ID   ORSL        repbase; DNA   ; PRI   ; 630 BP.
XX
AC   M26221;
XX
DT   30-APR-1998 (Rel. 6.5, Created)
DT   30-APR-1998 (Rel. 6.5, Last updated, Version 1)
XX
DE   Origin of replication-like (ORS8) region (a consensus).
XX
KW   Origin of replication; ORSL.
XX
OS   Primates
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria.
XX
RN   [1]
RP   287-482
RA   Rao S.B., Zannis-Hadjopoulos M., Price B.G., Reitman M.,
RA   Martin G.R.;
RT   "ORSL..";
RL   Unpublished (1989).
XX
RN   [2]
RP   1-630
RA   Rao S.B., Zannis-Hadjopoulos M., Price B.G., Reitman M.,
RA   Martin G.R.;
RT   "Sequence similarities among monkey DNA-replication ori-enriched
RT   (ors) fragments..";
RL   Gene 87, 233-242 (1990).
XX
RN   [3]
RP   1-630
RA   Jurka J.;
RT   "ORSL..";
RL   Direct Submission to Repbase Update (13-APR-1998).
XX
CC   [3] (Consensus)
XX
CC   This sequence is moderately repeated in human DNA.
CC   It shares ~200bp stretch of similarity with African
CC   Green Monkey origin of replication region (Acc. No. M26221).
XX
SQ   Sequence 630 BP; 183 A; 118 C; 135 G; 175 T; 19 other;
     ycccatacyg tttccrtcac trgtytgwgc accctctgca rggmagacag catgaytttt        60
     yatctttgaa tycyyaaaas ttagctcact gtgtgctcaa acgtgtattg aatgacagtt       120
     gctatatttg aggacbacat agattttggg gaagacggac aggcacacta gcagaaccat       180
     acgaaggcca ggatcagtca tgaccagggc tgcattatga cttgtgggcc ctgagcactt       240
     ttgcttttat gggccccttc ctccataaaa atattaaaaa ttatatttta tgactgcatt       300
     ggtataaaga tgagaatata atccaggctg aattaaaaca ttttcttaga ctctaaaatt       360
     tcattttttt ctgattttaa aagaaattaa aacattttya tggggcccta aagtattgtg       420
     ggccctaggc actgtgccta ctgtgcctaa tggataagtc nagcctgacc agggcactct       480
     ggtgtgaggt tgaagaaagg aaatttggaa caaagaagcc aagtgctctg gagaagcagg       540
     tgaaacttcc actgccgaac aaaatcagaa tgggagcagc catggttaat aaggttgtgg       600
     aagtttagas cttccagttc acttcmcctt                                        630
//
ID   MSTA        repbase; DNA   ; PRI   ; 426 BP.
XX
AC   .
XX
DT   01-OCT-1995 (Rel. 3.6, Created)
DT   18-APR-1997 (Rel. 6, Last updated, Version 2)
XX
DE   Transposon-like human element long terminal repeat (MSTa
DE   subfamily) - a consensus.
XX
KW   Repetitive sequence; MaLR family; MSTa subfamily; MstII; MER10;
KW   MSTA.
XX
OS   Primates
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria.
XX
RN   [1]
RP   1-426
RA   Jaiswal K.A., Gonzalez J.F., Nebert W.D.;
RT   "Human P1-450 sequence and correlation of mRNA with genetic
RT   differences in benzo[a]pyrene metabolism..";
RL   Nucleic Acids Res 13, 4503-4520 (1985).
XX
RN   [2]
RP   1-426
RA   Lawrance K.S., Das K.H., Pan J., Weissman M.S.;
RT   "The genomic organization and nucleotide sequence of the
RT   HLA-SB(DP) alpha gene..";
RL   Nucleic Acids Res 13, 7515-7528 (1985).
XX
RN   [3]
RP   1-426
RA   Mermer B., Colb M., Krontiris G.T.;
RT   "A family of short interspersed repeats is associated with
RT   tandemely Repetitive DNA in the human genome..";
RL   Proc. Natl. Acad. Sci. U.S.A 84, 3320-3324 (1987).
