>PRE1_SS   Sus scrofa repetitive dna sequence element PRE-1.
agggagttcccatcgtggctcagtggtaacgaacctgactagtatccatgaggatgcagattcaatccct
ggccttnctcagtgggttaaggatccngcattgctgtgagntgtggtgtaggtcncagatgcggctcgga
tcccgtgttgctgtggctgtggtgtaggccggcagctacagctccgattngacccctagcctgggaacct
ccatatgccgcgggtgnggccct
>SSMER1   Pig mitochondrial aspartate aminotransferase mRNA, complete cds.
tgtcttatttaagaaataaagaggagctcctttgcagcacagtgggttaaggatccagtgtagtcactgc
tgtggcgcgggttcagtccctggcccaggaacttccacatgccatgggcacagctttaaaaaaaacgaaa
aaggaagaggcgctttttttagcacatggaggcaact
>SSSINE1   S.scrofa SINE sequence.
aacacctgaaagagccaactctacccacctgcattcaacccttacgccttaggcctcctcaagactacac
ttggcaggagttcccgttgtagcttagtggttaacgaatccgactaggaaccatgaggttgcgggttaag
gatccagtgttgccgtgagctgtggtgtagttgcaaacgtggctcggatcctgcgttgctgtggctctgg
cgtagccggtgactacgctcgattcgaccctagcctgggaacctctatatgctgtaggagtggcccaaga
aatggcaaaaagacaaaaaaaaaaaaaaaaagataacacctggaaaga
>CLOXA_CS   Cut repeat region I,II and III.
tcccggcaggtgaaggaacagttgatcaagcacaatattggacagcgcattttcggacattatgtcttgg
gactgtctcaagggtctgtgagcgagattctggcccggcccaagccatggaataaactgaccgttcgcgg
caaggagccctttcacaagatgaagcagttcctctcggatgagcaaaacatcttggctcttcgcagcatc
caaggcagacaaagagagaatccaggccagagcctgaacagactatttcaggaagtaccgaaacgaagaa
atgggtccgaaggtaacatcacaacccggatccgagcctccgagaccggatccgacgaagcaatcaagtc
catcctggaacaagccaaaagggagctgcaggtccagaaaactgcagagccggcccagccttcttccacg
tccagcagcgggacgtcagacgacgccatccgctccatcctgcagcaggcccgccgcgagatggaggccc
agcaggccgccctcgaccctgccttaaagcccgcaccgctgtcccaggctgacctcgccatcctgagccc
caagttgataccttcctcacccatgtcgtctgtgtccagctaccctccactcgccctgtccctgaagaag
ccccccaccgcccctgacaccagcgcctccaccctgcccaaccccccagccctcaaaaaggagtcccagg
atgcgcccgggctggacctcccgggagcggctgagtctgcacagggggtcctgcggcacgtgaagagcga
gctgggccgcagcggtgtgtggaaggaccactggtggagcaccgtccagccagagaggaagagcgccgca
ccccccgaggacgccaagtcagaagaagccggtggcaccaaggagaaagggggcggccaaggccacgggc
cgatcgcagccagctccagggaccctcatcatcgtcggagtactggaaggaatggcccagcgctgagtcc
gcgtactccccagagctctgagctgagcctgactggagccagccgcagcgagacaccccagaacagcccc
ctgccctcctccccgattgtgcccatgtccaagcccgccaagccctcggtccctccactgaccccggagc
agtatgagatctacatgtaccaggaggtggacaccattgagctcactcggcaggtgaaggagaagctggc
caagaacggcatctgtcaaagaatcttcggggagaaggtactgggcctgtcccagggcagcgtcagcgac
atgctgtcccggccaaagccttggagcaagctgacccagaaaggccgtgaacccttcatccggatgcagc
tctggctcaacggcgagctgggccagggtgtcctgcctgtccagggtcagcagcaagggccagttctcca
ttctgtgacgtcactacaggaccccctgcagcagggctgtgtgagctcagaaagcactccaaagacctct
gctagctgcagccctgcacctgaatcgccgatgagctctagtgaatccgtgaagagtttgactgaacttg
tccagcagccctgtccccccattgaaacgagtaaggatggcaagccaccagagcccagcgacccgcccgc
