>MER79|MER79  Primate MER79 repetitive element - a consensus.
tgrtcttsktggataccactggaggaggtgttggngcgcctcgttacagcttcatgagggtggaaatcta
ggctccccactcggcctttncaggtgtgggtgggagtagggccacagtttttctgtggtgtttggctaga
gtagagcggttattgtctaaaagttttctgtcttgctaggctgcccctttcytggtcctttggntagaga
gagcaggcttttttggggctttctttgtctgtacccattggcgtttccgggttgccggcttcttcggttc
caagtctgggatatatgaggcaaaaagaaaacccaggaactcactaccgtgtcattccttgggtcccgag
gtccctagccggtctgccttctctccacctttcggagtcttcttatgcttgttttacatataatgctcag
ggtttttagttgtacttagtgggaggaatagggaagagtacatctactccatcttcctggaagcagaagt
ctcccgctttgtttttaa
>L1MD1_2_5|L1MD1_2_5  Partial L1MD LINE1 repetitive element 5' end - a consensus.
aaaaagcggagacttccgcttccaggaagatggagtagacatacttttccctattcctcccgctaagtac
aactaaaaaccctggacattatatataaaacaaacataagaagactccgaaaggtggagaagaggcagac
cggctagggacctcgggacccaaggaatgacacggtagtgagttccctgggttttctttttgcctcatat
atcccagacttggagctgaagaagccggcaacccggaaacgccaacaggcacagacaaaaaaagccccaa
caaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaacttttagaca
ataaccgctctactccagccaaacaccacagaaaaaactgtggccccacycccacccacaccagcaaagg
ccgagtggggagcctagacttccaccctcgccaggctgtaacgaggcgccccaacacctccaccgggatg
gtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggcccmccttccc
cttgccmctgcggtgtcagtggaggccacgtgggaagtctggacttccaccsccacccagcagtaatgag
gcattcctmcccctctccgctagggtggtgtcagaggaggcctagtggagagtcaggactttcgccaccg
cccagtggtaatgaggccaccacccangaaggtgtcagtrgagacctaatggggagccggaactcccacc
cccgcccagcagtaacgaggagccyctccccacctcaggtgtcarcggaggccgagtggggaacctggac
ttctacccccacctggcagtaatgaggcagtaccctcccttcccctgctggagcggtgtcagaggaagcc
ggctaaaacagaagatttaaataagatccggagtctcataacataatacccaaaatgtccaggtttcaat
cgaaaatcacttgtcataccaggaaccaggaaccaggaaaatctcaaactgaatgagaaaagacaatcaa
tagacgccaacaccgagatgacacagatgttagaattatctgacaaagattttaaagcagccatcataaa
aaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaagaaata
gaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaaatacaa
taaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaaccagtga
acttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaaaaaatg
gacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtcccagagga
gaggaaaaag
>MER4C|MER4C  a consensus.
gttrgngttrgngattgcnnntgtgaaaggaaaataaaaacttgggacccnaattcactntgccaaaagg
aaaaaattaagctgaaanctgagtcatgcaagaaactgcctttccttttnttcctaagcagatanctaca
gataaaaggttaaatatctccacagrcagtgactctatgttcaccttycytatgtaaagtgkcgatttac
tgagcacgmkakgratagataattgactattcccctacctgctccttttctcttgcaacatgtggattac
cayamcctyyytctttcccctccagcctacytttcccntttaaatattgaagccctcaaantcatcnctg
gagaaaggcacagaccacagamtstttytgtraytycgtgtttctcctnggcatgtccttaacnttggca
aaataaactnctaaatcgattgagacctgtytcagayacwtttkggtttaca
>LTR9|LTR9  LTR from human endogenous retrovirus-like sequence (HUERS-P3).
tgaraanaaactgatataggagttaagaagaaatcacttaggcagatagcaagggtatgggagtcctcag
taaggcttttctttttaatgaaaagcagccccaaatcattttctaacaaagagcagcctgtaaagttgag
ctgcagacgyagacaagcaagctggnagcttgcacgggtgaatgctggcaggaactagggactagacatg
ttcaagatggcggctccatcttcccttctctgccagccacgtgtacagtaaggagcagacaagatggcgc
tggccaaggggaaagttcatttgcataataagattagggtggrgagrccagccttccccgcgcgctatgt
aaacgtcatacctgatcaaaccaatctrtgagccctacgtaaatcagacaccacctcctcaarccggact
ataaaatccggcacatccgccaccagctggtcttttycnctcggaagacccctctctctagagagagagc
tgtttttctttttcttttcttctgcctattaaacctccgctcctaaactcctcatgtgtgtycgtgtcct
aaattttcctggcacgagacgacgaaccccggtgtatayataccccagacaatgtagccacttcataang
gggrctcgtctrggat
>MER67A|MER67A  Primate MER67A repetitive element - a consensus.
tgctgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcct
caaccttggcctataaagacttgaacaaacactagcatagcttctaacagctcaaggccgcgtccctagg
atgaccctagcccccccttaaagtgcctgcctgagaaagctcaaggctgccagaagaatttactgtttgt
tccagccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaactttgat
aagcgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcactt
ccctgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtc
acctctgcacaaatccaagctgagctcagttcacactggactcttttccctactgcaatagtatgttact
gattaaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67B|MER67B  Primate MER67B repetitive element - a consensus.
tgccaagtgagaaccgcagaactctcggcacagaacaactccgtttaaacccctgcactaagagacttga
ccaaactctagcatagcttctagcagcacaaggccgcgtccctaggatgaccccagcccccccttaaagt
gcctgcctgagaaagctcaaggctgccaggagaatttactgtttgttctagccaacacctgatgataggc
ccctgatctccctttcttagagcatttactaaaaagggcttataattgtgaatccttcctctgtcccttt
gagatatgtatgtatctcctacaactcaggagtgtctttctcaaggacctgagagccatccctttgaaat
gtaatcatcaagaaggatagggcctctgtctcccagtctctgtgggaggatagaatcctaactttgataa
gcgccagttagcagacacagctgggctaatcacattkacactgwccaatcttttgtaatttttcacttcc
ctgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcac
ctctgcacaaatccgaacggaactcagccctttcccctactgccagtagttactgaataaaatccgtttt
caccgctttaactagtgtccggctttgtttatctttgaca
>MER67C|MER67C  Primate MER67B repetitive element - a consensus.
tttaaaggtaaatacaaattaaaaataagaggattgaattntccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgag
atgtatgtaaatctttttaaaagctaaataaacctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaatcatcaagaaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaactttagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
acgagaaattttattttcctttggataaaggcaattagctaacacaggtggccaccccaattaccaggta
aatttaggatgaactgtgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtctt
tgtaatctctttagcagattgtctgtgatgcgcatcacattctggtttaatgcttattcagtaataaaac
ntgttttctttctcttctacctttgtgagaaggtttttctgggttggtaggagattttgtttttaatttt
cccaacaanattcawaacaga
>MER69B|MER69B  Primate MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgagccccttc
caaggccctgggagnagccctagcaatgtgttcacatggtcatatgtttttgtaaaayttgcaaaagtaa
gatattttaaccacaattggttaagactgctgtcyctttccattccgacttcccctccatcacacttccy
cycatgtcgggtggyattggagtggccacgggcattttagggatctagctaagggaaagttgagttgggg
atatattyagtttgggatatattwgtgggatatatttacgtggttcmcagtcacttccgtgtatagttat
gttattgctagccaycccggtataggaatggcttccaggaaaacacactgctgcccactgtgctgactca
yccagcgtcgtgaccagaggcacgggaccggaggtcgtattgtgatatgaacgtgncctgcagtacctgg
caccggaagtatgcgggtagtggaggagaaacgaggtttgaaatgtacagagccaaaagccagtctgtgg
aaaattcttccagtcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgacacctagccag
agcaraagtsctctcttgtcagaaatatactcggcaatgcagcgtatacaattataaatgcamcatgcat
ttatttgcacttttggaagggaatcgtgtgaaatagaatttatcagaactccttgtttgtagggcacgaa
cctgtagctagtactacaaacaktgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgct
gatatgacatgaaatwctgacgttaacgaagataacasttcacttctaatwtwccaccgcaaaaaagwca
tcagtgacaaactggttactgagtgtcattaattctangagcayttaagattagtcactggacgagaaan
cttgaaatgccctgaaatcttacagctcatatatgaaagaaacttggtaggggtttccccaaatttgaca
acaatcctaaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaattttctaaactatc
aataataaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctata
gaaaatawtacaaaattattgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaa
aartattatagaagtgtrtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatg
tttgtggtatttgtcaacttttwaaaatktgtaatttgttgyaatttcttttctcattctaaataaatat
tcacttttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgta
taagcttcaggccccacaaaacctggatctgcccctgg
>MER73|MER73  Primate MER73 repetitive element - a consensus.
ctgttgtgrttyttatcgytatgrtattytttctaatttggtctcgaggtctctctcttgagagtggcca
tagccaagatagccattctctaggagatccctgacccaggrraagttarrttcgartgtgttkgtcaggt
gagacacagtggagcagcacaacaaaacgcatgaaacagaagaaatttattacttacagatcccagagag
gttagaggtgctgatgggaggcggaagggaagtctggaggcggcagggagctcatcgytgggwagggagg
gagggggcagctgcgggagnncgcctttattaaggtctgtggataytatccctcaggctttcctacgggg
gttgtggatcggctggtttaaagaaaacatgycagaaggaggaaacttatttacatgactctggtgttga
ncattaggttttatcatggtcagcagctgtggggtgtgttgggttttgggtcagcgagatgagaaacaag
trggcyatatcgcaaacaaccacatgggagggagaagttttaactagggcaaaggtgacggggtacgact
gggtttcaaacaacttattgtcaggcctaaaaatggatgccgaggcagyaaccgtattaaacgmatttat
gaca
>MER75|MER75  Primate MER75 repetitive element - a consensus.
tttaaccytyttyccgtttgccctgagaatactcgccggtggtgcttgcggctgcagcgtttaccccaag
ataactttgccatgaaatatnttgcttttattattttcacatcattctagtatatcgactttggaaacaa
aagacatcgytctatttakagcattccttttttagtagcggtatttccatttacaaaatatagtaaytct
cgattgctgaaaatgtcaaatcctagaaaacgtagcatkcctatacatgatgttaacatcgttctcgaac
agttgttggccgaagattcatytgatgaatctgayttttccgaaatagacgattctgatgttagttctgt
ttagaaataactccaagaacagtttttatattttattttcacattgaaaatcagtcagatttgcttcagc
ctcaaagagcgtgtttatgtaaaattaaatgagcgctggcagcgagctgcacttttttttttctaaacgg
gaaaagggttaaa
>MER76|MER76  Primate MER76 repetitive element - a consensus.
tgaggagtcccgctcctggyyaaaaacctacgtrtgatttttcaggcctgaccataggcaattacaaagg
ctttacctggcagrcctcatgggggaaagctgccctccccacgccagacttggtgcacagccartgcatt
gcagtctctgaagggagttgcagtcaaggactcangccccctggccggccacgctcttgcgcatatctgc
attcctagcccaggcacctccgttcggaggtctctttattnggrgncttctgtaraggkcttcctcaggt
gcctswgycaagayctctttwtgaggggtggaagcgggarccttgaagacatttntctccactctgrctc
agtactcagtgmttttccactcytntcctgggtccataaaactgcatgaccctttwgytcagggctccct
caacagtgagacgacccccatgtstgtrcymatccaactaacacttgaccagtgccatttccacagggaa
aaacagaacagggggrgymrgtagcatttctctggctttagactcttgcttacactattgaaggacttga
cctttaatttgagtaactttcctttggggcttgttgctttaatcggctc
>MER80|MER80  MER80 repetitive element - a consensus.
ctagacagggnttcttaaacttttttgtgccatgggcccccttggcagtctggtgaagcctmtggacccc
ttctcagaataatgtttttaaatgcataaaataaaatatataggattacaaaggaaaccgattatattga
aatacagttatcaaaatattaaaaaaccaaatttgtaatatagtaatatgtgtgcttctttattaacgca
ttaaataataagacctagcagtgggtctaattattaccataatttcgaagtggtgatgaacataaatggt
attttgagatatctgcaacaactataatgtgatatgaaaatatctgtgatttctattggtgacagagtca
caggtactgctcataccgctgtggttggttgcttatattcataatggaaggaaatgctaaatttcagtta
gaggttggtgaaaataaagatgtcacttttttccccatccgagttcacagancccctgaattctatccac
ggactccttggggttccatggactccaggttaagaatccctgtctag
>MER54|MER54  Primate MER54 repetitive element - a consensus.
tatattttcttctaatttggtcttgaggtctctctctggagagtggctataaactctagccctgccctga
trgggctcnagggnatttggtcgtggatgttacagtgcntytctcanggatacttctttatcctggcgca
tggcctaatgcctmagtgtctgacnatnaccaggtgtccctctcacaggaaacttgtttannctggnaga
hgccctttggctcttgtctgacctgtgtccaatttattcctaccaagatagccactccctaggagagccc
tgaccggaagaaagntaggtttgggtgygytggtcaggtgagacacagagraggcagcacaacaaaacac
atgaaataacagaagcaktttattactyacaratccacagagangagngtccctgcaaggaaactgcggg
aagtctggagacggcggggagcwcaagaggacagcatgcctcacagggncaataggaagtaggggagctn
tttgggacatgtangttcaaccagcaggtggggargaagagagagagagagagagagacctgtgggccaa
agcctttattggggtccagggyrttacccaagcaggtttccyrtggggagttctaattggtgggtttara
rgragcaggcayragttccatgrrgtcacactgtgactgagaggtggtcactgtggcatacctgcacagt
ccatgtrgggtgtgrgggtcagtggggtgagtcaannaggctgyatgtagctgtccyrtagggaagtggy
cacyrggaggyrgttgtataaggcagatatctggatcgacyrcmttgaggaactgggaggaagaggyrga
gaactggaaaccgcgkcaagggtgactaagccctgcttytggtatgagaaagyyaaacctatattcaraa
tgcatgccgagrcaacataactctataagnatbcactaca
>MER64A|MER64A  Primate MER64A repetitive element - a consensus.
cagcggttctcaaactttttggtctcaggacccctttatactcttaaaaattattgaggaccccaaagag
cttttgtttatgtgggttatatctattgatatttaccgtattagaaattaaaactgagaaatttttaaaa
tatttattwattcatttwaaaataataaacccattacatgttaacataaataacatttttatgaaaaata
accgtattttccaaaacaaaaaaatttagtgagaagartggcattgttttacatttttgcaaatctcttt
aatgtctggcttaatagaagacagctggattctcatatctgcttctacattcagtctgttgtgacatcac
acaycatgaagcctctggaaaactccactatacactcgtgagagaatgagagtgaaaaaggcaaataaca
tcttagtattattatgaaaatagttttgacctcgcggaccccctgaaagggtctcggggaccctcagggg
tccgcggaccacactttgagaaccgctg
>L1M6_5|L1M6_5  5'-end of LINE1 repetitive element, L1M6_5 - a consensus.
aaaaatawraagggagacttctrcttccaggaagatggagtagacatacttttccctattcctcccacta
agtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaaga
aggcagactggctagggacctcaggacctgaggaataacacagtggtgagttccctgggttttctttttg
cctcatatatcccagacttggagctgaagaagctggcaacccrgaaacaccaacaggcacagacaaaaaa
aacccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaactt
ttagacaataactrctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacacca
gcaaaggccaagtggggagcctagactttcaccctcaccaggctgtaacaaggaacccaacccaccacca
ggatggtgtcagagaaggccaagtagggagytgggactttnttgtgaagctgggactttcatccccacca
ggtagtaatgaggatcaccctcccccaacccccctgcggtgtcagtgtgagagrccawgtggggagcctg
gacttccacccccacccagcagtaatgargcatccctcccctccccactggggtggtgtcagaggaggcc
tagtggagagtcaggactttyatcaccgcccagtggtaatgargccacctcctcctcttgcccccatggt
gtcagtggaggccatgtggggarcagtaatgaggcaytcctmyccctcccagccagggaggtatcagtgg
aggcctagtggggagccagaactcccacccccacccagcagtaacaaggagcccctctcccaacayttca
ggtgtcaatggaggccaagtggggaacctggacttctacccccacctggcagtaatgaggcagttmccct
ccttcccctgctagagtggtgtcagaggaagccagctaaaacagaagatttaaataagatccagagtctc
ataacataatacccaaaatgtccaggtttcaatcaaaaattacttgtcatacaaagaaccaggaaaatct
caaaattgaatgagaaaagacaatcaatagataccaacaccaagatgacacagatgttagaattatctga
caaagattttaaagcagccattataaaaatgcttcaaaaagcaattataaacatacttgaaacaaataaa
aaatagcagcaaanaaatagaaagtctcagcaaagaaatagaaaatataaaraagaaccaaatggaaatt
ttagaactgaaaaatacaataactgaaataaaaaaytcaatggatgggctcaacagcagaatggagagaa
cagaagaaaagaatcagtgaacttgaagatagaacaatagaaattacccaatctgaacaacagagagaaa
atagattgraaaaaaaaatgaacagagcctcarggacctgtgggactacaacaaaagatctaacattnat
gtaattggagtcccagaaggagaggagaaagagrrtagtatttgaagaaataatggctgaaaatttccca
aatttggca
>MER11A|MER11A  a consensus.
aggtgttgcgggaagtcagggaccccgaatgragggaccggctgragccatggcagargaacgtrrattg
tgaagatttcatggacatttatcggttcccaaattaatacttttataatttcttatgcctgtctttactt
taatctcttaatcctgttatcttcgtaagctgaggatgtatgtcacctcaggaccactgtgataattgtg
ttaactgtacaaattgattgtaaaacgtgtgtttgaacaatatgaaatcagtgcaccttgaaaaagaaca
gaataacagcratttttagggaacaagggaagacaaccataaggtctgactgcctgcagggtcgggcaaa
aagagccatatttttcttcttgcagagagcctataaatggacatgcaagtagggaagatatcgctaaatt
cttttcctagcaaggaatattaatattaataccctgggaaaggaatgcattcctggggggaggtctataa
acggccgctctgggaatgtctgtcttatgtggttgagataaggactgagatacgccctggtctcctgcag
taccctcaggcttactagggtggggaaaaactccaccctggtaaatttgtggtcagaccggttctctgct
ctcgaaccctgttttctgttgtttaagatgtttatcaagataatatgtgcaccgctgaacatagaccctt
atcagtagttctgtttttgccctttgccttgtgatctttgttggacccttatcagtggttctgcttttgc
cctttgtcctgttccctcagaagcatgtgatctttgttagacccttattagtagttctgctttttgccct
ttgaagcatgtgatctttgtacccactccctgttcttacaccccctccccttttgaaacccttaataaaa
aacttgctggtttgaggctcaggtgggcatcacagtcctaccgatatgtgatgtcacccccggcggccca
gctgtaaaattcctctctttatactgtctctctttatttctcagccggccgacacttagggaaaatagaa
agaacctacgttgaaatattgggggcgggttcccccgatactaattntctt
>MER11B|MER11B  a consensus.
tgcaagtagggaagatatcgctaaattcttttcccagcaaggaatattaataattaatagccctgggaaa
agaatgcattcctagggggaggtctctraaatggccgctctgggaatgtctgtcttatgtggttgtagat
aagggatgaaatacgccctggtctcctgcagcacccccaggcttactaggatggtgggaaattccagcct
ggtaaattttagtcagaccggttctctgctctcgaaccctgtctcctgttaagatgttatcaatgataat
gcgtgcccgaaacctcattagcaattttaatttcgcctccatccctgtggtcctgtgatctcgccctgcc
tccatttgccttgtgatattttattgccctgtgaagtatgtgatctctgtgacccacaccctgttcgtac
actccctccccttttaaaatccctaataaaaacttgctggtttgacggctcggggggcatcacggaacct
accgacatgtgatgtctcccccggacgcccagctttaaaatttctctcttttgtactctktccctttatt
tctcagrccggccgacacttagggaaaatagaaaagaacctacgtgaaatattggggctggttcccccga
tactaattntctt
>MER49|MER49  Medium reiteration sequence MER49; LTR-like sequence.
ggaaaggagactttatttcttgactaaagggttgacagcctgcaaggtggccatcccgcaggctgggaag
cgcagcctctggccaagaccagagacaggcacttcgggaggaggaggggttggggcaggagctttatgct
gaacgggttggctaaacatacatattcaacaggttacaggaggagctatgaatattcatgaaggtggtcc
tgacgcatgcgtattgaacaaacatgcatgtaacatacgacccatgttcactttggggtggagacttaac
atttaaatgtattacaattaggccctatacgtcaaaaggtcttttcaggacacgaaggcgtgaatgtact
htctgtaaactrgccagaaccagtccatggcccggtggtccycttatcwggagaaagttactgaaatcag
tctcttgtccaatcaaagctgtagttatggctggtggaacaggggytcagttagtcagcgtctggtgtga
gctgcaattgttttaatattgcttatctcaaggccggtgcttgtttagctgttagagaaaaagaaaaacc
ttgtggcagtragaatatagyttaytctttaagtgtaggnatgcgtgacttaacccttgcctggcatggc
cttaggtcctgtttataatttggtatcttattgccacaaarwktcmrttmtrtyagymttaatgaymtmt
attttwacattaaykwtgrtyagttrttktrtctaaayyryaaaagggagrgggtataatgaggcgtrtc
tgacytmscatccymtyayagccwgraactmagtttttaaggtttytctggngtccccttggccaagagg
gggtccgttcagtcggcggggggctaagattttatttttagttkacawtctmmatttkgccaaga
>MER46|MER46  transposon - a consensus.
caggttgagtatcccttatccaaaatgcttgggaccagaagtgtttcggatttcggatttttggattttg
gaatatttgcattatacttaccggttgagcatcccaaatctgaaaatccgaaatccaaaacgctccaatg
agcatttcctttgagcgtcatgtcggcgctcaaaaagtttcggattttggagcatttcggatttcggatt
ttcggatttgggatgctcaacctg
>THE1B|THE1B  a consensus.
tgatatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacgtgtcg
tgggagggacccggtgggaggtaattgaatcatgggggcgggtctttcccgtgctgttctcgtgatagtg
aataagtctcacgagatctgatggttttataaaggggagttyccctgcacangctctcttgcctgccgcc
atgtaagacgtgmctttgctcctccttcgccttcygccatgattgtgaggcctccccagccatgtggaac
tgtgagtccattaaacctctttyctttataaattacccagtctcgggtatgtctttattagcagcatgag
aacggactaataca
>MSTA|MSTA  a consensus.
tgatatggtttggatctgtgtccccacccaaatctcatgttgaattgtaatccccaatgttggaggtggg
gcctggtgggaggtgattggatcatgggggcggattyctcatgaatggtttagcaccatccccttggtgc
tgtyctcgtgatagtgagtgagttctcatgagatctggtcgtttaaaagtgtgtggcacctcccycctct
ctctcttgctcctgctctcgccatgtgacgtgcctgctcccccttcgccttccgccatgattgnaagctt
cctgaggcytccccagaagccgagcagatgccagcgccatgcttcctgtacagcctgcagaaccgtgagc
caattaaacctcttttctttataaattacccagtctcaggtatttctttatagcaatgtgagaacagact
aataca
>MSTC|MSTC  a consensus.
tgctacggtttgaatgtttgtcccctccaaaactcatgttgaaacttaatccccaatgtggcagtattga
gagrtggggcctttragaggtgattgggtcatgagggctctgccctcatgaatggattaatggattaacg
tattaatggattaattggttatcacgggagtgggatcggtggctctatcataaaarycattttgnctctc
gnrtgngccccttcttgccctttcacgccttccgccatgttatgacagagcacaaggccctcaccagaaa
ccagatgcagccgccatgatcttggacttcccagcctscagaaccgtgagcaaaataaacctcttttctt
tataaattacccagtctatggtattccgttaaagcagcacgaacggactaagaca
>MLT1A|MLT1A  (MLT1a subfamily) - a consensus.
tgctatggactgaatgtttgtgtccccccaaaattcatatgttgaagccctaatccccaatgtgatggta
ttaggaggtggggcctttgggaggtgattaggattagatgaggtcatgagggcggggccctcataatggg
attagtgcccttataaaagagaccycagagagctcccttgccccttccgccatgtgaggacacagtgaga
aggcgccgtctacgaaccagggaatgagccctcaccagaaactgaatctgccggcgccttgatcttggac
ttcccagcctccagaactgtgagaaataaatttctgttgtttaagctacccagtctatggtattttgtta
tagcagcccgaacagactaagaca
>MLT1B|MLT1B  (MLT1b subfamily) - a consensus.
tgttatgggctgaattgtgtccccccaaaattcatatgttgaagtcctaacccccagtacctcagaatgt
gactgtatttggagatagggtctttaaagaggtaattaagttaaaatgaggtcattagggtgggccctaa
tccaatatgactggtgtccttataagaagaggaaattwggacacagacacgcacagaggraagrccatgt
gargacacagggagaaggcggccatctrcaagccaaggagagaggcctcagaagaaaccaaccctgccgr
caccttgatctcggacttcyagcctccagaactgtgagaaaataaatttctgttgtttaagccacccagt
ctgtggtactttgttacggcagccctagsaaactaataca
>MLT1C|MLT1C  (MLT1c subfamily) - a consensus.
tgttatgggttgaattgtgtccccccaaaattgatatgttgaagtcctaacccctagtacctcagaatgt
gaccttatttggaaatagggtcwttgcagatgtaattagttaagatgaggtcatactggagtagggtggg
ccctaaatccaatatgactggtgtccttataaraagaggaaatttggacacagacacgcacacggggaga
aggccatgtgaagacggaggcagagattggagtgatgcakctacaagccaaggaacgccaargrytgcca
gcaaaccaccagaagctaggaagaggcaaggaacagattctccctcacagccytcagaggarrccagccc
tgccgacaccttsatctcggacttctggcctccagaactgtgagagaatamatttctgttgtttaagcca
cscagtttgtggtactttgttacggcagcccyaggaaactaataca
>MLT1D|MLT1D  (MLT1d subfamily) - a consensus.
tgtggtaggcwgaataatggctccccaaagatgtccacgtcctaatccccagaacctgtgaatatgttac
cttacatggcaaaagggactttgcagatgtgattaagttaaggatcttgagatggggagattatcctgga
ttatccgggtgggcccaatgtaatcacaagggtccttawaagagggaggcagagggtcagagtcagaaga
aggagatgtgacgatggaagcagrragngaaaactcaacgttgctggctttgaagatggaggaaggggcc
atgagccaaggaatgcgggcagcctctagaagctggaaaaggcaaggaaacggattctcccctagagcct
ccagaargaacgcggccctgccgacaccttgattttagcccagtgagacycattttggacttctgacctc
cagaactgtaagataataaatttgtgttgttttaagccactaagtttgtggtaatttgttacagcagcma
yaggaaactaataca
>MLT1E|MLT1E  (MLT1e subfamily) - a consensus.
tgtggtaggcagaattctaaratgmtcccaatgatcctcgcctcctggcgtaatctccttgagtgtgagt
aggacctgtgacttgcttctagccaacggaatatggcaaaggtgatgaratrtcacgtgattacgcgtac
gtgattatgtaasattcagtctttgmcgtcattcttgccgagagactctcctsctggtyttgaagaagta
agctgccacgtcatgagnnnncnnannagarygccgcaaggcaagggnntctagagctgagagtcgccct
tactgatgggcagcaagaagcaagccacctcagtcctacagccgcaaagaactgaattctgccaacaacc
tagtgagcttggaagcagatcctgcccagtcgagcctccagatgagancgcagccctggctgacgccttg
actgcagccttgntagaccttgagcagaggacccagctaagccgtgcccagactcctgacccacagaaac
tgtgagataataaatgtgtgttgttttaagccgctaagtttgtggtaatttgttacgcagcaatagaaaa
ctaacaca
>MLT1F|MLT1F  (MLT1f subfamily) - a consensus.
tgtggtagccagcctccaagatggcccccaatgatccctgctcctggtattcacayccttgtatggtcyc
ytcctacattgaryyagggctrgtctgtgtgaccaatagaatagggcagaagtgatggcgtgtsacttcc
aagaytargtcayaaawaacactgtggyttctgcyttgntctcttcgggctactcactctgggggaagcc
agctgccatgctatgaagacactcaagcagcctatggagaagtccacgtggsaaggaactgaggtctcct
gccaacagccagcttcgacytgccagccatgtgagtgagccatcttggaagcggatcctccagccccagt
yaagccttcagatgactgcagccccggctgacatcttgactgcaacctcatgagagaccctgagccagaa
ctacccagctaagctgctcctarattcctgacccacagaaactgtgagataataaatgtttrttgtttta
agccactaagttttggggtaatttgttacgcagcaatagataactaataca
>THE1BR|THE1BR  THE-1B Mammalian LTR retrotransposon internal sequence - a consensus.
gtaaattggtaccagtagagtggggcgctgctgaaaagatacccgaaaatgtggaagcgactttggaact
gggtaacaggcagaggttggaacagtttggagggctcagaagaagacaggaaaatgtgggaaagtttgga
acttcctagagacttgttgaatggctttgaccaaaatgctgatagtgatatggacaataaagtccaggct
gaggtggtctcagatggagatgaggaacttgttgggaactggagcaaaggtgactcttgttatgttttag
caaagagactggcggcattttgcccctgccctagagatttgtggaactttgaacttgagagagatgattt
agggtatctggcggaagaaatttctaagcagcaaagcgttcaagaggtgacttgggtgctgttaaaggca
ttcagttttaaaagggaagcagagcataaaagttcggaaaatttgcagcctgacaatgcgatagaaaaga
aaatcccattttctgaggagaaattcaagccggctgcagaaatttgcataagtaacgaggagccgaatgt
taatccccaagacaatggggaaaatgtctccagggcatgtcagagatcttcgcggcagcccctcccatca
caggcccggaggcctaggaggaaaaaatggtttcgtgggccaggcccagggtccccgtgctgtgtgcagc
ctagggacttggtgccctgcgtcccagccgctccagccatggctaaaaggggccaacgtacagctcgggc
cgtggcttcagagggtgcaagccccaagccttggcagcttccacgtggtgttgagcctgcgggtgcacag
aagtcaagaattgaggtttgggaacctccgcctagatttcagaggatgtatggaaacgcctggatgtcca
ggcagaagtttgctgcaggggcggggccctcatggagaacctctgctagggcagtgcggaagggaaatgt
ggggtcggagcccccacacagagtccctactggggcactgcctagtggagctgtgagaagagggccaccg
tcctccagaccccagaatggtagatccaccgacagcttgcaccgtgcgcctggaaaagccgcagacactc
aacgccagcccgtgaaagcagccaggagggaggctgtaccctgcaaagccacaggggcggagctgcccaa
gaccatgggaacccacctcttgcatcagcgtgacctggatgtgagacatggagtcaaaggagatcatttt
ggagctttaagatttgactgccccgctggatttcggacttgcatggggcctgtagcccctttgttttggc
caatttctcccatttggaatggctgtatttacccaatgcctgtacccccattgtatctaggaagtaacta
acttgcttttgattttacaggctcataggcggaagggacttgccttgtctcagatgagactttggactgt
ggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggttttga
aatgtgaggacatgagatttgggaggggccaggggcggaa
>MSTAR|MSTAR  MSTa-Mammalian LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>MLT1R|MLT1R  MLT1-Mammalian LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MLT2A1|MLT2A1  Interspersed repeat MLT2A1 - a consensus.
tgtgatggttaatactgagtgtcaacttgattggattgaaggatacaaagtattgatcctgggtgtgtct
gtgagggtgttgccaaaggaggttaacattggactcagtgggctggggagaggcagacccacccttaatc
tgrgtgggcgcmatcyaatcagctgccagcgtggctagaatataaagcaggcagaaaaatgtgaaaagag
agactggcctagcctcccagcctacatctttctcccgtgctggatgcttcctgcccttgaacatcagact
ccaagttcttcagttttgggactcggactggctctccttgctcctcagcttgcagacggcctattgtggg
accttgtgatcgtgtgagttaatacttaataaactcccctttatatatatctattcyattagttctgtcc
ctctagagaaccctgactaataca
>MLT2B2|MLT2B2  Interspersed repeat MLT2B2 - a consensus.
tgtgatggttaattttatgtgtcaacttgactgggctaargggtgcccagatagctggttaaacattatt
tctgggtgtgtctgtgagggtgtttccagatgagattagcatttgaatcagcggactgagtaaagaagat
tgccctcaccaatgtgggcgggcatcatccaatccgttgagggcctgratagaacaaaaaggcagaggaa
gggtgaatttgctctctctccttgagctgggacatccatcttctcctgcccttggacattagaactccag
gttctcgggccttcggactycgggacttgcaccagcagccccccagattctcaggccttcggactcggac
tgaryyacgccaccggcttccctggttctccagcttgcagacggcatatcgtgggacttctcagcctcca
taatcacgtgagccaattcccctaataaatcycytctatccatcctattggttctgtctctctggagaac
cctgactaataca
>MLT2C2|MLT2C2  Interspersed repeat MLT2C2 - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacaycagtct
agatgttgctgtgaaggtattttrtagatgtgattaacatttayagtcagttgactttaagtaaaggaga
ttaccctccataatgtgggtgggcctcatccaatcagttgaaggccttaagagcaaagactgaggtttcc
cgaggaagaagaaattctgcctcaagactgcaacgtggaaatcctgctgntttwccagcctccaagcctt
cggactcgaactgcaacatcarctcttscctgggtctccagcctgccggcctaccctgcagatttcggac
ttgccagcctccacaatcgcgtgagccaattccttaaaataaatctctctctacacacaccctattggtt
ctgtttctctggagaaccctgactaataca
>MLT2D|MLT2D  Interspersed repeat MLT2D - a consensus.
tgtgatagttaattttatgtgtcaacttggctaggctatggtgtccagacgtttggtcaaacattagtct
gggtgtttctgtgaaggttattttttggatgagattaacatttaaatcggtagactgagtaaagcagatt
accctccctaatgtgggtggacctcatctaatcagttgaaggcctgaatggaaaaaaagggctgaccctc
ccccaagtaagaggaaattctgcctgcctgatngtcttcgaactggaatatcagctctgcggattttgga
cttgccagcctccataattgcatgagccaattccttataataaatctatctactctctctacacacaccc
tattggttctgtttctctggagaaccctgactaataca
>MER4A|MER4A  a consensus.
tgtgaaaggaaaataaatctcgggrccccmaaatcactaagccaaagggaaaagtcaagctgggaactgc
gtyaggcaaacctgcctcccattttattcctaaataagatagctacaaagataaaaggctacatacctct
ctcacaatttycyacaaggaaattccttgcggacctcaagatctttaccctaaaacagttctgytgamyt
tcaccttggcawtgyaaatggrtacaggacaaaggtacagaactgaaagtcatccctctgctcacctgag
acaaatgcatatctgattgcttcctctgccctattgtttatgtaaaaatgcagattcactgagccagact
maattgtgtattcagtgaaargctgatcarrgactcaaaagaatgmagccwtttgtctcttatctaccta
tgacctggaagcccctrcttcgagttgtcccgcctttccagaccgaaccaatgtacatcttacatatatt
gattgatgtctcatgtctccctaaaatgtataaaascaagctgtrccccgaccaccttgggcacatgtcg
tcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaaataaactttctaaattgaytg
agacctgtctcagatacttttgggttcaca
>MER4B|MER4B  a consensus.
