgagatgct
ccatggttcctctggtgtgcagtctccctcattgcaataagtcaataaacctgactttgttggactacag
gtttgtccctggtggtcttaggctgattgggctaggaca
>LTR38B   Long terminal repeat - a consensus.
tgtaaccaggcagcttarcttcaaaatgcattttaaaacttttttttccctttctcttgagtttcaagat
ataaccttgaagcaaactgcagaagccttttctcttatccttaaaatagactccanatccctccctttct
caccgtatatactcccttcacatttatctaactgtatgctagtatctaattatgtgcttacttagaagtt
ccaggggctaatcttgagacagacagaccaagcctggagacccagctgcaaaattccagagattacytca
aggcagctagtcaacaaccyrgccattgttgagatgaygccagcccacastccaggtggactgggaccca
agatagccaccggaaaaagacacacagacnttgtactcagcacaattcttgcmagcacantkngnaatgc
ctyccwtatcaagttttccctttttaaacccttgccttcyccctaaaarttgaagyggttgctttggata
ggaatcyggccrcttccccattactagttttggttaataaagtcactttctttctacyagacctcactct
tgtcaattggactctgyaagcagyragcagccdgacccatgtcakttaca
>CR1_HS   A CR1-like fragment from the human genome - consensus.
gaggttcaacaaggccaagtgcaaagtgytgcacttgggttggggcaatcccaggtatrtatacaaactg
gggaactatgagcttggcagcagccctgtggagaaggatctgggggttctagtggatgawaagtttaata
tgagccagcagtgtgctgttgctgccaaaaaagccaacagtatcctgggctgcattaanaagaggattga
cagcagatcamgggaagtgattatacccctttacaatgccttggtgaggccacatttggaatactgcatc
cagttttggtcaccccaatrcaaaaaggatgttgagactttagagagagtacagagaagagcaacaaaga
tgatcagagggctggaggacctaacctatraggaaaggytgatggaattgggcttgtttagtttgragaa
gagaaggatgaggggagacatgatagcagcctt
>L1ME4   3'-end of L1 repeat (subfamily L1ME4) - a consensus.
tttggcaatatctatcaaaatcacacatacatttaccctttgacycagcaatcccacttctaggaattta
tcctacagacatacttgcaacatgtacaaaatgacatatatacaaagttantttattgcagcattatttg
taatagcaaaaaaytggaaacaacctaaatgtccatcaataggaaaatggttaaataaattatggtatat
ccatacaatggaatactatgcagctataaaaaagaatgaagaagatctctatgtactgatatggaatgat
ctccaggatatattgtttaagtgaaaaaagcaaggtgcaagaatagtgtatatagtatgctaccttttgt
gtaaaaaagaaggaaaaataaaaatatatatatatatttgcttatatatgtataaaataactctggaaaa
ataaacaagaaactnataacagtggttgcctcttntggggggaggggaactgggnngntgggtggctggg
ggacatgtgggatggacagggatgggagggactgacttttcactgtatacctttttgtactttgtacttt
ttgaaattttgaaccatgtgaatgtattacctattc
>L1PAXX_5   Primate L1PXX subfamily 5' end - a consensus.
ggggtggggccaagatggctgactagaagcagcwgcgatcggaggctcccatggaaaagaaccaaaacag
tgtgtaaatcctgcaccagcaactgaggtatccaggttctctcatcaggactgactaggcagctggcatg
acccatggagaggaaggaagagcagtgtggtgtggcggcccacctgagagccacacggggcaggggagcc
cccaccccccagccaagggaggcagtgagtgagcatgctacccagcctgggaaaccgtgctttttccacg
gaactgtgcaacccatggatcrgaagatcccactcrtgaacccacrccaccagggcctagsgtcccaacc
ccggagctgtgcagattctcaacagcctctcagctggaatctgcttaagcctaccgagctcccgggggga
ggggcgaccagcaccacagctgcagctgcctgctgtctaagccatttgagctccttgggggaggggcagc
agccagcactgggactcacaactgcctaacacnctaagctccctgggcaggggaagggcagcatccatct
ctatagctccaggctgtgcttttcccctgctggagccagggaggct
>MLT1H1   (MLT1H1 subfamily) - a consensus.
tgagancaccatgcttgagaggccacgtgtaggagctcnagtnranagtcctagctgagcccagccttcc
agccatccctaccaaggtaccagacatgtgantaaagccatcttggattgtctaggccagcccakctgcc
agmtgaataccactgagtgaccccagtcaatnctayatggancagaagaatcaccnagctaagccctgcc
caaattcctgacccacaaaatcatgaratataataaaatggttgttgttttaagcyactaagttttggga
tacttttctacacatcaatagataactggaaca
>LTR2B   related to HARLEQUIN - a consensus.