ctcagactcccagcctgccaccccgctgcctctttctggacactcggccctcagcatccaagagctggta
gccatgtctccagagctggacacctacggtataaccaagagagtcaaggaggtgctgacggacaacaatc
tcggtcagcgcttattcggggagaccattttaggcctcacccaaggctccgtctccgacctcctctcccg
tccaaagccctggcacaagctcagtctgaagggacgggagccttttgtccggatgcagctatggctgaat
gaccccaacaacgtggagaagctgatggacatgaaacgcatggagaagaaagcatacatgaagcggcggc
acagctcggtcagtgacagccagccctgcgagcccccctccgtgggcatcgactacagccagggcgccag
cccccagccccagcaccagctgaagaaaccccgagtggtgctggctcctgaagagaaagaagctctgaaa
cgagcttatcagcaaaagccatacccgtcaccaaaaaccatcgaagaactcgccacccagctcaacttga
aaaccagcaccgtcatcaactggttccacaattacaggtctcggatccgcagagaactgttcattgagga
gattcaggccgggagccagggccaggccggggccaggcactccccgtcggcccgaagcagcggcgcggcc
cccagctcggagggcgacagctgcgacggcgtggaggccgccgagggcccgggcgccgcggacgccgagg
agtcggcgcccgcggccgccgccaagtctcagggagggccagccgaggcggccgtggccccggaggagcg
ggaggaggcgccgaggccggcggagaagcgcagccgccgccctcggggccccggccccggccccggaaga
cgcggaggaggagggccggccccgggcgcccccgccgcccccgccgccgccgcccgagggcccagccgac
ggcccggggcccgtgccaaaccccgccgccgccgccgccgccgccgccgccacgcccgcgggggaggacg
ccgctacctcagccgccccgcccgcggagggccctgccgggcccgggacggcgcccacaggagttccgct
ttgccaagcaccagcgcgccggcggccgcccgcaggcccagctcgctgcagagcctcttcggcctcccgg
aggcggcgggcgccagggactctcgagacaaccccctgaggaagaagaaggccgcgaacttgaacagcat
aatccaccgcctggagaaggccgccagccgggaggagcccatcgaatgggagttctgagagggcgcccgc
cgcgccgggccgggccgggccgagccgcgccgcgccgcgccgggcgggccgagcgggctaagcgggccga
gccgggccgagtctgccgagccctgccgagtctgaccgagccgagccgggccgaacctggccgagcgggc
cgggccgggcagaggggcgggcgcggactccgcggcctggaccgtgttgcgcacttaccgccctgcgggc
cacagggcaaaatcgcgataggccaaggtgcatatagaaaacaaaggagcattaagcccaatctatgtcg
tgttttcaaggaagaaaacggaaatgtgtagtcgagcctttttgtaccctgaagtgttttttttattgcc
ctaagtgatttccacaggttctggaataactcttacagctttgccttgcgccctcctctttcgtgtgggc
tttaaaaaaaaaaaaaaaa
>MER58   Medium reiteration sequence MER58; DNA transposon.
caggggtcggcaaactttttctgtaaagggccagatagtaaatattttaggctttgcgggccatacggtc
tctgtcgcaactactcaactctgccgttgtagcgcaaaagcagccatagacaatatataaacgaatgggc
gtggctgtgttccaataaaactttatttacaaaaacaggcggtgggccagatttggcccatgggccatag
tttgccgacccctg
>MER2   Nonautonomous DNA transposon
cagtcgyccctccgtatccgtgygttccacatccgtggattcaaccaaccgcggatcgaaaatattcagg
yaaaaaattgyatggttgcgtctgtactgaacatgtacagacttttttncttgtcattattccctaaaca
atacagtataacaactatttacatagcatttacattgtattaggtattataagtaatctagagatgattt
aaagtatacgggaggatgtgcgtaggttatatgcaaatactacgccattttatatcagggacttgagcat
ccgcggattttggtatctgcggggggtcctggaaccaatcccccacggataccgagggatyactg
>HERVL   Internal part of endogenous retroviral element HERV-L.