XX
RN   [4]
RP   1-426
RA   Kaplan J.D., Jurka J., Solus F.J., Duncan H.C.;
RT   "Medium reiteration frequency repetitive sequences in the human
RT   genome..";
RL   Nucleic Acids Res 17, 4731-4738 (1991).
XX
RN   [5]
RP   1-426
RA   Smit F.A.;
RT   "Identification of a new, abundant superfamily of mammalian
RT   LTR-transposons..";
RL   Nucleic Acids Res 21(8), 1863-1872 (1993).
XX
CC   [5] (Consensus)
XX
CC   Replaces MER10 sequence.
XX
SQ   Sequence 426 BP; 85 A; 111 C; 101 G; 124 T; 5 other;
     tgatatggtt tggatctgtg tccccaccca aatctcatgt tgaattgtaa tccccaatgt        60
     tggaggtggg gcctggtggg aggtgattgg atcatggggg cggattyctc atgaatggtt       120
     tagcaccatc cccttggtgc tgtyctcgtg atagtgagtg agttctcatg agatctggtc       180
     gtttaaaagt gtgtggcacc tcccycctct ctctcttgct cctgctctcg ccatgtgacg       240
     tgcctgctcc cccttcgcct tccgccatga ttgnaagctt cctgaggcyt ccccagaagc       300
     cgagcagatg ccagcgccat gcttcctgta cagcctgcag aaccgtgagc caattaaacc       360
     tcttttcttt ataaattacc cagtctcagg tatttcttta tagcaatgtg agaacagact       420
     aataca                                                                  426
//
ID   MSTAR       repbase; DNA   ; PRI   ; 1651 BP.
XX
AC   .
XX
DT   01-MAY-1996 (Rel. 5.2, Created)
DT   23-JAN-1998 (Rel. 6.4, Last updated, Version 3)
XX
DE   MSTa-Mammalian LTR internal retrotransposon sequence - a
DE   consensus.
XX
KW   Non-LTR retrotransposon; MaLR family; MSTa subfamily; MstII;
KW   MER10; MSTAR.
XX
OS   Primates
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria.
XX
RN   [1]
RP   1-1651
RA   Smit F.A.;
RT   "Structure and evolution of mammalian interspersed repeats..";
RL   PhD dissertation, Univ Southern California, 1995.
XX
CC   [1] (Consensus)
XX
CC   ORF: bases 48 to 1469.
XX
SQ   Sequence 1651 BP; 436 A; 353 C; 489 G; 371 T; 2 other;
     gaawattggt actgaggagt ggagcattgc tataaagata cctgaaaatg tggaagcgac        60
     tttggaactg ggtaacaggc agaggttgga agagtttgga gggctcagaa gaagacagga       120
     agatgaggga aagtttggaa cttcttagag acttgttaaa tggttgtgac caaaatgctg       180
     atagtgatat ggacagtaag ggccaggctg acgaggtctc agatggaaat gaggaactta       240
     ttgggaactg gagcaaaggt cactcttgtt atacattagc aaagagcttg gctgcatttt       300
     gcccctgccc tagagatttg tggaagtttg aacttgagag tgatgatcta gggtatctgg       360
     cggaagaaat ttctaagcag caaagcgttc aagatgtgac ctggctgctt ttaacagctt       420
     acagtcatat gcgagagcaa agaaatcact taaagttgga atttatattt aaaagggaag       480
     cagagcgtaa aagtttggaa aatttgcagc ctggccatgt gatagaaaag aaaaacccgt       540
     tttctggaga gaaattcaag caggctgcgg agcgaccgtt tgctaaagag attagcataa       600
     ctaaaaggaa gccaagtgct gatagccaag acaatgggaa aaaggcctcg aaggcatttc       660
     agaaatcttc gaggtggtcc ttcccatcac aggcccagag gcctaggagg actgaatggt       720
     ttcgtgggcc aggcccaggg ccccgctgcc ctgtgcagcc tcgggacact gctccctgca       780
     tcccggctgc tycggctcca gccgtggctc aaagggcccc aggtacagct cgagctgccg       840
     cttcggagag tgcaagctat aagccttggt ggcttccaca tggtgttaag cctgcaggtg       900
     cacagaatgc aagagtgaag gaggcttggc agcctccacc tagatttcag aggatgtatg       960