tgagggaagagagagaccctctcatattgttttatattgttttatactcagtacctgttttaagaaaaaa
agaaaaaacaacaaggaagtaaaaccaaagacaggcagcccggcgccaggcccgaaaccaggcctgggcc
tgcctggcctaaacccagtagttaaaaatcaactcatgacttagaaaccgatgttattcatagattccag
acattgtatagaagaacattgtgaaactccctgccctgttctgtttctctctgaccaccggtgcatgcag
cccctgtcacgtaccccctgcttgctcaaatcaatcacgaccctttcatgtgaaatctttagtgttgtga
gcccttaaaagggacagaaattgtgcactcggggagctcggattttaaggcagtagcttgccgatgctcc
cagctgaataaagcccttccttctacaactcggtgtctgagaggttttgtctgcggctcgtcctgctaca

>MER101B   A subfamily of MER101, putative LTR - a consensus.
tgttaaagtatgcccctagctgacagacaaaatggactccctgtggctaamtgaggtgctcaaagttaaa
acagaaccaggcagccatggctgggtgagggagcagtcacatattctgtgttctcagaaagatgtaaaag
tntcacaggacctccctttctacaatcaagccaaaccagttcctattgtyagtgccaagataaactgcng
ccagaaaccacctccccacaagcccactagaaacaaacatctgacagagacttctgatttggggcttgga
aaccaaccaatcagagctcacctaccccagccaatcagggctcagctgtatcgaycaatcagaactyagc
tgnnccaaccaatcagaactaagcaagtttcaatccttcatttgcataaatgracctgattgggaacctg
ggcaggaagttttgctataaaacccaaancttcctttgttctccggaaagcaccttcattttacactraa
ggctgtgtctccctggtttgcaaactgttcactggaataaactctcctccaaattccttttnagagaact
tttgttcaca
>MER45R   Autonomous MER45 DNA transposon - a consensus.
caggaccggctacataatttgtgrgacccagtgcaaaatgnaaatgtaggancccttttcaaaaagcaaa
aaaaaaatgccttaaagataataaaatataaaattttttttttaaaatattttaacttataaaatgtaat
agggataatagtgatacataaataaattataacaacataaacttataaattgcaaaaaaattattttggt
gtcataattttatataatataataaataataatactttattaatgtgatatcttgattgatccataaaat
ttttttggctcacttttctgcaaattcatttattaggttattaaaatttaaatacttttagcaacttcat
tttcaattgatataattgaaagcaacatcaatcactcttggcaaatgcaagattacaaataattttttat
aatttttaattttgagaaggatctttctgctgatgcaactgttactggagctgttaaragtattttatat
gctgtgacaacattaggatacatttatgataaattattttaaaatataaattttattacatytatagatg
atgattcttgtagaacaatttttctaaaaagatttaactcttcatacaaatcagttttatataagtctga
atttaatttaaattntaaatnttattgtaaatttatacaatgatattttaatgtanttcctctgattttc
tgtaacttgtggaggnttataagctgaaagtggcttcatgatttntatataattcaaaatncctatttat
gcattctatcactg
>MLT1G2   MLT1G2 subfamily - a consensus.
tgtggcagattgtattttccaaagatggccacaacaatatgtcccttccacatgctttcttcaatgtgac
tttgacactcttcccatcaagaggtaggggtctatgtcccctccccttgaatctgggtaggcttgtgact
gcttctgaccaatagagtatggtagaagtgacactgtgtgacttctgaggctaggtcataaaaggcaatg
cagcttctgcctgccttgttcgctggaacactcactcttggagccctgagccaccatgtaagaagtctga
ctaccctgaggctaccatgctgtgaggaagccaagccacatggagaggccatgtgtaggcattctgatca
acagccctagtgtttgagtcatcccagcccaggtgccagacatgtgagtgaagaagccttcagatgattc
cagcccccagccattgagtcacccccagccttcgaatcttcccagctgaggccccagacatcatggagca
gagacaagccatccctactgtgccctgtctgaattcctgacccacagaatctgtgagaangcataataaa
atggttgttttaagccactaagttttggggtgrtttgttacacagcaatagtaactggaaca
>MSTA1   Long terminal repeat - MSTa1 subfamily - a consensus.