[encoded data, 5750 characters]
>L1MA10   3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence
ttaatatccaaaatatataaagaactcytacaactcaacaaaaaaaaaacaaacaacccaattaaaaaat
gggcaaargacttgaatagacatttctccaaagaagayatayaaatggccaataagyacatgaaaaratg
ctcaacatcaytaatcattagggaaatgcaaatcaaaaccacaatgagataycacctyacacccattagg
atggctattatyaaaaaamcagaaaataacaagtgttgrygaggatgtggagaaattggaacccttrtrc
attgctggtgggaatgtaaaatggtrcarccactrtggaaaacagtatgghrgttcctcaaaaaattaaa
aatagaattaccatatgacccagcaatyccactyctrggtatatacccaaaagaattgaaatcatgttcy
yahaaagatayttgtacaccmatgttcatagcagcattattcayaatagccaaaaggtggaaacaaccca
aatgtccatcaatgrwtgaatggataaacaaaatgtggtatatacatacaatggaatattattcagcctt
aaaaaggaaggaaatyctgacayatgctacaacatggatgaaccttgargacattatgctaagtgaaata
agccagtcacaaaaggacaaatactgcatgattccacttatatgaggtatctaaaatagtcaaactcata
gaarcagagagtagaatggtggttgccaggggctgggggragggggaaatggggagttgctgttcaatgg
gtataaagtttcagttatgcaagatgaataagttctagagatctgctgtacaacattgtgcctatagtta
ataatactgtattgtacacttaaaawttgttaaaagrgtagatctcatgttaagtgttcttatcgcacaa
caaaaaaatggggaacttttggrrgtgatggatatgttcattatcttgattgtggtgatggtwtcacggg
tgtntacatatgtcaaaactcatcaaattgtacacwttaaatatatgcagtttttagtgtataattatac
ctcaacaaagctgtttt
>L1MB3   3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence
ttaatatccaaaatatataaagaactcytacaactcaacaaaaaaaaaacaaacaacccaattaaaaaat
gggcaaargacttgaatagacatttctccaaagaagayatayaaatggccaataagyacatgaaaaratg
ctcaacatcaytaatcattagggaaatgcaaatcaaaaccacaatgagataycacctyacacccattagg
atggctattatyaaaaaamcagaaaataacaagtgttgrygaggatgtggagaaattggaacccttrtrc
attgctggtgggaatgtaaaatggtrcarccactrtggaaaacagtatgghrgttcctcaaaaaattaaa
aatagaattaccatatgacccagcaatyccactyctrggtatatacccaaaagaattgaaatcatgttcy
yahaaagatayttgtacaccmatgttcatagcagcattattcayaatagccaaaaggtggaaacaaccca
aatgtccatcaatgrwtgaatggataaacaaaatgtggtatatacatacaatggaatattattcagcctt
aaaaaggaaggaaatyctgacayatgctacaacatggatgaaccttgargacattatgctaagtgaaata
agccagtcacaaaaggacaaatactgtatgattccacttatatgaggtacctagagtagtcaaattcata
gagacagaaagtagaatggtggttgccaggggctggggggaggggggaatggggagttaktgtttaatgg
gtacagagtttcagtttgggaagatgaaaaagttctggagatggatggtggtgatggttgcacaacaatg
tgaatgtacttaacgccactgaactgtacacttaaaaatggttaaaatggtaaattttatgttatgtata
ttttaccacaattaaaa
>L1MB7   3'-end of L1 repeat (subfamily L1MB7) - a consensus sequence
yttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagayttgaatagatatttctccaaagaagatatayaaatggccaataagcacatgaaaagatr
ctcaacatcattagtcatcagggaaatgcaaatyaaaaccacaatgagataycacttcacacccaytaga
atggctaaaattaaaaagacagrmaatamcaartgttggyraggatgtrgagaaaytggaachctcatac
aytgctggtgggaatgtaaaatggtacarcyactttggaaaacagtttggcagttcctcaaaaagttaam
aatagagttaccatatgacccagcaattycactcctaggtatwtacccaagagaaatgaaaacatayrtc
cayacaaaaacttgtacacaaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaatratwgaatggataaacaaaatgtggtatatccatacaatggaatattattcagcmat
aaaaaggaatgaagtamtgatmyatgcaacaacatggatgaaccttgaaaacattatgctaagtgaaaga
agccarrcacaaaagrccacatattgtatgattccatttatatgaaatgtccagaataggcaaatccata
gagacagaaagtagattagtggttgccaggggctgggggraaggggaaatggggagtgactgctaatggg
tacggggtttctttttggggtgatgaaaatgttctaaaattagatagtggtgatggttgcacaactytgt