tgtaaaccaaaaataaaattctaagkcccccaaccgtctgaatggacycctcctctyggccaagggcayt
ccaaagytaacctgraaaactagttcaggccatgatgggaagtgggggtcggacacgcctcattataccy
tccyycttctggaattcaggcacaactgaccagcattaacatcaacacagacnttaagtctgataagaaa
cagtttacaayctrttctctctgaagcctgctanctgaargcttcatctgcacgataaaacttggtctcc
gcaaccccttatntcataacccggacattcctttccattgatctyaantcttcaaccarttgccaatcag
aaaatctttgaatctacctatgacctggaagcccccgcttcgagttgtcccgcctttccggaccgaacca
atgtacatcttacatgtatttgattgatgcctcatgtctccctaaaatgtataaaascaagctgtrcccc
gaccaccttgggcacatgtkgtcaggacctcctgaggctgtgtcacgggtgcgtccttaaccttggcaaa
ataaactttctaaattgaytgagacctgtctcagatacttttgggttcaca
>MER4C|MER4C  a consensus.
tgtgaaaggaaaataaaaacttgggaccccaattcactatgccaaaaggaaaaaattaagctgaaagctg
agtcatgcaagaaactgcctttccttttgttcctaagcagatagctacagataaaaggttaaatatctcc
acaggtagctactctatgttcaccttatcttatgtaaagtgccgatttactgagcacgagacgaatacat
aattgactattcccctacctgctccttttctcttgcaacatgtggattcagtaatgtgaccataccctcc
ctctttcccctccagcccgcttttcccctttaaatattgaagccctcaaaatcatctttggagaaaggca
cagaccacagatgtttctgtgatttcgtgtttctttctcccgggcatgtccttaaccttggcaaaataaa
cttctaaattgattgagacctgtctcagatactttttggtttaca
>MER9|MER9  a consensus.
tgttgggaacaggcccccccaaatctggccataaactggccccaaaactggccataaacaaaatctctgc
agcactgtgacatgttcatgatggccntaacgcccacgctggaaggttgtgggtttactggaatgaggac
aaggaacacctggcccacccaggtcggaaaaccgcttaaaggcgttcttaaaccatgaacaatagcatga
gcaatctgtgccttaagggcatgttcctgctgcagataactagccagacccaccccttcatttcggccca
tcccttcttttcccataagggatacttttagttaatcgagtatctatagaaacaatgctaatgactggct
tgctgttaataaatacatgggtaatctctgtttggggctctcagctctgaaggctgtgaggccctgattt
cccactttacacctctatatttctgtgtgtgtgtctttaattcctctagtgccactgggttaggctgtcc
ccagtcgagctggtctcgca
>MER39|MER39  a consensus.
gggcattannnctgtaggggcagaaaggtgtgatnccttccctacccatcataagggtcacggcnnacac
tcctataataaaanayaggttagcaagagaaaagcataayagatttatttaatcaaagttttatgtgaca
tgrgagccttcagaaatgaagacmcaaakactcagggaaaactctatttttatgyttagatttgatgaag
aatgganagctgcgcagaaatgtgattrgacaaaaggggwatgatctaatggtmataractgrgtgtggr
aacccagcaaggcttgtctgttcgtattcttcttggtctmtctgtgcggcattccttcctcccgggtata
gggcgggaccccttctggaatgagggtcttatgacctacwatcagacgagataggtcagawaatttcttt
acggscagcycyaagacagaaaggcgggkrawgattagagggcnagagaaggtcagaaaatgannttctg
tttyctgaggnctgcttctgaggcttagagcgccccaacattntaacaaaagnctgtccntcacctttac
cgctctgaagctgttccaaagctgctacatgaaccaaggacaaaaagccanatanttcaacaaaagatat
ncttatngttttagtcactcaggaaacagcaaggcttataggagctgagaacccggaattatg
>MER48|MER48  Retrovirus-like element - a consensus.
tgwaagattctccccrgggcctgaaagcttraggggatgartaacccctcccttcctcaggcccagtccc
aaggcgcaaggtcacttgtgccagcagtgtgcgccagcaagatagcagaagcaggaagagagccggccgg
aagacacgtacccccgaagatcgagaaagaggccatccgggtacaacgtagcagttacgtcagactggga
cacttcctgtttacaggagactataaaaccyytgccccgtcctcacttggggctgacgccattttaggcc
tcagcccgcctgcactcaggcagcacccaggcgctcattaaaacagcgtgttgctccacacctcctcgtg
ttgttgtggacgcgctctcggggttsgaaccgayacaagarccttaca
>MER52|MER52  a consensus.
tgganntcatagtgttacgggatccttggggtgtcgcttttccggccggaaacctctgtggccagtggcg
cctttgcctgagttttgcttgggcccgctgggctcgttccgcccactcggcctggcaggctgcgctcggc
tcacgctaccggcctggatcccatgcctgccaagggcgagtcaggcgcggarcagngaggggtgtgtgag
cgagcgtggggtccggccactgngcacagtcagacatgccggctgctgcagtggggcgggcagctccagg
cgccggcacaggcgccggctctccgcgaggctgcggctggaccaggcacaccgcaagcagcttccacagc
tggcaccggggaacgcagtggcgcccagaagcttggagacgccaggaaccgcagggccccaaagagggag
tcacagccctggctcggggagctcccaggtctgggctcccmgaagggccacagctcttctctccttctnt
tcgcccgcaacatggcgagcagggggcgtgtttcagccctgtttgtgttacagctctttyagccccgcca
ttcggtgggtcccgagttcttgtcctgcgwccaggaagaatgaggtacacagacaagtggagggtgagca
agacgaagaggagctttattgagcgacagaacagctcagaggagacccgmagtgggtagctcctctccgc
aggcaggtcgtcccgwcaagtgttcagctctcagcagagaggagaccctggagtgggtagctcctctctg
caggcaggtcgtcccgwcgagtgttcagctctcagcagagaggagaccccggagtgggtagctcctctcc
gcargcwggttgtcccgtcgtctgctcgagtctggctgagcctggggcttttatgggcctcagaggggag
gaagtgcatgccgattggtccatgggtggccatgggtgggcccagaaaaagcaccacaagttcccactcc
ggtccgcaggactggcagnncccnctcccagccttcaggcnntccctggcttgaaggtggggcctcactg
gggacccgcccctttctgcccaggagcctgtctgcctcctgccgccgttcatggtgcccgggctgttcgt
gccgaggggcgcctgcaggccagcgccgagctgccctcagccccgccttggcctccctcccatgctcntc
ggcgtccaaagtctggagggggctgaggcggcagggggctggtgtgtcagcnctgcctcgagcgtgcgca
catctggctgggctgcggcagcgcccaggctcagcctcgactttgctccaagatcggagcgggtgccggg
agcagagagaggccaggcagtgggagcaggcacttctgagcctgcggagcgggcgccgggagnaaggaga
ggccaggcagtgggagcaggcatttccaagcctgtgggggcaggggggccttccccggcccccaagagca
cagagatgcccgggtccacagccgcggcttgggcggctgcagctgcacccgggagggtggggctcccgcc
tgcccccggcccccaagagcacagggangcccgggtccgcagccgcggtttgggcggctgcagctgcacc
tggggagctcctgccccaactcggaaggggcggggctcccgccggcttcgtggagcgcgcagccccggcc
atgcctccctgctgcagccggcgtaatggcagcggccactccagatgggccgccgctgccatcantakgt

>R66|R66  A 66bp tandem repeat - a consensus.
acagagtgctgattggtgcrtttacaaacctttagctagacacagagcgctgattggtgcgttttt
>MER4I|MER4I  MER41I, MER57I and MER65I retroelements.
tggtaaccatggaagggattctgagtggagatgcccctgacctttgacaaatctcctatcggtgcttggt
accagcatgagctaactttatggcycaagctcaarwtrtctttatkgctcaaaccaataggacaatttgc
tgaggtctgrgagcatctccctccagagaatccctgatctcccaaaatttggtcgagatctaargtttat
tttgctgtacaactcctctttttttggagttttacttgcttccaacacaaggaaggcgagtttttcctgc
ttccatgatgatggaaggcaggtaactcctttmtggagtttsagctcgcttccaacagggaagrtgagtt
ttttttcctgcttctaggatggtagagagcagtcttcagcctgagacccattcctaggtaagtaactgaa
ttggggtttgtcttggaaattctccttcttggctaaaagttaagattaacaatcttggaaattctcctta
argactaaaagttaagattaacaaccagctggtcttaatttctccttaccattagagcgctcagtaatca
tataagttgtgcgatcatttgttttgcttaactgcttytgtttttgttgtttttgtttgtttctgttttt
gttgttgtttcwgtctttttcctattgggtttgaccaactctatccgacttgatcagtgtggtgggggga
gaaaaacggccagcaaaaggaaaaaattgancttgtttactttgactactaaatctgaaggagaattcca
aattatggggaacaaggcctctgaagtggctaaattcccacaaaaaaaaaaaaaaamaaaaaaaaaacaa
ggcyagctttttgctagccaggccaaactgaaagagcaatggctgtcaccycacgctgcagttcwatagc
taaggtyctgcnttttttttttttttcaccgtgacagcctgggtttggttcytaaatcaagccctttctg
gtttgatasttggtacttctgaaatagcagcwgtttgtcctagctaaaatatggtaatgagatttkaaag
gatttttttaaaggagctcaatggttaaaagtcagcttaattaaaaggctaacatccaagatgtatgtgt
gtatgtgtgcgtgtgtatgtgtgcatgtgtgcgtgtttgtatttaaaaggccttcatgtttttgtttcgt
cgtttgtttttctctcctaagaccttgtctttttttgagcaaagtttttttcttctcagttgactgaatt
ctgttttcttcatttacttttcttccaccctgttcctccttccctttgccatcttykgyaccaagtgaar
rgayctagaraaggcttctaatracttgagaccccttaaagaacwcagaaaaaggtgccacwcacccctt
tttgaggrtaaacttctgtttttccttatgggacctcaaaagtagtaaahagacagattcctctcaggtc
taaagctctgctytcttttgyattgcgttacctgattttttgactaaaatagttattgcaacagaggcta
ctcttgggtttttaaggaagagtgtagtgtagacacttagaaatgtctttgtttaaaaakttaagtrcac
tgtaaaagcatcatrtggyttagyctcatrataattctccctttttrgagacccagcattcagtgtgggc
tctgcccagagctcagtgrtccagttaaaaataggtagtctctatytaaataaaattggtctccttataa
aatcctatgatagatttctataattttatgtttratttggcatcaatytttaatcttcctctagcaccac
cagactttttctctctgtactttaagatgtaaattttgctatytgatttttcacctaagagttgtttcct
ttaatatgcaaatttagggctatttagctgacaactgcctagggtaatgaaacaggttatcaagaatttg
aaagtctaagataggaaaaaaaggrggtcttataaatctataagatgtacttctatcagcatgcctaata
cgtctatgtatttatgtgttgtgtacacaatgtttcactactaaaaatatataaaagagctctaattaat
tggcttaaagaaaaataaaagtgcttaaatcaaatactttatcaggaaaaaagaaaagactagtcaaatg
ctttttcaagttyatgaaatgctttttcaagtttatgtaacttaagtaaaatctttaataaataagctag
ctttaaaattattggtaaagtaatattagaaatgtcttaagaattgccagcatacatttttgtttgcatt
atattaatcaagcartttcatacttatccctgccaaatactataaaggtgtcaaaatttggcataggggt
tayaaaactataaacccagcccaaaacagaatgatctttgcttgtgtaatttttaataaataagacattg
atattggtttaatgaaaayagctrcatcttgaatttagtaagattaccataacttctaaccttgtggctt
taggcgrty*tttaaatgatgactatcgcagttttcataaataatctaggtaaacaattaataaaataat
taggtaaatgtaatgggataaatacttgtagacaaacttgtcataatttagaatataaagttatattaaa
ttaaataatagatawttwattatttgrgtattttccaataaaaatatattgtaggaaaacattcttkctt
aaaaaaaagtgtgtcctttttaaaaaaatggtgaataagttttgtctaattcaaagcttatttaaaggtt
atrtataaaacaaggtaaaaggaaccaggaaataaaaaaaatgtaaagaaagttataaaaataaagaggt
attttttgnargtaaaaaagctgaaaragaaataattttatatgagaaagaatcttatatggtaaattta
tgagaaagaatcttgtatggtaaatttttgtcctaaaataaaatgactggtttttaagaaagaggwtgtt
taggacaaatcagaaagtccaagcatgttatwaatggtctgtgtaagtcataataaggtttgcataaaga
gaaattaaaaaawtttatatgattaagttggctataattaaaagraaattatttataatagtctttctag
agattgakgtttgatattaaaaatacactaatacactaaaaattkgttagaaaaacaaaattttcttaaa
gtattgatttaytcataaaattacaagagattttaattttaatccaaaaattcaacttttattgcatctc
actgttttcaagctttttctcctctttgagaaggcctgagataataactctctccttcaacttttttgtc
agctcctgtaattttttcctchggttctaactgytgttgtggcctgatgctaaaaatgttttatyttaaa
ggtctaaaagmaatgttttcttccaatataacattctgtactckkcttttcttgatgtgtctgaattgtt
ccatgaaaccagaaaacttcactcataaccctggayacactcttccttgtctaattaattcaagtactat
tttcatcagtttgacttcaggttatctaaagggcttcccataaggagaagcaatcacactgcagaaggtt
tttcttttsctttttggtaactggcctaagaaaaagattttatgttttatcaagataatttttgtgttat
tattattaagtttttgatttgcttaggaaaactgagattaaaattttttaaattaaggttattacatcca
tgtatctttctgtattgcttttaaagtccttgtgacattgagttacagggctttaactcctgggtctaaa
aaggacaccaagtcctgctaaatcttaaacactgacagcaattaaagccycatcttcaggcccgtagaag
atgccaatcaaaataaactgcattcctgagacacaggaaattaaagctattcaactcctcaaggcccagg
gactatccagaagaggtgggcacgtgagattgtaagggccaattttgaaagataaaataagttcaragtt
tctctataaattaatcattaaaagtttctctataaattaatcattrawatcaaaggcacactgatgcaag
accagcatatgggcccctgtgtcagattaacaaggttttcttgaagcattaacckactccttaataaagg
ttgtaaaggttataaaaggcttatgraaattatatcttatggtcaagattaaaattttatagattgttta
taaaattttgaaaaacaaatttaattggcttcatgctgtttttattagggcttattgtttggaaaattaa
gtctcctctctcaaagaatgaaggtttttgccttttttgaaatccttgagttatcactttggttaaatga
atgacttattttacaatgacctgtgattctattttgtgatatcaagtgttttaaacctttgatatttgac
aaactttccaaaatcaaattataaattatgtctttctgacctaattaatcctttaagatattaggttcct
taaagtccaaaaatgacataatttggcttatttggtacaaaaattatayaggaagcattgtcaaatatga
aaaatgtttaancytctttgggttrtatttgtataaatatgttattggtatatgttccaaaattatatga
aactcctataattctgatatrtcttagtgtatattatcartaataattataattattatgttaaattatt
gtatgccacagargtaaccaaatttcctcgtcaattgtgtctttaactatggctgttctaagacttttgt
catccacggacaattgttttattttgrtcctytttaaaaggtagtttataatcagctatagractctaac
aagcgctcttaaatrcaggtttctgataactttggagattgtgacatcggaatagaggaaaaactttcag
gactcatggararctaatgtgttcatgaggattgctaacccaacatcgagcaagcagaacaggaattaac
tgcatggactgaaccaatagaagabtgaaadaatctttttgactttttgcttaaaacgttgctgatcctt
tgttttgtttttcagagtcaagaaaacttttcttttgagctatttacagcttttaacaattgagtatagt
atactcctatgaacaaaatttggagcatatttgtttctctctacctgatttctccagaatttggaaacta
tttgtgagtattcttaacttatggcaatacagttatttgcataagtgcaataagaatctgttttcatttg
taacaggacacaattggagaaactggttattttaccaaggctttgactggaatggtgtactttcctttaa
ggaatcaaacttgacttatggagccaataaaagcccttggaaaaactggcctcataccttgtbtacgcag
tccctgtacaaggtttctgacctgtggtaagtaaagaatgtcactttctgacaggcccaggagccccarg
tttatcttggaacctcaagaggagaggaaattcacccaattcataggtatttgawggcgcaaatccatgg
ctgggctcggctttaaaaaagtcttatctgagattccttctatggaaaaaagttccakcaaagccaattt
aaaaagagcctatataamaaatmattattcttgctgcactttatgcaaataatcaggccaagtataataa
gastaaaacttattttrhaaacaaattggtcctaccatgatttgtctttagtaaaaatgggaaactggag
agagaaaaattatgtttcaaaaactatagtatacctgttattagattctagttgtttttcaatttttatt
attttctacagtttggactgaattctaaattttttcctggctacaagtctccaaaataatgttttcaata
ctttttctttttttccttccwtttttcccatttttcctaatttaaaatcactraaaactaaagctgtgct
tktcttaaagccctgcaaactgaarctagacaacttaaacttcagaagaaaataatagcaacctatttac
atacataagccactttcatacctgcctactgatgtatngacttcagagtaatgtgrcctrtrtcaatttt
ccaggattgttcttttgtttgttgttgtttttctcccttcctcctcctattttstcttcataggacatga
gacttcacaacctgctaaaaatragctttcctaawawctcgggacctacccgtctaggaataaactatcc
tagccacgagagatcagacgaaacctgagaccagagactcattttcttctaaaatgctttctccaaaaga
ttttagaaaagaagggaa
>MER49|MER49  Medium reiteration sequence MER49; LTR-like sequence.
tgtaaactaaaaataaaatcttaagccccccgccgactgaacggaccccctcttggccaaggggacccca
gagaaaccttaaaaactgagttcccggccatgacgggatgggaggtcagacacgcctcattataccccct
cccttttgtggtttagacacaacaactgaccagcattaatgttaaaatagagatcataagactgacagaa
cggactctttgtggcaataagataccaaattataaacaggacctaaggccatgccaggcaagggttaagt
cacgcacccctacacttaaagaataaactatgttctaactgccacaaggtttttctttttctctaacagc
taaacaagcactggcctcgagataagcaatattaaaacaattgcagctcatccascaccagacgctgact
aactgaccccctgttccaccagccataactacagctttgattggacaagagactgatttcagtaactttc
tcctgataagagaccaccggccatggactggttctggccagtttacagaggctgtgcacttgcacgcctt
cgtgtcctgaaaasaccttttgacgtatagggcctaattgtaatacatttaaatgttaagtctccacccc
aaagtgaacatgggtcgtatgttacatgcatgtttgttcaatacgcatgcgtcaggaccaccttcatgaa
tattcatagctcctcctgtaacctgttgaatatgtatgcttagccaacccgttcagcataaagctcctgc
cccaacccctcctccttcgaagtgcctgtctctggtcttggccagaggctacgcttcccagcctgcggga
tggccaccttgcaggctgtaaccctttataagaaataaagtctcctttccaaatttatagatctcgtgat
ttttcagttgaca
>MER4D|MER4D  MER4D - a consensus.
tgtaaaccaaaaataaaatcctaagccccccaaccgactgaacggatccctctcttggccaaggggaccc
caragaaacctgaaaaactaattcaggccataacgggaagtggggtcagacacgcctcattatagcctcc
tccctttggagttcaggcacaactgaccagcattaacattaaaacagagatcataagactgacaaaacag
actntttgtagcaataagataccacgaggacgaagytctkatttttttatcttgcccaaattcctatgta
aggggtctagggagtcgcgccttacaaaccatgaattctcattagatgggttttattaaaccctgtatat
cgtgacttaatttccaacctgactctggtatagcatcacatgacagatagcagaccctgaaggaaatcaa
aatattttaccccaaaatatatttctttgacatattttgaaatggccctgcgaagctgtctcttgtgggg
aaaatctgcattctgtagagaatctctttccctttctaggtctttttccctgatccaggggagaataact
gagagtctggcaccttttaaggtctgataagagaaawttaccatctattctctctgaagcctgctacctg
gaggcttcatctrcatgataaaanccttggcctccacaactccccttatcttcactcgattgatttcaay
tctttagacagagcttaactctttcaaccaattgccaaycagaaaatctttgaatccacctatgacctgg
aagcccccgcttcgagttgtcccgcctttcckgrgcgaaccaatgtacaccttacatgtattgatttatg
tctttgcctataagttccgtctccctaaaatgtataaaaccaagctgtancccgaccaccttggrcacat
gttctcaggacctcctgaggctgtcacgggccatggtccttcactttggcaaaataagcctctatttaaa
ttgattaaaatctgtctcggatattttttgctttaca
>MER39B|MER39B  MER39B - a consensus.
aagcagaataatggagaaaagcatatacatttatytaacatgtatacactgtatacacgggagccttcag
aatgaagacccaaagatacagggaaaattgtccatttttatgcttaggttcaacaaagaatggacagccg
tgtagaaatatgactggacaaaaaggcyatgatcyaatgctaatgagctgagtggggaaacccagcaagg
cctgtctgtctagattcttcttggcttctctgagcacgcattccttccggntatagggcggggccctctc
tggaatgggggtcttatgacctacaatcaaacaaggtaggtcagataatttctttatggccagtttttac
acagaaaggtggagggaaagttagagtaatatttttaggttttatggctggctttgsaggaaaggrgttc
tggtttctatgacctgccttggggaagagagattctagtttctatggctagcctcggggaggggagaatg
ggactgagagacaggagggcgggagaaggtcagagaaaaaytttgcttctgaggccttcattttgcggta
ttgttttctgagccccaacca
>MER61|MER61  MER4I/MER41I/MER57I/MER65I retrovirus-like elements.
tggtagtgagacagccagatgggaaggggtccccggagaaactccaaccggcctgcgcactgggaggart
gcgcactggggtggagccacagaagttcgcgccatttgcagcggggaggagcctggcccctcctcttcct
gggtggaacctgggattcgaactgcgaggcgggaagtscactagcaggaarcacagtctctcrctttgct
gagrgtccctgtttccccttttcttccttttcacysaataaaaycycgycttactcacccttcaaattgt
ctgcaagcctaawttttcgtggccgtgtgacaaggaccccgtctttagctgaactaaggaaaagtcctgc
aaca
>L1PA15_5|L1PA15_5  Primate L1PA15_5 repetitive element - a consensus.
aagatggctgactagatgcagccaggwggaacakctcccactgagggaccaggacatcaggaagactggc
acactcctarcagatcttcagagggaaggcaytgagagtggacggagggaagacacagawgctgggctga
agggggaggaagctgggaaccctgcacggggctaccrmgcaccaggactcgttcctggcccccagtgact
cctggggaakgggtgagttgaacaggcaaggagyracccactctcaccatggacctctggaatcctagca
gsaggagaccccwcgaccmccayrgacacttgagytggcagggagagctgcttagagaagtggtaggggc
agramtccagcctgtgtggagcccagagggtttggtgcaggarcatctgtagtggagcacggccagggay
gcccatcccccaaggctcamcatgctcccataggagactttagcccttagggkaactgtyrgacctgaac
wctgcagggtrgtcttgcccatgagacrgggccagtctgacctgagcaccccttggtctgctggcctctc
cyggggccccagcctggccacacctgcttgcagtgcagcctccaggtgcctcctgggggcccacatcata
gcttctgcactggcagaccatgcctgaccagcagagagctccagcagggcggcccccatggmcacgcacc
agcctgcatgctccctccccacactgcagcttccccatggygctttgcctgcacacattnrcccatggca
actccccacatcactttgctggcacgtgtctgcatrggtggrttttgctttccttgccctgccagygtac
atgtgygagtgcaccctgctgtgccactgctgctggygggagtgcaccccccacccattctcccatacct
sctgactgccattgcagatggagccttggtgggcacagagccagccagccccacccccaccagyrcccyr
cccytgyrctaacactgcccctggagtgaaaccaggcacaagaacagcggatyctccccyaccctgagcg
accactcctgcttgtggggcacagagaaggcacacagacctcacmcagwyctgwgccgaccagcgcttcg
ccccgtgctaacaccaccwccggtgcaancgcawgcacagwcgccggcgrcggcccctcgccgctctgag
ccgttctgccwctgctgccgctgtgaatgcscacagggaggcaggcacccccgcacccgctagtaccccc
nacccccacctaaggcgttgagcgygcaccctgccgtgccgccgctgctgctggcacacgcaagcaagca
tagatcctgctgccaccgccccaaaaaagcactttggctggcaccacccatcggagtgttgtggccagtg
gaccgggaacacctcggncccyccagcgcagcaggttcctaacctcgaggggccagagaacaaagctggg
gacccgrtaccagccccccagagttagagcacacagcccaggagtgctgagctgagccttggncccctaa
aatcttccagaaacgaanccagtcaactgaacccaccttataccacaatcaaacccccaagggcatcaaa
gaagatraaagaaaaaaaaaycatccaaaggacagcaacttcaaagattgaaggaacatcagcccacama
gatgagaaagaaccagtgcaagaactctgrcaactcaaaaagccagartgycttctttcctscaaatgac
tgcaytasttcyycagcaakggttcktaactaggctgaaatggctgaaatgncagaaatggaattcagaa
tatggataggaatgaagatcatcaagattcaggagaamgtcgaaacccaatccaaggaakctaaggaatc
acaataaaacgatayaggagctgamagacaaaatggccaktwtaraaaagaaccwaactgatytgataga
gctgaaaaacwcgctacgagaatttcataata
>MER31|MER31  a consensus.
tggtgacaaagactctctccttgaccaaactttagtcaggctcctctgagccctcttctcaactaagccc
cgaccttgggcyctgtccttggcctgcwnagtccagttttagcaagaatcctgctaagtcagtttagaga
gaatcccccaccctcgatatctgatcaggttcctcatcctccgccatcccccaggcgatgtctgatcacc
ctggcctgccttcagcaagaatcctgttaggtcagtttagcmagaatccccctacccctgatgtytcctc
ttagtaattttccatccactgacccccaccctgctccttggctataaatccccacttgtccttgctgtat
tcggagttgagcccaatctctctcccctactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtctgccttaccgtgctttaacaagtgtcgttgaataattttctctgaca
>MER34|MER34  a consensus.
ccatggnagrgaaggaaaaattttwcctctaccctcttagagtttccggctgggcccgataattaaactg
acataagacagattaacaggagaaaagcatacaaatttatttaagtatgttttacatgtacatgggagcc
ctcataaggaaatgaagacccaaagaagcggttagagtcgaacgcttwtatactaggttggacaaagagt
agtaaattgtgaaaacgtgacaagacaaaggggtttgggctagggcggttcatcgtggagaagtgactag
gaagatragrgttagtttaacaaggtttgttcgtacagatttccctcggcctcgactccccgtctctgac
gataagaatgtttccttcctcctggtatagagagaacgtctttcacatgggagttttatctcctgctttc
aggaagaaaagaggaaggtcagagtgctcttcttgcayctgctgtttctcaagtgcctttagctcaaaat
aatccttatgccaaagtggcatattttggggtggcatattctgatctccttcawta
>MER41A|MER41A  Repetitive element MER41; subfamily MER41A.
tgtcagagacgtgtgaaccagagcaactccatcttgaataggagctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctacactcccaccagcaccatgacagtttacaaatgc
catggcaacgtcaggaagttaccctatatggtctaaaaaggggaggcatgaataatccaccccttgttta
gcatatcatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctgtctatggagta
gccattcttttattcctttactttcttaataaacttgctttcactttactctrtggactcgccctgaatt
ctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttgtaaca
>MER41B|MER41B  Repetitive element MER41; subfamily MER41B.
tgtcagaggcgtttgaaccagagcaactccatcttgaataggcgctgggtaaaatraggctgaracctac
tgggctgcattcccagacggttaaggcattctaagtcacaggatgagataggaggtcggcacaagataca
ggtcataaagaccttgctgataaaacaggttgcagtaaagaagccggcyaaaacccaccaaaaccaagat
ggccacgagagtgacctctggtcgtcctcactgctcattatatgytaattataatgcattagcatgctaa
aagacactcccaccagcaccatgacagtttacaaatgccatggcaacgtcaggaagttaccctatatggt
ctaaaaaggggaggaaccctcagttccgggaattgcccgcccctttcctkgaaaaytcatgaataatcca
ccccttgtttagcatataatcaagaaataaccataaaaatrggcaaccagcagccctcggggctgctctg
tctatggagtagccattcttttattcctttactttcttaataaacttgctttcactttactctrtggact
cgccctgaattctttcttgcacragatccaagaaccctctcttggggtctggatcgggacccctttcttg
taaca
>MER41C|MER41C  Repetitive element MER41; subfamily MER41C.
tgtcagaggcgttcgaaccagagcgactccatcttgaatgagggctaggaaaatgaggctgagmcttgct
gggctgcattcccagraagtcaggcattcctaacctctagatgtttacggttaagggaacagattaataa
tgtttactaaacagacccagacttgggagtgtccagatatcccgatatctkgagaacagaggcattccta
atttckctttaaagataataatattgattcttgcaaaakatagtaattaagcaaagatkrrcaatccttt
gtcacaagcccttgtagcagagcacatctcccccgtaatgttctttggctttgttatcctatatataaac
aagcattgtacctagggtggacgcsttcctcctsttgctttcgggaacgccctgctctgtctatggagta
gccgttctttcactmctttactttcttaataaacttgctttyactttacactgtggaatcaccctgaatt
ctttcttgcatgagatccaagaaccctctcttggcggttggatcaggacccctttcttgtaaca
>MER50|MER50  Primate MER50 repetitive element - a consensus.
tgttagagtaggtagctaggcagrcatgagcagggcaggagagggcnccccccacacacaccacgaatgt
cgggtgaccatcaggtgatggtcaggcggttgttaaactgtctctctaaaataataattggtcacagcca
gcgccagggaaargcagtctcctaatagatagaaaacacctgaarctggtgatcagcagcttcccgataa
gatctcaggagttgggcgagtgagctcaagcatgcgcactaagaggcaaaatgrcggagtttaaccggca
tatgaccttcctctaggaacactccaatggtaagggaaraatgcctcaartgagcatgtgcacaactcca
gtaaacacactgtgcatgcggcccytcccaagtgctggcaggccactgcgcacgcggacagcccacccca
aggaaaaatcaagggaggagraacgcaaaccccggaagcatgccgatgtataaaaccccaagtcaaaggt
caaaccgcgcacttggtctctcaagtcgcccgcttggccctcttccaagtgtacttcgcttcctttcgtt
cctgctctaaaactttttaataaacttycactcctgctctaaaacttgcctcggtctctttttctgcctt
atgcccctcagtcgaattctttcttctgaggaggcaagaattgaggttgctgcagacctgtacggattcg
ccgctggtaactcagataccttccaccggtaaca
>MER65A|MER65A  Primate MER65A repetitive element - a consensus.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER65B|MER65B  Primate MER65B repetitive element - a consensus.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacaaggacatttgcctgacaactgt
ctcacraacctagctactgcaagagcctactgtaactctaagattacaaatcctacctagcaactgccga
cactcgccaatcagagctcgccagctcttstaagacgctgctagcgccaatgaactttctttcaaaacaa
yttgtgtaaccttctctttccttaataaaaccctaacatttttctttgttctctggacataccgaaggcc
acctggtctgtgtgtatgccccaaattgcaattctgttcttcacatgttattcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER66A|MER66A  Primate MER66A repetitive element - a consensus.
tgagataggaggtgggactcgactccggaggcggggcttgaactccagaccagattgaagactagctgaa
acagggccagggcaaaagcacctctccataagacacacccaccggtgccawgtgagtttaccattgccat
ggtaacagccagaagttactgcccctttccatggcaatgacccggaagttaccaccccttttctagaaat
ttctgaataacctgctccttaatttgcatgtagttaaaagtgggtataaatatgactgcagaactgcctc
tgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctctgctgctg
ctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctttcctgggc
gaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER66B|MER66B  Primate MER66B repetitive element - a consensus.
tgaggtaggaggtgggactcgactccggaggcggggcttgaacaccagaccaaattgaagactagctgaa
acagggccagggcaaaagcagctttccataagacccacccaccggtgccawgtgagtttaccattgccat
ggcaacagccagaagttactgcccctttccatggcaatgacccgatgacccaaaagttaccacccctttt
ctagaaatttctgcataaaccgccccttaatttgcatgtagttaaaagtgggtataaatatgactgcaga
actgcctctgagctgctactctgggcgcactgcctatggggcagccctgctctgcaaggagcagtrcctc
tgctgctgctgtrcacagccgcttcaataaaagttgctgtctaataccaccarctcgcccttgaattctt
tcctgggcgaagccaagaaccctcccgggctaagccccaatttgagggctcgcctgtcctgcatca
>MER67A|MER67A  Primate MER67A repetitive element - a consensus.
tgacaaagattctctccttgaccaaactctagccaggctcctctgagcccccttctccactaggcctcaa
cctcggcctataaagacttgaacaaacactaacatagtttctaatagctcaaggccacatccctaggatg
accctagcccccccttaaagtgcctgcctgagaaaactcaaggctgccaaaataatttactgtttgttcc
agccaacacctgaagatagggcccctgtctcccagtctctgtgggagggtaggagcctaacttcgataag
cgccagttagcaaacacagatgggctaatcacattkacactgwccaaccttttgtaatttttcacttccc
tgactctactgagcccccacgcgtnccctctccccnctccctcattctccctttaaaacgcccagtcacc
tctgcacaaatcgaagctgagctcagttcacgctggactcttttccctactgcaatagtatattactgat
taaaatccgtccttaccgctttaactagtgtccggctttgtttatctttgaca
>MER67B|MER67B  Primate MER67B repetitive element - a consensus.
tgagaactgcagaactctcggcacagaacaactccatccaaacccctgcactaagagacttgaccaaact
ctagcatggcttctagcagcataaggccgcgtccctaggatgaccccagcccccccttaaagtgcctgcc
tgagaaagctcaacgctgccaggagaatttactgtttgttctagccaacacctgatgataggcccctgat
ctccctttcttagagcatttactaaaaagggcttacaattgtgaatccttcctctgtccctttgagatat
gtatgtatctcctacaactcaggagtgtctttctcaaggacctgagagccattcctttgaaatgtaatca
tcgagaaggatagggcctctgtctcccagtctctgtgggaggatagaatcctaactttgataancgccag
ctagcagacacagctggcctaatcacattgacactgaccagccctttgtaatttttcacttccctgactc
tgctgagcccccacgtnccctctccccnctccctcattctccctttaaaacgcccagtcacctctgcaca
aattggaatggarctcagctctttcccctactgccagtagttactgaataaaatccgttttcaccgcttt
aactagtgtccggctttgtttatctttgaca
>MER67C|MER67C  Primate MER67C repetitive element - a consensus.