     ggaaatcctg ggtgcccagg cagaagcctg ctgcagggac ggagccctca cagagaacct      1020
     ctactagagc agtgccaaag ggaaatgtgg ggttggagcc cccacacaga gtccccaccg      1080
     gggcactgcc tagtggagct gtgggaaggg ggccactgtc ctccagaccc cagaatggta      1140
     gagccactgg cagcgtgcac cgccagcctg gaaaagccgc aggcatcaga ctccaacccg      1200
     tgagagcagc cacgtgggct gtgcccagca aagccacagg ggcggagctg cccaaggcct      1260
     tgggagccca cccctcgcac cagcgtgccc tggatgcgag acacggagtc aaaggagatt      1320
     attttggagc tttaagattt aatgactgcc ctgctgggtt tcggacttgc gtggggcctg      1380
     tagccccttt cttttggccc atttctccct tttggaatgg aaatatttac ccaatgcctg      1440
     taccaccatt gtatcttgga agtaaataac ttctttttga ttttacaggc tcataggtgg      1500
     aaggaacttg ccttgtctca gatgagactt tggactttgg acttttgagt taatgctgga      1560
     atgagttaag actttggggg actgttggga aggcatgatt gtattttgca atgtgagaag      1620
     gacgtgagat ttgggggaac caggggcaga a                                     1651
//
ID   MSTAR       repbase; DNA   ; PRI   ; 1651 BP.
XX
AC   .
XX
DT   01-MAY-1996 (Rel. 5.2, Created)
DT   18-APR-1997 (Rel. 6, Last updated, Version 2)
XX
DE   MSTa-Mammalian LTR internal retrotransposon sequence - a
DE   consensus.
XX
KW   Repetitive sequence; MaLR family; MSTa subfamily; MstII; MER10;
KW   MSTAR.
XX
OS   Primates
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria.
XX
RN   [1]
RP   1-1651
RA   Smit F.A.;
RT   "Structure and evolution of mammalian interspersed repeats..";
RL   PhD dissertation, Univ Southern California, 1995.
XX
CC   [1] (Consensus)
XX
CC   ORF: bases 48 to 1469.
XX
SQ   Sequence 1651 BP; 436 A; 353 C; 489 G; 371 T; 2 other;
     gaawattggt actgaggagt ggagcattgc tataaagata cctgaaaatg tggaagcgac        60
     tttggaactg ggtaacaggc agaggttgga agagtttgga gggctcagaa gaagacagga       120
     agatgaggga aagtttggaa cttcttagag acttgttaaa tggttgtgac caaaatgctg       180
     atagtgatat ggacagtaag ggccaggctg acgaggtctc agatggaaat gaggaactta       240
     ttgggaactg gagcaaaggt cactcttgtt atacattagc aaagagcttg gctgcatttt       300
     gcccctgccc tagagatttg tggaagtttg aacttgagag tgatgatcta gggtatctgg       360
     cggaagaaat ttctaagcag caaagcgttc aagatgtgac ctggctgctt ttaacagctt       420
     acagtcatat gcgagagcaa agaaatcact taaagttgga atttatattt aaaagggaag       480
     cagagcgtaa aagtttggaa aatttgcagc ctggccatgt gatagaaaag aaaaacccgt       540
     tttctggaga gaaattcaag caggctgcgg agcgaccgtt tgctaaagag attagcataa       600
     ctaaaaggaa gccaagtgct gatagccaag acaatgggaa aaaggcctcg aaggcatttc       660
     agaaatcttc gaggtggtcc ttcccatcac aggcccagag gcctaggagg actgaatggt       720
     ttcgtgggcc aggcccaggg ccccgctgcc ctgtgcagcc tcgggacact gctccctgca       780
     tcccggctgc tycggctcca gccgtggctc aaagggcccc aggtacagct cgagctgccg       840
     cttcggagag tgcaagctat aagccttggt ggcttccaca tggtgttaag cctgcaggtg       900
     cacagaatgc aagagtgaag gaggcttggc agcctccacc tagatttcag aggatgtatg       960
     ggaaatcctg ggtgcccagg cagaagcctg ctgcagggac ggagccctca cagagaacct      1020
     ctactagagc agtgccaaag ggaaatgtgg ggttggagcc cccacacaga gtccccaccg      1080