gaatatactaaaaaccactgaattgtacactttaaaagggtgaattttatggtatgtgaattatatctca
ataaarctat
>L1MC2   3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence
yttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagayttgaatagatatttctccaaagaagatatayaaatggccaataagcacatgaaaagatr
ctcaacatcattagtcatcagggaaatgcaaatyaaaaccacaatgagataycacttcacacccaytaga
atggctaaaattaaaaagacagrmaatamcaartgttggyraggatgtrgagaaaytggaachctcatac
aytgctggtgggaatgtaaaatggtacarcyactttggaaaacagtttggcagttcctcaaaaagttaam
aatagagttaccatatgacccagcaattycactcctaggtatwtacccaagagaaatgaaaacatayrtc
cayacaaaaacttgtacacaaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaatratwgaatggataaacaaaatgtggtatatccatacaatggaatattattcagcmat
aaaaaggaatgaagtamtgatmyatgcaacaacatggatgaaccttgaaaacattatgctaagtgaaaga
agccarrcacaaaagrccacatattgtatgattccaactatatgacattctgaaaaaggnaaaactatgg
agacaagtaaaaagatcagwgattnctagagkgastrggarrgggagggaagaataggtggagcncaggg
gatttttagggcagcgaaactattctgtatgatactataatggtggatacatgacattatacatttgtca
aaayccatagaactgtacaayacaaagagtgaaccctaatgtatggactttagttaataataatgtatca
atgttggttcatcaattgtaacaaatgtaccacattaatgcaagatgttaataatagggtaaactrttgt
gtgggggagggagtatatgggaactctctgtactttctgctcaatttttctgtaaacctaaaactgyttc
aaaaaataaagtctattaataa
>L1MD1   3'-end of L1 repeat (subfamily L1MD1) - a consensus sequence
yttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagayttgaatagatatttctccaaagaagatatayaaatggccaataagcacatgaaaagatr
ctcaacatcattagtcatcagggaaatgcaaatyaaaaccacaatgagataycacttcacacccaytaga
atggctaaaattaaaaagacagrmaatamcaartgttggyraggatgtrgagaaaytggaachctcatac
aytgctggtgggaatgtaaaatggtacarcyactttggaaaacagtttggcagttcctcaaaaagttaam
aatagagttaccatatgacccagcaattycactcctaggtatwtacccaagagaaatgaaaacatayrtc
cayacaaaaacttgtacacaaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaatratwgaatggataaacaaaatgtggtatatccatacaatggaatattattcagcmat
aaaaaggaatgaagtamtgatmyatgcaacaacatggatgaaccttgaaaacattatgctaagtgaaaga
agccarrcacaaaagrccacatattgtatgattccatttacataacattcttaaaatgacaaaattwtag
arwtgragarcagattcctggttgccaggggttagggacgggggtgggggtggagggaggtgggcatsst
ggagttccctgtggtgatggaaatgttctgtatcttcactgtcactgtatcaatgtcaatatcctggttg
tgataytgtaytatagttttgtaagatgttaccattgggggaagctgggtgaagggtacacgggatctct
ctgtaytatttcttacaattgtctgtgagtktayaattatttcaaaataaagtttaatttaaa
>L1MD2   3'-end of L1 repeat (subfamily L1MD2) - a consensus sequence
yttgtatccagaatatataaagaactcttacaactcaacaataaaaaaacaaacaacctaattaaaaaat
gggcaaaagayttgaatagatatttctccaaagaagatatayaaatggccaataagcacatgaaaagatr
ctcaacatcattagtcatcagggaaatgcaaatyaaaaccacaatgagataycacttcacacccaytaga
atggctaaaattaaaaagacagrmaatamcaartgttggyraggatgtrgagaaaytggaachctcatac
aytgctggtgggaatgtaaaatggtacarcyactttggaaaacagtttggcagttcctcaaaaagttaam
aatagagttaccatatgacccagcaattycactcctaggtatwtacccaagagaaatgaaaacatayrtc
cayacaaaaacttgtacacaaatgttcatagcagcattattcataatagccaaaaagtggaaacaaccca
aatgtccatcaatratwgaatggataaacaaaatgtggtatatccatacaatggaatattattcagcmat
aaaaaggaatgaagtamtgatmyatgcaacaacatggatgaaccttgaaaacattatgctaagtgaaaga
agccarrcacaaaagrccacatattgtatgattccatttatataacattcttaaaacgacaaaactatag
agatggagaacagattagtgrttgccaggkgttagggatrcaggraggaggtggatgtgrytataaarrg