tgtaagggcaaatacaaattaaaaataagaggcttnaattctccctggtgcgaaaagagaaagacaccct
cctctcccttttcttagagcatttactttagaaaacttgtaattgtgaatcctttctctgtccctttgaa
atgtatgtaaatctttttaaaagctaaataagcctcttgccagctttacgacccaggaatgtctttctca
aggacctgggagccatctctttgaaatgtaawcatcaaggaagatagtacccctatctcccagtttctgt
gggagggtaggagcctaacttcagtgggcaccttgctccaagttgcaaaactacctcctgtcataaagat
atgagaagtttatttttcctttggataaagccaattagctaacacagatggccaccccaattaccaggtg
aatttaggatgaactatgtgtgacaaatggtgctgtcaagtcctcttacttgaggactagttattgttta
tcttgagaacatgtatgtaatgggctgtatctgctcggctatataaaagggtgagatttctttctgtstt
tgcaatctcttagcagattgcctgtgatgcgcatcacattctggtttaatgcttattcaataataaaacg
tgttttctttctcttctacctttgtggagaggttttctgggttgggagragattttgtttttaattatat
ttccccaaca
>MER68A|MER68A  Primate MER68 repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttcggtgattcaccaggaggactcatgggactcagcata
tagtcgtactcatagctatgatttattacagtgaaaggatacaaagcaaaatcagcaaaggaaaagacac
acgggcggagtccggaggaaaccaggcgcaagcttccaagagtcctctcccagcggagtcacacaggacg
tacttaattcctccagcaacgagttgtgacaacacatgtgaaacgytgtctaccagggaagctcattaga
gactcagtgccccggggttttcaytgggagctggtcacaaaggcastctctgcctagcacgtaccaaaat
tccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagtttaggcacag
tgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgccagccaag
ggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttttctgcac
agacactctncagatcacttt
>MER68B|MER68B  Primate MER68B repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttctgtgattcaccagaaggactcatgggactcggcata
gagtcgtactcatagctaagatttattacagtgacgtagtaaggatacaaagcaagatcacaaatggaaa
agacacacgggcggagtccggaggaatccacgcgcaggcttccttatgtcctctcccagcggagtcacac
aggacgtacttaattcctccagcaacgaaaatgtgacaacacatgtgaaacgytgtctgccagggaagct
cattagagactcagcaccccggggttttcagtgggagctggtcacaaaggcactctctgcctagcacgta
ccaaaattccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagttta
ggcacagtgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgcc
agccaagggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttt
tctgcacagacactctncagatcacttt
>MER72|MER72  Primate MER72 repetitive element - a consensus.
atgaagacagcgtwctcttnngnattancatgataaataaaaatraaatcctaaracccccaaccgactg
arcagaccacctcttggccgaggggaccccagagwaaccttgaaarctgagttcycggccgkgacgggat
ggagggrtcagacacacctcgttrtacccctcccttrctaaccatsaykrggcttgcytccctaargrct
aaacagaaaccagcyctttcgaaagactccagcactgrnnnnnnntcctttccttcctgrtaagagacca
ccraccacggagwgkttctggccagtctncggaggatgtrcagcgagggttttcgtgtcctctgcttcac
cttttgacgtcagagggccgaaaactccaccctcngatcatgctaacactgccaktttttgwacatgggw
cccatgaagaggcaggaarctcaattgtgcacgcgtgtgtttctccyttcacgnatattcatgactcctc
ctatagcttattgaatatgtatatttggccatyccactcagcataaattcctgttccctttgccyctccc
tcgaaatgtctgtttctggcttctggccggaggctacgcttcccagcctgtcagaatggccgccctgcag
gctgcaaccctttatgagaaataaagctctcctttccaaatttgaacctcntcattcttcagttgacaaa
gtrkcaaarat
>MER74|MER74  Primate MER74 repetitive element - a consensus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER77|MER77  Primate MER77 repetitive element - a consensus.
actacggggggaggtgtcaaattcaaaggtctccaagacmaccctcctgtttartgattcgctagaagga
ctcacagaactcagaaaagccgttatactcacagttacggtttattacagtgaaaggatacagattaaag
tcagcaaagggraaaggcacataggncagngtccaagagarmcaggcacgrgcttccagttgtcctctcc
cggcggagtcgtrcgggcagcgcttaattctcccagcaacgrtgtgtgacagcacgcatgaagtattgcc
aaccagggaagctcacccgagccttggtgtccagagtttttrttgggggtcggtnanataggcatggntg
accccgcagcatggctgaccttggtcttctcaggcttgagccncccaagcatggctgacctnagttactc
agtctycagcccctccagargtcarryaccgtgtagcctaaggcccccaccataaatcacattgttagca
trractgtccggtatggcccaaggccytcgcagataaacaaagayactyttatcaggcaggacattccaa
gggcttagaggttatctcccarrgcctgaggataamcgagggccaganctttctttgggcaaggttaatc
ctttactgyayaagaccaca
>MLT1G|MLT1G  (MLT1g subfamily) - a consensus.
tgtggcggattttaaaaatggccacaaattctttgacactcttcccatcgaggagtggggtccgtntcct
ctccccttgaatctgggtgggctctgtgactgcttcgaccaatagaatrcggtggaagtgatgctrtgtg
acttctgagsccaggtyataaaarrcattgcagcttcctgcttgctggaackctcacacttggagtcctg
agccaccacgtaagaagttcarctrccccgaggccaccatgctgtgaggaagcccaagctastccacana
gagaaaccgagccatcttgraagcggatcctccagccccagtyaagycttcagatgactgcagcyccggc
tggcgtcttgactgcgccgataccacgtgggacagagawgaactrcccagctaagcccagcccaaattgc
tgacctatagtattgrgaacgaataaatgrttattgttttaagccactaagttttggggtggtttgttac
gcagcartagataactgaaaca
>PABL_A|PABL_A  Repetitive element PABL_A.
tgtggcaggccaggtctcactaacacaggcctccataacaactgtttcagcactgactgagtggttaagt
taaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagcccaccaagag
ttttgcctaggcctttcctgggccttgaagcatgacaaaataacgaaggaattcttaacaggacccgttt
aggattaaacaagttttactgggggtctgaagaaactccccaggcctccacaaacaagtttattgggggt
ctgaaggaactccccaaacctccgtgatttagcaggagacaagataagggtaatcaccccagcacctgga
cccatttagattaagtaaatttactgaggctccagaggaaggtcttcaggactcagaccttagttataga
ttagaagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagcttagaaggt
atataagctctggaaaactttgtaattttgagttggtctggtgataatttccaggccttctccctgtaac
cggttacagaaataaaaactctcttcctccccagttcatctgcatctcgttattgggccacgagaaatag
cagcccgaccctcagtttggtccgggaaca
>PABL_B|PABL_B  Repetitive element PABL_B.
tgtggcaggccaggtctcactaacagctgaacaggcaggcctccatgacaactgtttcagcactgactga
gtggttaagttaaatattaaaagctganagagccagtgcccttatacaaaggctggaatgtaacaaaagc
ccaccaagagttttgcctaggcctttcctgggccttgaagcatgacaagataacgaaggaattcttaaca
ggacccgtttaggattaaacaagttttattgggggtctgaagaaactccccagacctccacaaacaagtt
ttattgggggtctaaaggaactccccaaacctccatgatttagcaggagacaagataagggtaatcaccc
cggcacctggacccatttagattaagtaaatttactgaggctccagaggaaggtcttacaggactcagac
cttagttatagattagaagttaatcacttatgtctttagatgaatgcacacttacacgtagacatatagc
ttagaaggtatataagctctggaaaactttgtaattttgagttggtctggtgatattttcccggccttct
ccctgtaaccggttacagaaataaactctcttctttcccagttcatctgcatctcgttattgggccacga
gaataagcagcccgaccctcggtttggtccgggaaca
>MER57I|MER57I  MER4, MER41 and MER65 retroelements.
[encoded data, 7597 characters]
ttttggtcaatctctcaaaattgagaaaatgaccaaaaggggggaat
>MER65I|MER65I  Primate MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>MER41I|MER41I  Primate MER41 repetitive element - a consensus.
tctttctggcaaccacagaagggactacagtgcagaaaccctcaacccaaaggctaactttgagtaagtg
atagggtcctgtaacatctttctggcaaacccaaaaggacaatactgaagaaacctcccaatgcaaagga
aatagactacatcattgataggccgaccttgggcaagtggtggggtacccaggtaaaagatgggattggg
ttagaggcccaatttagggaagtttgggtctctgctaagacagactgggttaaaggcccctcttaataaa
tggcaaggatgcttgaccaaacttggtttagagggccaacttaggagggttagagtccttcctaagattt
aaggggttagaggcccctctcagtaaagtccctcatggttaagaacgggtttggcactaagggatgttaa
ctgccattctctttggattaatctgtgttgcactctttgctgatggctatgggtgacaggattaggcatg
tgatcctgtgatcacgggacatgaggagctttttcttccctaaaaggggaaacttcagagctgctgggcc
tgctggaaaagatcccttctcaactgacaagtgaccgcctgaacttttgattcagtgtctgctgcaatgg
gcaggtctttctctggtctccctgagcgccttgccttccccaccctgccataagcagtgcttttctccct
tccctttccyctctctstctgtgcaaaccggttaaacraacgataaaaatcactgtttatctcctctgta
aagttttrattaatrgaaaaaaggatttttgaggctagtcttaagctgtagcgaatctggtgtrctttgt
gtgtctttctgtatngttctgtcataaaraggggtaccttaggatagaacgcwggctkaggacmcycgta
agctcactgttcaacccagcccagcaaactggtcagttataaattttgctgcaggtccctgaaacaacaa
caaaaaantggatgaggtttccctcccatcttgttttatgtccttggragcttgaccttgtaaccatgtg
gcgrtrctttcgcttggyctctgccatcacaatggcgtcccgggttcaggrttcwattcctgnctcagrr
gatgagtttctttatattcttctgtctatgtatttatatgtgttgtgtgtrtgtgatgtttatatatraa
agagctntrattaattggcttaaaraataagaagagcttaaatcaaatattttgtcagaaaartaraarg
tstartgccttttagttcacgtgactttagtaatctttgrkaaataaagacagtttaaagattattgrta
aaataaaaatgtcttcaaaayttaatktaracatttggtctraattagrcaggtcagatactatstctac
tagatgytttaaggtcataaactgcttctatgacttttgataatttttyaacttgcytgctttanagcca
ttngattctaggtaaggcctggggacatgtggagttagccacgtcccctagctatgctggagagtcagac
tttatctgcgcttctgcctggtgtgtccaaggctaggctccacacctagtacataattaaaatcacttac
taaccaggtttttcaccaaaagtaaaagttcttaagagttaacattgtaacatgtaattaagactactaa
agaaacagttccacaagtaagtcctataaggaaagtgaaatgtgtttttggttaaaaaaaaattataaga
agtcacgggagtxatgagttttctttactttgcctaaagggttagaggattattttaagttagatagaat
aaagctgaaggtttaagcaagttgtggaaggtttatttaaaaaattaattgtaagagattttgtgtgtga
atatattggctaaagttgaaaaggcattattcagtttttccataaattaaacattggaataaaagcaaaa
caggtttttgttagagcaaaaacctgcttatgacctgctttttaacaaacatttgtaaaggattataaaa
ggtttatgagaatgttaccttatggtcaaacattaaaattgggtagatatgtctataaggttttattaag
aattgggtttgacatcaataatacactaatgcaacagtgacatttggctgatttagtataaaagtcatag
aggaagcatcatcaaatatgaaatggtgtttggctttctttgggctgtatttgtataaatgtgtcattgg
tacatgttccaaaattattttaaaaaaaacttctttaaccctgatatgacttagtgtatgctattaataa
ttgttatgnnnnnntaaattattgcgtgccacagaggtaacaaattttccttgtcaattgtgtctttaac
tgtggctgtcctaagactttttgtcatccatagacaattgttgtcttgttttggtcctctttagaaggtg
gtttataatcagctgtagaactctaacaggtgctcttaaatgcaggtttctgataactttggagattgtg
acattagaacggaggaaaaacattcaggactcatgaagagctgaaatrttcatgaatatcaagcagaaca
gggagttaactgcatggactgaactaanagaagtctaacgtgtaaaacgttgctgatcctttgttttgtt
tttcagagtcaaggaaactttttcttttgagctatttacagcttttagcaattgagtaaagtatactyct
gtgaacaaaatttggagcatrtttgtttctctctacctgatttctccagaatttggaaactattcgtgag
tattctcaatttatggcaatatagttatttgcataagtgcaataagaatctgttytctttagtaacagga
cacaattggagaaattggttattttaccaaggctttgactggaatggcatacttccctttaaggaatcaa
anttgacttrycgagccgataaaagccccttggggaatctgrcctcataccttnttcayacgcagtccct
gtacagggttcctgacctgtggtaagtaaagaatgtcactttctracaggcccagrarccccaagttaty
ttgrgacctcaagaggagaggaatttacycaactcataggtatttgakggtacaaanccatggctgggct
cagctttaaaaaagtcttatccgagattccttctatgaaacaaagttccatcaaagccaattttaaaagc
ctatgtgaaaaataattattcttgctgcactktatacaaataatyaggccaagtataataaarcaaaycg
gtcctaccatgatttgtctttaryaaaaatggraaactggagagagaaaaattatgtttcaaaacctata
gtacacytgttgttarattctartcttrcctaatgtttttcagttkttnttatnttctrcantttagact
aactctacttattcctgtgaaccaaccagtgatctctggctgcwgctcagaagaaacaagrartgatggg
taatataaaaatccggatnntattctaattctgggcacgtattggaatcggctaacaaccccatatcagc
ttggttccaatagttgcccagttcatggaaagccttctaatttagtttacttgggataattttgcttatt
ttgctttactnttgtggaatatattgctgttgtactctttgtgtaggaatgcaggataagcttactraat
gttttcttaaaycgaacccttattcctcttccagggtaccatcttttgttgggaactcagttacaaataa
ccctcaccataccagtactttctggaatgagctcctcttctaccctggagggcaagagaccataatagtc
aggcagaaatatcattgcccctattcagcctgaagaagttacagaagatgaatctttgtccttctacaac
cttaggattaagggttcttttata
>PTR5|PTR5  Human PTR5 mRNA for repetitive sequence.
tgagaggtggcagtgtgctggcagccctcgcagccctcgctcactcttggctcctcctcggccttggcgc
ccactctggccatgcttaaggagcccttcagcctgccactgcactgtgggaacactggccaaggccagag
ccagctcactcagcttgtggggaagtgtggagggagaggcgcaggcgggaactggggctcgatgcggcgc
ttgcgggccagcgtgagttccggtggttggtggcttggcgggccccagactcggagcggctggcctgccc
tgctggccccaggcagtgaggggcttagcacccaggccagcagctgtggatggtgcgctgagtctcccag
cagtgctggcccaccccaccagcactgcactcgatttctcgccaggccttagctgcctccccgcaggcag
gccttgggacctgcagcccaccatgcctgagtctcccctgctgccgccgtgggctcctgcgtggcccaag
cctccccgacgagcactgccccctgctccccggtgcctggtcccatcgaccccaagggctgaggagtgca
ggtgcatgctgcgggactggcaggcagctccacctgcggccccatgcaggaagccagctgggctcctgag

>L1M2_5|L1M2_5  L1M1 or L1M2 LINE1 repetitive element 5' end - a consensus.
acaaantagggaaaaatggcggataggaggcaggactaaattgcagctcccactcggatggacagagcag
catgtggagactcacatcgtgaacttttgctccaagaaccaccgcaggaatataycaagaaagccgagag
aatycacagaccctctgaaggaagcagattgctcctgcargayccaggaaacggcccaaaaactgtgagt
gcccaaagtgtgagaagggraaaatctgcccccgaacacacatcctyactggggaacctgaagatccaga
tcacaggagaaggatttgaccttacctggagctgagacaatttagagggccgagcaaaatacaggggtag
aggaagcagtgggaaaagccctgtgggctctccgggtccccagggaagccatttctgactttgtctcaca
ggggtccctggggagggctgccagwggaactggggaaaggccacagggagaaggaaacctccagctgaac
tttgtaacaattccgaccgaacgcgaagtttcctggccagaactcaggggagggcgtgaatccggwgtgc
agactcagcacagaagccgtggcaggcaggaggcgcgaagcctgaaagccctgcttgctttctcagcwgg
gaggctggtagcctggggcaagttctcagccctgctcaccaactgcctggaaataaactcggtgctgttg
tgggggggcacggtgggagtgagaccggccttttkggttgcatgggagctgggtgaggcctgtnactgcc
agctttcccccacttccctggcgacctgcatgacacagcagaggcagccataatccccctgggaacgtaa
ctccattggcctgggaactacacccccatccctcacagtagccgcagcaagccccgcccaaggagactct
gagctcagacatgcctaaccctgcccccacctgatggtctttctctacccaccctggtagccgaagacaa
aagacataawctcttgggagctctayggccccacccatcgcctgagaaacwgaaatayttaycywggcma
mcttagggcaagcttrtatccwccctatactrtcgcagctgatgccctcttgaaagcgccacctcttggc
tggaggccaaccaactcaagacattacagcaaytcayracagaataaccctgcccctarrraaggagaaa
acgacagctatcaccactgcctgcaacatcctggctaaccagaggtcctgagtctgtccacgtgayaast
tcactrctakyataaccagcattcgagaaarccagcacactaagtctatctacaaccaaggaatctcaca
gagtctayttcactcccctgccacctccatcagagctggtgctggtattcaccgctgrgagacttgaaga
caggtcacatcacwggatycyttgcagacattccccagyaccagcccggagtctggtagctccactgggt
ggctagayccagaagagcaataacgatcactgyagtccggctctcaggaagtcccattcctaggrgaagg
gggagagcaccacatcaagggaacaccctgtgggacaaaagaatctgaacggcagsccttgagtcccaga
tcttycctctgacatagcctacccaaatgagaaggaaccagaaaaayaattctggtaatatgacaaaaca
aggttctttaacacccccaaaaratcacactagctcaccagcaatggatccaaaccaagaagaaatcyct
gaattgccagaaaaagaattcagaaggtcgattattaagctactcaaggaggcaccgaggaaggtgaana
ccaacttaaagaaanttanaatataatacaggatatgaatgraraaatctycagwgaaanagatagcata
aakaaaaaacaatcamaacttcwggaaatcgaagyacacttatagaaatgcgaaatgcwctggaaagtct
carcaatagaatngaacaagcagaagaaagaacttcagagctcgaagacaaggytttcaaattaacccaa
tccgacaaagacaaagaaaaaagaataagaaaatatgaacaaagcctccaagaagtctgggattatgtta
aacgaccaaacctaagaataatcggcgttcctgagnaagaagagaaatctaaaagtttggaaaacttatt
cgnggaaataatcgaggaaaacttccccgrcsttgctaragayctagayatccaamtacaaagaagctcw
awraaca
>MER41D|MER41D  Repetitive element MER41; subfamily MER41d - a consensus.
tgttagggaagcaggagcctaggagagccagagtgacaccattttaaaatcaactccatcttaaaactag
caaggcacattccttgccagtcacgacccatggtcctaagatgtttacagttgaggaagcagcttgawaa
tacctacaaggacacactcctacaacaacagaaagtccagatgtcccaatacccataacaatatatgctt
tcaagataattatagtcatgctttgatgtacttacgcactaaaatgtcaaagatagttttctttaaatca
atatamtaataaattttgtcatgctgtcagcccacccgcacgtaggcacagcttagtttagtctttacat
agacaagactcctatataagaaaagtttaagacagagatggcgcgttcctccgcctnctttccggggacg
ccctactctgtaatggagtagtttttaataaacttgctcttctcactgtactccgcaactcgccttgaat
tccttcctgtgcgagatccaagaaccctctcttagggtctggatcgggacccctttttctggtaaca
>MER51A|MER51A  a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacactgacttcctagaactnaat
caaanggaaaaccccaactttccacgtccamgtaacmaaaggaccagaggctactccctttrcannnnnn
ngatgaaaaattgaaagtacctctgattggtcccttcccgcaaccaatcaggctggtcgttggcccaagt
cttcatttgcataggagtataactttgtaacttcacttcagcctctgattgatwrctttccgcaaccaat
cagacgtttgcatagggtgtaactttgtaaytcgcttcagcctctgattggtcccctcccacaaccaatc
agactgatcgtgggccacctcttcatttacatagggcgtaccccaagtaaccaatgggaaacctctagag
ggtatttaaactccagaaaattctgtaaccggggctcttgagccgcttgctcgagcccgctcccaccctg
tggagtgtactttcgttttcaataaatctctgcttttgttgcttcattctttccttgctttgtttgtgcg
ttttgtccaattctttgttcaagacgccaagaacctggacaccctccaccggtaaca
>MER51B|MER51B  Putative LTR of retrovirus-like element - a consensus.
tgaggcaggaaaatagggtctggaggcagggaacataaggccgattcacacttcagctatgacaggaaat
atcctctccatagggcataggccgagtaaatgactttgtaactttacttcgtcctcttcatttacatagg
gcgtaccccaagtaaccaatggaatcctctagagggtatttaaactcccaaaaattctgtaatggggctc
ttgagcccctatgctcgggcccgctcccaccctgtggagtgtactttcgttttcaataaatctctgcttt
tgttgcttcattctttccttgctttgtttgtgcgttttgtccaattctttgttcaagacgccaagaacct
ggacaccctccaccggtaaca
>MER57A|MER57A  a consensus.
tgttaaattaagtttagcctaaagctgcctccttacatattttaagttcggcctaaaggtttctctgtac
atagtgaactataacctaactggaggtgtaaacagaccgtagcctactcttgtgccaatcactgagtttc
ggccaatcacaggcagccaactgttcaaaccatgttcaaataaggcaaatgccgagctgtaaccaatcca
gctgtttctgtacctcacttccattttctgtacgtcactttcctttttctgtccataaatcttctaccac
atggctgcactggagtctctgaacctactctggttctgggggctgcccgattcgcgaatcgttctttgct
caattaaactcttttaaatttaatttggctgaagtttttcttttaaca
>MER57B|MER57B  Medium reiteration sequence MER57B - a consensus.
tgttaaagcaagctaaatatagcctgagaaggactccgtacttctatatttgagtccttgtggatgaact
gtaacctagcttaataggcagacaaggttgaaaacctaacttaggagtatgcgcctgtaacaatagctga
gtcttggccaatcccagcggccatacttcaaccactcanagactgctaagtgttcaaaccgtgttcaaat
aaggcaaacgccgacctgtaaccaatccagctgtttctgtacctcacttccgatttctgtacttcatttt
cctttttttttatctataaatttgttccgaccacgaggcatccctggagtctctctgaatctgctgtgat
tctgggggctgcccgattcgcgaatcgttcattgctcaattaaactcctttaaatttaattcggctgaag
tttttcttttaaca
>MER65C|MER65C  MER65c repetitive element - a consensus.
tgtgaaagttgatcatacgaattgggtcattcttgtcatacccaactaaaaccagggccgaggggcccag
ggggaaaaggcactcggggcgcatagcattgctccaaaatataattctctgcaaccctggctgctgaaac
tgcctgttgtaacctgaaaccagttttatctaacagctactgaaacaacctactgtgactctaagactag
ttttacccaccaccgtcactcaccaatcagagcttgccagctccccaaaactttactagtgccaatgaac
tttctttcaaaacaatatgtaacatttctcttttttataaaacctccaaccttctctttgttctttggac
ataccgaagaccacctggtctgtgtgtatgccccaaattgcaattctttcttcccaaataaaacgtttta
aatttagggattcgtctctacattttattttgacttcgaca
>MER83|MER83  MER83 repetitive element - a consensus.
tgtggagtcctaattagggaaaaggagtcaggctggcgggaccaggggaaagcaaagggagaaagcaaat
aagctataagtctgcctttcttcatggtccaggacacatagccctcctgcgcaaataactcacaatcttc
ctgcgcccaactattatcaaacacctcagctgacagaaaaatgcaagttagctcmctgcaaccttggcat
tatcagtactgcacgcagcmctctgcagcccaagaaccatcctataaaatctccagcaagcctttgtctc
cttgcagtcagctcctctcttgctggtctgcctgttgcttccttgcaacatattttcatactttctctaa
taaatctgcctttctttacctacaactgtcttggtaaattatttttacctcccgcgccaccggccccaga
tagtcgccgctccccacgrca
>MER84|MER84  MER84 repetitive element - a consensus.
tgaggagagcaaagaccacctggtgaccatcaaacaggccatccggaggcaaaactccttatctggggaa
tttagaagtaattagacttccctattatctaaagcaggcatctggttccaggcctctttcccnnaaaaac
ttataagtaactagaatttctatacgtctccggaatgcatgcatgctgaaactcactgtgcaacccttgc
tgacatcaaggcaccaaaatgtctacaaatgtaatcatttaccatgacctacgtggctaatatggtccaa
attacccttaagctcccgctttaaggtccataaatgctcctaaggaaaaatccaccgcggcgcgctcagt
cctctcttgctgaggcgccccgctgcactctkctgcagcgttctttctgtctaataaaactttccttttt
caaacctatactgttgtcggtaaattctttttaccaacccacgagtcgaccacttcccgatgccggggct
ctgacacctcgcctggca
>PMER1|PMER1  Putative non-autonomous DNA transposon - a consensus.
tagagcagtggttctcaaccttcctaatgccgcggccctttaatacagttcctgtgggtcgcgacccaca
ggttgagaaccgctgctat
>MER54|MER54  Primate MER54 repetitive element - a consensus.
tgtagtgaattcttataattttatgttgcctcggcatccattttgaatataagtttaactttctcatacc
agaagcagggctyagtcacccttgacacggtttccagttctccacctcctcccagttcctcaatgtggtc
gacccagatatctgccttatacmaccgcctcctggkgaccacctccctatggaacagctggatacaacct
acttgacttgccccactgacccccacaccccacatggactgtgcaggtatgccacagtgaccacctctca
gtcacagcgtgaccccacggaactcgtgcctgcttgctctaaacccaccaattagaactccccgcgggaa
acctgcttgggtaacgccctggaccccaataaaggctttggtcccacaggtctctctctctctctctcgt
tctccccacccgttggttgagcatgcgtgtcccggacagcttcccccttcccattggccctgcgaggcat
gctgccctcttctctctgggatctgtaagtaataaactgcttctgttatttcatgtgttttgttgtgctg
cctcctctgtgtctcacctgaccgacacacccaaacctaactctcttcctggtcagggctctcctagaga
gtggctatcttggcaggaataaactggacacaggtcagacaagagccacaagggcgtctgccagtgtaaa
caagtttcctgtgagagggacacctggtcacgggtcggacacctaggcattaggccgtccgccaggataa
agaagtatcccgtgaaagatacactgtaaacacccacaaccamcttccctggagccccatcagggcaggg
ctagagtttatagccactctccagagagagacctcaagaccaaattagaggaaaatacaaca
>MLT1H|MLT1H  (MLT1h subfamily) - a consensus.
tgtggtagntgattgcaaaaatgacmccattctccacccctccctgtatccatgccctttgcaatgtgac
tttgcagctcctcccatcaagaggcggagtctgtttccccaccccttgaatctgggctggccwtgtgact
tgctttggccaatrgaatgckgcagaagtgacggtgtgccagttccgagcctaggcctcaagaggccttg
cgtgcttccgctcnctctcttggaaccctgccaccgccatgwgaacaagcccgggctagcctgctggagg
atgagagaccacgtggaggagagccgagscgccccagctgaggccatcctggacmggccagcccccagcc
aagatcagcagagccaccaantcaaccagcagctgaccacagatgcatgagggagcccagctgagaccag
aagaaccgcccagctgagcccagcccaaattgccgacccgcagaatcgtgagctaaaataaatggttgtt
gttttaagccactaagttttggggtggtttgttatgcagcaatagctaactgataca
>MER7A|MER7A  Nonautonomous DNA transposon.
cagtcatgcgtcgcttaacgacggggatacgttctgagaaatgcgtcattaggcaatttcgttgtgcgaa
catcatagagtgtacttacacaaacctagatggtatagcctactacacacctaggctatrtggtatagcc
tattgctcctaggctacaaacctgtacagcatgttactgtactgaatactgtaggcaattgtaacacaat
ggtaagtatttgtgtatctaaacatagaaaaggtacagtaaaaatacggtattataatcttatgggacca
ccgtcgtatatgtggtccatcgttgaccgaaacgtcgttatgcagcgcatgactg
>MER7B|MER7B  Nonautonomous DNA transposon.
cagtcatgcgtcgcttaacgacggggatacgttctgagaaatgcgtcattaggcaatttcgttgtgcgaa
catcatagagtgtacttacacaaacctagatggtatagcctactacacacctaggctatrtggtatagcc
tattgctcctaggctacaaacctgtacagcatgttactgtactgaatactgtaggcaattgtaacacaat
ggtaagtatttgtgtatctaaacatagaaaaggtacagtaaaaatacggtataaaagataaaaaatggta
cacctgtatagrgcacttaccatgaatggagcttgcaggactggaagttgctctgggtgagtcagtgagt
gagtggtgagtgaatgtgaaggcctaggacattactgtacactactgtagactttataaacactgtacac
ttaggctatactaawtttatwwwwwwwwwwwwwytttttcagcaataaattaaccatagcttactgtaac
ttttttactttataaacttttgcatttttaacttttgactcttttgtaataacacttagcttaaaacaca
aacacattgtacagctgtacaaaaatattttctttctttatatccttattctataagcttttttctattt
wwaaatttttwatttttttattttttaaaanatttttgttaaaaactaagacacaaacacacacattagc
ctaggcctacacagggtcaggatcatyaatatcactgtcttccgcctccacattttgtcccactggaagg
tcttcaggggcaataacatgcatggagctgtcatctcctatgataacgatgcyttcttctggaatatctc
ctgaaggacctgcctgagnctgttttacagttaacttttttttttaataagtagaaggagtayactctaa
aataataataaaaagtatagtatagtaaatacataaaccagtaacatagtcatttattatcactatcaag
tattatgtactgtacataattgtatgtgctatacttttatacaactggcagcgcagtaggtttgtttaca
ccagcatcgccacaaacgcgtgagtamtgagtratatgttgcactacaacgtcactaggcgataggaatt
tttcagctccattataatcttatgggaccaccgtcgtatatgtggtccatcgttgaccgaaacgtcgtta
tgcagcgcatgactg
>MER55|MER55  Human MER55 repetitive element - a consensus.
tgaggagagtttaatgaagggactatttacaaaggtgtgggcagggttaagggaarccnacaagggatgg
tgaagcacctmagggctagcaacatgagaagctattaccactcctaggcctaaarggrcaaggggargga
gctgttaccrgaaaccagtgagagctgnagctgtagctacaaggagagggcygcccaaaaggagctgtgg
ctttcggtagaagaatgtagccantgccaaaccgyagcccagcagggagggagccrgataaataccccaa
tctctctctccttcaccctccaatctcctgccagtgcctcccattggccaaacccaaccagaagccagag
ggcaaagaagcctggtgaatgcagtccatagaggtcagggcacagagcagggcagagaagggtgganagt
ggatcttgaaarggaaaaragaatatccagtrcagcccattccttttnncccctctgcatccactcttnc
tttttgtctggatgaaaavctcatgttctcaaaanagaatactcaaagtcctabcagctrctatatcatt
acaggatgatgtcaattcagttatrymtmtrcccacntnaaatctaaaatattagccaacaccag
>TIGGER2|TIGGER2  Autonomous DNA transposon.
cagttgacccttgaacaacacgggtttgaactgcgcgggtccacttatacgtgrattttttycaataaat
atattggaaaaawttytggagatttgcaacaatttgaaaaaactcgcagacgaaccgcgtagcctagaaa
tattgaaaaaattaagaaaaaggtatgtcatgaatgtataaaatatatgtagatactagtctattttatc
atttactaccataaaatayacacaaanctattataaaaagttaaaatttatcaaaacttayayayayact
tacagactgtacgtggtaccattcgaagtngagagaaatataaacaaacntaaagatgcagtattaaatc
acaactgcgtaaaattaactgtagtacatactatactaccgtaataattttgtagccacctcctgttgct
attgcagcgagctcaagtgttgtgagtacctgcttaaaacgctskgtgatgctaatcatctccgcgcgag
cagttyatctctccagtaaattgcgtattgcagtaaaaagtgatctctcacggttctcgcgtatttttca
ttgtgtttartgcaatattgtaaaccttgaataacaccatgggacccatacgaagtgccactagtgatgc
tggaagtgctcccaagaagcagagaaaagtcatgacattacaagaaaaagttgaattgcttgatatgtac
catagattgaggtctgcagctggggttgcctgccatttcaagayagatgaatccggcgtaaggaccgttg
tmaaaaaagaaaaggaaattcgtgaaraccgtcgctgcagttatgcccagcaggcacaaaaacttgtnac
tttttgcgaaatacctttttatgttgtattgaaaatgcagcttttntgtgggtgcaggattgctataaga
aaggmatacctanagactctaatatgattagagaaaaagcgaagtcattatgtgannacttaaagcaaaa
rraagatgamrgatctaaagctgganaatttaatgccagcaaakgatggtttgacaattttagaaagarg
twtggcttaaaaaatktcaagakaacaggagaagcasyttctgctgaccaagagacagcagacgagttnc
cagatgccattaacaaaatcattgaggagaaaggatatctgcctgaacaggtttttaatgcagatgarag
tgccctattctggggggaaaaaatgccacaaagracatttattagtaagnaagagaagcgagcaccagga
tttaaggcargaagggataggctaactctactgttttgtgcaaatgcagttaggtttatgatcaggactg
cccttatctataaagctgctaacccccgagccttgaagggaaaagataaacgccagctgccagtcttttg
gttgtacaacaagaaggcctggacaacgagaaccctttttctggattggttccattkatgctttgtccct
gawgtcaggaagtaccttgccagtaagrgactgccttttaaagttcttttgatattggacaatgcccytg
gccacccagaaccccatgagttcaacaccgaaggtgtcgaagtggtctacttgcccccaaacacaacgtc
tctaattcagcctctagatcagggggtcataaggacctttaaggctcattacacacggtactctatggaa
aggattgtcaacgctatggaagagaaccccgatagaragaacatcatgaaagtctggaaggattacacca
ttgaagatgccattgttrttatagaaaaagccgtgaaagccatcaagcccaaaacagtaaattcctgctg
gagaaaactgtgtccagatgttgtacatgacttcacaggatttacgacagagccaatcaaggaaatcatg
aaagagattgtggatatggcaaaaaagttggggggtaaagggtttcaagatgcgaatcttggagaaattc
aagagcwaatagacaccacaccagaggaattaacagaagacgacttgatggagatgagtgcttccgaacc
agtgccagacgatgaggaagaagacatngaagaagcagtgccagaaaacaaattgacattagacaatctr
ggcagaagggttccaattattcaagactgcttttgacttcttttacaacatggacccttctatgatacgg
gcactgaaactaaagcaaacagtggaagaaggattggtaytatacagaaacatttttagagaaatgaaaa
ggcaaaaayrtcagacagaaattacgatgtatttccgtaaagttacaccgagtgtgcctgcctctcctgc
ctccccttccacctcctccacctcttccacctctgccaccctgagacagcaagaccaacccctcctcctc
ctcagcctwctcaatgtgaagacgacgaggatgaagacctttatgatgatccacttccacttaatgaata
gtaaatatattttctcttccttatgattttcttaataacattttcttttctctagcttactttattgtaa
gaatacggtatataatacatataacatacaaaatatgtgttaatcgactgtttatgttatcggtaaggct
tccagtcaacagtaggctattagtagttaagttttkggggagtcaaaagttatacgtggatttttnactg
cgcggggggtcagcgcccctaacccccgcgttgttcaagggtcaactg
>CHARLIE3|CHARLIE3  CHARLIE3 repetitive element; HAT-superfamily DNA transposon.