     gggcactgcc tagtggagct gtgggaaggg ggccactgtc ctccagaccc cagaatggta      1140
     gagccactgg cagcgtgcac cgccagcctg gaaaagccgc aggcatcaga ctccaacccg      1200
     tgagagcagc cacgtgggct gtgcccagca aagccacagg ggcggagctg cccaaggcct      1260
     tgggagccca cccctcgcac cagcgtgccc tggatgcgag acacggagtc aaaggagatt      1320
     attttggagc tttaagattt aatgactgcc ctgctgggtt tcggacttgc gtggggcctg      1380
     tagccccttt cttttggccc atttctccct tttggaatgg aaatatttac ccaatgcctg      1440
     taccaccatt gtatcttgga agtaaataac ttctttttga ttttacaggc tcataggtgg      1500
     aaggaacttg ccttgtctca gatgagactt tggactttgg acttttgagt taatgctgga      1560
     atgagttaag actttggggg actgttggga aggcatgatt gtattttgca atgtgagaag      1620
     gacgtgagat ttgggggaac caggggcaga a                                     1651
//
ID   MSTA        repbase; DNA   ; PRI   ; 426 BP.
XX
AC   .
XX
DT   01-OCT-1995 (Rel. 3.6, Created)
DT   23-JAN-1998 (Rel. 6.4, Last updated, Version 3)
XX
DE   Transposon-like human element long terminal repeat (MSTa
DE   subfamily) - a consensus.
XX
KW   Non-LTR retrotransposon; MaLR family; MSTa subfamily; MstII;
KW   MER10; MSTA.
XX
OS   Primates
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria.
XX
RN   [1]
RP   1-426
RA   Jaiswal K.A., Gonzalez J.F., Nebert W.D.;
RT   "Human P1-450 sequence and correlation of mRNA with genetic
RT   differences in benzo[a]pyrene metabolism..";
RL   Nucleic Acids Res 13, 4503-4520 (1985).
XX
RN   [2]
RP   1-426
RA   Lawrance K.S., Das K.H., Pan J., Weissman M.S.;
RT   "The genomic organization and nucleotide sequence of the
RT   HLA-SB(DP) alpha gene..";
RL   Nucleic Acids Res 13, 7515-7528 (1985).
XX
RN   [3]
RP   1-426
RA   Mermer B., Colb M., Krontiris G.T.;
RT   "A family of short interspersed repeats is associated with
RT   tandemely Repetitive DNA in the human genome..";
RL   Proc. Natl. Acad. Sci. U.S.A 84, 3320-3324 (1987).
XX
RN   [4]
RP   1-426
RA   Kaplan J.D., Jurka J., Solus F.J., Duncan H.C.;
RT   "Medium reiteration frequency repetitive sequences in the human
RT   genome..";
RL   Nucleic Acids Res 17, 4731-4738 (1991).
XX
RN   [5]
RP   1-426
RA   Smit F.A.;
RT   "Identification of a new, abundant superfamily of mammalian
RT   LTR-transposons..";
RL   Nucleic Acids Res 21(8), 1863-1872 (1993).
XX
CC   [5] (Consensus)
XX
CC   Replaces MER10 sequence.
XX
SQ   Sequence 426 BP; 85 A; 111 C; 101 G; 124 T; 5 other;
     tgatatggtt tggatctgtg tccccaccca aatctcatgt tgaattgtaa tccccaatgt        60
     tggaggtggg gcctggtggg aggtgattgg atcatggggg cggattyctc atgaatggtt       120
     tagcaccatc cccttggtgc tgtyctcgtg atagtgagtg agttctcatg agatctggtc       180
     gtttaaaagt gtgtggcacc tcccycctct ctctcttgct cctgctctcg ccatgtgacg       240
     tgcctgctcc cccttcgcct tccgccatga ttgnaagctt cctgaggcyt ccccagaagc       300
     cgagcagatg ccagcgccat gcttcctgta cagcctgcag aaccgtgagc caattaaacc       360
     tcttttcttt ataaattacc cagtctcagg tatttcttta tagcaatgtg agaacagact       420
     aataca                                                                  426
//
ID   CERV1_INT   repbase; DNA   ; PRI   ; 7337 BP.