gtagcatgagrgaatytttatggtgatggaacwgttctgtatcttgaytgtggtgrtggttacacgaatn
tatacatgtgataaaattgcatagaactaaatacacacacacacataagtacaagtaaaactggcgaaat
ctgaataagattratggattgtaycaatgtcaatttcctggttktgatattgtaytatagttttccaaga
tgttaccattgggggaagctgggtgaagggtacacgggatctctctgtaytatttcttacaattgtctgt
gagtktayaattatttcaaaataaagtttaatttaaa
>TIGGER2   Autonomous DNA transposon
cagttgacccttgaacaacacgggtttgaactgcgcgggtccacttatacgtgrattttttycaataaat
atattggaaaaawttytggagatttgcaacaatttgaaaaaactcgcagacgaaccgcgtagcctagaaa
tattgaaaaaattaagaaaaaggtatgtcatgaatgtataaaatatatgtagatactagtctattttatc
atttactaccataaaatayacacaaanctattataaaaagttaaaatttatcaaaacttayayayayact
tacagactgtacgtggtaccattcgaagtngagagaaatataaacaaacntaaagatgcagtattaaatc
acaactgcgtaaaattaactgtagtacatactatactaccgtaataattttgtagccacctcctgttgct
attgcagcgagctcaagtgttgtgagtacctgcttaaaacgctskgtgatgctaatcatctccgcgcgag
cagttyatctctccagtaaattgcgtattgcagtaaaaagtgatctctcacggttctcgcgtatttttca
ttgtgtttartgcaatattgtaaaccttgaataacaccatgggacccatacgaagtgccactagtgatgc
tggaagtgctcccaagaagcagagaaaagtcatgacattacaagaaaaagttgaattgcttgatatgtac
catagattgaggtctgcagctggggttgcctgccatttcaagayagatgaatccggcgtaaggaccgttg
tmaaaaaagaaaaggaaattcgtgaaraccgtcgctgcagttatgcccagcaggcacaaaaacttgtnac
tttttgcgaaatacctttttatgttgtattgaaaatgcagcttttntgtgggtgcaggattgctataaga
aaggmatacctanagactctaatatgattagagaaaaagcgaagtcattatgtgannacttaaagcaaaa
rraagatgamrgatctaaagctgganaatttaatgccagcaaakgatggtttgacaattttagaaagarg
twtggcttaaaaaatktcaagakaacaggagaagcasyttctgctgaccaagagacagcagacgagttnc
cagatgccattaacaaaatcattgaggagaaaggatatctgcctgaacaggtttttaatgcagatgarag
tgccctattctggggggaaaaaatgccacaaagracatttattagtaagnaagagaagcgagcaccagga
tttaaggcargaagggataggctaactctactgttttgtgcaaatgcagttaggtttatgatcaggactg
cccttatctataaagctgctaacccccgagccttgaagggaaaagataaacgccagctgccagtcttttg
gttgtacaacaagaaggcctggacaacgagaaccctttttctggattggttccattkatgctttgtccct
gawgtcaggaagtaccttgccagtaagrgactgccttttaaagttcttttgatattggacaatgcccytg
gccacccagaaccccatgagttcaacaccgaaggtgtcgaagtggtctacttgcccccaaacacaacgtc
tctaattcagcctctagatcagggggtcataaggacctttaaggctcattacacacggtactctatggaa
aggattgtcaacgctatggaagagaaccccgatagaragaacatcatgaaagtctggaaggattacacca
ttgaagatgccattgttrttatagaaaaagccgtgaaagccatcaagcccaaaacagtaaattcctgctg
gagaaaactgtgtccagatgttgtacatgacttcacaggatttacgacagagccaatcaaggaaatcatg
aaagagattgtggatatggcaaaaaagttggggggtaaagggtttcaagatgcgaatcttggagaaattc
aagagcwaatagacaccacaccagaggaattaacagaagacgacttgatggagatgagtgcttccgaacc
agtgccagacgatgaggaagaagacatngaagaagcagtgccagaaaacaaattgacattagacaatctr
ggcagaagggttccaattattcaagactgcttttgacttcttttacaacatggacccttctatgatacgg
gcactgaaactaaagcaaacagtggaagaaggattggtaytatacagaaacatttttagagaaatgaaaa
ggcaaaaayrtcagacagaaattacgatgtatttccgtaaagttacaccgagtgtgcctgcctctcctgc
ctccccttccacctcctccacctcttccacctctgccaccctgagacagcaagaccaacccctcctcctc
ctcagcctwctcaatgtgaagacgacgaggatgaagacctttatgatgatccacttccacttaatgaata
gtaaatatattttctcttccttatgattttcttaataacattttcttttctctagcttactttattgtaa
gaatacggtatataatacatataacatacaaaatatgtgttaatcgactgtttatgttatcggtaaggct
tccagtcaacagtaggctattagtagttaagttttkggggagtcaaaagttatacgtggatttttnactg
cgcggggggtcagcgcccctaacccccgcgttgttcaagggtcaactg