caggggtccccaacccccgggccacggaccggtaccggtccgtggcctgttaggaaccgggctgcacagc
aggaggtgagcggcgggcgagtgagcgaagcttcatctgtakttacagccgctccccatcactcgcatta
ccgcctgagctccacctcctgtcagatcagcggtggcactagattctcataggagcgcgaaccctattgt
gaactgcgcatgcgagggatctaggttgcgcgctccttatgagaatctaatgcctgatgatcnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagccctttactgttggtgaagaggtgatcctgcct
gctgccaagcacatttgtcatgaactcttaggagacgctgcagttcaaaaggtgacatgtgttcatcttt
catctttcagccatcacaacaaaatgaactgatgaaacagcagaggatattgaggcacagttgttaaaga
ggatgaatgagtcactgtggtatgcaatccaggttgaaaagtctatcaatgttaacaaggcaacaaggct
tgcttttgtgtgatatattttcagaaggatgtgcaagaggatatgtcatacgcacttttattgccaacca
acaccacagctgcagaattattcaagtctttgaatgattacatatcagaaaaatggaattggtcattttg
tgtcagtatacgcacagacagagaggcttccataactggatgtccttctggcttcacaacttgggtcaga
tggtcacttctgcatgtgactccacacattgtgtcacccatagagaaatgctggctagctgaaaaatgtc
acctgaatttagcaacattttgcaggatatccttaaaattatcaaccacattaagtacatgcccttaacc
cacatctgatggtgcagctctgtgaggagatggacgcagggcacacacgtcatctcttatacacagaagt
gattgctttctaaaggtagattactggccagagtttttgagttacaagagccactccagagatttctttt
agaaaaacagtcaccactggcaacacatttcagtgacacagaatggctcacaaaacttgcttacttatgt
aacatattcaacctgctcaatgaagtcaatctgttgtcacttcaagggagaatgacaacggtgttcaagt
caacagataaaagtggctgcattcaaagccaaactagtattatgagggcaatgcataaacattgggattt
ctgacatgtttcaaacattagcagagattttgaaagagactgagccagggccttctttctcccagctggt
gcatgatcacctatctcagctttcaaaagagtttgagcattacttcccaaccacaaaagaaccccgaact
gggaaggaatggatccgcgacccgtttgtgaataagccacgcgaatcacctttgtccgcgctagaagagg
atcaactgcttgagactgcaaatgacagtggccctaaaagtgtgtttgagacaacttcaaatctccatac
gttctggattaaagtcaaagcggaatatcctgagattgccacgagagcactgaaaagcctgcttccattt
ccaacatcctgtctttgtgaagcagggttttctgcagtgacagcaaccaaaacgagattacagagtagac
tggacataagcaacacacttagggtgtcactgtctcccatcacccccagatgggaccgtctagttgcagg
aaaacaagctcagggctcccactgattctacgttatggtgagttgtacaattatttcattatatattaca
atgtaataataatagaaataaagtgcacaataaatgtaatgcacttgaatcatcccgaaaccatcccccc
cccctggtccgtggaaaaattgtcttccacgaaaccggtccctggtgccaaaaaggttggggaccactg
>LTR9|LTR9  LTR from human endogenous retrovirus-like sequence (HUERS-P3).
tgaraanaaactgatataggagttaagaagaaatcacttaggcagatagcaagggtatgggagtcctcag
taaggcttttctttttaatgaaaagcagccccaaatcattttctaacaaagagcagcctgtaaagttgag
ctgcagacgyagacaagcaagctggnagcttgcacgggtgaatgctggcaggaactagggactagacatg
ttcaagatggcggctccatcttcccttctctgccagccacgtgtacagtaaggagcagacaagatggcgc
tggccaaggggaaagttcatttgcataataagattagggtggrgagrccagccttccccgcgcgctatgt
aaacgtcatacctgatcaaaccaatctrtgagccctacgtaaatcagacaccacctcctcaarccggact
ataaaatccggcacatccgccaccagctggtcttttycnctcggaagacccctctctctagagagagagc
tgtttttctttttcttttcttctgcctattaaacctccgctcctaaactcctcatgtgtgtycgtgtcct
aaattttcctggcacgagacgacgaaccccggtgtatayataccccagacaatgtagccacttcataang
gggrctcgtctrggat
>MER52|MER52  a consensus.
tgganntcatagtgttacgggatccttggggtgtcgcttttccggccggaaacctctgtggccagtggcg
cctttgcctgagttttgcttgggcccgctgggctcgttccgcccactcggcctggcaggctgcgctcggc
tcacgctaccggcctggatcccatgcctgccaagggcgagtcaggcgcggarcagngaggggtgtgtgag
cgagcgtggggtccggccactgngcacagtcagacatgccggctgctgcagtggggcgggcagctccagg
cgccggcacaggcgccggctctccgcgaggctgcggctggaccaggcacaccgcaagcagcttccacagc
tggcaccggggaacgcagtggcgcccagaagcttggagacgccaggaaccgcagggccccaaagagggag
tcacagccctggctcggggagctcccaggtctgggctcccmgaagggccacagctcttctctccttctnt
tcgcccgcaacatggcgagcagggggcgtgtttcagccctgtttgtgttacagctctttyagccccgcca
ttcggtgggtcccgagttcttgtcctgcgwccaggaagaatgaggtacacagacaagtggagggtgagca
agacgaagaggagctttattgagcgacagaacagctcagaggagacccgmagtgggtagctcctctccgc
aggcaggtcgtcccgwcaagtgttcagctctcagcagagaggagaccctggagtgggtagctcctctctg
caggcaggtcgtcccgwcgagtgttcagctctcagcagagaggagaccccggagtgggtagctcctctcc
gcargcwggttgtcccgtcgtctgctcgagtctggctgagcctggggcttttatgggcctcagaggggag
gaagtgcatgccgattggtccatgggtggccatgggtgggcccagaaaaagcaccacaagttcccactcc
ggtccgcaggactggcagnncccnctcccagccttcaggcnntccctggcttgaaggtggggcctcactg
gggacccgcccctttctgcccaggagcctgtctgcctcctgccgccgttcatggtgcccgggctgttcgt
gccgaggggcgcctgcaggccagcgccgagctgccctcagccccgccttggcctccctcccatgctcntc
ggcgtccaaagtctggagggggctgaggcggcagggggctggtgtgtcagcnctgcctcgagcgtgcgca
catctggctgggctgcggcagcgcccaggctcagcctcgactttgctccaagatcggagcgggtgccggg
agcagagagaggccaggcagtgggagcaggcacttctgagcctgcggagcgggcgccgggagnaaggaga
ggccaggcagtgggagcaggcatttccaagcctgtgggggcaggggggccttccccggcccccaagagca
cagagatgcccgggtccacagccgcggcttgggcggctgcagctgcacccgggagggtggggctcccgcc
tgcccccggcccccaagagcacagggangcccgggtccgcagccgcggtttgggcggctgcagctgcacc
tggggagctcctgccccaactcggaaggggcggggctcccgccggcttcgtggagcgcgcagccccggcc
atgcctccctgctgcagccggcgtaatggcagcggccactccagatgggccgccgctgccatcantakgt

>L1M4_5|L1M4_5  Partial L1M4 LINE1 repetitive element 5' end - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>L1P5_5|L1P5_5  Primate L1P5_5 repetitive element - a consensus.
ggaggtggccaagatggccgactagaagcagctagtgtgtgccgctctcatggagagaaatggaaggggn
gagtaaatacagcaccttcaactgaaacatccaggtacacgcattgggactaatcaagaaaacaacttga
cccatggagaacggagaaaagcaaggcaggacgacggcccacccgggagcgacacggagccaggggagcc
tcccccgcccagggaagtggtgagtgaatgtgcggccccgggaacccacgcttctcccacggatctttgc
aaccctcaggtcaggagatcccctcgtgaacccactccaccagggccttcagtctgacacacagagctat
gtggagtctcggcagagcagccgctcaggcatgcgtggagaccctggagccttagatacccgggcttccc
ggcaaaagtagctgcaactccagcaaagcgggaggttagacccccatacatacccctaggaaagaggctg
aatccagggggccgagcagtgayagtctgcaggccccacttccacrgcacctcacaggataagacccact
gacttggaatttcagcyagccacyggtagcagcgttgcacctmcctgraacrgagctcccagggggaagg
ggcgggctgccatctttgctgtttgggcgacttagccattccagccttcgggctttggagagtccaagcc
aactaggggcagaagsgatcccccagcacagmmcagcwgctctaccaaaacrtggccagactgcttcttt
aagtgggtccccgatcctattcctcctcgctgggcgggacctcccaaccggggcctccagccacccccgc
tggtgttytctagccgacagagatttgtaattctccctgggacggagttcccagagggaagggcgggcca
ccatctttgctgtttgrgcggctcagccgttccaaccttcgggctttggagagcccaagctgaccggggg
cngaaggaatcccccagcacagcacagctgctctaccaaaamgcggccagactgcttctttaakcgagtc
cccgatcccatttctcctcactgggcgggacctcccaaaccgggtctccagccacctcctgcakgtgttc
tcnggctaacagagatttgaaccyccctgggacgragctyycagagggaggggcaggcygccatctttgc
tgtttsrkarmcttmrctgttsawaccttcaggcwytggaraattyaaggcgacyagggkctrgancgga
cccccagcacagyacagcwgcyctaysraaawgtggccagactttttkttaagtaggtcccnaatcccnt
wtctcctcactgggtgggacctnccaaccagggtctccagccacctcctncaggtgnttttgggctggca
acaggtccgtacctccctgggacgaagctcccagaggcaggggcaggctnccatcttcgctgtttcgtag
ccttcactggtgatacctccaggtactagaaaatncgaggtgactanngactggagcgggcccccagcat
attrcagcagccctacggaaaagtggccagactgttatgtgggtscctawtcccatatctcctcactggg
cgggtcctccaggcctgggtctccagccaccacyyaccggggctgtcgngccagtaccarctcwgcaact
ccctggacagagccyccaggggaaactgaaagcctctctgccactgcctctgcagtggaactgcccttgc
taccctcagactaacgaaggagsaaagaccctaagtgccttatccacacctccaacaagctgcagtcgac
ccaaggagaggaggccagtctgtctcycacnggtcccacmcaccccccacwgcttgtcaccasrcaggra
acccctggcttgggcccacagcacagaccctccatcctgggctgactgcactgagcgattgctgacctgc
atctctctggggtggagcccccaggagacaagcaaaagaccctcggccacaaccactactaaggtccctt
cctccgckgcctccaagttggggagaaaacataaaccctgagatcaccccagagctgttatgngcagccc
ggnagtgccaagntacgatctacagccagcactcaagtgngagaggagnccacactttcatagcattgag
agggaacanggctgcaaangtgaggaaatacaggggagccacacgactgagcaagagcctaccaactgac
cactnnanctaagngtcacctactggatcacgccctaaagcttcaagaccaaaagtacttcacaaacata
gccccctgtgaaacaagagacaggaagtaagcttcaaataaagaccatgcacaaagcctcagcccagtga
aaacatccaaaaaggaagtctattgattgtattcaatgcacactgcagttaaaggaanatccacanacag
agatgagaaagaaccaacgcaagaactcgcgtaactcaaatggtcagagtgtcttatgtcctccaaacga
ntgcatagttttccaacaaaggttcttaactaggctgagttggcatgaatgacagaaatagaattcagaa
tatggataggaacaaagatcattgagattgaggagaatggcataacccaattcagggaaactaagaatca
caaaatcatgataaaacgatacaggagctgaaggacaaaatagctggtataagaatgaacctaacaaata
catctgatagagatgaaaaacacactacaagaatttcacaatgcaatcacaagtattaatagcagaataa
agcaagctgaggaaagaatctcagaaattgacaactggctctctgaaataagacagtcagacaatcacaa
agaaacaagaataaaaaggaatgaacaaaacatgcaagaaatatgggattatgtaaagaggccaaatgta
tgaacgactggcatcactgaaaggatggaggagaaagcaaacaacttggaaaacgtatttcaggatatcg
ttcatgaaaacttccgcaaccttgctagaaaggccataagtcaaactcagaaaatatggaaaact
>L186_5|L186_5  Partial L1M4 LINE1 repetitive element 5' end - a consensus.
tgacatgtaangagcttggaagttggcactcccttcaacaacaacaaaaagntgaacaaacagaaaaatc
aatgacttttcttagatccataagagaagtgaggtcacagggcaaactgtcancctgaaatctggagaga
caggcgcatgcagagaatcacagcagagctctgctttcctgaagcagaagcctctgggagcacaagctgg
taggaaaacttaaatggtaattttggcaaattgctagaggctgagtgtggactagtttgagagtaagaaa
ttctcggnggcccagtctaggggaacctccacactttcgtgggctttacctccaggagtcccactagttt
ctcacagtgaagatccgagaaanttcgcttcacggctctggcagggggaggggaaaagcaatcattktga
aatacgcccagagtattctccgtaacaaactcttgccctacaggagaaaatactttgccagagccttatc
ctagctttagggaagggtaatcacccaactccagccccctctagccttcctgtctcacctaaagggagaa
aaaaagctaagaaacacttgtgaaggtcacagcccagggactcaggcccactaaaagactgagatttaat
cataggattatagaacgtttcccttccccmataccttaccaccacatcaacagggctccagtataataac
aatggattacagctgaaagaactgcaaaacmcagactctatttaagaaggagctnctagggaaacccaaa
gacaggagaggagacaaaaacaaggacaccggagtraagtttagcctctgacacctacagctacagcaaa
cagtaaacacagtctaactcttagccagataaacataaaacctcacattaaaggcctatttacttcagtt
ccttttacccagtacatcatgtccggctttcaacaaaaaattacaaggcatactaaaaggcaaaaaaaaa
aaacacagtttgaagagacagagcaagcatcagaaccagactcagatatgacagggatgttggaattatc
agactgggaatttaaaataactatgattaatacgctaagggctctaatggaaaaagtggacaacatgcaa
gaacagatgagtaatgtaagcagagagatggaaactctaagagaagaatcaaaagaaaacgctagaaatc
aaaacat
>L1ME1A_5|L1ME1A_5  Partial L1ME LINE1 repetitive element 5' end - a consensus.
cagacttccgattccggtaatggtggagtaagcccctaccggaccaaccctcccgcagaaaacaactata
aaacctggacaaaatacaaaaaacaactacttgaaggcactggagagtgaacaaaagcaggcagaaactg
gaggggagtcgacacttggaagaagggagcwgcacggagtgagttcccatttctgtggcttttagcctga
gagcaggccgcagttggtgcggcgtacagatggctaaaacwtcagtagaaaacccgcggtctttctggcc
tggagaaccagagaantgaatctagggcaaccacagccactggaaagagtggggaaaatcccggaaagga
gagagccagagagaggatccccaaattctgtgtataaactctgcccaaatctctggctgacccctgaacc
acgcatgcgcggagcagactcaaagcagcccagctaaagacaaaagatctgaactgagactggagctgcc
gcccaagaaacagagtttgcagttcgagtccagccaagataactgcctactaaaacaaaagaaacaacac
tcattagagaaaaataacagaatccagaatctccacaatktaacattcatgatgtccaggatacaatccc
aaaattatacmacataagaagaaacagraaaaatggaatncatccttaagagaaaagaaaatcaaatccg
accctgagatraaccagatgttggaattaacagacaaggattttaaagcarctattataactatnttcaa
tgaaataaaacaaaatatgctcacaatgaataaaaggataggaaatctcagcagagaaatagaaacgata
aaaagaaccaaatggaaattctagaamtgaaaaatataatatctgaaacaaaaaattcactgaatagact
taacagcagaatggagatgacagaggaaagagtaagtgaacttaaagatagatcaatagaagttatacaa
tgtgaagagcagagagaaaaawnatttawaaaaaaagwgmakagtctcacaaacatgttcgacaatatca
aatggtcnaacatanatgtaattggaatcmcagaaggag
>MER39|MER39  a consensus.
gggcattannnctgtaggggcagaaaggtgtgatnccttccctacccatcataagggtcacggcnnacac
tcctataataaaanayaggttagcaagagaaaagcataayagatttatttaatcaaagttttatgtgaca
tgrgagccttcagaaatgaagacmcaaakactcagggaaaactctatttttatgyttagatttgatgaag
aatgganagctgcgcagaaatgtgattrgacaaaaggggwatgatctaatggtmataractgrgtgtggr
aacccagcaaggcttgtctgttcgtattcttcttggtctmtctgtgcggcattccttcctcccgggtata
gggcgggaccccttctggaatgagggtcttatgacctacwatcagacgagataggtcagawaatttcttt
acggscagcycyaagacagaaaggcgggkrawgattagagggcnagagaaggtcagaaaatgannttctg
tttyctgaggnctgcttctgaggcttagagcgccccaacattntaacaaaagnctgtccntcacctttac
cgctctgaagctgttccaaagctgctacatgaaccaaggacaaaaagccanatanttcaacaaaagatat
ncttatngttttagtcactcaggaaacagcaaggcttataggagctgagaacccggaattatg
>MER39B|MER39B  MER39B - a consensus.
aagcagaataatggagaaaagcatatacatttatytaacatgtatacactgtatacacgggagccttcag
aatgaagacccaaagatacagggaaaattgtccatttttatgcttaggttcaacaaagaatggacagccg
tgtagaaatatgactggacaaaaaggcyatgatcyaatgctaatgagctgagtggggaaacccagcaagg
cctgtctgtctagattcttcttggcttctctgagcacgcattccttccggntatagggcggggccctctc
tggaatgggggtcttatgacctacaatcaaacaaggtaggtcagataatttctttatggccagtttttac
acagaaaggtggagggaaagttagagtaatatttttaggttttatggctggctttgsaggaaaggrgttc
tggtttctatgacctgccttggggaagagagattctagtttctatggctagcctcggggaggggagaatg
ggactgagagacaggagggcgggagaaggtcagagaaaaaytttgcttctgaggccttcattttgcggta
ttgttttctgagccccaacca
>MER34|MER34  a consensus.
ccatggnagrgaaggaaaaattttwcctctaccctcttagagtttccggctgggcccgataattaaactg
acataagacagattaacaggagaaaagcatacaaatttatttaagtatgttttacatgtacatgggagcc
ctcataaggaaatgaagacccaaagaagcggttagagtcgaacgcttwtatactaggttggacaaagagt
agtaaattgtgaaaacgtgacaagacaaaggggtttgggctagggcggttcatcgtggagaagtgactag
gaagatragrgttagtttaacaaggtttgttcgtacagatttccctcggcctcgactccccgtctctgac
gataagaatgtttccttcctcctggtatagagagaacgtctttcacatgggagttttatctcctgctttc
aggaagaaaagaggaaggtcagagtgctcttcttgcayctgctgtttctcaagtgcctttagctcaaaat
aatccttatgccaaagtggcatattttggggtggcatattctgatctccttcawta
>LTR29|LTR29  Long terminal repeat of endogenous retrovirus - a consensus.
tggccctctgaaggtttgctgaaaaatcaactgacaaaaggcagattaattartaggagaaaaggcatac
aaatttatttaacgtgtatacatgggagccttcagaatgaagacccaacttcccaatgaggtrcagaagc
ttatataccatcttgaggttacagaaagaatgggggcttggatcctggtaaaacaggttatgggaagggg
gagaagaggaattctattgaggggcaataaatgattactagggagaatgawtggatcttggatsrrggaa
cagaaattaacttgtaaatagttctctttggaatttaaatgatccttggagacaatgrtttgtgacaaaa
gtcattatcttgaaaaagggtctgttcaggtgtggttacattctttggtcttctttcctgyaatagattc
naatgagataaactcagggaggggaacaaaaaacaattgttctccttggtgggtctggactttaggcaga
taagggaacttcaacttatattngggagagacagtgggggntntggggggaggtcagagaaaccttgagg
cttcttcagttcagcatgtwcaaaacgccatattttggggtatcggtttctgagcccca
>MER98|MER98  MER98 repetitive element - a consensus.
gctccaggggtgggcacatgacccaggccgbaavtgcccagwcaccaatcagagatcccatcccctggcc
acgtgattggttcagggatgggcatgtgacccaagcyaggccaatgagartcaatcctgggacttttgct
ggaactattgggaaagagatactctttccactggggttgctaagctggtaggatgtaagcctggagctgc
tgggggccatcatatggaragagcctgcctgagaatgaagccaacacagagaaaagcagagccragagat
gtggagagagactgattcctgatgacatcatttgagcacctggatccagccatgcctgaactaaccctgg
acttttcagttactggccaataaattcyyttttttgcttaagcyagtttgagttgggttttgtcacttgc
aaccaaaagagtcctgactaatacacaggctgtctt
>MER68A|MER68A  Primate MER68 repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttcggtgattcaccaggaggactcatgggactcagcata
tagtcgtactcatagctatgatttattacagtgaaaggatacaaagcaaaatcagcaaaggaaaagacac
acgggcggagtccggaggaaaccaggcgcaagcttccaagagtcctctcccagcggagtcacacaggacg
tacttaattcctccagcaacgagttgtgacaacacatgtgaaacgytgtctaccagggaagctcattaga
gactcagtgccccggggttttcaytgggagctggtcacaaaggcastctctgcctagcacgtaccaaaat
tccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagtttaggcacag
tgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgccagccaag
ggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttttctgcac
agacactctncagatcacttt
>MER68B|MER68B  Primate MER68B repetitive element - a consensus.
tgtgtcgggggtcyccaagaycacttccaggttctgtgattcaccagaaggactcatgggactcggcata
gagtcgtactcatagctaagatttattacagtgacgtagtaaggatacaaagcaagatcacaaatggaaa
agacacacgggcggagtccggaggaatccacgcgcaggcttccttatgtcctctcccagcggagtcacac
aggacgtacttaattcctccagcaacgaaaatgtgacaacacatgtgaaacgytgtctgccagggaagct
cattagagactcagcaccccggggttttcagtgggagctggtcacaaaggcactctctgcctagcacgta
ccaaaattccagactcccagaaggaaagcaggtgttcagcataaaccatattgtttgtacaaacagttta
ggcacagtgagccactcttatcggttagggagtggtgggaaccctcccgaaatccaagttcccagatgcc
agccaagggccaaccttgcaagcaggtctttctaaggacggcagtctcaggcctgctgcgtyaactcttt
tctgcacagacactctncagatcacttt
>MER58A|MER58A  Nonautonomous DNA transposon; HAT superfamily.
caggggtcggcaaactttttctgtaaagggccagatagtaaatattttaggctttgcgggccatacggtc
tctgtcgcaactactcaactctgccgttgtagcgcaaaagcagccatagacaatatataaacgaatgggc
gtggctgtgttccaataaaactttatttacaaaaacaggcggtgggccagatttggcccatgggccatag
tttgccgacccctg
>MER58B|MER58B  Nonautonomous DNA transposon; HAT superfamily.
caggggtcggcaaactttttctgtaaagggccagatagtaaatattttaggctttgcgggccatacggtc
tctgtcgcaactactcaactctgccgttgtagcgcaaaagcagccatagacaatatataaacgaatgggc
gtggctgtgttccaataaaactttatttatggacactgaaatttgaatttcatataattttcacatgtca
caaaataytcttcttttgatttttcttccaaccatttaaaaatgtaaaaaccattcttagtttacgggca
gtacaaaaacaggcggtgggccagatttggcccatgggccatagtttgccgacccctg
>LTR16B|LTR16B  Primate LTR16B repetitive element - a consensus.
tgtggtggccatgaaaatgtgcctctcagatctcctgctgcagggagcatagttgactgacggccccagc
tgctgtccyttggratccaccactgcgtttgcaccaaggccacgcttccctcaggctactcccagccagt
gactgagcacggcaggggtgctaatgcaggcccgttcctgsnagatgcgggactcctccgacgggcaact
ttggctcgaggactcctcatcagcctggttgaaactttcttagaactgcactgcagtctgaggctcttcc
tacccaatccttcttccttccccctctcctttcacaggtgtcagacctgcatcatggtccgaagtctctc
ctngcccgctcctgctccctccccttttatctttcacaggntttcccctaataaatctcttgcacattta
accctgtcttggcgtctgcttctcagaggacctgaactaacaca
>MLT2F|MLT2F  Interspersed repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttagctaggctgaactacatttcccagaattctcttccctgcatg
tgttttcgggttagggtgggccacaagagacattcttgcgrgagatttggaaggcagaagtgaagcagca
gccattttgcagctcacacacgttgttgctgatctgctggctcatctcgttggcgtaaggcagcagccgg
gcctgcagctgctccaccttcccctggatcctccttcagcttctccgactcctgggccaggtgcgtgtgt
agrttagyctctgtgaaagggtgccagcttctgcaggacacccacatcatcaaggttgaggcagcgagaa
ctgacatgggttccagtttatcctcgtgggttccagtttgttcctgctttcccccactttacatccatct
tcccttcctgactgcctgccctgtggacttcaagctccagcaycagacacagaracaacagccttacawa
gactgtttaaccagctcccacaattgggtaaggtcaaatccctataataaatcyctttatatttaatcac
tcatactagtggttctgcttctctgattgaatcctgactgataca
>7SK|7SK  Human family A3 repeated element DNA; 7SK RNA pseudogene.
gatgtgagggcaatctggctgcgacatctgtccccactgattaccagggttgattcggctgatctggctg
gctaggcgggtctcctcttcctccctcagccctccatgtgtgtacctcctgaagcggactggtcttcagt
caagggtagacgagtagctgtgctcccctgctagaacctccaaacaagctctc
>XTR|XTR  Repetitive element X-2 from human alpha-fetoprotein gene.
ttaatttgagagaaattaattattctgcaacttagggacaagtcatgtctttgaatattctgtagtttga
ggagaatatttgttatatttgcaaaataaaa
>XBR|XBR  Xba repetitive element copy A, from human alpha-fetoprotein gene.
aattgataggtcacgttctcactctatttgcctttaagggaagaaagcaatcaagttaatatgttttcct
tcattgtatagtatgtaactacggacactattagaggagggatttgtgtagcacttaggacattatactt
gataatttccaagggtctttctagatttaaaagtctgattctaacgtagtaataaaaataaaggcccaat
tttctctttaatattgcctgaagatattactctattattgcattaaaattaaacattcacacattgtttg
cactgctaaataaaattatgtaa
>L1PB1|L1PB1  3'-end of L1 repeat (subfamily L1PB1) - a consensus.
ctaatatccagaatctataaggaactcaaacaaatcagcaagaaaaaaacaaacaatcccatcaaaaagt
gggctaaggacatgaayagacamttctcaaaagaagatatryaaatggccaacaagcatatgaaaaaatg
ctcaacatcactaattatcagggaaatgcaaatcaaaaccacaatgcrataccatcttactcctgcaaga
atggccataattaaaaaatcaaaaaataatagatgttggcgtggatgtggtgaaaagggaacacttytac
actgctggtgggaatgtaaactagtacaaccactatggaaaacagtatggagattycttaaagaactaaa
agtagaactaccatttgatccagcaatcccactactgggtatctacccarargaaaakaagtcattatay
gaaaaagayacttgcacacrcatgtttatagcagcacaattyrcaattgcaaaaatatggaaccaaccca
aatgcccatcaatcaayragtggataaagaaaatgtgrtatatatataccatggaatactackcagccat
aaaaaagaatgaaataatggcatttgcagcaacctggatggarytggagacyattattctaagtgaagta
actcaggaatggaaaaccaaacatyrtatgttctcacttataagtgggagctaagctatgaggatgcaaa
ggcgtaagaatgatacaatggactttggggactcgggagatcgggrgaaagggtgggaggggggtgaggg
ataaaagactacaaattgggtacagtgtacactgctcgggtgatgggtgcaccaaaatctcacaaatcac
cactaaagaacttattcatgtaaccaaacaccacctgttccccaaaaacctattgaaataaa
>L1MA2|L1MA2  3'-end of L1 repeat (subfamily L1MA2) - a consensus.
ytaatatccagaatmtataaggaactcaaacaaatcaacaagaaaaaaacaaataatccmattaaaaart
gggcaaaagacatgaayagacatttctcaaaagaagacatacaaatggccaacargyatatgaaaaaatg
ctcaacatcactaatcatcagagaaatgcaaatcaaaacyacaatgagatatcatctcaccccagttara
atggcttttattaaaaagacaaaaaataacaratgctggygaggatgtggagaaaagggaactcttayay
actgttggtgggaatgtaaattagtacarccaytatggaaaacagtttggagrttyctcaaaaaactaaa
aatagarctaccatatratccagcaatcccactrctgggtatatayccaaaagaaaggaaatcagtatat
yaaaragatacctgcactcccatgtttattgcagcactattcacaatagchaagatttggaatcaaccta
agtgtccatcaacrgatgaatggataaagaaaatgtggtacatatacacaatggagtactattcagccat
aaaaaagaatgaratcytgtcatttgcagcaacatggatggaactggaggtcattatgttaagtgaaata
agycargmacaraaagacaaacaytgcatgttctcacttatttgtgggatctaaaaatcaaaacaattga
actcatggagatagagagtagaaggatggttaccagaggctgggaagggtagtnggaggattggggggng
gkgrrgagggatggttaatgggtacaaaaaaatagttagaaagaatgaataagacctagtatttgatagc
acaacaaggtgactatagtcaataataatttaattgtacattttaaaataactaaaagagtataattgga
ttgtttgtaacacaaaggataaatgcttgaggggatggataccccattttccatgatgtgattattacac
attgcgtgcctgtatcaaaacatctcatgtaccccataaatatatacacctactatgtacccacaaaaat
taaaa
>L1MA5|L1MA5  3'-end of L1 repeat (subfamily L1MA5) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaataccgcatgttctcactcatatgtggaagctaaaaaagttgatctcata
gaagtagagagtagaatagtggttactagaggctgggaagggtagggrgaggggggratagggagaggtt
ggttaawggrtacaaaattacagttagataggaggaataagttctagtgttctgtagcaccgtagggtga
ctatagttaacaayaatttattgtatattttcaaatagctagaagagaggattttgaatgttcccaacac
aaagaaatgataaatgtttgaggtgatggatatgctaattaccctgatttgatcattacacawtgtatac
atgtatcgaaatatcacactgtaccccataaatatgtacaattattatgtgtcaattaaaaa
>L1MA9|L1MA9  3'-end of L1 repeat (subfamily L1MA9) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgatctcacttatatgtggaatctaaaaaagtcaaaytcata
gaaacagagagtagaatggtggttaccaggggctggggrakgggggaaatgggaagatgttggtcaaagg
gtacaaagttkcagttatgtargatgaataagttctrgagayctaatgtacagcatggtgactatagtta
ataatactgtattgtatacttgaaatttgctaagagagtagatyttaagtgttctcaccacanacaaatg
gtaactatgtgaggtgatggatatgttaattagcttgaytgtggtaatcatttcacaatgtatacatata
tcaaaacatcacgttgtacaccttaaatatatacaatttttatttgtcaattatacctcaataaagctgr
aaa
>MSTAR|MSTAR  MSTa-Mammalian LTR internal retrotransposon sequence - a consensus.
gaawattggtactgaggagtggagcattgctataaagatacctgaaaatgtggaagcgactttggaactg
ggtaacaggcagaggttggaagagtttggagggctcagaagaagacaggaagatgagggaaagtttggaa
cttcttagagacttgttaaatggttgtgaccaaaatgctgatagtgatatggacagtaagggccaggctg
acgaggtctcagatggaaatgaggaacttattgggaactggagcaaaggtcactcttgttatacattagc
aaagagcttggctgcattttgcccctgccctagagatttgtggaagtttgaacttgagagtgatgatcta
gggtatctggcggaagaaatttctaagcagcaaagcgttcaagatgtgacctggctgcttttaacagctt
acagtcatatgcgagagcaaagaaatcacttaaagttggaatttatatttaaaagggaagcagagcgtaa
aagtttggaaaatttgcagcctggccatgtgatagaaaagaaaaacccgttttctggagagaaattcaag
caggctgcggagcgaccgtttgctaaagagattagcataactaaaaggaagccaagtgctgatagccaag
acaatgggaaaaaggcctcgaaggcatttcagaaatcttcgaggtggtccttcccatcacaggcccagag
gcctaggaggactgaatggtttcgtgggccaggcccagggccccgctgccctgtgcagcctcgggacact
gctccctgcatcccggctgctycggctccagccgtggctcaaagggccccaggtacagctcgagctgccg
cttcggagagtgcaagctataagccttggtggcttccacatggtgttaagcctgcaggtgcacagaatgc
aagagtgaaggaggcttggcagcctccacctagatttcagaggatgtatgggaaatcctgggtgcccagg
cagaagcctgctgcagggacggagccctcacagagaacctctactagagcagtgccaaagggaaatgtgg
ggttggagcccccacacagagtccccaccggggcactgcctagtggagctgtgggaagggggccactgtc
ctccagaccccagaatggtagagccactggcagcgtgcaccgccagcctggaaaagccgcaggcatcaga
ctccaacccgtgagagcagccacgtgggctgtgcccagcaaagccacaggggcggagctgcccaaggcct
tgggagcccacccctcgcaccagcgtgccctggatgcgagacacggagtcaaaggagattattttggagc
tttaagatttaatgactgccctgctgggtttcggacttgcgtggggcctgtagcccctttcttttggccc
atttctcccttttggaatggaaatatttacccaatgcctgtaccaccattgtatcttggaagtaaataac
ttctttttgattttacaggctcataggtggaaggaacttgccttgtctcagatgagactttggactttgg
acttttgagttaatgctggaatgagttaagactttgggggactgttgggaaggcatgattgtattttgca
atgtgagaaggacgtgagatttgggggaaccaggggcagaa
>MLT1R|MLT1R  MLT1-Mammalian LTR retrotransposon internal sequence - a consensus.
gattttggcactaggaagtggggtgcttacgtaacaaatacctaaaaatgtggaagcgactttggaactg
ggtaataagtagaggctggaagagttttgaggtacatgytagaaaaagcctagatttccttgaagagact
gttggtagaaatatggatattaaaggyaattctggtggggggctcagaaaggaagwggagagctatagag
aaagctcccgtcgtcttagagaatacaaaaatcgtcatgaacagaatgttgctagaaatatgaatgttaa
aggtgcttctggtgaggtctcagacggaaatgagggagatgttattgaaaattggaggaaaggtgatcct
tgttataaagtagcaaagaacttggctgaattgtgttcatgtcctagggctttatggaaagtagaacttg
yaagtgatgaactkggatattcagctgaggaaatttctaagcaaagtgttgagggcgcaacctgacttct
cctaactgcttatagtaaaatgtgagagacataaagatggaantgttgagtaaaaaggaaccagaacgta
aagatttggaaaattctcagcctgatcatgtaacagaaannncaatagcgttctctggaaagaanaccaa
ggatgtnnccgngcaaccgtttgctaaagagattagratcgtgactcgtgggtccaatcaaccatctcag
caraarccargaatagagatgrggttatttaggaaatatctgtggaggactctcttatctgatggctcga
acccctatgacttncataggagaccgacaaggnttttgagaatnttacaccagcagaaacactgccaact
tggactraagggracagagacgagaaaaaatgaaggaagrgtggcagaccgaaggtggggctgtctcgtt
tcagagcatggkgtcaccccagcgggcccggaagatgaatctcaggactcagaggcattagcctccagcc
ttaagatctaatgaagtttgccctgctgggttttggacttgcttgggaccngtgactcctttcttyyytt
cyatttctcccttttggaatgggaatatctatcctatgcctgycccaccgttgtattttggaagcagata
acttgtttnattrcacaggtccacagatggagaggaattttgccyctgaatgaatctyaccctgagtytc
tnccayacytgatgyrgrtgatatttcgctgagattgtggactaagagttggtgctggaaggggttagac
attggggagatgttgctatgggatgcagggattttgcatgtgagaaggacatgattatggggggagcgga
gggcaaac
>MER3|MER3  Nonautonomous DNA transposon.
cagcgctgtccaatagaactttctgtggtgatggaaatgttctatatctgcgctgtccaatacggtagcc
actagccacatgtggctaytgagcacttgaaatgtggytagtgcgactgaggaactgaatttttaatttt
atttaattttaattaatttaaatttaaatagccacatgtggctagtggctaccatattggacagcgcag
>MER5A|MER5A  a consensus.
cagtggttctcaaagtgtggtccccggaccagcagcatcagcatcacctgggaacttgttagaaatgcag
attctcgggccccaccccagacctactgaatcagaaactctgggrgtggggcccagcaatctgtgtttta
acaagcyctccaggtgattctgatgcatgctcaagtttgagaaccactg
>MER21B|MER21B  a consensus.
tcaacacacaacacttctgtcaccaaacgtgtggrrrtttttccccacacacaaacaaktcttcagttct
gcggcggacaccarctgggtgtcctccaattcarttcagttctgacactawctacctrgagatagcgtca
gatcccacaggtttaagggctcagtcccacaagactgcccccacttcagatrccagtcgcaagtctrggt
tktcacccgtacttctgaccaactggctataaattgttcccacgacccctctttaggttcgattaatttg
ctagaatrgctcacaraactcagggaaacacttatatttaycggtttattataaaggatattacaaagga
tacagatgaacaaccagatgaagagatrcatagggcgaggtmtgggagagtccngggnncaggagcttcc
gtgccctctctggstnnrccaccttccwggcacctccacgtgttcaccaacccggaagctctccgaaccc
tgtccttttgggtttttatggaggcttcattacgtaggcatgaytgattacatcantggccattgattat
caactcaacctycagcycctctccyctccccagaggttggagggtggggctgaaagttccaaccytctaa
tctgccttggtctttctrgcgaccagcycccatccwgragcntnctaggggctgcccrccakgagtcgmc
tcattagmacaaaagrncrtynctattacccaggarattccaagggttttaggagytctgtgtcaggaac
cggggtcaaagaccaaatattagat
>TAR1|TAR1  Human telomere associated repeat sequence, complete sequence.
gatcaacagtgaggaggtcccacaaggctaagtggggcaagtcggggacctaaggcagtagcaggaaaac
caaagaaaacaggcggagacttgagacagaggcaggaatgtgaagaagtccaaaataaaaatccctgcac
aggactcttaggctgttatcatgcactatcagcctactcctccctatttttgtacaataagctctttaca
ctgtatttcttttcaatgaagttatcttccatctttgtactgcctcttggtgaaaagctgtcttccaagt
taataactgggacatcagctctctgcagtaatagctccttttcagttttaatttgcagaactgatgggga
ttaataactggcgctctgactttaagtggtgcaggaggcggccagtaggggacgccagccgttacgccgg
gagcaagagggccctgcgtagtccccatctgcctgcatgtggcgtgcagccacgacaatggcagcaagag
ggcccggcagtgtgcccagctgccagcaggcgggtgtgctgccactataatgtgaggaagagggccctgc
aatgtccctagctgccagcaggcggcgtgccaccactatactgcgagcaagagagccctgccgtgccccg
gcgccagcagggggcgctggacagcactgtaagcaagagggccctgcagttgtcctagtcgccagtaggg
gacgcaatggcagagcaccgtgggcaagctggtcctgtagtgcccggctgcaagcagggggcgcccgaaa
cgggcttttcagattactcaggttccactcgtctctgcgccgccggggacgtgtgtctctgcgcgtgcac
cgcgccacccccgcgctccccgcccggcggcgcgcgactgtgcgactgcaacactccccgccaccctcag
cccagcgacgtgcgtctctgcgcctgcgccgcgcctcactcccgcccgctcagcgacccctcccttccgg
ggaggcgccggcgtgcgtctacgccctgcgccgcgtctccccaacagcggcgcgcctctctgcgcctgcg
ccggcgcgccgcgcctctctgcgcctgcgccggcgcgccgcgcctctctgcgcctgcgccggcgccccgc
gcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgc
ctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgc
cccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctc
tgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgcc
ggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgc
ctctctgcgcctgcgccggcgccccgcgcctctctgcgcctgcgccggcgccccgcgcctctctgcgcct
gcgccggcgcgccgcctttgcgagggcggagttgcgttctctttagcacacacccggagagcatcgcgag
ggcggagctgcgttctcctctgcacagacttcgggggtattgcgaaggcggagcagagttcttctcaggt
cagacccgggcgggcgggctgagggcactgcgagggtggagctgcgttctgttcagcacagacgtggggg
gcaccgtaaaggcggagcagcattcttctcagcacagacgttgggggtactgcctgcctttgggataact
cggggccgcatcgagggtgaataaaatctttcccgtttgctgccctgaataatcaaggtcagagaccagt
tagaacggtttagtgtggaaagcgggaaacgaaaagcctctctgaatcctgcgcaccgagattctcccaa
ggcaaggcgaggggctgtattgcagggttcaagtgcagcgtcagaactcaaatgcagcattcctaatgca
cacatgacaccctaaatataacaggcatattactcatggagggttagggttcaggttcgggttcgggttc
gggttcgggtt
>HERVL|HERVL  Internal part of endogenous retroviral element HERV-L.
