ID   Gypsy-34-I_NV repbase;    DNA;    NEM; 4465 BP.
XX
AC   .
XX
DT   06-JUL-2007 (Rel. 12.07, Created)
DT   06-JUL-2007 (Rel. 12.07, Last updated, Version 1)
XX
DE   Internal portion of the Starlet sea anemone Gypsy-34_NV
DE   autonomous LTR Retrotransposon - consensus.
XX
KW   Gypsy; LTR Retrotransposon; Transposable Element; Gypsy-34-I_NV;
KW   Gypsy-34-LTR_NV; Gypsy-34_NV.
XX
OS   Nematostella vectensis
OC   Eukaryota; Metazoa; Cnidaria; Anthozoa; Zoantharia; Actiniaria;
OC   Edwardsiidae; Nematostella.
XX
RN   [1]
RP   1-4465
RA   Putnam N.H., Srivastava M., Hellsten U., Dirks B., Chapman J.,
RA   Salamov A., Terry A., Shapiro H., Lindquist E., Kapitonov V.V.,
RA   Jurka J., Genikhovich G., Grigoriev I.V., Lucas S.M., Steele R.E.,
RA   Finnerty J.R., Technau U., Martindale M.Q., Rokhsar D.S.;
RT   "Sea anemone genome reveals ancestral eumetazoan gene repertoire
RT   and genomic organization.";
RL   Science 317(5834), 86-94 (2007).
XX
RN   [2]
RP   1-4465
RA   Kapitonov V., Jurka J.;
RT   "Gypsy-34_NV - a family of autonomous LTR Retrotransposons from
RT   the starlet sea anemone genome.";
RL   Repbase Reports 7(7), 499-499 (2007).
XX
CC   [2] (Consensus)
XX
SQ   Sequence 4465 BP; 1432 A; 1095 C; 993 G; 944 T; 1 other;
     tggtgtaaga agcgggattt tgcacaccaa aaaggcctcc cagcaagcca agagggcaag        60
     aatactgaga taagtgttca attcatatgc aacgggcatt tatttgcatc tgtatagtga       120
     ttttggcaat catttcggca catttgccga ctacatatag ccgccatctt ggattttaca       180
     gatcgcattg gatcttctca acatggcaaa gtcgcttcca acgccccaac ccctcgaaat       240
     gcagggagat atggccacca actgggaaat attcaaagac agctgggaaa actatattat       300
     cgcgacggaa ttaaacaaga aatcggatgc aatcgtggta gcgactctct tgacagtcat       360
     gggcaaagat tgctacagaa tttacaagaa tttgcccctc accgatgatg aacgaaagtc       420
     ccccacatct attctggaga aattaggtga ggaattccag tccaagagga acattatata       480
     tgagaggtac ttgtactttt gcaccgtcca agagcccagt gaaagctttg accgtttctt       540
     gaacagactc agagatcgca ttgccacatg caagtacact actcttgaga atgaaatgtt       600
     aagggaccgg attgtatttg gggttaacaa cagtgacacc cgagaacgcc ttctaagaga       660
     aaaagaacta gacctggaca aagcaataaa catttgtcgc acaagtgaaa tggcagttag       720
     acagcttcac aaaatggagc caactgagac cgtccactat acgaagcaaa acaagtccaa       780
     atcaaagccg aggcagatca cagaatgcaa gtactgtggt gacagccatg ccgctggaaa       840
     atgcaaagca tttgggcagg tctgcagtaa atgcagcaag aagaatcact tcgctagagt       900
     ttgcatgtcc actcgtcaag atcataaggc gagccagcct caacagaagc cagacaagca       960
     ggctagaaga ggtaaacaag acgtacacca actagaagag agctcatgca gtgacgatga      1020
     tgatgaattc tccagcaatg acagcctgta taccattcag tcaaaccaga agaaaaggca      1080
     gtattttgca caagtgttag ctgtgacagg agatgagacg gccaggcagt caatcaaatt      1140
     tcagcttgat accggagcaa catgcagcac actatccctt aacgactaca ataagctgac      1200
     caagaagcaa cccgagcagt cccaaactga gctgcgagcc tacaatcagt caaccatcaa      1260
     acccatgggg caagtcaagc ttcactgcac agcaaatggg atcacaagaa aggttcactt      1320
     ccagataatc aaagaggcac caacgtcatt actctcaggc agagtctgcg aagcacttaa      1380
     gcttcttgaa ttcaatgaag aatgtgtcca ccaaatcgag ccaggtccaa aagaacccct      1440
     gacaaaacag catgtcttac atgactacaa ggatgtcttc agtggacttg gaaggctgcc      1500
     gggtacatac cacatagaaa cagatccaac tgtgaaaccc aagcagaaca atcccaggcg      1560
     tgtccctatc ccagtacagg atgagttgaa gaagaagatt gaggatcttg aggaaatggg      1620
     agtaatcgct aaagtaacta ccccaacgcc atggataagc agcatggtgg tagtccgaca      1680
     accaaacaag ctacgagtat gcctagaccc atcggagttg aacaaggcca taatcagaaa      1740
     ccattatcca actccaacta ttgacgaagt gtcacccaaa ctgaccaatg ccaaggtatt      1800