XX
AC   .
XX
DT   17-AUG-2004 (Rel. 9.07, Created)
DT   17-AUG-2004 (Rel. 9.07, Last updated, Version 1)
XX
DE   Chimpanzee endogenous retrovirus CERV1 - a consensus.
XX
KW   ERV1; Endogenous Retrovirus; Interspersed Repeat; LTR; CERV1_INT;
KW   Internal sequence of chimpanzee endogenous.
XX
OS   Pan troglodytes
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Pan.
XX
RN   [1]
RP   1-7337
RA   Skaletsky H., Hughes F.J., Page C.D.;
RT   "Consensus sequence of an endogenous retrovirus CERV1.";
RL   Repbase Reports 4(7), 189-189 (2004).
XX
CC   [1] (Consensus)
XX
CC   Internal sequence of an endogenous retrovirus with ORFs
CC   for gag (961-2370), pol (3042-5624) and env (5618-7288). CERV1
CC   is absent from the human genome. It is similar to an
CC   uncharacterized interspersed repeat mulatta and Papio anubis
CC   genomes.
XX
SQ   Sequence 7337 BP; 1892 A; 2103 C; 1788 G; 1546 T; 8 other;
     tctgggggcc cgtccgggat tccccaagcc caccagaccc ctggtcaacg gatctgctag        60
     gatcgatcta ctgataggtg agctggctcg tctccgtttg tctgtctgtg tctgttctga       120
     atccgaatct gtgactcgcg aggtctgaaa ctggagctgg cacagtcctg gcggacgcgc       180
     tataggacgg ccagcggaga ccggtgggag acgtcccctg gctctcatct gatctatatt       240
     gcgatctgag ctgccccggt ttggcgggca gcagccgtat ctgagctgcc cggttgatcg       300
     ggcagcatct gtctctgatc tgagctgccc cggttgcggc agcagcctat ctgactgccc       360
     ggttgggcgg gcagcagctg tctctgatct gagctgcccc agcagctgtc tctgatctga       420
     gctgccagta nctgtctctg atctgagctg ccccggtttg gcgggcagca gctgttcatc       480
     tgagctgccc ngttnggcng gcagcanctg tctctgatct gagctgcccg gcgggcagca       540
     gctgtctctg atctgagctg ccccggtttg gcgggcagca gctgtctctg atctgagctg       600
     ccccagtgca gccgtatctg agggcagctg tctctgatct gagctgcccg gcgggcagca       660
     gctgagctgc cccggtttgg cgggcagcag ctgtctctga tctgcccggt tnggcgggca       720
     gcagctgtct ctatctgagc tgccccggtt tggcgggcag cagctgtctc tgatctgagc       780
     tgccccggtt tggcgggggc tgccccagtg cgntcggctg ccccggggcg cagctgcctc       840
     tgaccagggc tgccaaagtg cgcctgcgat tagatatcat taataagttc agatcagatt       900
     tcctttacag ggattcaaac ccacattcct ttacaggaag agactacaaa ttattacagg       960
     atgggtaata cccagagcac tcctctatct ctccttacga gtaatttcaa agaagttaga      1020
     gcaaggggcc atgatcttgg tatagaaatc aggaaaggaa agctaattac tctgtgtcgc      1080
     tccgaatggc ctgcctttga tgtggggtgg ccgcccgaag ggaccttccg acttgctgtc      1140
     atcactaggg taaagtccaa gattttccta cctgggcgtg cgggccactt agatcaaatc      1200
     ccatatatcc tcatatggca ggaccttgtt gagaacccgc ctccttggct gtcccctttc      1260
     caattggcct ctgaaccctg taaggcacta gttgctcgac cactaaaatc caagcaacca      1320
     actgcccccc ccatcctgtt ctacctgaca gcggggaccc actgttcaca gaaccccctc      1380
     cgtacccctc cgggccccag gccccagccc ccctggctga gctgcgggag ggagcaggcg      1440