[encoded data, 5750 characters]
>HERVH|HERVH  Internal part of endogenous retrovirus RTVL-H (HERV-H family).
[encoded data, 7810 characters]
aagaaggcaggaa
>HERVKC4|HERVKC4  Internal part of human endogenous retrovirus HERVK(C4).
[encoded data, 5325 characters]
gggaggggggca
>MER60|MER60  5' part of L1M subfamily.
tgcagrttgctagtgccagagggagcaaagaattgtgattgtggattttaattgctggcagctccctgaa
ggactcacaagtctttttttctcggctgaagtggttcaaaaacatttaaaggcacatttgctggagcaag
ggacaacatgrgrcaagcaayagatagaccaaaaagcctaagaaggaagagmtgagaaataagatgcttg
gggaaawaagggctttgaaaagtccacatattcctgggaatctagaaggccatgcacatgtccagggctg
gacacatgctcagaaaagacctaagaaggccctaagctttcacctctggctgaccttnagactctgtaca
agcaggaagtgaaggctaaggcagagttgtaaactgccttggctgagtgttgaaggaatgccycaacaca
cagmcaatctgcaaagactaggagactttttttttgtgtttggtddtkttgttgttrttccaggtattta
aggaaayctctgtcaawyactagctgaccactaagctaaycgarcagagacttcagtggccacacatgac
aaagaatacagactttacaaaattagtttagaaaagtcactaaacaaacaayacaacagcamayaayaag
caacaacaacaaaccctggaaaggggagagaatctgatttccagagttgccacattatawtatttaaaat
gtccagttttttttttcaacarcaacaaaaattatgaggcatacaaagaaacaaagaaaagtatggccca
tacacaggaaaaagaaattaatagaaactatccctgaggaagcccagacattgracttactagacaa
>HERVS71|HERVS71  Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 5538 characters]
gtcatcctcaccacgccgatggctctgaaag
>L1M3_5|L1M3_5  L1M3/4 LINE1 repetitive element 5' end - a consensus.
agagcaagatggcagaacagaatgctcnaacaattgcccccatyctryyccnccacaggaacaccaaatt
gaacaactatctacacaaaawagcaccttcataagaaccaaaaatcanntaagcgatcacagtacctggt
tttaacttcatatnactgaaagaggcactgaagagggtaggaaagacagtcttgaatcgccaacgccgcc
cctcccccatcccccggcagtggccgcacggcacggagagagaatccgcgcacttgggngagggagagcg
cagcgattgtgggactttgcgttggaantcagtgctgccctgtcanagcggaaagcaacancgggcagaa
ctcagccggcgctcatagagggancatttagaccagccctagncagaggggaatcacccatcccagcggt
cggaacctaagttccggcaagcctcgccaccgtgggctaaagtgcnntagggtcctaaataaacttgaaa
ggcagtctaggccacaaggactgcaattcctgggcaagtcctggtgctgtgccgagctaagagtcagtgg
acttagggggcacacgacctagtgagacacyagccggggtggccaagggantgcttgcgccacccyctcc
cycaacnccaggcagcacaactcgcagctccgggagagactccttccctccgcttnaggagaggagaggg
aagagtaaagaggactttntcttgcaantcggataccagctcagccatagtaggatagggcaccgagcag
agtnnwgaggycccnattctaggccctagctcccggatgacatttctaaacacaccctgggccagaaggg
aanctgctgccttaaagggaagganccagtcctagcaggantcatcacctgctgactaaagagcccttgg
gccctgaataatcagcagcgatacccaggttagyactcgccgtaggccttgggtgagantctgagacgtg
ctggnttcaggtgtgacncagcacattcccagctgtggtggctacggggagagactccttctgcttgaga
aaaggagagggaanagtaaaggggactttgtcttgcagcttagntaccagcttggccacagtggagtaga
gcaccaagcgggctcttagggtccccgattccaggccttggctgttggatggcatttctggacctgccct
gggccagaggagagcccactgccctgaagggagagtctcaggcctggcagcattcaccgcaagctgacag
aagagtccttgggctttaagtgaacattkgcgrtagycaggcagtacttnctgtgggcctgcggcggtgg
tngccatagggagagnctcctctgcttgtngaaaggggagggaagagtgggaagaactttgtcttgtggc
ttgagtgccagctcagccgcagtagaacagagcaccgggtagatttctaaggtttccgactccaggccct
ggctcctggatagcatcyctggacgtgcccggggccagagagaactcaccaccctgaagggaaggataca
agnctggctggctttaccacctgctgattgtagagtcccggggccttgagcgaacataagcagcggccag
gcagtggttactgcgggccttgggcgagacccagtgctgtgctggcttcaggtctgaccyagtacagtcy
cagtgrtggtggccacaggggtgcttgtgtcacccctccyccagctccaggcagctcagcacagagagag
agacngagtttgtttgrgggaaagtaarggaagagaacaagagtctctgcctggtaatccagrgaattct
tccagatcttatccaagaccacnaaggcagtacctctacgagtctgcaagagccacagtattactgggct
tggggtgccccctaatgcagatacggccgcagtgacaaaaaacttagatcacaacacycaagtcccttca
aatacctggaaagcyttcccaagaaggacgggtacaaacaagcccagactgtgaagactacaataaatac
ctaactcttcaatgcccagacacagacaaacatctacaagcatcaacaccatccaggaaaacatgacctc
accaaatgaactaaataaggcaccagggaccaatcccggagaracagagatatgtgacctttcagacaga
gaattcaaaatagctgttttgaggaaactcaangaaattcaagataacacagasaaggaattcagaatyc
tatcagataaatttaacaaagagattgaaataattaaaaagaatcaagcagaaattctggagctgaaaaa
tgcaattgacatactgaagaatgcatcagagtytcttaacagcagaattgatcargcagaagaaagaatt
agtgagcttgaagacaggctatttgaaaatacgcngycagaggagacaaaagaaaaaagaaaanaatgaa
gcatgcctacaagatctagaaaatagcctcaaaagggcaaatctaagagttagtgaccttaaanaggagg
tagagagagagataggggtraaagtttattcaaagcnataataacagagaatgtcccaaacctagagaaa
gatatcaatattcaagtaaaagaagnttatagaataccaagcanatttaacncaaagaagactacctcaa
gacatttawtaatcaaactcccaaaggtcaaggataaagaaaggatcctaaaagcagcaagagaaaagaa
acaaataacatacaatggagcnccgatatagtctggcagcagacttntcggcggaaancttacaggccag
gagagagcggcatgacatatttaaagtgctgaagaaaaaaaaaaaaactttnatcctagantagcgtntc
cagngaaaatatccttcaaacatgaargagaaataaagactttcccagacaaacaaaagctgagggattt
cntcaacaccagacctgtcctacaagaaatgctanagngaattcttcaatgtgaaagaaaaggacgttaa
tgannaataanaaatyatctgnaggtrcaaaactcactgataatagtgcgcagaaaaacanaatattata
acantgtaattatggtgtataaactactcttragtagaaagactaaaagatgaaccaatcaaaaatanta
actanaacaacttttcaagacatagacagtacnntaagatanaaatagaaacaacaaaaagtttaaaaat
tggnggacgaagttaaaatgtagagtttttattagttttcttnttgttnnttgrtttttttnaanttatg
taatnagtgttattatcagtttaaaatataggatattatttgcaagcctcatggtaacctcaaatcnaaa
aacatacaacggatacacaaaaataaaaagcaagaaattaaaacatatcaccagagaaaatcaccttcac
taaaaggaagacaggaaggaaggaaagaanaaagagaagaccacaaaacaaccagaaaacaaataasaaa
atggcaggagnaagtcattacttatcaataataacattgaatgtaaatggactaaactctccaatcaaaa
gacatagagtggctgaatggatataaaaataagacccaatgatcggtcgcctanawgwaacacacttcac
ctataaagacacakatagactgaaaataaagggatgaaaaaagatatttcatgcnaatggaaaccaaaaa
agagnaggagtagctatacttayatcaganaaaatatatttcaagacgaaaactataagaagagacaaag
aaggtcactatataatgataaaggag
>L1MA10|L1MA10  3'-end of L1 repeat (subfamily L1MA10) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaagcagagagtagaatggtggttgccaggggctgggggragggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
ataatactggattgtacacttaaaawttgttaaaagrgtagatctcatgttaagtgttcttatcgcacaa
caaaaaaatggggaacttttggrrgtgatggatatgttcattatcttgattgtggtgatggtwtcacggg
tgtntacatatgtcaaaactcatcaaattgtacacwttaaatatatgcagtttttagtgtataattatac
ctcaacaaagctgttttaa
>L1MB3|L1MB3  3'-end of L1 repeat (subfamily L1MB3) - a consensus.
ttaatatccaaaatatataaggaactcaaacaactcaacaagaaraaaacaaataacccaattaaaaaat
gggcaaargacctgaatagacatttytcaaaagaagacatacaaatggccaacagatatatgaaaaaatg
ctcaacatcactaatcatcaaggaaatgcaaattaaaaccacaatgagatatcacctcacacctgttaga
atggctattatcaaaaagacagaaaataataaatgttggygaggatgtggagaaaagggaactattgtac
actgttggtgggaatgtaaattagtayagccaytatggaaaacagtatggaggttcctcaaaaaaytaaa
aataraactaccatatgatycagcaatcccactwctgggtatatatccaaargaattgaaatcagtatgt
ygaagagatayctgcactcccatgtttaytgcagcaytattcacaatagccaagatatggaawcaaccta
agtgtccatcaayggawgaatggataaagaaaatgtggtatatatacacaatggaatactattcagccat
aaaaaagaatgaaatcctgtcatttgyarcaacatggatgaacctggaggacattatgctaagtgaaata
agccaggcacagaaagacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaacgccactgaactgtacgcttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaaaaaaa
>L1MB7|L1MB7  3'-end of L1 repeat (subfamily L1MB7) - a consensus.
cttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatttgaatagacatttctccaaagaagatatacaaatggccaataagcacatgaaaagatg
ctcaacatcattagtcattagggaaatgcaaatcaaaaccacaatgagataccacttcacacccactagg
atggctataattaaaaagacagacaataacaagtrttggcgaggatgtggagaaattrgaaccctcatac
attgctggtgggaatgtaaaatggtgcagccactttggaaaayagtttggcagttcctcaaaaagttaaa
catagaattaccatatgacccagcaattcyactcctaggtatatacccaagagaawtgaaaacatatgtc
cacacaaaaacttgtacacgaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaactgatgaatggataaacaaaatgtggtatatccatacaatggaatattattcagccat
aaaaaggaatgaagtactgatacatgctacaacatggatgaacctcgaaaacattatgctaagtgaaaga
agccagacacaaaaggycacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctgggggraaggggaaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctaaaattagatagtggtgatggttgcacaactytgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaarctataa
>L1MC2|L1MC2  3'-end of L1 repeat (subfamily L1MC2) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatccaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catactcttaccatatgatccagcaatcayactccttggtatttacccaaatgaattgaaaacttatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaagaaatgaactatcgagacatgaaaagacatggaggaaccttaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtatgattccaactatatgacattctgaaaaaggnaaaactatgg
agacaagtaaaaagatcagwgattnctagagkgastrggarrgggagggaagaataggtggagcncaggg
gatttttagggcagcgaaactattctgtatgatactataatggtggatacatgacattatacatttgtca
aaayccatagaactgtacaayacaaagagtgaaccctaatgtaaactatggactttagttaataataatg
tatcaatgttggttcatcaattgtaacaaatgtaccacattaatgcaagatgttaataatagggtaaact
rttgtgtgggggagggagtatatgggaactctctgtactttctgctcaatttttctgtaaacctaaaact
gytctaaaaaataaagtctattaataa
>L1MC3|L1MC3  3'-end of L1 repeat (subfamily L1MC3) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgawacyactatatacgt
atannaraattaaacaaataagtaaatgtatkgtagatgatgggagccaggtttctcactgtcggagtga
ggagttacagataagcaaagggaggagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccgctgagagggccta
gaagcaacgacaccccagtagcaatgagcacacctagcacccagatcttggtttctaataccattctcca
ataaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatatacaagatgag
cctggaacatcttgcartgccagaaaataaggaagtgctcaaaaacacaatgatrggggtatgtcaaagg
gacacagragccaactgaaagagctcccaatggccaaagctggaacaatttgagcaacaaaataaattat
rgtagtattggattataacycaaagtataaaataaatatccatgagtccatactgatataaatgaatgat
taaataaataaataaattgagaagataaataagtctctnntgcagaagaatttcaaataatttatgtaga
tarcctnccctcaaggaagtggagcgtaactccccactccttaagtgtgggatggatatagtgacttcct
tccagaaagcatagtataggacggaaaaaaaagtaaatttacwgtagagaaacctgacaaacactacctt
agccaggtaatcaaagttagcatcaacaattgtaagtcatgttgatagyatatacccttgatatgatgtg
ataagaatggcacttcacctccgtggtcttcctcccaaaaacccataaccccagtctaatcatragaaaa
atatcagacaaattccaactgagggacattctacaaaatacctgaccagtactcctcaaaactgtcaagg
tcatcaaaaacaaggaaagtctgagaaactgtcacagccaagaggagcctaaggagacatgacaactaaa
tgtaatgtggtatcctggatgggatcctggaacagaaaaaggacattaggtaaaaactaaggaaatctga
ataaagtatggactttagttaataataatgtatcaatattggtttattagttgtgacaaatgtaccatan
taatgtaagatgttaayaataggggaaactggatgtggggtatatgggaactctctgtactatttttgca
actttcctgtaaatctaaaactatttcaaaataaaat
>L1MC4|L1MC4  3'-end of L1 repeat (subfamily L1MC4) - a consensus.
cttgtatccagaatatataaagaactcttaaaactcaacaataaaaaaacaaacaacccaattaaaaaat
gggcaaaagatctgaatagacatctcaccaaagaagatatacagatggcaaataagcacatgaaaagatg
ctcaacatcatatgtcattagggaaatgcaaattaaaacaacaatgagataccactacacacctattaga
atggctaaaatcaaaaacactgacaacaccaaatgttggcgaggatgtggagcaacaggaactctcattc
attgctggtgggaatgcaaaatggtacagccactttggaagacagtttggcagtttcttayaaarctaaa
catacaattaccatatgatccagcaatcayactcctaggtatttacccaagtgaattgaaaacwtatgtc
cacacaaaaacctgcacacgaatgtttatagcagctttattcataattgccaaaacttggaaacaaccaa
gatgtccttcaataggtgaatggataaacaaactgtggtacatccatacaatggaatattattcagcgat
aaaaaggaatgaactactgakacatgaaaagacatggatgaatctyaaatgcatattgctaagtgaaaga
agccagtctgaaaaggctacatactgtacgattccatttatatgacattytggaaaaggcaaaactatag
agacagaaaacagattagtggttkccagrggttgagagatgggaagtggggatgrytgcaaargtaaagc
acargggattttttagggtgrtaaaactattctgtataaactattctgtatgatactatggtggtggata
cacgacantatgcatttgtcaaaacccacagaacttgtcaaaacccacagaactttacagcataaagagt
gaactttaatgtatgyaaattttaaaaaatcatttargagatcgggggatcycaggatggaatacagamt
gtgacaaaagaatctaactgtattacaaatgtatgaaacaacctcactgaagggratgggggaaaaaggt
gctgacctaagtaactttggaaatgagtggagtctgtaagactaaaggcaaaaggaactgcacataagca
ctgtactctagttrataaagttgtttyccayaggggtayaggttaacaattctgaaactattttatatgt
attgtaggattgagcaaataagtaaacgcattgaagataatgggagccaggtttctcactgtcggagaag
ggagttacaaatatggaatgggggaagrctagaatgaaccctgtggtattrgattagaattggaggtatc
agtatgaactcatgrtttttaatatayryryryryryryrtttcctagttctgtccactgagagggccta
gaagcaatgacaccccagtagcaatgagcacacctagcgcccagatcttggtttctaaataccattctcc
actaaaaggaaccagggctccttggagaaatggctgattctaggactagggcaggaaatgtacaagatga
gcctggaacatcttgctrtgccagaaaataaggaagtgctcaaaaaatgatrggggtatgtcaaaaggac
acagragccagcttgaaggggctcccactggccaaatctgggacaatttgagcatcaaaataaataacgg
tagtaatggattataactcattgaataaaataaatatccatgagttcatactaatataaataaatgaata
aaagaaataaataaataagaragaaaggaaagytcttcttacagtagaatgccaactaayaaatgtagaa
ggaataaaataatagaaaaatcaccatttggcaaayaccacagtaataantgtttcaggcaagaaccatc
gatagatgctaaaattagtgggcgaaartttgatgagaaacgggatatttgcatagtctcaaagtatctc
yccacaagatatttattaattayaaagggaaaaatagtractttacagtagagaaacctggcagacacca
ccttaaccaagtgatcaaagttancatcaccaataatgagacaaattgacatcatgcgcytcctgatgtg
atgcgccgagaaggacacaacatcacttctgtgatattcytgccaaaaatgcataacctgaatctaatca
tragaaaatatcagacaaacccaaattgagggacattctacaaaataactggcctgtactcttcaaaaat
gtcaaggtcatgaaagacaaggaaagactgaggaactgttycagattgacggaagactagagacatgaca
actaaatgcaacgcgtgatcctggattggatcctggatcgagaaacggtgggagtttktayctataaagg
acattattgggacaattggcgaaatttgaataaggtctgtagattagataatagtattgtatcaatgtta
atttcctgattttgataattgtactgtggttatgtaagagaatgtccttgtttttaggaaatacacactg
aagtatttaggggtaaarggncatsatgtctgcaacttactctcaaatggttcagraaaaaaaatnnata
tayataaryagagaatgataaagcaaatgcggcaaaatgttaacaattggtgaatctgggtgaagggtat
acgggwgttctttgtactattcttgcaacttttctgtaagtttgaaattatttcaaaataaaaa
>L1MD2|L1MD2  3'-end of L1 repeat (subfamily L1MD2) - a consensus.
cttgtatccagaatatataaagaactctcaaaactcaacaataaaaaaacaaacaatctaattaaaaaat
gggcaaaagacatgaagagacatttcaccaaagaagatatacaaatggcaaataagcacatgaaaagatg
ttcaacatcattagctattagggaaatgcaaattaaaaccacaatgagatatcactacacacctattaga
atggctaaaataaaaaataatgacaayaccaaatgctggcgaggatgtggagaaactggatcactcatac
attgctggtgggaatgtaaaatggtacagccactctggaaaatagtttggcagtttcttataaagttaaa
catacamttaccatatgacccagcaattayactcctaggtatttatcccagagaaatgaaaacttatgtt
cacacaaaaacttgtacacgaatgttyatagcagctttattcataatagccmaaaactggaaacaaccca
gatgtccttcaacgggtgaatggttaaacaaactgtggtatatccatacmatggaatactattcagccat
aaaaaggaatgaactattgatacatgcaacaacctggatgaatctcaagaacattatgctgagtgaaaaa
agccagtctcaaaaggttacatactgtatgattccatttatatarcattcttgaaacgacaaaactatag
agatggagaacagattagtgrttgccaggkgttagggatrcaggraggaggtggatgtgrytataaarrg
gtagcatgagrgaatytttatggtgatggaacwgttctgtatcttgaytgtggtgrtggttacacgaatn
tatacatgtgataaaattgcatagaactaaatayryryryrataagtacaagtaaaactggcgaaatctg
aataagatwnatggrttgtaycaatgtcaatwtcctggttktgatattgtaytatagttttccaagatgt
taccattgggggaagctaggtgaagaacacacgggatcccyctgtattatttcttacaattgtntgtgag
tktayaattatttcaaaataaaaagtttaatttaaaaa
>L1ME2|L1ME2  3'-end of L1 repeat (subfamily L1ME2) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctcaaaaagttaaa
cacgcacctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacttgtacaagaatgttcatagcagctttattcataatagccmmaaagtggaaacaaccca
aatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatattactcagcaat
aaaaaggaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgtatgattccatttatatraaattcwagaacaggcaaaactaatc
tataatgntagaaatcagaatagtggttgcctctggkgagggtraatgactggraagggrcatgagggaa
ttttctggggtgatggaaatgttctatatcttgatcggggtggtggttacacgagtgtatacatttgtca
aaactcatcgaactgtacacttaaaatctgtgcattttactgtatgtaaattatayctcaattttaaaaa
a
>L1ME3A|L1ME3A  3'-end of L1 repeat (subfamily L1ME3a) - a consensus.
cttgtatccagaatatataaagaacgcctacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagacttgaataggcatttcaccaaagaagatatacagatggccaataagcacatgaaaagatg
ctcaacatcattagtcatcagggaaatgcaaattaaaaccacaatgagataccacttcacacccactaga
atggctaaaattaaaaagaccgacaayaacaagtaytggcgaggatgtggagcaactrraactcycatac
attgctggtgggaatgtaaaatggtacaaccactttggaaaayagtttggcagtttctacaaaagctaaa
cacgcgcctaccctatgacccagcaattccactcctaggtatttacccaagagaaatgaaaacatatgtc
cacacaaagacatgtacaagaatgttcatagcagcattgttcataatagccaaaaagtggaaacaaccca
gatgtccatcaacaggagaatgaataaacaaattgtggtatatccatacaatggaatactactcagcaat
aaaaatgaatgaactaytgatacacgcaacaacatgaacgaatctcgaaaacattatgttgagcgaaaga
agccagacacaaaagantacatactgnntgattctatttgcataaaatacaaaaccaggcaaaactaatc
aatgntgttagaagtcaggatagtggttgttctgggaatagtaatgactgtaaggrarcatgagagggct
ttctggggtgctggtaatgttctgtttcttgatctgggtgctggttacacggctgtgttcartttgtgaa
aattcatyaagctgtacacttatgatwtatgcayttttatgtatgtatattatayytcaataaaaaaaa
>MER63C|MER63C  Primate MER63C repetitive element - a consensus.
ccagtggtgtgctggtaaatgtttaacaactggctctctgggggaggwaatgymtkgatttgtgtattca
catatataagtttattataaattttactgatataaaggacgtrtagcacacaatttacaaataacaataa
aatatacaatattctttattgtaaattccatatagccagttgattctcacagaatgctttcgttgatttt
tgcccaaactcttgtatccgtagccgaactatgtttgtaattgacgaacaagtgtagttcnaacatgaat
gttggttgatattttcgtttatgttaatgagtaagatgaaagtgaaacaacgaagacgtatgtcagaact
tcactcatttgtcaatgatgtgagtgacttctttgctgaatcggatggtagttttcaaacattagaagaa
tattttctcaatttttggtgctattcgcaatgtaacagctacagacatgacacacttttaagtttaatct
gcatcattaacattttctccatcactttcttaagtctagacaatcaacaaaacaataaatcaagccctga
tttgtagcgtttgccgatttccgtggtgtaaatactcccaccgtggccgatttcaagctaccagcgtgat
gtcactgaatgsggagttgggaagagatgcacagtagcacacyattatatagtatttccaccatacagat
acaatagacgtaaataacctcaagagcatagataatagtaaaatgtagtaaaataattaggaagtgatga
gttttgagtatttattacctttgtttttaatataatttatttaattgtaagtttatataatttaaatttc
tttgtttttaatataatttatttaattgtaagtttatataatttaaatttcaatcggctctcgcgagccg
atacgagccagctccagcacaccactgg
>MER65A|MER65A  internal sequence MER65I belongs to the MER4I-group; subfamily MER65A.
tgtgaaagttgtcagaatcaaaatggagtcacttatgttaaaaaccctaacaaayagagccggggaaggc
catgaagagagggttctcacgcwcatatgcctgataacaagaactatcacaaaagactgcaaaaaccaca
accttgcacaaaggccatcacaaccttacacanaaaaatacttctacgaggacatctgcccagcaactgc
ctgtccaacctcggactggcgtcacccttgttattgatccttgtagccaaggataattatctcaaaacaa
ttatgtaatcctcctcatttttcctttaaaaacctttgtcttcctttacctccctgaatatgcacatagt
ttactatggcacgcgtattcccattgcaatgctctattcccaaataaatatcattttcttttagagagcc
tctctgtttgttatttaggttgaca
>MER68A|MER68A  Primate MER68 LTR element - a consensus.
tgtgcagaaaagagttaacatagcaggcctgagactgctatccttagaaaggcctgcttgcaaggttggc
ccttggctggcatctgggaacttggatttcgggagggttcccaccattcccwkaactgataagagtggct
cactgtgcctaaactgtttgtgcaaacaatatggtttatgctgaacacctgctttccttctgggagtctg
gaattttggtacgtgctaggcagagggtgcctacgtgaccagcccccartaaaaaccctgggcactgagt
ctctaatgagcttccctggtagacaacatttcacatgtgttgtcacaactcgttgctgggggaattaagc
gtgtcctgtgtgactccactgggagaggactcttggaagcttgcgcctggtttcctccggacttcgcccc
atgcgccttttccctttgctgattttgctttgtatcctttcgctgtaataaatcatagccgtgagtatga
ctatatgctgagtcctgtgagtcctcctagcgaatcaccgaacctgggggtggtcttgggaacccctaac
aca
>MER69A|MER69A  Primate MER69 repetitive element - a consensus.
ccagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcataggccccttc
caaggccctgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgt
ataagcttcaggccccacaaaacctggatctgcccctgg
>MER69B|MER69B  Primate MER69 repetitive element - a consensus.
cagaggcagatttaccgtgaagctaatgaagcttaagcttcagggcccctcacttgcacgggccccttcc
aaggccctgggaggggccctagcaatgtgttcacatggtcatatgtttttgtaaaatttgcaaaagtaag
atattttaaccacaattggttaagactgctgtctctttccactccgacttcccctccatcacacttcccc
tcatgtcgggtggtattggagtggccgtgggcatttttgggatctggctaagggaaagttgagttgggga
tacatttagtttgggtttagtgggatatatttatgtggttcgcagtcacttccgtgtatagttaagttat
tgctagccgtcccggtataggaatggcttccaggaayattcctactgcccactgtgccgactcacccagc
gtcgtgacmtgaggcacaggaccggagrtcgtatcgcgatatgaacgtgtcctacggcacctggcaccgg
aagtatgcgggtagtggaggagaaacaaggtttgaaatgtacagagccagaagctagtctgtggaaaatt
cttccaatcatcagacgtgtaaaattgtaagcggaggattcggttctcatcgatgcctagycagagcaga
agttctctcctgtcagaaatatactcgataatgcagcgtatacaattataaatgcamcatgcatttattt
gcatttttggaagggaatcatgcgaaatagaatttatcagaantccttgtttgtagggcacagatctrta
gcagtactacaaacagtgagcacatctgtnnnnnnnnnnnnnnnnnttattaamtttcttgctgatatga
catgaaatwctgacgttaacgaagataacasttcacttctaatttaccatgacaaaaaagacatcagtga
caaactggttactgagtgtcattaattctaagagyatttaagattagtcactgcacaagaaaacttgaaa
tgccctgaaatcttacagctcatatatgaaagaaacttgataggggtttccccaaatttgacaacaattc
taaaaatttacatgacattaccaataacgagttgtgaagctgaaagaaacttttctaaactatcaataat
aaaaaacaaatttcgatcaaccatgctagaggaaagactgaattatctttctattctctctatagaaaat
attacaaaatcgttgtcatatgaagaggcgatcaaagagtatgcagccaaaaaatgtagggaaaaartat
tatagaagtgtgtcaggcagttaattaataaaaatatggtgttgtttttctggattttgtgatgtttgtg
gtatttgtcaactttttaaaatttgtaatttgttgcgatttcttttctcattctaaataaatattcactt
ttgtacctaattttgtattcgtaattttgtattctttttcttaaagagggccccccaaattgtataagct
tcaggccccacaaaacctggatctgcccctg
>MER74|MER74  Putative long terminal repeat of endogenous retrovirus.
tgttttaaaatgtaggttttattatttaggtatgttraggccaacagatcaggagacgactgccattgaa
aagacagtttgttattctcacagatcccaagagaagggggcatgccgcgccacggggagccccacgggga
agcaccggggtcggtcaggaggcagaaggagcgacgggaaaacgtrggcaagagcctttattgtggtttc
catgggaaggaatgrgcgaggcagggtaagcaggcttaggattggctagtttgaataatttcagcaggct
ctggggyataggggytgtccctagttgcctggtncctggccctgggatgattagggcagggggatagtgg
cccagagtgtaagagccaaatagaggaggtggttgggggtatgggctctggattggttggtttgcatatg
aaaggcgcgctcccgggcgagtccttcgctatctctaagaattggctagccctgggaggggcagtctctc
cgggrtcagcaaggccccaagatgtcaaarcatyataaaatacagaaaataaaaaagcatgattaataca
akytgctctgtgatgaacggatgccaaatagwcgaatacagaatctaagaaaacacagaacaca
>MER77|MER77  Primate MER77 repetitive element - a consensus.
actacggggggaggtgtcaaattcaaaggtctccaagacmaccctcctgtttartgattcgctagaagga
ctcacagaactcagaaaagccgttatactcacagttacggtttattacagtgaaaggatacagattaaag
tcagcaaagggraaaggcacataggncagngtccaagagarmcaggcacgrgcttccagttgtcctctcc
cggcggagtcgtrcgggcagcgcttaattctcccagcaacgrtgtgtgacagcacgcatgaagtattgcc
aaccagggaagctcacccgagccttggtgtccagagtttttrttgggggtcggtnanataggcatggntg
accccgcagcatggctgaccttggtcttctcaggcttgagccncccaagcatggctgacctnagttactc
agtctycagcccctccagargtcarryaccgtgtagcctaaggcccccaccataaatcacattgttagca
trractgtccggtatggcccaaggccytcgcagataaacaaagayactyttatcaggcaggacattccaa
gggcttagaggttatctcccarrgcctgaggataamcgagggccaganctttctttgggcaaggttaatc
ctttactgyayaagaccaca
>MER80|MER80  MER80 repetitive element - a consensus.
caggggttcttaaccttttttgtgccatgggcccctttggcagtctggtgaagcctatggaccccttctc
agaataatgtttttaaatgcataaaataaaatacataggattacaaaggaaaccaattatattgaaatac
agttatcaaaatattaaaaaaccaaatttgtgatatagtaatatatgtgcttctttattaatgcattaaa
taacaagatctagcggcgggtctaataactaccgtaatttcgaagtagtgatgagcataaatgatatttt
gagatatctgcaacaactgtaatgtgatatgaaaatatctgtgatttctattggtgacaaagtcacaggt
actgctaatactactgtggtttgttgcctacattcataattgaaggaaatgctaaatttcagttagaggt
tagtgaaaataaagatgtaanttttttccccatccaagttcacggaccccctgaattctatccatagact
ccaggttaagaacccctg
>MER82|MER82  MER82 repetitive element - a consensus.
cagttgatcctcattatccacagtagttatgttctataaagtcaccgcgagcactgaattagcgaatact
gaaccatcgctcctagaggaaatacagagttaggttcctgcaagcctctggtcacaacattttcatcaac
cgatcaatatataacyttgttttatgtgtgtttctgtttaaagacnncttatttaatatatattgttgat
ttattaacactgaactcacagccaacagcactataactcatgcctgaatgaagcttatctaacacacata
ttttctccataaggtacatcacagccttcttgtgcttaggaacaccagacagcacttcagcactatgctc
ggggccattttaaacggcgaaatcaccaacaaaaagcacaaaaatgtgaaaaacgtggcactaaatagac
ctcgaaaaggacgcttgtttacggtatgagagctgaaacaagaaggcagagcgtcgccttgttcgacctc
agctgggaacgtgcacgtcgggcgactcgaatttttcgctgctctgcgcatgtntgcaaatgaccgngaa
agtgctncaagtattgattttggggttacaaataaattttagcgagtaggcgaattcgcaaatacggaat
ccgtggataatgaggattgactg
>MER65I|MER65I  Primate MER65 repetitive element - a consensus.