     ctcagtagtc gatgcaaaag atggatttct gcaagttgtc ttggacgagc catcaagcta      1860
     cctcacaaca ttctggacac cttatggccg ttacaggtgg ttgcgaatgc cattcgggat      1920
     caagtccgcc ccagaagagt tccagcgcag aatcaatgaa tgtattgaag gccttccaaa      1980
     catcgcagca gtccatgatg acatcatcat ctatggaacg ggtgaaacag aagaagaagc      2040
     aatggcatgt catgatgcag ctctcaaaga cctactggat agatgcagag aacacaacct      2100
     gaagctcaac ccaaagaagc tcaaattcaa gttggacagg gtgacctact taggacatgt      2160
     cctcagcgca gacggaatct ctgctgatcc agaaaaagtg aaagccatct gtgagatgcc      2220
     gcagcctgtt gatattgcag gcgtccagcg cctcattggt gttgtcactt acttgtccaa      2280
     attccttcct cagctaagca cggttgcaga acctctccga cgtctgactg acaaggacgc      2340
     agtgtttgac tggctgccac agcatcagga agcctttgag aagatcaaga tgatgatcac      2400
     caaagcaccg gtattacact attatgatgt caacaaagag gtaaccattg aaagtgacag      2460
     ctccaacgta ggcttggggg cagtcattac acaagaggga caccccattg cctatgcctc      2520
     tagagctctc actcagactg agcgcaacta tgctcaaata gagaaagagt gcttagcaat      2580
     catgtatgca actgaacgtt ttgaacacta cattctaggc aaagagaatg tcagagtcct      2640
     tacagatcac aagcccctcg tcacgatctt caagaagccc atccttacct gccccaagcg      2700
     tctgcagcga atgcgactgc gtctacagaa attctcgctt gctgtagagt acaagcctgg      2760
     gcccacgatg tatctcagtg ataccctatc ccgcgcatca ctaccgctcg accatgcacg      2820
     tccagacaca ccagcctatc agatattcca gataagtgaa gaagagaaga tacgagaaga      2880
     aatagaagat atcgacatgc aggagtccct gtttgtgact gacgaacgac ttgacaacat      2940
     cagacgagag acagccaaag acccctcact ccaaaccttg atgacagtca ccaagcaagg      3000
     ttggccagac aacaaagctg aagttcccac ttgtattcgt gaatactggc catacagaga      3060
     tgaactatca actcagaacg gacttgcctt caggggaacc aggatcgtca ttcctacaac      3120
     aatgagaacc gagatgacaa cacgagcaca tgcgtcacac ctaggtatcc agtacactac      3180
     aaatacagct agagacatca tgtattggcc aggcatgtca gctgacctta cagaagcagt      3240
     acagcgatgc tccacctgtc aagaaatgca accagcacag cagaaagagc caatgatgac      3300
     acatcccata cctcagctac catggcaagc agttgccagt gattgcctgg aagtgcaagg      3360
     cgaacactac ttggtcctag tagatctgta ctctgactac atagaactag ttcagcttcc      3420
     agacatgtca tctaaaactc tcatccagca gatgaaaccg atatttgcaa cccacgggac      3480
     accagcagtt cttatatcag acaatggaac caactacagt tcacaggaat tccaagagtt      3540
     caccaaggca tgggaaatat atcacgtaac tgtaagtcct catcaccaca agtctaacgg      3600
     gaaggtggag tcggcagtga agattatgaa gagaatcatc atcaaggcca agaaagacgg      3660
     ctcagacctg tggaagtcac tattggaatg gagaaactca ccaactccag gaacatccag      3720
     ctcaccagca caacgactta tgtcccgccg aaccaggtct atgttgcctt gcagccaggc      3780
     cctgtacaag cccgaagtac aggcagcggt gacagaacag atcatccaaa agcgcaagca      3840
     ggccaaacac tatcatgatc gcacagcgaa gtcactgcct agtcttgttg ttggtcaacc      3900
     artaagggtg aaggtacatc cacaacaggc tcatagcaat tggaaggcag ggacagtggt      3960
     ttccatggca acaacgccac gcagttacgt tgtacaagtc aatggcagga cgtatcgcag      4020
     aaatcgggta catttgcgag acgctcaacc tgacctatca gctgcacaag accattctgc      4080
     tccagagcca agccatgatg caacaaagtc ttcaggaatg tctacctgca gtccagcacc      4140
     agaaccaagt ggtccaggtc cattagtcgc cacgacaact gtacttacag aaccagtagt      4200
     cacacgatca ggacgagttg tgaagcctcc acaaaggctg atcaatgctc agtcatagtt      4260
     tactacgtag tgacttttaa atgccagtca taaactttgt tatttgaaac tgacttatag      4320
     ttatagttgc tgtttagtct acaattgtgt ttaatgtttg ttgtccctag aaagggagat      4380
     gttatggtat acctgttgaa tttgctagtt accaggccat gcgcagcagg gcttagcttg      4440
     tagtcaactg aacacgaata aaaca                                            4465
//