tgctatagtttggatatttgtcccctccaaatctcatgttgaaatttgatccccaatttggcartgttgg
aggtggggcctagtgggaggtgtttgggtcatgggggcagatccctcatgaatagattaatgccctcctt
tgnggtgggaatgagtgagttctcactctattgtgggaatctattagttcccataagagctggttgttaa
aaagagcctggcacctncctcctctctctctcttgcttgcttcctctctcaccatgtgatctctgcacac
gctggctccccttccccttcaccttcygccatgagtggaagcagcctgaggccctcaccagatgcagatg
ctcgcaccatgctttttgtccagccagcagaaytatgagccaaataaacctcttttctttataaattacc
cagcctcaggtattcctttatagcaacacaaaatggactaagaca
>MER118   Medium reiteration frequency sequence - a consensus.
ataaaaataaaactattcacaattctagtattcaatatccatctagttgccaatgtaaagaatcagtatc
atacttcatgcatgttacatctagacctacatatatacaaatttaagagtaatatgaattgtttaatatt
gcaaaatgttcctcagctaccatgtgcaactgttgtgaatactgtgctaatttgtgagtacctctggaac
cacaaattggaacatgaagagaagcaagaaaatggacacttagcactactgggaaatgatactttgttaa
gttatgcaagaatctattgcattcatgctatctgaggagaggaaggatttgacaagttaattaatttgtt
ttcttttctcttacctaagtgcttctgctgctcaaatcctccctacactctaaagcagtgtctatctctg
acgtcancagcagcggcacaacccacaaaccttcatggcatttggacacagtcacnccttttgttttgag
gacanagggcaagagatgtggagaagcatttccctggggcctgaayagtgttagtcacannagagtagat
gtttagggttataggttgtgctgtgccagtactgagtaccagatcccaagtgacagaggtacccatgtgt
tctttatttaataaatgtatgtgtgtttgtgatatgtggggccctctaaagcatggggcccagggcaggg
gcccctcttgcctgggt
>LTR6A   LTR from retroviral-like sequence S71.
tgtgataccttaccttgttttaatatgacacagactctcccttagctgagaaagccagacagactccatt
tggctccttcatttgcaagacatcaagggctccttacccacccccttcctcaaggactcgtgcaagctga
ctcccagcacatcaaggtagtgcaattaaccaataaggtactgtggcaagttatgtccacagttcccaga
aattcgcccaagtgatagtaccctaagcccccgcgtttgtgtctggtagatagcagccaaagccctcgca
cctatcaccttgtgatgtgatggatttaaagcccctgcacctggaactgtttgttttcctgtaaccattt
gtctttttaactttttttgcctgttttacttctgtaagattgctacagctaggcttcccctcccctctct
aaaccaaagtataaaagaaaatctagccccttcggggccgagagaattttgagggctagccatctctcgg
tcgacagctaataaaggactcctgaattaatctcaaagtgtagcgtttctccataactcgcttggttaca
aca
>L3   Human LINE3 element, 3' end - a consensus.
attatattcagttctgggtatcacattttaagagagacattgacaaactggaacatgtccagagaagagt
gaccagaatggtaaagggtctgaaaaccatgtcatatgagaaatagttgaaggaactggggatatttagc
ctggaaaagagaataggggagacttagagggagacatgatagctgtcttcaaatatttgaagggctgtca
tatggaagaggaattagacttattcttgtgcagctccagaggacagaacaaggaccaatgggtggaagtt
acagggaggcagatttcagctcaatataaggaagaactttctaacagtcagagctgtccaaaaatggaat
gggctgccttgggaggtagtgagctccctgtcactggaggtattcaagcagaggctggatgaccacttgg
cagggatgttgtaaaagggatttctgcattggatgggggattggactagatgacctttaaaggtctcttc
caactctntgagattctatgattctatctttcaggga
>LTR66   Long terminal repeat from endogenous retrovirus HERVL66 - a consensus.
tgttctgtgcgggaaacgcgtgaggggagaagaaaagacacacacacaatacctttaagggtaaacaagc
tttatcccacgtaaatggcaatgcagatataataagcaaatgatataataagcaaattgatataataagc
aaattgcaatgggaaggggagaagggaaaagatatatatatatgtatatatatatatatatatatattta
cactcaccagactatggaggattcaccaccagactgggaagcaacagcctgggctccagagtcggccact
catccgtgcacagacgaggagaggtctcatgaagcttyggygcagtctgggaccctagctctttttgtaa
cgagttgtttggcatgaggcccagtcacgagggcccttcacgactgggctcaaggaacacaaaaaggtca
acttgtttttgtgattgtctattgtttttcaataactaatgtataggaatagattgaaatagagatttct
ccgaaacagcgctggatgaatgcctcaaggggctcacacaacctgttccaggacttggtgaccattgttt
gtgtccatgttcaattgagttcaaatttaatatttaacttttcctccaca
>PRIMA41   a consensus.