[encoded data, 4899 characters]
agctatgcttttggagaaagatctcaattaaaagggggaaa
>LINE2|LINE2  Primate MIR2/LINE2 repetitive element - a consensus.
ctgtcattcattaccgntccttgttgcagtcatccatcgagcccggctcggtcactccctctcatttctc
gaagaktttrtctcctagntcaactgtcactctctcataataatantcctgtcataattcttggtgattt
caatatccacatagacgatccatccaatactctggcctctcagttccttgacctcctctctcccgtggtc
ttgttctcctctacccactctcagccactcactcccatggtcataccctagatcttgtcattactaataa
ctgcaactcctccataatctcaatttcaagcatccyactcttttaccacyacctcctatctttctagctc
actctctctggtgccctaactccaataatyctttgaccccaccgagacctmcaatccattgatctcatat
gcttttcactgtnccgtgtcctcttccctcctttcwttgctcagattccatggtcaatcattataatcac
tcccwtacanataccctcaactcccttgcccctytctcmctttgtcttacttrcttgncaaaaccacaac
cctggttaaatccaactntccgactaatttrcgcctgcacccgngcagctaaacatggctgragaaaaat
acacaaccatgctgactggtctcactttaaatttatgaccacgaacctcaagtgrgcccttaatgctgcc
aggcaattntactacatttccctagtccattcactctcccactctcctagatgactatttyatactttct
tnyttctcaaacctccaacayyyyytnccatctttactctcagctgatgaccttgcttcctatttcactg
agaaaatagaagcaatcagaagagaatttccacatgctcccaccaccacatctacccacctacctgcatc
tgtacccatatactctgccttccctcctgttaccgtggatgaactgtccgtgctcctatctaargccaac
ccctccacttgtgcactagatcccatcccctcttgcctactcaaggacgttgctccagcaattctcccct
ctctctcctgcatcatcaatttttccctctctactggatcattcccatcagcatataaacatgctgnnat
ttctcccatctttaaaaaacaaaaattctccctcgaccccacttccccctccagctaccgccctatttct
ctgctcccctttacagcaaaacttctcagaagagttgtctatactcgttgtctccacttcctcacctccc
gttctctcttaaacccactccaatcaggctttcgtccctaccactccactgaaactgctcttgtcaaggt
caccaatgacctccacgttgccaaatccagtggtcagttctcagtcttcatcttacttgacctctcagca
gcatttgacacagttgatcactccctccttcttgaaacactttcttcacttggcttccaggacaccacac
tctcttggttttcctcctacctcactggccgttccttctcagtctcctttgctggytcctcctcatctcc
ccgatctctaaatattggagtgccccagggctcagtccttggacctcttctcttctctatctacactcac
tccctgggtgatctcatccagtcycatggctttaaataccatctatacgctgatgactcccaaatttata
tctccagcccagacctctcccctgaaytccagactcctatatccaactgcctactcgacatttccatttg
gatgtctaacagrcatctcaaayttaacatgtccaaaactgaactcctgattttcccccccaaacctgct
yctcccgcagtcttycccatctcagttaatggcaactccatccttccagttgctcargccaaaaaccttg
gagtcatccttgattcctctctttctctcacaccccacatccaatcyatcagcaaatcctgttggctcta
ccttcaaaatatatccagaatccgaccacttctcaccatctccactgcyaccaccctggtccaagccacc
atcatctctcacctggactactgcaatagcctcctaactggtctccctgctyccacccttgcccccctnc
agtctgttctcagcacagcagccagaatgatccttttaaaatgtaaatcagatcatgtcactccyctgct
caaaacccttcaatggcttcccgtttcactcagagtaaaakccaaagtccttaccgtggcctacaaggcc
ctatatgatctggcccccgcytayctctctaacctcatcttctaccactttccccctcgctcactctgct
ccagccacactggcctccttgctgttcctcgaacacgccargcwcgttcctgcctcagggcctttgcact
tgctgttccctctgcctggaacgctcttcccccagatatccacgtggctcactccytcacctcmttcagg
tctctgctcagatgtcacctyctcagagaggccttccctgaccaccctatctaaaatagcacacccyctc
ccccatcatgcccatytttcttaccycgctttatttttctycatagcacttatcaccatctgacayacta
tatwatttayttgtttgtttgtttrttgtctcctccacyagaatgtaagctccatgagggcagggatttt
gtctgttttgttcactgctgtatccccagcgcctagaacagtgcctggcacatagtaggcgctcaataaa
tatttgttgaatgaatgaat
>LTR10A|LTR10A  LTR from human endogenous retrovirus-like sequence (HERV-I).
tgttaagtacggtgagttctgagatcctctccaaagaaccagtatgtcagtatgttcagctcncctgttc
tttgttctccattttaaagtttaacttcagtatgttcagctcncctgttctttgttctccattttaaagt
ttaactcaacagttctaatcagtagttaacgcctgttcccctggtcacctgctccatcctgactcatccc
gggtcacctgctttgacctgagtcacccttagtcacctgctctgtaaccatccttcccgccaaactactc
accccgccactctggctcatacccctgctctctttaaaatagccaatcggaattagcttagactgtgcgg
tccaaccctagccaataggggaacgacacagcagtaggggctacctgcatcaggaataagaaccccttcc
cctcccttgtccaggtgtgctctcgccattgctccatctgcgagacgcacccttctatagaagtaaaatt
gccttgctgagaaaattaaatttatgtttgagtgctatttcttttgcggcaccgaaacgaaaattaaatt
tatgtttgagtgctatttcttttgcggcaccgaaactttatttataaca
>LTR16A|LTR16A  Primate LTR16A repetitive element - a consensus.
tgtgacggacatgraggtgcgctgcccagatcccccttcaagaacggaartyttattncccyagctgctg
ggagwgctgtcggcagacagccctcagctgtcagccccttcaggaattgcctcngctgaagagagccgcc
tcgcccaaggtcacgccccctccccggggcagcccacatccaatgactgrtcaatrtggaggtataaagg
cccggccctctcgccccaactcgggacaactctgaagggccatyccagctccagagctccccgtggggtc
ggctgaggcctttgttgcgactgcattgcagcccaacttctccctctgcccaatcctgcttccttccctt
cccttccacaggcgttgatcccaagggcgctccctaataaacctcctgcacgctaatctccatctcagag
tctgcttcccggggaacccaacctgcaaca
>MER74A|MER74A  Primate MER74 repetitive element - a consensus.
tgtattaaccatgttttttattttctgtattcttgatgctttgacatctggggccttgctgaccctggag
ggactgcccctcccagggctagccaattcctagagatagcaaacgactcgcctgggagcgcgcctttcat
atgcaaaccaaccaatccagagcccacacccccaaccacctcctttatcgggctctcacactctgggcca
ctatccccctgccctaatcaccccagggccaggtaccagacaactagggacagcccctataccccagagc
ccgctgaaattattcaaactagccaatcctaagcctgcttaccctgccttgcccattccttcccatggaa
accacaataaaggctcttgcccacgttttcccgtcgctccctctgcctcctgaccgaccctggtgcttcc
ccgtgtggccccccgtggcgtggcgtgcccccttctcttgggawctgtgagtaacaaactatcttttcaa
tggcagtcgtctcctgatctgttggccttaccatacctgaataataataaaacctacattttaaaaca
>MER31A|MER31A  a consensus.
tgacaaagattctctgcttgaccaaactttagtcaggctcctgaaccttctcctaggcccatctgtgcac
ttccttgtaaaatccagttttagcaaagaaccctgctaagtcagtttagcmagaaccccccacccttgat
atctgatcaccctcaatatctgatcgggttcctcatcctccaccatcccccaggtgatgtctgatcaccc
tggcctgtcttcagcaagaatcctgttaggtcggtttagccagaatccccctacccctgatgtttcctct
tagtaattttccatccactgacccctcaccctgctccttggctataaattcccacttgcccatgctgtat
tcggagttgagcccaatctctctcccccactgcaaaatcccattgcagtggtccctgtacctatcgcaat
ggtcctgaataaagtcttccttaccatgctttaacaagtatcattgaataattttttctttaaca
>CHARLIE1|CHARLIE1  Autonomous DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgacatcatcgctctgatggctaatggaatgtgtgctt
gtgtattcttgtgttttctaaaatttttaaggtagtaggtttagggtataaatatgtaggttttcagaga
ttaactcagtttsttcttagcacttctaccgtgctcttactagctatcttcagttatacctgctataatc
tttgtaacctcattatcgtccaataaatcattattttraaatcctaaagttttcctcgwgcctatgtgaa
aacacaagaagcaagtactacttgtaaaacttgcttgcaataacattttgaaaatttcccaaatgtttaa
attttatcgacaacatatagaatttaatattttattctaaaataaaaatttatttataawgtttttccta
tatttaagggtggattgttggcttaaaaaagggagattagaagactcgctttctcaacccacagctgcam
catctatgtctaaagatgctgaaatggacataccagcaagttctctgattcctcatggaarggaggaatc
tactccaaagaaactgggcgaaactgtaaataaaaaacaaaaatatgataaaagctatcttctcagcttt
atagatgttaataatttaccttattgtgtcttatgcaacagaacattttcgaatagtattatggtgccag
ttaagttgcggcatcattttgagaccaatcattcagagtttaaagaaaaaggaattaaatattttaaacg
tagatgtgatgagctctttaaaagccaaaaattgtttgttgcagcttttcaaactagaaatgaaaaagcc
actgaagcatcttacaggataagttgccayattgcattggctggagaagcmcacacaataactgagagac
taataaagcctcgaacagttgacattgctgaatgcctgctggatgaaaagtcagtaaaagaaatcatagc
actgccactttccaatgatacgataactcgtcaaattaaagatttagctgcaaacatgaagaccgagtta
atatntcatctgcagaattgtacttttgccttacaaatggacgaatctacagatgtkgctagacttgctg
tgttgcttgcgttcgtctggtatcagcaccaactgatcatcgaagaacttcttttatgtgaattcttggc
aacaaacacaagtggtgatgaaatattcaaagtgttgaatgacttttttgaatctcatgatttatcctgg
aacaactgtgttgacatttgcactgatggtgcaaaagcaatggtgggtaaaactgctggcgccttagcac
gaatcaaggcagtggcaccaaactgtactagtagtcattgtattcttcaccgccacgcactcgcagtwaa
aaaaatgccagtttcacttaagaatgtccttgatgaagcagtaaaaattattaattttattaaatctcaa
cccttgagtacacgtctttttaatattctgtgtgacaaaatgggaagtacgcataaagcacttctgctgc
ataccgaagtacgatggttgtctcgaggaaaagcacttgtgcgattgtttgagttgcgagctgaactagc
tgcttttttcatggaacaccatttttacttgaaagaacgactgacagacaaactatggttattcagactt
gggtatttggcagacattttctcgaaaatgaacgaagtgagcctgtcacttcaaggaaaacaactgacag
tatttgttgccaatgataaaattcgagctttcaagcgaaaattagaattttggaaaacttgtatccgcca
ccgtgagcttgacagcttcccaatacttaaagacttttctgatgagatcggtggtgatattaacgaatgt
gattttttgatattgtataatgaaatgtgtcaacatttggaagatctgcataactcagtgaaccaatatt
ttccaaatgaccaatgcatgatgttacaaaatcatgcatgggtaaaagatccattcaaagtgcaagatag
accaatggattttaatgtaacagagtatgaaaagttcattgatatggtttcagattccacattgcaacta
acctttaagaaactaccacttgtcgagttttggtgtagtatcaaagaagaatatccacaattatctgaaa
aggctattaaaatactcctcccttttccaactacatatctgtgtgaggccagattttcttcatatacttc
aaccaaaacaacatatcgcaacagattgaatgcagaagcagatatgagaatccagctgtcttctattaag
ccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcactaaatttttttgttttgga
aaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggtttattattttwaaatgaat
waataaatattttaaaaatttctcagttttaatttctaatacggtaaatatcgatagatataacccacat
aaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtcctgagaccaaaaagtttga
gaaccgctg
>CHARLIE1A|CHARLIE1A  DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactgtgttgacatttgcactgatgg
tgcaaaagcaatggtgggtaaaactgctggcgccttagcacggatcaaggcagtggcaccaaactgtact
agtagtcattgtattcttcaccgccacgcgctcgcagtnaaaaaaatgccagtttcacttaagaatgtcc
ttgatgaagcagtaaaaatkattaattttattaaatctcgacccttgagyacacgtctttttaatattct
gtgtgacaaaatgggaagtacgcataaagcacttctgctgcataccgaagtacgatggytgtctcgagga
aaagcacttgtgcgattgtttgagttgcgagctgaactagctacttttttcatggaacaccatttttact
tgaaagaacgactgacagacaaactrtggttattcagacttgggtatttggcagacattttctcaaaaat
gaacgaagtgagcctgtcacttcaaggaaaacaactgacggtatttgttgccaatgataaaattcgagct
ttcaagcgaaaattagaattttggaaaacttgtatctgccaccgtgagcttgacagcttcccaatactta
aagacttttctgatgagatcggtggtgatattaacgaatgtgattttttgatattgtataatgaaatgtg
tcaacatttggaagatctgcataactcagtgaaccartattttccaaatgaccaatgcatgatgttacaa
aatcatgcatgggtaaaagatccattcaaagcgcaagatagaccaatggattttaatgtaacagagtacg
aaaagttcattgatacggtttcagattccacaccgcaactaacctttaagaaactaccacttgttgagtt
ttggtgtagtatcaaagaagaatatccacaattatctgaaaaggctattaaaatactcctctcttttcca
actacatatctgtgtgaggccagattttcttcatatacttcaaccaaaacaacatatcgcaacagattga
atgcagaagcagatatgagaatccagctgtcttctattaagccagacattaaagagatttgcaaaaatgt
aaaacaatgccactcttctcactaaatttttttgttttggaaaatacggttatttttcataaaaatgtta
tttatgttaacatgtaatgggtttattattttwaaatgaatwaataaatattttaaaaatttctcagttt
taatttctaatacggtaaatatcaatagatataacccacataaacaaaagctctttggggtcctcaataa
tttttaagagtataaaggggtcctgagaccaaaaagtttgagaaccgctg
>CHARLIE1B|CHARLIE1B  DNA transposon.
cagcggttctcaaagtgtggtccgcggacccctgagggtccccgagaccctttcagggggtccgcgaggt
caaaactattttcataataatactaagacgttatttgcctttttcactctcattctctcacgagtgtaca
gtggagttttccagaggctacatgacgtgtgatgtcgcaacagattgaatgcagaagcagatatgagaat
ccagctgtcttctattaagccagacattaaagagatttgcaaaaatgtaaaacaatgccactcttctcac
taaatttttttgttttggaaaatatagttatttttcataaaaatgttatttatgttaacatgtaatgggt
ttattattttwaaatgaatwaataaatattttaaaaatttctcagttttaatttctaatacggtaaatat
cgatagatataacccacataaacaaaagctctttggggtcctcaataatttttaagagtataaaggggtc
ctgagaccaaaaagtttgagaaccgctg
>CHARLIE2|CHARLIE2  DNA transposon.
cagtggtcttcaaactggggtatacatacccctgggggtacatgaagactttccaaggggtatgcgggca
cggatagttttaagggaatcaatttccagatcctcarcttccatatgtactctttcctaaaactgatctg
cctgagaacgcgcctgtggcgagggcctgccgnctttcccacttcccctttcacgatcgcccttctccca
ctttacaaaagaaaggcatacctctcacccatcccgaatcttactatggtgcattgccctggggtgtaaa
aacctccggggcaccaaacaaagggacaattcgaaatactggtgttggtgaagcctcctttaatcaaggc
accataarcccgnngtacagttttatgtcttccctggctttayaaatatttctgttaagggtaaagcatg
atgttggaacaaggtactttggcycatgttggggtgttctgaattcagatatatcntagagtggggtggt
gggagtgatgacgatttttncttgacgatgttgcttcttccatcnctattnacaaagaatacattgctcc
tgaggaagagtcctgagagcaaagcaaagagaacattgntaagaaatggcgaagatggcagtgcnttatt
tcatccaggtgacaaactcatggcgaggtctatctatctgakagttggaatattcaagatwtgkaaaagg
cattctgggaaataccaatcngctacgaagcatgcctcctctgcactttcaccattctcagtantgagaa
agagcttggtgagtactctcattcacctgcgtcttagtctgkgtctcagttgcatattttgcatgatttc
aaggmggtggaggcgaaaagctctgcaattacttctaacagatcaacattacattttcaagtaaaaggaa
catatattggaggtaagttmrtgtatkctattttcttgaacatttattcagattmataggagaaacattt
tcattaacttttgccaaagatttctagatagtgtaaatatatttttctatttaggcamaagtctcctgct
cactgtcactcatgaacmacttctctgttcatttattnattcctaccatatacttactagagttagatta
anttaacaggaatatgttgcagattctactgtaantaatgcacwtaatagcagtcagtaatataactttt
gtaaacccatanttattaatgatccaatancttctctctcnttttgctgwcgatttccacaaagtagatt
aaactgtactcttaaaagcagaacattcacttatgtacgagtgcaggacagaatgttccaaaatgcaats
tagaatgcgatgcccwgaacttcagaaaaccagcttcacttaattaggattaatttctcccgctcggang
ctaatatactgttttanttctgtcaaatgnatnattataagtaataatttttnacaataacgaaattant
antatatacatgaatannctcaagtgtccgtccctctgtcatatttttaaaatgcatttngagacgttct
taaaaaatgaaatwtggtattgtntataggtctctgttcgtagtcgakgagamaagtccccaaatncaca
atttacaatttttcgwtttttccaactccttccatgtatattgaggtccataagcaaggtgcctctaagt
gaaagagtagcaggnataattaatagtcatttgataagtcttggtgaagccttttgggtatacttcctag
aaactgagaaagtgaatgactctaatgactgggtaacaaatccttttgcaagtcaggtggtttccaattc
tttgctttcaacaaaattgaaggaggacctaatcgagttgtcagctgacagatcattaaaaataattttt
gatgatagatcaytatgtgatttttggcatataactcggaaggagttcaaagaattgagtgacattgcta
taacaaaactccttccattcccatctacttatttatgtgaacaagrtttctcagcgcttacatctataaa
aatgaaaaataggaatagaattgatgctgaactctgtctcattctagcaataagtaatattcatccacgg
atacatgaactaattggggaaacaaggccccatccatctcattaagagatgcatttccaataaaatttta
ctttttatgtttawtatttatcaaaatttgtaatatgtttatgttgttttgatcaattgtatattaataa
taattgtaatgataactcaatccagaagaaaawttttaacacttagagccttatggtcanarkaaatata
aaaaattaaatttcaatttatatacatatttttgttgcagagaagtatgatagggtgatcaataaaagac
tttcaagcataaaaatatattacattaggataaaattctgtgggggaagtggaatggaaatacgagttca
aggagaaaaagagaacaatgtaaaatttccgactgttaaagaagagcttgctcatgtattttttaaatgg
atgatggtgggtatcaaatcgctatggtatttagattccattggatacatttaaaagagtgatgtaacag
ttttattttaaaatgtcaatatttacaatatgccagaaattacatcctttgcaactatttaaacttatga
tgaaaaattttagatgtcaacttaaaaatgtgcgagggrgtacatagtttttcaaaattcttttagggga
tacgcaagcaaaaawgtttgaagaccactg
>L1MD_5|L1MD_5  Partial L1MD LINE1 repetitive element 5' end - a consensus.
ttaaaaacaaagcgggagacttccgcttccgggaagatggagtagacgtacttttccctattcctcccgc
taagtacaactaaaaaccctggacattatatataaaacaaacataagaagactctgaaaggtggagagaa
gaaggcagaccggctagggacctcgggacccgaggaacgacacggtagtgagttccctgggttttctttt
tgcctcatatatcccagacttggagctgaagaagccggcaacccggaaacgccaacgggcacagacaaaa
aaagccccaacaaaagcctgctctctctagccaaaggaccaggaaaggggcagcctagcaagacagaaaa
cttttagacaataaccgctctactccagccaaacaccacagaaaaaactgtggccccacccccacccacg
ccagcaaaggccgagtggggagcctagacttccaccctcaccaggctgtaacgaggcgccccaacacctc
caccgggatggtgtcagagaaggccaagtagggagctgggactttcatccccgccaggcggtaatgaggc
ccmccttccccttgccmctgcggtgtcagtggagaccacgtggggagcctggacttccacccccacccgg
cagtaatgaggcgcccctccccctccctactggggtggtgtcagaggaggcctagtggagagtcgggact
ttcaccaccgcccagcggtaatgaagccacctcctcctcttgccmccatggtgtcagtggaggccacgtg
gggagcagtaatgaggcactcctacccctcccagccagggaggtatcagcggaggcctagtggggagccg
aactcccacccccgcccagcagtaacgaggagcccctccctcacctcgggtgtcaacggaggccgagtgg
ggaacctggacttctacccccacctggcagtaatgaggcagcgcccctncccctcycctgccggagcggt
gtcagaggaagccggctaaaacagaaggtttaaataagatccagagtctcataacataatacccaaaatg
tccaggtttcaatcgaaaatcactcgtcataccaagaaccaggaaratctcaaactgaatgagaaaagac
aatcaatagacgccaacaccgagatgacagagatgttagaattatctgacaaagattttaaagcagccat
cataaaaaatgcttcaataagcaattacgaacgtgcttgaaacaagaraaaagtagaaagcctcagcaaa
gaaatagaaagtctcagcaaagaaatagaagatataaagaagaaccaaatggaaattttagaactgaaaa
atacaataaccgaaataaaaanctcaatgratgggctcaatagcagaatggaggggacagaggaaagaac
cagtgaacttgaagatagagcaacagaaattacccattctgaacaatagagagaaaatagattggaaaaa
aaaatggacagagcctcagggacctgtgggactataacaaaagatctaacattcgtgtcatcggagtccc
agaggagaggaaaaagagrrtagtatttgaagaaataatggctgaaaatttcccaaatttggca
>LINE2B|LINE2B  3'-end of L2 repeat (subfamily b) - a consensus.
tcccccttgctcactctgctccagccacactggcctccttgctgttcctcaaacacgccaggctctttcc
cgcctctgggcctttgcacatgctgttcyctctgcctggaacgcccttccccwctccttcancctggcca
actcctactcgtccttcaggkctcagctcaratgtcacctcctccaggaagccttccctgacttcccagg
ccgagttaggtgccctcctctgggcccccccggtcctaccctgccactctgggttatmattgtctgtkng
cangtctgtctcccccactggactgtgagctccgcgagggcagggactgtgtctgtcttgttcaccactg
tatccccagcgcctagcacagtgcctggcacatagcaggcgctcagtaaatgtttgttgaatgaatgaa
>MER92C|MER92C  Primate MER92C repetitive element - a consensus.
tgacaatgcwgaactttacctgagccctgtgctcccggaaaacagcgatggttaagaaatccccccatcc
ttttgtgttccnagaaacggcttaccgcaaagaactacccttccctatatgacttaaataagactctctg
ncccttctttctcacgacttccataagatcannnatgattccttncctgnnaagaccaaacacagacctt
tccccttttgcctgaacccgctgacaaggccagacacggaccctccaacttcctattctttgtttcataa
atgattagctgagattagaagngtctgtccccctgaaactagctagacacagagataaacatttcctgtt
cagctaaccgagacttcccctgattgcaaaacaaccccccctgtaaatctccccacntgaaacctatcta
ccccttcctataaaagtccaaggcaaaaccaccctgccgagacacttcatagtcttcggatcttggatgc
tctccctattgcaatagcctgaataaaatcatctccttamttgtctagtgcattttgtctttca
>L1P_MA2|L1P_MA2  Primate LINE1 subfamily consensus; L1PMA2 subfamily.
[encoded data, 7739 characters]
tctcatgtaccccataaatatatacayctattatgtacccayaaaaat
>GOLEM|GOLEM  Autonomous DNA transposon; POGO superfamily.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagtatg
ccgtgttagaccggcagcagccacatgcatctcgtgtttaccgcgtctcttgattgcatcattttctctt
gtgcttgatttaatctcatgtgttttgttcatcacggctcctaagcgttcaaaatccacggctaatgttg
ccagtaagaggccacgtcgagtaattgagctggaaacaaaattaaaagtgattaaggaccgccgaaggtg
gaaaatcagtgatggttattgctcgccagacaggtatgtcccattcgaccatagctgccaccttgaagaa
caagagcaaagtgacagaaactgttaaagggtctgcttcatcgaaggcgacgagaccaacaaatttgaga
agtgccaacatcagatatggagaatatctgctaatgacctggattgaaaaccagacacagaaacatagct
ctctcagcaccacgacgaccacggccagagcaaaagggatatttttgatgttgaaagaaaaggctggacc
cgactgtgatatcgaatttactgctagttccgggtggtttaaatgattcgagaatcgttatccattacat
aatgttaacgtgactgctgagtctgtgagggctgacgtgaaggcagctgaagagtttttggaaactctag
atgagtcgtggagaagaaatacttgccagagcaaatcttcaatatggaggaaacctccctattctggaaa
cagatgcctgaaaggactttctgtcataagggggccaagtcaatgccaggtttcaagggttttaaggaca
ggaaacggtcttgctttggggcaatgttgcaggctacaaattgaagccctttgtgatccgacacagtgaa
aaccccagggccttcaagcatatcagtaagcacacgctgccagtgtactacaggagcaataaaaagtcat
ggatgatccatctcctcttccaagatgccctcctgaattgctatgccagagaaatggagaagtactgttt
ggggaataacatacctttcaagattttgcttattgttgataatgctcctgcacatcttccttttactggt
gatcttcatcccaatttcaaagtggtgtttctctctccaaacaccacctctttgatccaatggatcaagg
aattatagcagctttttaaaggcctactaccagagaagggccttcgcccaggttatcactgtaactgagg
aagacactgatgcaattctggaaggattacaacagccaagactgcatcaagaaccttgcttgggattggg
gtgatgtcaccaaggagtgtatgaatggcatctggaagaagacactcaagaggtttgtccatgacttcaa
aggatttgccaaggatgaggaggttgcaaaaatcaacaaggctgtggttgagatggcaaacaactttaac
ctgggtgtggatgaggatgacattgaggagctcctagaggtggttcctgaggaattgactaatgaggagt
tgttggaactggaacaggaatgcatagctgaagaagaggcaagagaaaaggaaactgcaggagaagaaga
agaacccccaagaaaattcacagtaaagggtttagcagaagcttttgcagacctcaacaagctccttaaa
aagtttgaaaacatggaccccaacaccgaaaggttttcattaatagagaggaatgttcatggtgcattat
ctgcttacaagcaaatctatgatgacaaaaagaaacaaaccaagcaaaccatcatggacatatatttctg
aaaagagtgacacctcctcaagaagagcctcaggcaggtccttcaggagatattccagaagaargcatcg
ttatcataggagatgacagctccatgcatgttattgcccctgaagaccttccagtgggacaaaatgtgga
ggcggaagacagtgatattratgatcctgaccctgtgtaggcctaggctaatgtgtgtgtttgtgtctta
gtttttaacaaaaatnttttaaaaaataaaaaaatwaaaaatttwwaaatagaaaaaagcttatagaata
aggatataaagaaagaaaatatttttgtacagctgtacaatgtgtttgtgttttaagctaagtgttatta
caaaagagtcaaaagttaaaaatgcaaaagtttataaagtaaaaaagttacagtaagctatggttaattt
attgctgaaaaarwwwwwwwwwwwwwataaawttagtatagcctaagtgtacagtgtttataaagtctac
agtagtgtacagtaatgtcctaggccttcacattcactcaccactcactcactgactcacccagagcaac
ttccagtcctgcaagctccattcatggtaagtgcyctatacaggtgtaccattttttatcttttataccg
tatttttactgtaccttttctatgtttagatacacaaatacttaccattgtgttacaattgcctacagta
ttcagtacagtaacatgctgtacaggtttgtagcctaggagcaataggctataccayatagcctaggtgt
gtagtaggctataccatctaggtttgtgtaagtacactctatgatgttcgcacaacgaaattgcctaatg
acgcatttctcagaacgtatccccgtcgttaagcgacgcatgactg
>ZOMBI|ZOMBI  Autonomous DNA transposon; POGO superfamily.
caggttgagcatccctaatccaaaaatccgaaatctgaaatgctccaaaatctgaaactttttgagcgct
gacatgacgccacaagtggaaaattccacacctgaccttatgtgacgggtcacagtcaaaacgcaggtgc
acaacacacagtttattcggcgtccccaagggaaaaaagaccctcccagcccccttcagctgcggtatat
cttttccgcgcacacccagattcccccatgcaagcacgcccacaaagggtaataaaatggcacgtgtgca
ggctggacacaccaacggcaggttccccacaatgcccccacatggggtcaagacctacgtgcattactca
ctgtgtttttttgcttattctctgctctgtggtgtaaagatattgttgaaaatgtcaaaaaggcctgtag
atacccctgtgagtaacaatgataagaaaaaggaagcatttatgtttatctatagcacagaaaagtcaag
ctgttggagaaactggacagtggtgtaagtgtgaaacgtcttacagaagagtatggtgttggaatgacca
ccatatatgacctgaagaaacagaaggataaactgttgaagttctatgctgaaagtgatgaacggaagtt
aatgaaaaataaaaaaacactgcataaagctaaaaatgaagatctcgatcgtgtattgaaagagtggatc
cgtcagcatcacagtgaacacatgccacttaatggtacgctgatcatgaaacaagcaaagatctgtcaca
atgaactgaaaattgaagggaactgtgaatattcaacgggctggttgcagaaatttaagaaaagacacgg
cattacatttttaaagatttgtggtgataaagcatctgctgatcatgaagcagcggagaaattcattgac
gagtttgccaagatcatcgctgatgaaaatctgatgccagaacaagtctataatgctgatgaaacatcac
cgttttggtgttattgccccagaaagacactgactacagctgatgagacagcccctacaggaattaagga
tgccaaggacagaataactgtgctgggatgtgctaatgcagcaggcacgcataagtgtaaacttgctgtg
ataggcaaaagcttgcgtccttgctgttttcaaggagtgaatttcttaccagtccattattatgctaaca
aaaaggcatggatcaccagggacatcttttctgattggtttcacaaacattttgtaccagcggcttgtgc
tcactgcagggaagctggactggatgatgactgcaagattttgttattccttgacaactgttctgctcat
cctccagctgaaattctcatcaaaaataatgtttatgccatgtactttcccccaaatgtgacttcattaa
ttcagccatgtgaccagggtatctttagatcaatgaagagtaaatataaaaacactttcttgaacagcat
gctagcagcagtgaacagaggcgtgggtgtggaaggttttcaaaaggagtttagcatgaaggatgccgta
tatgctgttgccaacgcttggaacacagtgactaaagacacagttgtgcatgcctggcacaacctctggc
ctgcgactgtgttcagtgatgatgatgaaccaagtggtgactttgaaggattctgtatgtcaagtgagaa
aaaaatgatgtctgacctccttacatatgcaaaaaatataccttcagagtccgtcagtaagctggaagaa
gtggatattaaagacatttttaacatcgataatgaggctccagttgttcattcattggaagaagtggata
tcaaagaagtcttccacatcgataaatgcattaccagttgttcaaccatcaccggatggtggaatagccg
aaatggttctgaatcaaggtgattgtgatgatagtgatgatgaagatgatgacgttaacactgcagaaaa
agcgcctatagatgacatggtgaaaatgtgtgatgggcttattgaaggactagagcagcgtgcattcata
acagaacaagaaatcatgtcagtttataaaatcaaagagagacttctaagacaaaaaccattgttaatga
ggcagatgactccggaggaaacattttaaaaagccatccagcagaatgcctcctcatccctagaggaccc
acttcctggtccctcaactgcttctgatgtttcttctcacttagaaaacaaaaaccaaaaagcaaaaaaa
atacagtgtacagtaaccttttaatcaaaacacagcatcgtagatggagactgaaagcctgccattgttt
gttgttgctgttgtttaacagctgatacaggtattctggtgatgctactgtgctgcttagttaccctgaa
cacatttttttttcactgtattaatggtatgtcatattttttactgttaagtacttatgtgtgaataagt
gtaagaaaatgattgcttatcggtagcatataaattcagagtcaggaatgatggtgatgccaaacaacca
cagattgtccacatgggtggctgagatagtgacacctttgctttctgatggttcaatgtacacaaacttt
gtttcatgcacaaaattattaaaaatattgtataaaattaccttcaggctatgtgtataaggtatatatg
aaacataaatgaattttgtgtttagacttgggtcccatccccaagatatctcattatgtatatgcaaata
ttccaaaatctggaaaaaaatccagaattcaaacacttctggtcccaagcatttcggataagggatactc
aacctg
>ZOMBI_B|ZOMBI_B  transposon - a consensus.
caggttgagcatccctaatctgaaaatccgaaatccaaaatgctccaaaatctgaaactttttgagcacc
aacatgatgccacaagtggaaaattccacacctgacctcatgtgataggtcacagtcaaaayacaatcaa
gactnnncnagcnnctncngttgctnttnctgccagncaacnacagnttgtgcacctngntggcaragan
actgacacatttgctttctkatggttcagtgtacacaaactttgtttcatgcacaaaattatttaaaata
ttgtataaaattaccttcaggctatgtgtataaggtgtatatgaaacataaatgaatttcgtgtttagac
ttgggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaatctgaaatc
caaaacacttctggtcccaagcatttcggataagggatactcaacctg
>LTR33|LTR33  LTR from human endogenous retrovirus-like sequence (HERVL33).