     gacgggaggc ggccggcaca cacgggcccg ctgaaaggga aagtaacttt gaagggccgg      1500
     cggggaggac gcgagggcgc acttcgcgga ctagcccccc ctcagccgcc tgactccacg      1560
     gtggctttac cccttcggga aataggaccc ccagatgaca caggaatccc caggctccag      1620
     tactggccat tctccaccag tgatctgtat aactggaaaa ctcagagtgc tcggttttca      1680
     gacaacccca aagatttact ggctttacta gatagtgtca tgttcaccca ccagcccact      1740
     tgggatgatt gtcagcagct cctccgaatt ttgttcacca cggaagagcg agagagaata      1800
     cagatagaag ctagaaagct ggtcccgggg gacgacggtc aaccgactgc caaccccgac      1860
     ctcataaacg caacctttcc tctgaccagg ccggcgtggg actacaacac ggcagaaggt      1920
     aggggacggc tacaccttta tcgccagact ctaatggcag gtctccgggc agctgctcgc      1980
     aagcccacta atttggctaa agtatattct attctgcagg gaaagacaga gagcccagct      2040
     acctacttag aaagattaat ggaagctttt agacagtaca cccccataga tccagaggct      2100
     ccaggaagtc aggcagctgt tgtaatgtct ttcgtaaatc aggcagcccc agatattaag      2160
     agaaaactcc agaaattaga agacttggag ggaaagcgga ttcaggacct ccttcagata      2220
     gcccagcggg tttacaataa cagagatact ccagaggaaa agcaatttaa ggccactgaa      2280
     aaaatgacca aggtcctggc agcagtggta cagaaagagc atctacagcc agagtacacc      2340
     caacctaggc ggccccccgg catgataatc tgagcaaaga ccaatgtgcc tattgtaagg      2400
     gggctggcca ctaggtaaga gactgcccca aaaagaaacc acgaggacag ggacccgcct      2460
     aggtctacac ccgtactagt cactcaagac gaagactagg gaagacgggg ttcggacccc      2520
     ctccccgaac ctagggtaac tttgcaagtg gaggggtccc cagtccagtt cttggtcgat      2580
     acnggagcac agcactcggt cttagttaaa actaatggga aattatcctc caaatcctcg      2640
     tgggtacaag gggccacagg agttaagaaa tacccatgga caacacaaag aacagtaaac      2700
     ctcggagcca agaatgtaac ccattctttc ctggtcatcc ctgagagccc ctgtccccta      2760
     ttggggagag acctgctaac taaaatggag cacagatcca tttcctccct gaggggcccg      2820
     tcgtgaccaa ctcccacaat cgaccgtgtc ctcctgacta taaacctaga agatgagtac      2880
     cggctccacc aggagaaagc ggcccctgac caggacatag caactggctc cagcatatcc      2940
     agaagcgtgg gcggaaacgg ggggcttagg tctagcaaaa cacctcctgc cttatttatt      3000
     gaacttaagc ctggacagac ccctgcggta cgccataccc gatgccccta gagccaagaa      3060
     gttcctccag cccccacccg agagacacaa gaagacagac accctactca catcaatggt      3120
     acgttactct gaccgaggaa gaacctaacc gccaactgct taagggaggg cagcgctggc      3180
     taacagacgc ccggaaacaa actgttctgc agatccccag gccacaatcc acccgacaag      3240
     tgagagaatt cctggggtcg gcaggatttt gcagactatg gatacctggg ttcgcagaac      3300
     tggctaaacc cttgtatcag gcaacacggg ggcaacagcc atttaattgg acagacgaag      3360
     ccgagttggc cttccaacag attaaaaccg ccctactctc cgcgcctgca ctaggactac      3420
     ctgatgttac caagcccttc cacttatacg tggatgagaa taagggtgtc gccaaggcgg      3480
     taataactca gaacttaggc ccctggcgga ggccagttgc ctacctgtca aagaagttag      3540
     acccagtagc tgccgggtgg cccccttgtc tccgaatgat tgcggccacg gctctgatgg      3600