[encoded data, 7810 characters]
cgtccctctgcaacccttaggattaagggtcttcttgtaaagggaggggggagata
>MARNA   Human non-autonomous mariner-like element.
ttatacatccaaatgaatgttntcnttcaaagtagtcaccttgggaaagctatacatttatttttaaccn
awcacaattctgccattgatcaaaacatttttggaacttctcttttggaattgccttcagaaccagttta
tgagccacataagaaaatcagtctcattactttatagtcacacctcatttttgaccaaaaatagtattac
ccagtttgatcacccaccttattcaccagacttggctctgaatgacttttggctgtttccaaaaatcaaa
tccaccctcaaaggataaaganaagatttgccaccattgaggatattcaaaagaatatgctgcaggctct
gaaggcaattccaaaaagaatgttccaaaaatgttttgagcaatggcagcatcattggaataagtgcata
gcttcccaaggtaattattttgaaggggacaactctcatttggatgtataa
>MER119   Medium reiteration frequency repetitive element - a consensus. 
tagagcagaggttcccaaactttctcagttcatagtgcccttagtgtctcagtaattttttcatagtgcc
cttaggcagtgtctcagtaattttttcatggcacccctaggccaaaagaaatacctaacagttcyattta
ttaagtagttaggtccaaacaacttaataagtatttatgtcctaacaacttagtagccatttgaaaaaat
aatacacataaattgaaagaaaaaaaaaaaatatttttatttcattcttaaataaccacaattacttact
aatgggatgtgtgtgcctgttgggcactgcacaacttctcaaaccttggaatcagattggacactgccac
cctcatttcctgttccacattgattgnttttcacatagtacttgctttttatcacagcaaccactgaaaa
cccagcttcacaaagatatgatatcatcaaaaggaatgtagcacacatgatctaatgttgaaactgtgaa
ctacctcaagctagtagt
>LTR67   Long terminal repeat - a consensus.
tgtcattyttttggcnactcagcatttgaacacccttcctatgtttggggaatttcccaccttataaatt
ctacctctttaaggtagaagccagaaanctcattttcccagcctcccttgcagctagggtgcwggcatgt
gacctaggctccgccaatcagatgcacccatgcagcaagacttcaaattagaagctagtgatgcaaagaa
gcaggtgccatgcagaatccactcnngggtgagagtggcagcagctggcagagagttttcagaggcagga
gtggcagagatccaagtagtagtgtccagtgttcatgtgtggtgcaagtggtggtatgcagtgtccagta
gtagcagcagtggtatcctcactgtgaccagttctgcagtgtgatttgggcngcattgttcctggctgta
tagcctctaagcctggttctctagccctcctagagattctgtgagctacctaatatcctttaatattcct
ttaataaattccttttctgcttaaattagccagagttggtttctgttgtttgcaactaagaaccctgact
gataca
>L1M3DE_5   L1M3DE_5 LINE1 repetitive element - a consensus.
gcacacttttccagcwgctgcctgagggtctggcttctaactagcctgcatctgggagctgatagggcag
ataaacaatagacctccaggagcctgaacaggaggttggcacttcccatgccttctccccagctcactcc
agtgataaatccaggtctacagattctccctggaaggagtttgtccacacatcaagcgccccaactttta
tagcttccacccaagggactggctcctaaatcacctagctctgggagttgatggggctttgcatttatga
gtctccctagaccacagagaacaaagaggtggttttaaaacaggcacacttccagcagctatctccccag
gatcagagggtgcagcctgaacatgagtacaggnatttgccacagatcctctccctggcttagtgcagag
agagtgggagataaacacccatgctcagcttcaccstgaagatagaagaaactggaacatacatccaaca
ccctaacctttccagctacatctagagagtctggtttctaccttacctgtctyagagtactracaggata
tggcacatcctaatctccagggggccaccaaaaacanaga
>RICKSHA_0   RICKSHA_0 repetitive element - a consensus.
gggtttggatcataatcccaaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatccctaaagtctaaaatccctaaagtctaaaatcccaaaaattcacacaggatggttgcatcat
gttaggcagaactgttattttcttattgtctttatgcagaaaaaatggattttaattgaatccccaaacc
ataatgacagatttggaattaggtgcgatcaaggcttctaaaagtgaatttcaaggtgttaccaataaag
tttgtttttttccattcagcccaatgcatttggtggaaaattcagatgagtggattggccatgcgatacg
gcaacgacgaaaacttcagtttaaaaatgcgtcatttgcctgcattggcattccttccagctgatgacat
tccgggagcttttaatgaattaaagccgcatttgcctgaagaagtcagcgaagttactgactggttcgaa
aataattatgtgcacggtaggataagaagacacttacacaacggtgttgccgttcgattaccagtattgt
ttctaccaaatttgtggtctgtatatgagtgcatgcagaatggatttctatatacccaaaacaacataga
agcatggcacagaagatgggaaaatttaatagggaatgctcatgtcggtgtatatcgaatcagaagattc
aaaaagagcagcgccacgtagaaaatgaatgtgaacatattctccgaggagagccatgtcctaaaagaaa
aaaaaaagcagctattcatcgcgatgcaagacttcaaaatatagttaatgatcgtgaaagtcggccagct
cttatggactatctccgtgcaattgcccataatctatccctgtaatatactttttcatatgtcgaatttt
ctttttagttttttttcactattttaaattgtcagcattattttttacaattcgctatgctatgtatttc
atcttcgcatcatttccaatactggaggtataaattgtgtaaagacttttagagagttctaattcgtttt
atgcattttttgcaaatttgactccacgaaagtgcattatcacaacgttgactttgtgtgtaagcattgt
gcgtgtacgtaaaaacgttgaaacttcctcaataaatgaagagatgtcctttttgtacatctgcatttgt
gaaagataaaatttctcgagatctcggctctttgggcgactgcatatgcagtggtgacccatcgcggttt
ttgatcgatctcgtcaaaagacttaggttgttcgtcacggtatttcagatgaccgcagttataaagctgg
gtgcacacaattaccaaccatagtgatatgcgtttatacatttccctttttgacctatttctttatgaat
acggttcgtctgctcataactgttatacccgtgcgactgtcattagtatacctgagtgtttatgcttgca
aaaatatgtatgttattattgcctattttattgtgtaaagtggcctatgaagtgttctgtcatgttttta
tatgtttctcaaataaatccccttttaaaaatgtaaataaatatcttttaaaaaatttttaaattatttt
ttccagaattatatttttgggattttgatctttcgggatttcaacattcgggattatggcgttcgggatt
gtgtctttcgggattatgatcggctccc
>L1MDE_5   Expanded 5' end of L1MD/L1ME subfamilies - a consensus.
gaagtactctccttccccaccaggcctgagactcctcccctaccaagagataccaaggtgaccaggtggc
accagcaagagggatcctgccacaacaagcagcctggnnnancctggaagcactctctttccccatgggc
ctgagactcccctcccctacccagagacaccaggtatgcyaggcagcactagcaagggggatcctgccac
aacaagcacctagcccaggaagcctctttatccccatgggcctgggagactcccttccncacccacatcc
cctcccctnnccccacctagagacaccaggcagcctggcctggggaagctccttctgccccctcaggcag
caccagcagggaccagtgggagccccagtagcaccagataaaccaagcagaccaaaatagcactgcaaag
gctctgaaaattaaactgtcattggaaccacagcccacaaaaggtaggccaggacctacatgctaaacct
aaacagggtgact
>MER4E   internal sequence belongs to the MER4I group; subfamily MER4E.
tgaggactaagctctgatttttttttttttntttttatcttgcccaaattcctatctaaggggtctgggg
agtcatgccctacaaaccataaattctcatcagatgggttttatttaaccctatatatcgtgacttactt
tccaatctgactctggcataacattacgagacaaggaagaaaatcaaaatattttaccccaaaacatgtt
tctttgccatatcttgaaatggccctgcaaagctgtcctttgtgggggaaaatctacatctgtaaagaat
ctctattaacatagctagatctttttcttccaggccttcccaatcctgaagagattaactaagagtctag
caccttttaaaggtctgaataggaaacatttgtcatctattstctctaagggcngccactatgagacttc
aaaagaaccttggtctccacaatcttttatcttaacctgaacatttcctttctattgatcccaggtcttt
agacaaactcaaccaattgtcaaccagaaaatgtttaaatttacctatagcctggaagcccccactttga
gttgtcccgcctttctgraccaaaccaatgtatttcttaaatgtatttgattgatgtctcatgcctccct
aaaatgtataaaaccaagctgtaccccgaccaccttgggcacatgttctcaggacctcctgagggctgtg
tcacgggccatggtcactcatatttggctcagaataaatctcttcaaatattttacagagtttgactctt
ttcgtcaaca