tgtgctggatatcttctgtttgcccctccagatccactctccacccttctccaccctgctctgtgccccg
ggaggctgacctctatggactgcatcamcgggctcccttgccctctggcttctggttgggtttggccaat
gggaggcactggcaggagattggagggtggaaggagagwgagatcggggtatttattccccyggctccct
ccctgctgggctgcggtttggcagtggctgcgttcctctaccgaaggccacagctcctgtcgggcagccc
tctccttgtagctacagctmcagctctctctgggttccggtaacmgctccctccccttgccccttcaggc
ctaggggtggtaacagctycccgctgttgctagccccggggtgcttcaccatcccttgttggtttccctt
aaccctgcccacacctttgtaaatagtcccttcattaaactctcctcaattactccatttgagtgtgcca
tctgtttcctgccgggaccctgactgataca
>L1M3A_5|L1M3A_5  Primate L1M3A_5 LINE1 repetitive element - a consensus.
gagtgawgtcagcaagatggcagaatwggaggtctcaggctccagtctccctcacagaaagtccgactag
caactattcacagacaagaacgcctttgtgaaaaatgccagaacttggaaatgagrctgagacanctncg
tggancacagaaacgaataaaaaccacattaaaagggtaagaggaaccgtctcactttaaccacgttgcc
cctmagtcggcacagtrccacacngagagaawttccccgggcctacagtttctacagtgggaaaagagag
ctkgaggtggacatccagcttccctagcattccaagatgcttcccaggargcccactcynatctcacctc
atgaggaaacactgagggaaatggcanggctagaccgtctggagtcaggtagaaacaaaaaaagggggca
nagctcatagtaaccagtgcacggatcttggtggtagctctgtattcctgccagcggtggcgcctgatca
gaggtaccagccaatggcatagcccacccgcaaagctgagctggtcgctcccagaagcacggtgagaagt
tcnacccggcttgagtccctagatggccagcctccaaacccagccttagascctaccccagngctccacc
caggcagggagatacacaccacmatgtatttcagcagagcacagaggctagacctgcctgacccaggagc
ccaaacagtgactcggcccagcctcaaagcccaccccaaggacccacacaggcaggaaggcaaacgcgga
ttgtgcakctctaccagggcaaagtgccagccaccgtccattcstwncagcaattccatctaaccttgca
gcctaggggctggccctgcccaactgcagagctsaaacagcggctccgcctggccasagagtmtaccccg
tggcycagcccaatagacgcgactncaacgtccantcagcggctccgcctaannncagagcccagccagc
agccccgcctgacctcagagcmcaggcantagcccgnccagctagagaacccaamagcaagcactgccta
cccatggttattaccagctgtcccatccagaatcacaagctggactgaataatgaaggtctwttcctgnc
gaagaacacctgtaaaagccagaagaggtggctgcctmgtcaaatgcatggataccaatgcaaggacgca
agggttacgaagaatcaaagaatcatgacacctccaaaataaactaacaaagctccaacaatggamccta
aagaaataaagatctataaaatgactggcaaagaattcagaataatcctcttaaagaagttcggtgagct
acaagaatacatagatagaaaattaaataaaatttggaaaacaatacatgaamaaaacgaaaagtttgac
aaagaaatagaaacgawtattctaaaacccaaatagaaatcctagagatgaagaacacaattgctgaaca
aaaaaattcaataaaaagcttcgacagcagactcaatcaagcagaagaaagaatcagtgagctcgaagac
agaacatttgaaattatccagtmagaggatcaaaaataaaaaaaatgaaaaacagtgaagaaagcctata
ggaattatgggacaccatcaagaaaactaacatacgcataatagaaatnccagaaggagaagagaaagaa
ggccagaaagyatattttaagaaataatgactgaaaacttcccaaatctggggaaagatgccagcatcca
ggtacaagaagcaca
>L1M3D_5|L1M3D_5  Primate L1M3D_5 LINE1 repetitive element - a consensus.
gagtgacatcagcaagatggcataataggaagccctggacctttcttcccttcacagacacactgattca
gcaacaattcacggaaaattacctttgtgagaaatgcagaaactagttgagaggctcctgcaccctgggc
gagcgcgaaaccagacccacatcaaagccggtagggagattcaggacaccctctcatcgaagtccctccc
cccggcwcagcgcmgtgcgatcggaaggaaaaaacccccaactcccggcttctcccaggggaggaaaaga
gttggttcgcacgtcaagtgccccracttttccgaggggctacccagaggactgtcttctgtcttgccwg
tctcrgagctctgataggcccggcataatctagacacccgggggagaacagagatggtggtttgggctgg
tagatgccatagctnctcacccctgctcagcacagaacaagnagatgaaaacccccagntctcagctttc
ccctgaggaggaaaanagttgaatggactggaaaacagaattgaatggagcatccaacaatccagctttc
tgggagtgcctaaggaaccgattgcatttcaacttgtcgcgctacgctgatangattnancataccctan
atgctcggcgactgcaaagaacaaaaancaggttggactagtacgaaggtttgagaggnccccaaaatct
ctggctaggctgatcggtgaaggtcttctcctgcataaggccagtctgtgaagactgagagaggtggctg
ctttgtataatgcgcagacaccaatacagagagtcaaggaaaataaagaatcagggaaanatgttccaaa
caaaggaacaggataattttccagaaactgaccctaataaattggagttatanaatttacctgacgaaga
attcaaaacaattgttntaaagatgctcatgaataacatgataaagatgctcaccaagatcaggaaaaca
atacatgaacaaagtgagaatttcaacaaagagatagaaaatgttaaaaagtaccaaacaaaaatcatgg
agctgaagaatacaataactgaactgaaaaattcactagagaggttcaacagcagactagatcaagcaga
agaaaggatcagtgaactcaangacaggtcattcgaaattatcgagtcagaggagcaaaaagaaaaaaga
atgaaaaagagtgaagaaagcctaagggatttatgggacaccatcaagngaaccaanatacacatcatgg
aagtcccggaaggagaagagagaganaaaggnccagaaagcntattcgaagaaatagtgactgaaaactt
cccaaatctggggaaagaaatggacatccagatncaagaagccca
>L1MB6_5|L1MB6_5  Primate L1MB6_5 LINE1 repetitive element - a consensus.
ggtaatgtcagcgaaaatggcggagtaaggamctccgaaaattcactcctccataaaagcaatgaaaaca
ctggcaaaaattgtcagaatcaactttttcagaactctggaaattaaccaaaggcttacagcaatctagg
aagtgtttattcaagaaaaayagctgaatctcwgtaagaacagcgagctttgtggtattttaacttgccc
tantcccatcccccwctctccagctcagcagtagccttgaaaataacagcttatattatggtgaaaacca
gcagccaccggagkgggcagaacgggtttggagcttctcaaaagycncattcccagggaattgtcattat
ttgacctgtctggcggctccctggaagactccattcamagggcttgtctttatttgacctgactcagagc
tcactcagtgcgaamagcattatacctgggggcatttgttgaaaacawttagaggcaawtgtttaacacc
acagctgcctgaggcagtgrataacagttggggcaaacaagaggctgaccaaaaagcttaaaaggaaaag
ctggggaatgagatgtccgnaggggctttgaaaagctccaacatattcctgggaatctagaaggccacgc
gcatgcccagggctgtacacatgctcagaaaagacctaagaaggccctaagctctcacctctggctgacc
ttgagactctgcacaagcaggaagtgaagactaaggcagagttgtaaactgcctggctgagtgttgaagg
tatgccccaacacacacacagaaccccttggcaaagamtgggagacttgttggttcmaggcatttaagga
aatctctgtccaatcattagctgaccactaagctaacngagcagagacttcagtggccacacatgacaaa
gaatacagactttacaaaattagttcagaaaagtcactaaacaaacagcaacaanaacacaaaagagyaa
caacaaaccctggaaaggagggagaatctgatttccagagttgccacattatattatttaaaatgtccag
ttttcaacaaaaaattacgaggcatacaaagaaacaagaaagtatggcccatacacaggaaaaaaagcag
ttaatagaaactatccctgaggaagcccagacgttggacttactagacaaagactttaaatcagctattw
taaatatgttcaaagaactaaaggaaaccatgtntaaagaantaaagaaaaatatragaacgatgtctca
ccaaatagagaatatcaataaagagacaaaaattataaaaaataaancaaatagaaattctggagttgaa
aagtacaataactgaaataaaaagttcactagaggggtacaacagcagatttgagcwggcagaagaaaga
atcagcgaacttaaagataggtcaatcgagattattcagtctgaggaacaaagaaaaaagaatgaagaaa
aatgaasagagcctcagagacctgtgggacaccatcaagcgtaccaatatatgcataatgggaatcccag
aaggagaagagagaaarkggcagaaagaatatttaaagraatagtggccgaaaatttcccaaatttgatg
aaaaacatywayctwcayatccaagaagctcaataamctccaagtaggataaactcaaagagatccacat
ttasatgcatcatagtcaaactgctgaaaaa
>L1MEC_5|L1MEC_5  Primate L1MEC_5 LINE1 repetitive element - a consensus.
aatgtnttaaaaaattcactkaaaacataatasaagacttctgcttccggcyaagatggagtaacaggga
ccggatttaccctcctrcctgaaacaacyaaaacgcggacaaaatatatgaaacaacggttttcaagaca
ttgracatcaggcagcgmaggacagcgatccctgrgagaagggaaacgaatgaggtgagccctrtgatcg
ccycagcttactgcctkgagatagtttccaggccacggcacagagaggagaaacccaggcagagcccggc
ggwctccctgagttgaggagacggagctgagagtycgrggaggccaaggctggctagagttcgcagggca
gaataccagagaggagaaagccgcamagagagaacttctgagatctgcagagggtccccytcgagtcttc
agctgagtactgaycagcncatgcatgcgaggaaacyacccgaggctagggaaagaaccmcacgaaagga
ttararggaacaatccccagagctcacacagggccgggaatagttcctgtttccaccagccagagtggaa
aacctcataattcacggggcatcgggtagagtactcagaagggttttgcctcagtagcggggaaaaatta
gccctaaactaaacactgctctggtcccacctaacaaatcttaaaagcaagcctcgaaaagatcaaactg
tttccaagtaacttaactgcatcccagaataaagctcaagaatatttawaggaatacaaaaatatccagc
acccaamaaggtaaaattcacaatatctggcatccaatcaaaaattaccaggcatccaaagaagcaggaa
aatacgacctataatgaggagaaaaatcaatcaatagaaacagacccagaaatgacanagatgatagaat
tagtagacaaggacatttaaamagttattataactctnnymwatatgttcaagragntaaagaaaaacat
gaacataatgaagaaagagrtggaagatataaaaagacccaaatagaacttctagagatgaaaawtayaa
trtctgaaatgaaaaatacactggatgagattaacagcagattagacactncagaagaaaraattagtga
acttgaagacatancaatagaaantatccaaaatgaaatacagagacaaagaaannaaaaayagacaaat
aaaataaagcgtcagtgagctgtgggacaacttcaagtggcctaayacacgtrtwattggagtcaaaaag
aaagganagagagaatgaggyagaagaaatattggaagaaacgatagctgagaattttccaaaattgatg
aaagacatnaatctacakattcaagaattccaatgaatsccaagyaggataratacagaagaaacaacac
atctwgacatatcatagtcaaatcgyagaaaaccaaagayaaagagaaaatcttaaaagcagtcagagar
aaacaacatattacgtacagggggacaacaatacaaattaaagctgactttttaccaggcacagtggagg
ccagaagacagtgggatgawatatttaaagtgctgaaagaaaagaactgtcgacccggaattctatatcc
agcgaaaatatctttcaaaaataaaggcaaaataaagacattctcagacaaacaaaagctgagataattc
attaccagcagacctgcgctacaagaaatgttaaaggaagtcnttcaagcagaaagaaaatgacaccaga
tggaaacatagatctacacaaagaaatgaagagcgccggaaatggtaamtatacgggtaaatataaaaga
natcctttcttattatttnnaatttctttaaaagataattggctgtttanagmaaaaataataacaatgt
attgtggggtttataacatatgtaarcaaaatgtatggcaacaatagcacaaaggccggnaggggagaaa
tggaagtataytgttgtaaggttcttatactntacgtgaagtggtataatrtcatttgaaggtagactgt
gataagttaaagatgcatattgtaaaccctagagcaaccactaagataacaaaacaaagagttatagcta
ataagccaacaaaggagataaaacggaatcataaaaaatacccaattaatccaaaaaaaggcanwaaaaa
aaaaatggaacaaagaamagatgggacaaatagaaaacaaatagcaaratgatagatttaaacccaacca
tatcaataattacattaaatataaatggtctaaacgctccaattaaaagacagagattgtcagaatggat
aaaaaaacgagacccaaatatatgctgcctacaagaaacccactttaaatataaagacacaaataggtta
aaagtgaaaggatgaaaaatgatatntcatgttaacgccatccaaaagaaagctggagtagctatattaa
tatcagacgaagtggatttcagaggaaagaataccgccaagagncaaaaaaggtcattttataatgataa
agg
>MER91B|MER91B  Primate MER91B repetitive element; non-autonomous DNA transposon.
cagggctgccatgtacagttgtgcaggttgtgcactgcacaactctagggggcgccattcacatcataga
catcacagatttgtataatgacaattttccaacagatggcagtaaagtgtcttgaggaaggggcgccttt
ttctaattcacacaaaggcgccgtatgggctagcnctggccctg
>GOLEM_B|GOLEM_B  Nonautonomous DNA transposon.
cagtcatgcgctgcataacgacgtttcggtcaacgatggaccacatatacgacggtggtcccataagatt
ataatggagctgaaaaattcctatcgcctagtgacgttgtagtgcaacatatyactcaktactcacgcgt
ttgtggcgatgctggtgtaaacaaacctactgcgctgccagttgtataaaagtatagcacatacaattat
gtacagtacataatacttgatagtgataataaatgactatgttactggtttatgtatttactatactata
ctttttattattattttagagtrtactccttctacttattaaaaaaaaaagttaactgtaaaacagnctc
aggcaggtccttcaggagatattccagaagaargcatcgttatcataggagatgacagctccatgcatgt
tattgcccctgaagaccttccagtgggacaaaatgtggaggcggaagacagtgatattratgatcctgac
cctgtgtaggcctaggctaatgtgtgtgtttgtgtcttagtttttaacaaaaatnttttaaaaaataaaa
aaatwaaaaatttwwaaatagaaaaaagcttatagaataaggatataaagaaagaaaatatttttgtaca
gctgtacaatgtgtttgtgttttaagctaagtgttattacaaaagagtcaaaagttaaaaatgcaaaagt
ttataaagtaaaaaagttacagtaagctatggttaatttattgctgaaaaarwwwwwwwwwwwwwataaa
wttagtatagcctaagtgtacagtgtttataaagtctacagtagtgtacagtaatgtcctaggccttcac
attcactcaccactcactcactgactcacccagagcaacttccagtcctgcaagctccattcatggtaag
tgcyctatacaggtgtaccattttttatcttttataccgtatttttactgtaccttttctatgtttagat
acacaaatacttaccattgtgttacaattgcctacagtattcagtacagtaacatgctgtacaggtttgt
agcctaggagcaataggctataccayatagcctaggtgtgtagtaggctataccatctaggtttgtgtaa
gtacactctatgatgttcgcacaacgaaattgcctaatgacgcatttctcagaacgtatccccgtcgtta
agcgacgcatgactg
>HAL1|HAL1  Primate HAL1 repetitive element - a consensus sequence.
ccctatagtgaagcccacmacctggcaagccccacccacgcactcagagcttccaagtcgctttttagts
tcccactcttaaatatgagcagacagccaaggatcaccagacatctgaggaaancctctaatatggcaga
caganaaataaaaacagagaaaaacawwntntatccatgaaacaagaayaggatgctataaaaaggaaca
ttcagagaacaaaaagaagctcttggaaattaaaaacgtgagagcagaaattaaaatttcaatagaaggg
ttggaagataaagttgaggaaatctcccagaaagtagaacaaacaaaggataaagatacggaaaatagga
gagaaaagaattaaaaaaattgaggatcagtccaggaggtccaacatccaactaatagaagttccagaaa
gagagaacagagaaaaagatggaagagaaattatcaaagaaataattcaagaaaatttcccagaactgaa
ggacatgaatttccagattgaaaggncccaccgagtgcttaccgcaaaaatgaaggaaaaaaatagaccc
acaccaaggcacatcattgtgaaatttcagaacactgaganaaaaggaaaatcccaaaagcttccagaga
gaaaaaaaggtcacatacaaaggatnagaatcagaatggcatyagacttctcaacagcaacactggaagc
tagaagacaatggagcaatgccttcaaaattctgagggaaaatgatttycaacctagaattctataccca
gccaaactatcaatcaagtgtgagggtagaataaagacattttcagacatgcaagatctcaaaaaattta
cctcccatgcaccctttctcaggaagctactggaggatgtgctccaccaaaacgagggagtaaaccaaga
aagaggaagacatgggatccaggaaacaggggatccaacacaggagagaggtaaagggaattcccaggat
gatggtgaagggaaattccaggatgacagctgtgcagcaggcctagagagcaaccagtccagattggagc
aggaagatggaaggctccaggaggaatgttctcaagaaaatagaanacaaatgaaactgatagattatct
gatgtgtttgaatatattgagaggntatnatttagwcatgtgaaagtttgggggagaattgaattagtga
taggtacanagaaaactaagcaaatgaaaaaaagcaagacaattattaactccagggaaaacaaaaagtt
gtacaagaaaggaaatgtaatcatagtacactacatggctcagctgtgaataacatatttacatagtcat
aataatgtaaacactraatactgatttaaccaaaattatgatataaactatattgggaggataagaaatg
gaaagggtgtgcgtatkgtgtangnggaatgaragaantaaatcctcatcttccatagtaggaagtcart
agataatgtctaaaactgaaaaatcaagaaatagcaatataagcatgttatttagaaatatggaggtaaa
tattccaaaagaatcagctaaaagagttgaaagtggttgcctctggggaaggagctgnaggtggtgaaga
gngnagggacggggaaytgctgttttttataagccttttagtactatttgaccttttaaactatatacat
rtattactttaatttaaaaaantaanttataaaaaagnaaataagta
>TIGGER5_A|TIGGER5_A  transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttaytgaatactgtactgaaagtraraaacagtatggttgtatgggtacttgaagta
cggtttctactgaatgtgtatcgctttcgcaccatcgtaaagttgaaaaatcgtaagttggggaccatct
g
>TIGGER5_B|TIGGER5_B  Non-autonomous DNA transposon - a consensus.
cagatgctcctcgacttacgatggggttacatcccgataaacccatcgtaagttgaaaatattgtaagtc
gaaaatgcatttaatacacctaacctaccgaacatcatagcttagcctagcctaccttaaacatgctcag
aacacttacattagcctacagttgggcaaaatcatctaacacaaagcctattttataataaagtgttgaa
tatctcatgtaatttactgaayayartacactgtagartayyggttgtttaccctcgtgatcgcgcggct
gactgggarctgcggytcactgycgctgcccagcatcgcgacagagtattgtaccgcatatcgcyagcct
gggaaaagatcagaaattcgaagtacggtttctactgaatgcgtatcgctttcgcaccatcgtaaagttg
aaaaatcgtaagttgggaaccatctg
>HERVK22I|HERVK22I  sequence of internal part.
[encoded data, 6887 characters]
actcttcaatcaacaaaacctgatgcaaaaaacagaaaagggggaga
>L1M6_5|L1M6_5  Subfamily of LINE1 repetitive element 5' end - a consensus.
gacatcagcaagatggcggaataggactttccagcgctcgtcctcacagaaacatcaatttgaacaacta
tccacgcacgaaaataccttcacaagagctaaggaaaccaggtgagagattacagyacctgggtgtagca
cagaaataagaaaagacgcattgaagagggtaggaaggacagttttacattacccgcgtcacccctcccc
caancccaggcagcacagcatggagagagataccctctgcttgggggaaggagagggaagtgagcacagg
actttgccttggaccccaaacactaggcccgccccagtaaaacccagtactaggcaggcccccatagccc
cagactccaggccagtacctacggactgagccgyaccagatcccacagcccaggctccaggcctgcctgg
tggactcagtctccaggcctgccccagcaccaggccaaccccagtgccccaggctccagaccggccccag
caccaggccagccccagtagccccaggctccaggctgsccccagcaccaggctggcccccatagccccag
gcttcaggcccaccccagcaccaggctggcccctrcagccctagtcatcaggccagcacctatagaccca
gcctccaggctggcccctgtagacacaggctccaggcctacccagcrccaggccagcccctgtagcccca
ggctccaggcccaccccaggytccagaccagcccagagccaggtyggcccacatagccccaggcttcagg
cctgccccagyaccaggtcagcacccctggcctcagaccttagccaggtaccaggctggcacctgtagac
acaggctccaggcctgcccagtaccaggccagtccctgtggccccaccctccagggcyagcccctgtggc
cccatgctccagcagacccagggttcaggcctgtcccagtagaccccagcactaggctagtccccataga
cccaggctccaggactgtccctgtgtacccaggtcccagggcagcccctatggccccaggacccaggcca
gccctcagagacctagcctctaggccagccctgcagacccagcctccaggctggcacccayagacccaag
ctccaggccatcccccaggttccaggccagcctcagtagctccaggcaccaggctagcacccacagaccc
aggctccagactagccccacgctaccccagcaccaggccagccccaggctccaggctggtccctgtggcc
caggctccagtggacccagggtccaggcctgctccagcagacccagggtccaggcccaccccagtagacc
ctggttccaggctagcccccatggactcaggctccaggaccacccctgcagacccaggctccaggccagc
cccyatggaccaggatccarggcccatytccccagttgcaggctccaggcctgccccagtgccaggccag
cccccatggactcaggctccaggcccatcccagtggacccaggctccaggcccatcccagyaccaggcca
gcccctgyagactcaggctcaaggcccaccccagcaccaggtcagcccctgtggacccaggcttcaggcc
agcccctatagacacaggctccaggccyaccctcatggacccaggctccaggcccayccccacagaccca
atcaacaggtccacccagtggatccaggctccaggcycaaccctgtggacccaggcaccaggcctgccac
ctgctgacccaggcaccaggccagcctgcctaaggactccagcagcaagcctgcctatagaccataccag
atggcctgcccagaatctctggatgactggtgaagggctttcccagacaaagccagtctgcaaagactgg
aataagtccctacttcttcaaatgtgcagacaccaatgcaaggcccaagaatcawgaacaatcagggaaa
catgacaccaccaaaggaacaaaataaatttccagtaactgaccctaaagaaatggagatctatgaactg
cctgacaaagaattcaaaataattgttttaaggaagctcagtgaactwcaagaaaacacagatagacaat
taaatgaaatcag
>ORSL|ORSL  Origin of replication-like (ORS8) region (a consensus).
ycccatacygtttccrtcactrgtytgwgcaccctctgcarggmagacagcatgayttttyatctttgaa
tycyyaaaasttagctcactgtgtgctcaaacgtgtattgaatgacagttgctatatttgaggacbacat
agattttggggaagacggacaggcacactagcagaaccatacgaaggccaggatcagtcatgaccagggc
tgcattatgacttgtgggccctgagcacttttgcttttatgggccccttcctccataaaaatattaaaaa
ttatattttatgactgcattggtataaagatgagaatataatccaggctgaattaaaacattttcttaga
ctctaaaatttcatttttttctgattttaaaagaaattaaaacattttyatggggccctaaagtattgtg
ggccctaggcactgtgcctactgtgcctaatggataagtcnagcctgaccagggcactctggtgtgaggt
tgaagaaaggaaatttggaacaaagaagccaagtgctctggagaagcaggtgaaacttccactgccgaac
aaaatcagaatgggagcagccatggttaataaggttgtggaagtttagascttccagttcacttcmcctt

>L1MC5|L1MC5  3'-end of L1 repeat (subfamily L1MC5) - a consensus.
aaaaaaaaaayacatttctascctttccactgaaaagncctagaaacaatgactaatccaatagcaatga
gtaccctyaggacccagattgtggtctctaaataccatttcccactaaaaggaaccagggctccttggag
aaatggctaattccaggtctggggcaggaaatgtacaagatgagcctggaacatcttgtcataccagata
gcaaggaagctataaaactactagggttgtgtcaaaaggactcaggagccaacttactggccaaagatgg
gacaatttgagcatcaataataactgcaatttaacacatcaaatatrtttaaatccatgagtttataata
aaaaaatctaattggtcacctttggagtgatgctagggaaccaactcattattttgaaaactggtaaata
aagggaaagaatcaagcatttatcttgcctttcctatataaactgtacctcwgggtaaccaaatagtwga
tgagggaaatttctctttatagaagtattccagctaataaatgaagaaaaaattagaattagaatatcac
cattttgcaacccctaatgaattaatggatctaggcaatgatcatcaatggctgctaacatcacaaaaac
tarasatytgcctcctgatggaartawacaacaccacctatgaaatattagtcttgccaaaaaaaaatca
aacctgaatctgatcaagcctctagatctaactaccaatttacaggaaatacagaggacagaggaacatg
ttaaatgacaccatrgggatgcaatcagcaaaatccagactgtgggaaactctacaggacaaatrttaac
ttttcttcaacaaataaattatgagaaaaaaaagatggaagaagaacctatagattaaaagagacttaaa
agacatatcaaccaattacaatgtatggaccttatttggatcctgattcaaamaaatrtaaactataaaa
atatatrtgtatacaattggaaatttgaacactgactagatatttgatgatattaaggaattattgttat
ttttaggtgtgataatggtattatagttattttataaaatagtccttatcttttagagatacatactgaa
atatttatagataaaatkatatgatgtctgggatttgcttcaaaataatccaggagggaggaagtaggtg
gagctatagatgaaacaaaattggccatgaattgataattgttgaagctgggtgatgggtatgtggaagt
tcattatactattctctctacttttgtatatttgaaatttttctaatwttaaaaataaagaccaatttgt
tggacattaatttgttggcaa
>MLT1J|MLT1J  (MLT1j subfamily) - a consensus.
tgtggcagagactgctagttgtcccccaatatccattctccccttcttccttagtaatagaamccccaat
ttttagctgggcacatggccacccagaaataaagactacatttcccagcctcccttgcagctaggtgtgg
ccatgtgactttctaagttctggccaatgagatggtaagcagaagtgatgtgtgcaacttctaggaaatg
tccttaaagagaggggcaygcccttcttttccccttcctccttcctgctgcctggaatgtagatgtgatg
gctggagctctagcagccatcttggaccatgaggtgaaagccacatgctaaggatggcagagcagcaaga
tagaaggagcctgggtccctgagactatggagcagagctgccataccagccctggactgcctacctctag
acttctatatgagagagaaataaattctatcttgtttaagccactgttattttgggttttctgttacttg
cagctaaacctaatcctaacayacca
>HERVFH21|HERVFH21  HERVFH21I endogenous retrorvirus flanked by LTR21s.
[encoded data, 6603 characters]
acctattaaaaggctggaa
>ZOMBI_C|ZOMBI_C  transposon - a consensus.
caggtccacaatcccttatctacaattctaaaatccaaaaagctctgaaaactaaaagtttttttataat
ttgaaactcatttggcagcaaaacctgacctgaactgatatgaggctatttatagtctttatttatccca
cttagtgtgaatattcatatatttcactgcagaaatattaatgtgtttgattatagggtgctgccccaga
ccccactgggggtgttatataatatatagtatatgcactatattacctttctaaaatctaaaaaattctg
aattctgaaacacatctggccccaaggatttcagataagggattgtggacctg
>L1P2_5|L1P2_5  5' part of L1 subfamily in primates - a consensus sequence.
ataaaaaaattaatgagaagaggattctgggaagatggcagagtaggaagcaccaggaatctgtctcccc
acctagacaacaattgcactggcagaatctgtctgatgtaactattttggaactctggagtctattgaag
gcttgcaacttccaggggaaggcttggatggtaaattgtggttaatttcggtcaatttcagctcttagca
cagtagcagctacccatcccccacccccagccccgtggcaggcagctgtgcacgtgttcctggagcagct
tgcacacagcttgcgggagccagggtgggcaaaaaggatcctgtcctccaaatatcggggatctgtgctc
tgatcgctgattgctgcttctgatcacagaggtgcagacaaagaggtggcggccattgttgtcgcacctc
ccyccattgttgcaagcccctccccctctggctgaagtgacttccaggggatttaaagggctagtaccct
ttctccgctttatttttcttttttccccttttgggagccagacattaaagactaggacattcaaaagcaa
ctgcatatacggggaaaattagaaagtcaccgtgcatgcccagggaaaggcacaggctcagaaaagacct
gagaagaccttaagtttacacctcaggctgatccttggcacagagacagcctacaacaataaaaacaaaa
caaaaaaataacaaaaacacagcaaaccctggggaagagggagaatctgatttccagagttaccacatta
ttagattcaaatgtccagttttcaacaacaacaacaaaaaatcacaaggcatacaaagaaacaggaaagt
atggcccattcaaaggaaaaaaaataaatcaacagaaactgtccctgaaaaagacctgatggcagatcta
ctagacaaagactttaaaacaactgtcttaaagatgctcaaagaactaaaggaaaacgtggagaaagtca
agaaaatgat
>MER97|MER97  Primate MER97 repetitive element - a consensus.
caggcagtcctcgctttgcacggttccgatatgcatgaatttcagttaccacggtttagttaaataacac
cagtcccccaacaacacggttcaaatttcagttaccacggtatattaactgtgagtaattgcataaagta
caaacttcgctgctagctcttcagtccacaaatcactacataaataacagatgcgcatcatgatcagtga
ccaatcacatcacttctttcaaagtctgtcggtgattggtcactgtgcatctgttattcagttcatgcac
agacagcaaagcgtgtagttgtgttgcctccttgtctcccagtgataaacccacgtgacattttacaaaa
atggataatcgaaagagggaattggccaacaaagatgaaagtgcagcaaagaaacgaaaagtgataatgc
tggaagtgaaattcgaatcaaacgtaaatggagttatagaagaaatagctgaccgtgggaatgttgacac
tgccgccatttgagagactctagatatgcagccagaggaacttagtgaaggcgaacttatcgacataaat
gaggaaagtggttgtgacgaaaaggatgaagatgtcccagaggaagtgacgccagcaaaaaacttcacat
taaaggaactcttggagatatttcacgacattgaaagcgcaaaggataaaatgttggaagctgatccaaa
cttagaaaggagtatgacaatttgccaaggcatagaaaagatgcttactccgtatcgtaagttatataaa
gaagaagaaggcaagcactgttcaaactactcttgataagttttttttggtttgttttgataagtttttt
tacaaagaaataaaacactttaattctcaatgtttctaatgttttaaattatagtgtactaaataaatat
tagttttattatttttttcattccctatacatttataaccgacggtaagagagtttttaatgtttttgac
aaaaatttttaaaggtcacggaacaattataattttcccattgattattaagatcgctttgcatggtttc
agcttgcatggtcatttttacggtcccgtactaccgtgcaaagcgaggactgcctg
>RICKSHA|RICKSHA  Primate RICKSHA repetitive element - a consensus.
gggtttggatcataatcccgaaagacacaatcccaaacgccataatcccgaatgttgaaatcccgaaaga
tcaaaatcctaaagtctaaatccctaaagtctaaaatccctaatgtctaaaatcccgaaaatcacaatca
cgaaagattaaaatctcaaatattgaaatcctgaaagccgaattctggggaagggattagtgcgttttcg
gttgtacgcaggatagttgcatcatgttagttgcatcatgttaggtggcagaactattaccttgttattg
tctttatttggaaattaagtatggtttaaggagacacgtatgggtgccaagttgacaaggagtggacttg
tggacttaattttaggtgtcaacttgactggattaaggaatacctagaaacctggtaaagcattattttg
ggtgtgtctgtgagggtgtttccagaggagattagtgtgtgagtctgagcggactaggcggggaagatct
gccctcaatgttggcgagcaccatccaatcggccgggggcccggagagaacaaatacagaaggcgaactg
gtctctctctgagagctgggacagatttttcttctgctgccttggacatcagaactctgggcttgctggc
tttggactccaggacttacaccagtcctnnnaaccgggtcctgaggctttcggacctcagactgagagtt
acaccattggcttccctggttctgaggcttttggacttggactgagccatactgccggcatcccagggtc
tccagcttgcagacggcctgtcgtgggacttctcagccaccataatcgcgttagccaattcttctaataa
attccctctcatrtatatatatatcatattggttctgtctctctggagaaccctgattaatacagatttg
gtattggggaagccgaatatcattccttcttactgtattccttacaacataatagaagagatctgtgaaa
ttgttccctcacaaaaaggctgtgataaaataagtggacgaggctactcaattgtgaaagataaaattta
aaagctaattattattggtgctgcaaaagcagaaaatcacttaattacaatggccgagcaataaccagct
tttaaatggacagcatatacttacaaaatttgtagaccacaaccactctgcaaatacacatgcagcaagt
gtcttgaagatggcaamartgaaaattcagtttaaaaatacawsaattscctgccaaattattcaatctg
tatgacttctacttctttacacaaaatttatgctatgtatttcatcttcgcatcatttccaatactggag
gtataaattgtgtagagacttttagagagttctaatttgttttatgcattttttgcaaatttgactccac
gaaagtgcattatcacaatgttgactttgtgtgtaagcattgtgcatgtatgtaaaaacgttgaaacttc
ctcaataaatgaagagatgtcctttttgtacatctgcatttgtgaaagataaaatttctcaagatcttgg
ctctttgggcgactgcatatgcggtggtgacccatcgcggtttttgatcgatctcgtcaaaagacttagg
ttgttcgtcacggtatttcagatgaccgcagttataaagctgggtgcacacaattaccaaccatagtgat
atgcgtttatacatttccctttttgacctatttctttatgaatacggttcgtctgctcataactgttata
cccgtgcgactgtcattagtatacctgagtgtttatgcttgcaaaaatatgtatgttattattgcctatt
ttattgtgtaaagtggcctatgaagtgttctgtcatgtttttatatgtttctcaaataaatcccctttta
aaaatgtaaataaattatcttttaaagaatttttaaattttttttcagaattatattttcgggattttga
tctttcgggatttcaacattcgggattatggcgtttgggattgtgtctttcgggattatgatccaaaccc

>HERVK3I|HERVK3I  sequence of the internal part.
[encoded data, 7313 characters]
ctttcaattaattcataaacagaaagggggata
>MER102|MER102  Interspersed repeat MER102 - a consensus.
gggttgcaaactcaaatgcctacaggggccaggcaggtaacataaatgagtgaagtgggccaggtgggga
ctgtggcaaactggagagcacatgccctgtctaaagggggcagcagctgctactcagctccagccaattg
ttgccatgtgggaatgtaggcccagtgttgccagatcttctgatttttcaagagaagccagaaatctaga
tttttatgtgaaatctcctgatttttaaatgttggcaactaatttaaaatttttawaaaacactgtgtag
gccaaacaaaacatatctgtgggccagatttagcccatrggctgccagtttg
>MLT2E|MLT2E  Interspersed repeat MLT2E - a consensus.
tgctggattgttctgttgtcaacttngttaagctnggaactatgtttcccagaatccccttccctgtatg
gttctgggttagagttggccaaagatgaaattgtggaagatttggaaggcagaagtgaagcagcagccat
tacactctgaaggtcatcattggttasaggcagtgagagatggccagatgcagaggtgcccaggaggttc
cagcttgtcctcactctcccctgctcyatatccagctcttcttcctgaccactggccctgctgaccaaca
gcarccccaggcccaccaccagatgcttggctgcaaactcacagaggtagtngccacacagagncaacaa
ctttccatagagttctccaccagctccccttcatggtcncacttyagcggctggatatgcttagcttcaa
atttccccacaagctccagnctcattcaactncgccagagctggttagtgaccctttttctgatccttca
actcccccctccagaccttcacttccccagctcctcccacaattgtataaggtctaattcctataataaa
tcccttattccatanatactacatagtggctctgcttccctgactganacctgactaataca
>MER103|MER103  Primate MER103 repetitive element - a consensus.
agttccatggtcaaataagtttgggaaatgctgggttaaacaaagttaaacaggtttctttactgcagga
cttctcagagcctttaatatgctaatgtgcattgtgaatctccaagaggggaaatatagtatgcagtrtt
tcccaaatttatttgaccatggaact
>MER104|MER104  Non-autonomous DNA transposon - a consensus.
taccatatttcattgaatctaagatgccatcaattgtaagatgcaccattattttatgtaccactaagaa
agaaaaaaatgctgccaattaaactataacatgccattaattgtaagatgcatcccaatttcagagatgt
taaaatgtgaaaaaatgtgcatcttagaatcgatgaaatatggta
>LTR54|LTR54  Long terminal repeat - a consensus. 
tgttaaataaaatttataggaggccattgttttggactaagctcctgcactaggccccaacagaacagac
caaaccaaaatggagtcactcatgctaaagttccatgtcaccaagctgaaactaagttgtttatctgacc
ttccaagaaatcaggagagagagagagataacagccaaatccccaaacaggccagttttagccagcatga
taaggaagtcccctctgctttaacctttaacctaatgttaagcaatcagttacttntctattgttctgtn
tccctgtnttaaccttacaaggaaagtaactttgaaatgaccaatctgctttttgttctctgtttctgct
ttcttcagcccttttctgtctataaagccaacctcctctgctcagctcatyggaacactcattctatttt
atagaatgaggtrttgcccaattctagaatcacaaataaaagccaattgagatctttaaactaaatttgt
tgtaattttgtcttttgaca
>MER44B|MER44B  Nonautonomous DNA transposon.
cagtagtccctccttatccatgggggatatgttccaagacccccagtggatgcctgaaactrtggatagt
acygaacyctatatatactatgttttttccyatacatacttatgataaagtttaatttataaattaggca
cagtaagagattaacaatantaactaataataaaatagaacaattataacaatatactgtaataaaagtt
atgtgaatgtggtctctctctcaaaatatcttattgtactgtactcacccttnttcttcttgtgatgatg
tgagatgataaaatgcctatgtgatgagatgaagtgaggtgaatgatgtaggcattgtgatgtagcgtta
ggctactattgaccttctgatgtctgatgatatgtcagaaggaggatcatctgcttcaggtgatcctgga
tcattgagccatgacaatgtcgatggttggatgtcaggagcagacaatgtcgatgactaatgggtggrta
gcatatacagcntggatacgctggacaaagggatgattcacgtcccaggtrggatggagcaggacagtgt
gagatttcasccatcatgctactcagaacaatacacaatttaaaacttatgaattgtttatttctggaat
tttccatttaatattttcagaccacagttgacyatgggtaactgaaaccacagaaagtnaaaccayrgat
aagggagaactactgtaca
>HERVL68|HERVL68  Primate HERVL68 repetitive element - a consensus.
gcactrtntgggannnttnntggaanggaagaagagggaagatggatgacaaaattatgcctgggtvgct
atggagttattcatggtatraaayagcagctragctgctgtctgttatgagaggtaaaagttacctgtgr
aatttgaaaatgatagatccaatcacagagagttggcnysctggatcccytggctgcttttggccwtkct
ggctaaagtnaggaaraarcacancycarrtgatgtctttggtttttgttctytcctccarktgggagga
gaaagggcccaaacattccnaaangtgagcttnntwtgsaswaaagwyawwaacaktwnnttgnagttnt
cttctccaggtggnaggngnaangrtcngaaaantnctnnaggcnngnwttgagtgrrccaaraatgtta
aaagtttgcattgctctctcctccaagtggaagraaaaargttaaatcagttcccagggctggagyaang
ctttagataaaccagaggaggagaaaaagtaaaaaaaaagcccnccaaacaagwaaaccactctagccnt
ttctacagcttagctgctgcyacagcaactcaacnccctcctttcmctacaaccttcanctccagcanct
gtaatgttaaccytgtaaadtgctnaatttactgctaggggtttgantaaacatghaatgagtaaaaaga
aggaaatnattatwgaatsrctttgtattttgtggctattgcatctggatgtatgataaaaattratgta
aaatgttatatgcttgtaatttcataaatgctagaggaatcatcctaatmgggaaagctgcaaagaaaaa
aaagttagtggnawcacaactcccttgctttytgctgcyggtgggtggattggaatttaaactctttgag
tattggaaasagaacaagtctccataactgatgatttttgcctattggarcctctgnaaaaagggagaca
acatnaaaagagaggcaatctccagatggagatacacttttggagttttaaaaanyagtttttagtttgc
taatgwgctcttgytgaaatgagatgtctgacccttagaggctgatgattttcagcctgatgtgcatgat
ttttgagggggtcaatttggactctaaractgacaagataaaaaggmctyttagaaaagccttgcttgtc
acttggacttggaatacagctgtctggntcttcagtntctcagctttgctgctgctgaagaaaagccact
ggcttttttggaatcctgaattcacagatcctaattgcctgtacctgactctaagctgaaacctcatact
gtctgctgtgrgctgtttcagcctcgngntgagctgtgctgaactgaaatnngntgaaatggctcgactc
aatgaacagaactcagactctgggactgttgcagatttaggaccaccctctgtggggccataaactatga
aaacatcacggatgctggctggactgtctgggtcacatacagatgcccacaggaaagggcttgttctctg
atgggaccatctaaaattgagctgctgattggctctatatttctgatacagagactaattgcattcttaa
cttgtgatttctgtcgaaagctgcaagttgggggagggcacattacaagaagtgtgacccctccacccac
tcctgacagattggacttgaccccctctcggggatgtctcactgctattgacttgttgtgttcggctttc
tggattagttgcagtttgcaacaatggactgacagcctgagtctacttccctcacctttctcctggtaca
cacatcttagtgagacagtttgattattaaatgcagctgtccccagaaagggattgatcttttttttcct
aggctgctcaccggataaatgatcaggacgaaaagggtgggaaggttatgtaaactcattttgaaaaatt
ttgaaaattcagaattcatcctgaccaatttctgaacatgatgtgtctttccggttaagttgtataaaaa
tgtttttctataaaaatgtttttgtccctcttgcatacaacccttccagacaaaaggtctgggtgagagt
aagagatgattggagaaatatgaagttaagattgtaagttatgaatattgctgaatgggacacactgatt
ttgtaacaacggagaaaaaagaaaaacctatggaggcacggggtgtgagagagggcattaatgatctttg
tttttcagaactgctcctggaagctttcccctcttcctgaagaaaaattccccatgctgcctttccaagc
tgctgcgagcgctttgaattcaaactgactgctgagcctaagatcacacctgacagcgctgactatgaga
cagcagggggtggccccagctcctgcactttccacgaagaacacctccagatgtcatccacacacatgag
acggatgaactggtgtcatggacaagcaaaactgtttggaactgactgcctttaggcagtccctctgaaa
ccaaggactaaactgaattaattggactagactctttgggagtagtccccgtggtaagaggccacactgg
ggaccctgttaacctgtactgcctgactaatgtatgtcctgcttggggtaccctaacaattgtaaactct
ttgtttccaggggtaccacgtgtgccctctgggattgtacttttatgtgtaccctgactatcatgacact
gcctcagccctggaaggctttcaggtcagcttcaacttactggccagagttgtgctgtgcctgaattgat
gcctcaggccaraaaaaaaaaggttaatacagaaacttaaggaggaagccacctggctttctaagataga
cctttatggttaatgggatttgttttaactggctaaattcaggacccctaaagggcataaactgagatca
atactgcaggttggtctcaccctgctgcgtggggtcctactgataataattttgctgtaaagatgccttg
gccaagggggtggactgtgcagaagag
>MLT2F|MLT2F  Long terminal repeat MLT2F - a consensus.
tgtggtggctttgtaatgtgtcaacttggctaggctggaactacatttcccagaattcccttccctgtat
rkttccaggttagggtgggccacaagagacattctgtgtgagatttggaaggcggaagtgaagcagcagc
cattttgttttctgtgctcggagaggtcagagtcagcaggcgctgttgcagctcacacacgttgtcgctk
atctgctggctcacctcgttggcgtggggcagcagccgggcccgcagctgctccascttcccctggatcc
tccttcagcttctccgactcctgggccaggtgtgtgtktagctccgtgacgaagggcgccagcttctcct
gcaggacacccacatcatcgaggtcggaggcagtgagagactgacatgggttccagtttgtcctcgtggg
ttccagctcatgcttgtgggttccagcttgtccttgctctcccccactttatatccatcttcccttcctg
actgcctgccctgtggacttcaagctccagcatcagacgcaragacaacagccttacagagactgcttaa
ccagctcccacaattgcgtaaggtcaaatccctataataaatctcttattatatatatctcctagtggtt
ctgcttctctgattgaaccctgactgataca
>HERV18|HERV18  Endogenous retrovirus HERV18, internal part - a consensus.
[encoded data, 6603 characters]
grtg
>HERVK11I|HERVK11I  It is flanked by MER11 LTRs.
[encoded data, 6461 characters]
agaacgaacaagccttcatcgccatggcacatttatataaaaagaaagggagaga
>HERVK9I|HERVK9I  HERVK-related endogenous retrovirus.  It is flanked by MER9 LTRs.
[encoded data, 6032 characters]
>HSRIRT|HSRIRT  Partial internal sequence of endogenous retrovirus HSRIRT.
tttctggtggcccatatggggattggagataacagatttactgtctcctttgcccatgggactagggccc
tggggctgtggaagacctggcatccaaggcatgccatgggggagtttcacccggacggagactggctctc
cccgcatcctgcccagcagtgcaactgaacctgagatggggctgcaggatgacaccagcacttcaggaac
cgcgttgcaggtgtcacaccttggattcaccatagctggctgaaactagcagcagcagtgactcccgact
atgaccagtggattaaccaacaagaccctgattgccccacccgaatagacctacggcgaatcccaaccac
cagtaagaaggacaactgccctgctctgaccacactggaggctggtcagtctacacatggctgaagcttg
aagatcttgcaagctcttgctcttagtcacatctggaagctgactagtctacacacagccgaagctaaga
ggaccactctagataagtaaatgtagataaaatttataagcctagttataattgttctgttgttacatta
ttactgcaaatgctgcaaatgtccatgcccagaggaaggtttgccattcctgtgtgtagtgtaagcatgt
ttctattacatacactaatgttgttaccatttctgcctatactagaaggggagaaatctctagaaggatg
cccacactgtgtacatactacctgggtaaggaataccatagttaaaactctactgtaccatacctacagt
acaggaaccaagttaggaacctgcacatacaaccagaccacctattcggtctgtgacccaggaaataatc
agctatatgtatgttatgaccctaagctcttaccctatgaattctggtttgaaatacatattaaatcaga
gggagaaaaagaaggagagttatagctcgaacaaaagaagcccctccctcctgtaaagggcctatttcct
tgtactttgatgcctgctatgctgcatatgttcacaatcctaaaaaaaaaccagaagccagtctgcaatg
gtgtaacacaagagaggcttagcaggagcagccctaagcatctgtacaaagaaccacaaatcggatgccc
agactgtaacattcagtggtccacactaacacaactccaatatttatattcaggaaggagtgctctgcta
agtagtatgttaaccaaaccaaactgtaagacaagaacatgcaatcctttacattttactatcttaaagc
cagagatacctttctggtctacaggacagacagcactataacgacttgatagactaggagcaggccttgg
agttccactactaattgtcaaaaagactaaaaggactcaaatgcatccaaccccgcaattctgggtccat
aatcattctataagcatttggataagccagtgcctgagcttcccccaccaaccaaaaacttatttgctca
actagctgaaaacatagctggcagcttaggaatttcctcatgctatgtacgtggaggaactaatatgggg
aaccagtggccatgggaggcaaaggaattaatgccacaagataacttcacttcgcttaaccctgccagtg
aaccaacagcctcagccagtgtttggttgttaaaaacctccataattggaaagtaccgtatcgccgttgg
gaaaggctttcacagaggcagtaggagaaataacctgcctaggcaacagtattatgatgagactaaaaac
aaaactctatggagaagcacccagaattactcctacttaccagatccaaatcctttatctccattctcta
ccctaagccacacttggcatcaactagaggttccaaatgcttcgaaagcaccctctggcctatattggat
ctgtggagcatgggcatattggcaactgccagctaaatggacaggagcatgtgtgtagtaacaatcaagc
cattcttctttctaattcctctaaagcaaggggaactcttatggtatccagttgatgatgaaaataaaag
aagaactagaagagcataatcacaaaaatagacacaaatgtcaaaaaggatgtggacataggagactgga
aagataatgaatggcctcctgaaagaataattaaatattattggccagctacctgggtgcaagatgggtc
atggggttaccacaccccaatctatatgctcaactgcatcataaggttgcaggcagtctttgaaattata
accaatgaaacatcaagggcactagatttattggcaatacaagcaacacaaatgagaaatgctatatatt
gaaatagattggcattagattatcacttagcctctgaaggaagagtatgtggaaaatttaatttaaccaa
ctgttgcctagaaattgctaataatggccgggttgtcatggaaatcagagctagaatgcacaagttggcc
catgttccaattcagacttggtcctaatggtccctggattctttgtttggaggatggttctcaacctttg
gaggattcaaaaccctcactggtgggtttttgtttattcttggcatctgcctcatcctcccttacctttt
acccctgtttattaggaggattcagtcaactatagaggcagtaataactcaacacactaccgcacagttg
atggcattaaccaaatatcagccactgccagtagaagaagctcagctctgtgaagaggtggcaaatagtg
gtgctttctattaacacctttgttataaaaagcagcaaagggggaaa
>HERVK3I|HERVK3I  sequence of the internal part.
[encoded data, 7313 characters]
ctttcaattaattcataaacagaaagggggata
>LTR63|LTR63  Putative LTR from human endogenous retrovirus - a consensus.
tgttagagtaggcagatagccagacatgagcaggagnggaagcccctgrgaaaaggaaggtctggaaaat
ctcacacccsagagaccacccaaaanatacataytagatatgagcagagangaggggaaatacctatgca
gaaaaaaatgccccttaagatgcccagtaatcattcactctgcagttaaactgtcagaatgttgctagct
acatgctgataagggaagagggcaaaggagaaattcctaagagataygcaggtgcagtaagtacagattt
gaccactatacaaccttcctggggtggcagtaatgagcaatgcmgccattaggtagrattcatatccaac
accgggtccgtgcatgcgcatcaaccaacagtaagggaggvtcccacaagcctgggtaggaactaggtgg
ggaaargcagggacttaaggcagaagcaggaaaactagasaaagaaaaaggtggagacttaagacagagg
tgggaacttcaaraaaaatcygacatcataaaaaccccgtgcagactctcagggctgctgctggctcact
ctctttcagcagcccrctctgcctca
>MER109|MER109  Interspersed repeat - a consensus.
aaagactagatntttcanatyagaacttaannttgtccactatatacacagcantgttaaataaaatngc
acacacataacaatggttanaatctgaaatatcttctaaatatgaacattttggcctagaacctttcttt
tctcacttccttctctctgccttcaantcagtggacaagtatangcatgtgtaatgctctagagatggtt
taacaaatttatatccaaaagtcatttccagaagacaanccttnctatraantttaacaaaaagtktaca
aaaggtgctaattctactangtnctttgtcatacactggcagcctctttaacatctagagactagatgtt
gcaaaattaggactcatttgtccattatatacacnatatacaaagcaaaacaaaatgcacaanacataca
gaacaagagttcctgaaaatgtgcaattatnaacacactggcacadaaccnttcgcacttccttctctcc
canctcctctaaaccactgaataagcacagacantaatatacngctcaaagagatggtttaacaattcca
ttyccmaaagacagtntttcctrtgaattttanntaaaagtnacttaaagngtgttattttactacctct
acatttaacatacattangcacttcnraacatctagaaagactagatrtttcaaanaagnacttaatttg
tccactatatgtacagtagcattgaataaattgcacacatataacaatggttataatttgaaagtgtctt
ctaaatatgamcattctggcctaaaacccttcccatctccatcaacycagtggacaataatgctcaagtt
ttcagaagacantctttnctatganttttaangcaaaatgtacaaaattattagtttactaactctactt
ttgtcatacactggcaacctctttaacatctagaaagactagatgttgtaaaattaggacttgtttgtcc
tttatatacactatatacacagataagtaaaataaaatgcacagacataagagacaatggttaatcttgc
ctcactgtaaacacantgntggcataganctctttgcacttccttctcctgcctcctcccctgaaccagt
gcacaaacacaatgtgtaytactcaagaggtggtttggccattcccccaaagacaacatttcatatgaat
tttaacaaaaagatatttacaaaatgtattattttactacntctactttnaacatatatcaggcacttca
gaacatctagaaagactagatatttcaaaaaaatacttagcattgtcaacgatatatacagtagtgagga
ataaaatgcacacaaaacaatggttataatatgaaaatgtcttctaartatgaccagtctggnaaagaac
cttcttctcttcattctcacgccttctgctccatgkcctctaacccactgaatgaacgtggtsgtgtntg
ttgctcctggtgtcacttctagagctcgtctaacaatttcgtttcnaaaagtcatttccagaagacattt
rttttctankattttttaaaanaaaaaagggcatttacaagacgtgnnattttctaact
>MER62|MER62  Repetitive sequence MER62, 5' end of L1.
caaagaaatgtatktwtgcaggagggcttcaagatggctgactagaggcatctgatacttacctcctcca
caaagaagaaccaaaatagyaagtagataatcacactttgaatagatcatctaagagagaacactggaat
tcaacagagaagtgacaggaaacacctaaagcaaggaagragaaggaagtgaggcagcctgattggctgg
gagcctggagaggctcccyaatgcagggaaagggtaagtgagagacccccagtggtccacattcccacca
tagactcttacaatcctagccatgagagagcccctcaaccctcatgggccctgagactaacatagagctg
cctggagantgtgtgatggcattgctccagagagngagctcacactgggtcccacamacccccaagtcct
aagcagctgcagcatggtaccattttgagagcctagcccccaccagactgcatcctgccctgggrccaaa
aatcttccctatctccacattcctggagccccagtgatatnccccacccatggctgcagctgctggggca
raggcaggaaccactggcagcaabcccwcccctgcccagcagaggggtggccayacaatttcatayacac
caaggacaaattcccctgmctgcaaatgctaccactgngagctgctgtggagctgagryanaagcaatgc
acmcgctacccaggcrcctgcctatggctgctnccacagaaagcaaccccaccctccccagcagcagggc
cacagtgcagccactgctgccctccacctgagcattccaccaggggcctggggatcaccctgcccctcga
ctactacagccagtacctgcatacaccactrggaggcctgaggacaggtctgcccagcccagctctgcca
natcccccagtacccaagcacctatctaggggcctggggattgcccaacccaatctaccaccrktggcat
ctgagcactcctcctggggtctgaggatnggcctactcaacctgctactaccaccacagctggcacccac
ccacatgtaccacctgcaggcctggggactggccyrcccagcctgtngcanccactgccaacacmaacat
ggantgcttggnacccagagggttgtcccacccyactactgccatcrcycataccatgcncgctgcccag
gggctaagaacctntctacccacctrgcccacctctgctattyctggcacccaagcaagccacctggagg
cccaagaatcagcctgcctggaccyactaacaycagtgccaatatacrccrctctgggacccaaggacag
gcacactcagccwacyawtgccaccactggkgcctgaagactggcccacytggcatcccagtccccagca
aaaywtcaccacagcttccactaacaaccrcaccctaagccactaaggaaatcacagacaccaytgatrc
tgtttacarctaaagaaatcatatggagactacactacttcaygcacmcaga
>L1MCC_5|L1MCC_5  Primate L1MCC_5 LINE1 repetitive element - a consensus.
gggggaagaacagaagcaaaagccttctscycnygngraagggcagrraacwntntyaggyncaggatnn
tgcantgatacaaancagaggtcwgctactactgggagaggnacaggtcccatcccaaccacagatacaa
ggagagtttgactgccatggagagaggggcaggaacactgagaaagccccactcctgaggcccaggcgca
cagggcctgcctaagactgaggctggaccaggacaacagagaacatccctnctcccaccacaagcctaac
aagcaccaagtaacamagcaacagcagtctaccactgggggagggnnannannatggagagagactccct
ctgtggcacaggtatgcagggactactgaaagctgagggtggagcaggaacactgagaaaaaccctctag
caaaccagcccccacactaagcacaaggtaacagcagcccaccactagaggaatttgaagcctgtggtgc
actgarggtaaccatagcaacaacaaaacccaaacccagctcaactcctgactagattgactcaaccccc
acactaaaagcctagcagaagaaaaggcatgcccatttccaggcataaatactatttacctcagtctcta
ctgttcttctacacataatgtctrgcattcaataaaaaattacaagacananaaaaaaagnaaaaaaaaa
caacccattgtcaagagacaaagcaatcaacagaaccagactcagatatgacacagatgttggaattatc
agacaaagaatttaaaataactatgattaatatgttaaaggatctaatggaaaaanggtagacaacatgc
aagaacagatgggtaatttcagcagagagatggaaactat
>LOOPER|LOOPER  Molecular fossils of autonomous DNA transposon - a consensus sequence.
ccttyagaayaycatcaggtcttgnannnnnttttatttttgagtttttahttgtaactatttdtaagga
tattttatgncntttattctttcaaagaacwrargaaanatgnctgaataaanctcantnnagctngtan
ttaannatagnntgaganatcttnatgancctattttttccattttgctatttnatcttnctaggnatta
tttyatcattactantcaattntttctaactgtgctnwtataaaaagactaaaataataagaaaatggaa
gaatgatnaaacctcctgggatgaaataaataaatcatcactatgacatcatccttcagttttcttactg
tgttgcccaaagtattgcatatctttcaagaagggtataaaagaagtctggagacaccatctttgwagtc
tttttttagctttcattgaacacagttgagaattcagaatttttcattttctacccataatggcaaagag
aaaaaaattgacagaggaaacaattattagatgaatcagaagatgaatgcaaagagamagatagcagcac
tctagactctaatgatgatggtgaaattgatcatataagtgaaatctcagactatgagtcttcagatgat
gatatcctagatraattttctcaaactcaagaatcgacgagtgaacaatatatttctaaggacaaaaagg
aaatatggtattctcatccagttagtcattcaacaggaaggacttcatcacgcaatattttgcgacaaga
acctggaccatcccattttgctaaaaggacatgtgacagtattctttcatcttttatgatgtttgtgcac
caaatttactacagtttgtaagtggacaaatgctaaaggcaggtcaaaaggtaactggaaggaaatagat
gaagagaaraaaaaawtcattgaattgatcattctaattggtgtttataaatctaaaaatgaaaatgttt
tgcagttatggagcaaagaagatgrctctcttcaacaaaattatgagccctcaaaattttcaaaagtatt
acgttttgacaatgtaaatatggaagaaaagacaagaaataataataagctagaacctattagagatgta
tttgaaatctggaatcaatatttacaaaatagatatgttccaggctcatccatgacagttgatgagcagt
tagttgcattcaaaggacgttgcccatttcggatatatataccttcaaaaccaggaaaatacggaataaa
gaatggaattacaattttgggttataattcaaattaaaatttttaatgaagtttttttacaattccttaa
ttcttcttctgtaaattattcgtaaaatgacttaaatataaaaaaataaaaagagttcattggacccaga
tggtaaatgatgatgactgtttttccttggtgtascgaggg
>LTR6|LTR6  LTR from  human SSAV-related endogenous retroviral LTR-like element.
tggccagattcctgcttagattcatcactcacatcaaaaaggccaacagagcccaacaagaaacataggt
ccccaagcataggccaggccccttaaaactgtgcctaagtcgagtgaagcctttagattaattcttttta
tttatctctcttgtttatttccacctgttatgccctccgtgccttcctattcttctcacttctttcacga
caggacgtgtatttgcaaacactacttggaaggcaagaacctccaagaaagtctcttttgcagtcgattt
atgtgctttgttcccagagcctgcccataaccttgaagaacaatgcaacctgccggtcatagaagcgggg
aacatcaaccttgctacagggttcggacacacaggaagccggactggatgtaaaaactctaaaagtgaaa
aaaaaaggactccagagcattgacttttacctctgtcctaaaaatcaccctgactctagttgtcacgatt
cttaccaatttttctgccctcactggttttgtgtgaccctagcca
>HERVS71|HERVS71  Internal sequence of endogenous retrovirus HERVS71.
[encoded data, 5538 characters]
gtcatcctcaccacgccgatggctctgaaag
>PRIMA41|PRIMA41  a consensus.
[encoded data, 7810 characters]
cgtccctctgcaacccttaggattaagggtcttcttgtaaagggaggggggagata
>MARNA|MARNA  Human non-autonomous mariner-like element.
ttatacatccaaatgaatgttntcnttcaaagtagtcaccttgggaaagctatacatttatttttaaccn
awcacaattctgccattgatcaaaacatttttggaacttctcttttggaattgccttcagaaccagttta
tgagccacataagaaaatcagtctcattactttatagtcacacctcatttttgaccaaaaatagtattac
ccagtttgatcacccaccttattcaccagacttggctctgaatgacttttggctgtttccaaaaatcaaa
tccaccctcaaaggataaaganaagatttgccaccattgaggatattcaaaagaatatgctgcaggctct
gaaggcaattccaaaaagaatgttccaaaaatgttttgagcaatggcagcatcattggaataagtgcata
gcttcccaaggtaattattttgaaggggacaactctcatttggatgtataa
>MER119|MER119  Medium reiteration frequency repetitive element - a consensus. 
tagagcagaggttcccaaactttctcagttcatagtgcccttagtgtctcagtaattttttcatagtgcc
cttaggcagtgtctcagtaattttttcatggcacccctaggccaaaagaaatacctaacagttcyattta
ttaagtagttaggtccaaacaacttaataagtatttatgtcctaacaacttagtagccatttgaaaaaat
aatacacataaattgaaagaaaaaaaaaaaatatttttatttcattcttaaataaccacaattacttact
aatgggatgtgtgtgcctgttgggcactgcacaacttctcaaaccttggaatcagattggacactgccac
cctcatttcctgttccacattgattgnttttcacatagtacttgctttttatcacagcaaccactgaaaa
cccagcttcacaaagatatgatatcatcaaaaggaatgtagcacacatgatctaatgttgaaactgtgaa
ctacctcaagctagtagt
>HAL1|HAL1  HAL1 repetitive element - a consensus sequence.
ccctatagtgaagcccacmacctggcaagccccacccacgcactcagagcttccaagtcgctttttagts
tcccactcttaaatatgagcagacagccaaggatcaccagacatctgaggaaancctctaatatggcaga
caganaaataaaaacagagaaaaacawwntntatccatgaaacaagaayaggatgctataaaaaggaaca
ttcagagaacaaaaagaagctcttggaaattaaaaacgtgagagcagaaattaaaatttcaatagaaggg
ttggaagataaagttgaggaaatctcccagaaagtagaacaaacaaaggataaagatacggaaaatagga
gagaaaagaattaaaaaaattgaggatcagtccaggaggtccaacatccaactaatagaagttccagaaa
gagagaacagagaaaaagatggaagagaaattatcaaagaaataattcaagaaaatttcccagaactgaa
ggacatgaatttccagattgaaaggncccaccgagtgcttaccgcaaaaatgaaggaaaaaaatagaccc
acaccaaggcacatcattgtgaaatttcagaacactgaganaaaaggaaaatcccaaaagcttccagaga
gaaaaaaaggtcacatacaaaggatnagaatcagaatggcatyagacttctcaacagcaacactggaagc
tagaagacaatggagcaatgccttcaaaattctgagggaaaatgatttycaacctagaattctataccca
gccaaactatcaatcaagtgtgagggtagaataaagacattttcagacatgcaagatctcaaaaaattta
cctcccatgcaccctttctcaggaagctactggaggatgtgctccaccaaaacgagggagtaaaccaaga
aagaggaagacatgggatccaggaaacaggggatccaacacaggagagaggtaaagggaattcccaggat
gatggtgaagggaaattccaggatgacagctgtgcagcaggcctagagagcaaccagtccagattggagc
aggaagatggaaggctccaggaggaatgttctcaagaaaatagaanacaaatgaaactgatagattatct
gatgtgtttgaatatattgagaggntatnatttagwcatgtgaaagtttgggggagaattgaattagtga
taggtacanagaaaactaagcaaatgaaaaaaagcaagacaattattaactccagggaaaacaaaaagtt
gtacaagaaaggaaatgtaatcatagtacactacatggctcagctgtgaataacatatttacatagtcat
aataatgtaaacactraatactgatttaaccaaaattatgatataaactatattgggaggataagaaatg
gaaagggtgtgcgtatkgtgtangnggaatgaragaantaaatcctcatcttccatagtaggaagtcart
agataatgtctaaaactgaaaaatcaagaaatagcaatataagcatgttatttagaaatatggaggtaaa
tattccaaaagaatcagctaaaagagttgaaagtggttgcctctggggaaggagctgnaggtggtgaaga
gngnagggacggggaaytgctgttttttataagccttttagtactatttgaccttttaaactatatacat
rtattactttaatttaaaaaantaanttataaaaaagnaaataagta
>MLT1G2|MLT1G2  MLT1G2 subfamily - a consensus.
tggtgatttttanaamanngctcaaattccttgacactcctntcatcaagaggtggagtctatgtctcct
gnctccttttgaatctgggtgggcttgngattgcttyaaccagtagaatgcagcagaagtgatactntgt
gacttctragrctaggtcataaaaggcaatgcagcttctgacttgtttcttggaacncttgctcttggar
accctaagccaccgtgtaagaagtctgactvcnctgaggctgccatgctgtgaggaagcccaagccacat
ggagaggccatgtgtaggtgttttaggctgacagtcccagctgagcccagccatccaagcaccagacatg
taagtgaagaagcctncagatgattccagcccccagccattgagtcacccccaggcctttgagtcttccc
agctgaggccccagacattgtggagcagagacaagtcatccctnctgtgngccctgtccaaattcctgac
ccacagaatctgtgagcataataaaatggttgttttaagccactaagttttggggtngtttgttatgcag
caatagataactaaaaca
>L1ME_ORF2|L1ME_ORF2  Primate L1ME LINE1 repetitive element - a consensus.
atggcagacntaaancctaacatatcaatrmttacattaaatgtaaatggattaaacactccaatcaaaa
gatacagattgtcagagtggataaaaaaacaacacccaacaatatacwgcctatmagagacacaccttaa
atataaagacacasataggttgaaartaaaagaatggaaaaagatataccatgcaaatwgtaaccaagag
aaagccggagtggctatattaatatcagacaaagtagactttaaaccaagaaatattactagagataaag
agggacatttcataatgataaaagggtcaatctatcagaaagacataataattataaatgtatatgcacc
taataacagagcctcaaaatacatgaagcaaaaactgacagaactgaagggggaaatagacaaatccaca
attatagttggagacttcaacatccctctctcagtaattgayagaacaactagacagaatatcagtaaag
aagtagaggatttraacaacactataaamcaantagacctaaytgacatttatagaacactntacccaac
aacagcagaatacacattcttttcaagtgcacatggaatattcaccaagatagaccatatgctgggccat
aaaacaagyctcaawaaatttcaaaagactgaaattwtannaagtatgttttctgaccacartggaatta
aattagaaatcaataacaraaggacatttagaaaatcyccaaatatttggaaattaaacaatacacttct
aaataaccmataggtcaaagaagaaatcacaakggaaattaraaaatattttgaaatgaatgayaatgaa
aatacaacatatcaaaacttgtgggatgcagctaaagcagtacttagagggaaatttatagcattaaatg
cctacattaaraaataggaaagatckaaaattaatgatntaactttgtacctcaagaaactagaaaaaga
agagcaaantaaacccaaagtaaawanaagaaaggaaataataaagataaaagcagaaatnaataarata
gaaatargaaaataanannngaaaatcaacgaaaccaaaagttgkttctttgaaaagattrataaaattg
ataaacctctagcaagactgacaaagaagaaaatagacaagatacaaataaacgcaatcaggaatgaaag
aggagacatcactacagatcccatggaaattaaaagaataataagagantantatgaacaattatatgcc
aacaaatttgataacttagangaaatagataaattcctngaaacatacaaactaccaaaactgactcaaa
aagaaatagaaaatctgaacagccctataatnattaaggaaattaaatcagtaataaaaaanctcccnac
aaagaaaantccaggaccagatggcttcactgctgaattctaccaaacatttaaagaagaattaacacca
attcttcacaatttcttccaaaaaatagaagargagggaacacttcccaactcattttatgaggccagca
ttaccctgataccaaaaccagataaagacattacaanaaaagaaaactacagaccaatatttctcatgna
catagatgcaaaaatcctcaacaaaatactagcaaaccaaatccaacagcacatgaaaaggattatacac
catgaccaagtgggatttatcccagggatgcaaggctggtttaacatayaaaaatcaaycaatgtgatwc
actacatyaacagrntaaaggagaaaaatcatatgatcatctcaatagatgcagaaaaagcatttgacaa
aattcaacatccattcatgataaaaactctcaataaactaggaatagaaaggaacttcctcaanataata
aaggnmatatatgacaaacctacagctaacatcatacttaatggtgaaaaactgaaagcwtttcccctaa
gatcaggaanaagacaaggatgtctactctcaccatttctattcaacattgtactggaagtcctagccag
tgcaataaggcaagagaaagaaataaaaggcatacagattggaaaggaagaagtaaaactgtctttattk
gcagatgacatgattttntatatagaaaatyctaaagaatccacaaaaaaacwactagaactaataaata
aatttagcaagntcncaggatacaaggtcaatatacaaaaatcaattgtatttctatatactagcaacga
acaatntgaaaatgaaattaagaaaacaatwccatttacaatagcatcaaaaaaataaaatacttaggaa
taaatttaacaaaatayatrcaagacttgtacgctgaaaactacaaaacattgatgaaagaaattwaaga
agacctaaataaatggagagatataccatgttcatggattggaagactcaatattgttaagatgkcaata
ctccccaaattgatctatagattcaatacaatcccaatcaaaatcccaatggttttttttgtagaaattg
acaarctgattctaaaatttatatggaaatgcaaaggatccagaatagccaaaacaattttgagaaagaa
gaacaaagttggaggactcacattacctgatttcaaaacttactayaaagctacagtaatcaagacagtg
tggtattggtataaggatagacatatagatcaatggaacagaatagagaacccagaaatagacccacaca
tatatggtcaaytaatttttgacaaaggtgccaaggcaattcaatggggaaagaatagtcttttcaacaa
atggtgctggaacaactggatatccatatgcaaaaaaatgaasttmgacccctacctcacaccatataca
aaaattaactcaaaatggatyatagacctaaatgtaaaanctaaaactataaaactyttagaagaaaaca
taggagaaaatcttcgtgaccttgggytaggcaawgatttcttagatatgacacmaaaagcacaagcaac
aaaaggaaaaattgataaattggacttcatcaaaattaaaaacttctgctcttcaaaagacacyatcaag
aaaatgaaaagacaagccacagactgggagaaaatatttgcaaawcatatatctgacaaaggacttgtat
ccagaatatataaagaactcttacaactcaataataaaaagacaaataacccaattaaaaaatgggcaaa
ggayttgaacagacatttcwccagagaagatatacaaatggccaataagcacatgaaaagatgctcaaca
tca