     tgcaagatgc tgataaactt gtcatggggc aagaattgcg ggtcgttact ccacatgcca      3660
     tcgaaggtgt actcaaacag ccacctaatc gatggatgag taacgcccgg ctcacccact      3720
     accaaggact actactaaat cctctcagga taattttcct gcccccaacg accttaaacc      3780
     ctgcctcgct gctgcccaac ccggacctgg acgccccact ccatgactgc accaagatac      3840
     tagctcaggt gcacggagtt cgagaagacc tgcaggaccg cccacttcct gacgccgacc      3900
     tcgtctggtt cactgatggg agcagcttca tgcatcaagg ccagaggtac gctggagcgg      3960
     cagtaacttc agagactgag gtaatctggg cggaacccct gcccccgggg acatcggccc      4020
     agaaggccga actgatagcg ctcacccaag ctcttacctt aggggcgggg aaaaagctga      4080
     cagtatatac agacagccga tatgcttttg caacggcgca tatacatggg gccatttaca      4140
     gggagcgagg gttactgacg gctgaaggaa aagagataaa aaacaagcaa gagatcctag      4200
     ccctgctaac agccctatgg aggccagaaa aattagccat tgtacattgc ccagggcatc      4260
     agaaactaac tactccaact gctcaaggca actttctggc agaccaaact gcaaggaatg      4320
     tggcgaaggc tcccagccaa ctccttgcac tccagctccc tgacccgggc ccccgggact      4380
     tgccatattt ccctgaatat tcagaacaag atctccagtg gattgacaaa cttcccctga      4440
     aacaaatcca gaatgggtgg tggactgata ctaatgacca aaccatccta ccagaaaaat      4500
     taggacaaca ggtgttagaa cacatccacc gaaccaccca cctgggggcc cggcggatga      4560
     tagacctgat cagacgctcc aagctcaaaa tcagacatat agctgagacg gccagcagta      4620
     tcgtgacaag ttgcaaagtc tgccagctta acaacgcata cccccaatct caagctgcaa      4680
     caggaacaag gctcagggga accaggcccg gtatctactg ggaagtagat tttactgaaa      4740
     taaagccagg aaagtacggg taccggtact tacttgtctt tgtagatact ttttcagggt      4800
     ggactgaagc attcccaacc aaaagagaaa ctgctcaggt cgtagcaaag aaaattctgg      4860
     aagatatcct tcccaggtat ggcttcccca tccagatagg gtcagataat gggcccgctt      4920
     tcgtcgctaa ggtaagtcag gacttggctt ccatccttgg ggcaaattgg aaactacatt      4980
     gcgcttacag gccccagagt tcaggacagg tagaaaggat gaatcggacc ttaaaagaga      5040
     ccttaactaa attgactata gagactggcg ctaattgggt agtccttctc ccctatgctc      5100
     tgttccgggc ccgtaatacc ccttacaaac tgggcctcac cccttacgaa atcatgtatg      5160
     gcagacctcc acccctggtt cctagcttaa aagatgacct gcttaagtct gaaacagaaa      5220
     atgtctctga attcttattt tccttacaag ccttacagaa aattcaccaa gaaatctggc      5280
     ccaagctgaa agagctatat gagaccagtc ccccaccgac accccatccg taccagccgg      5340
     gagactgggt cctggttaag cgacaccgac aagagaccct agagcccagg tggaaaggac      5400
     cactccaagt actcctgacc acacccaccg ccctgaaggt agaaggcatt gcgtcgtgga      5460
     tccactacac ccacgtcaag ccagtggacc caacctccga ccttctgggg ccaatcacgg      5520
     cggcggcggc tgaagcaccg gacacgtgga ctgtggacag agctaagaac aaccccttaa      5580
     aactcaccct gcgccggcag cataactcac tgcaaacatg cagttaggta gtctaactct      5640
     aacattagtc gccctagtgg ccgctgggga aaacataaag ccagctccta atccctttgt      5700
     ctggagattc tggctttatg aaaaccaaac ccaccctggg caacctcata agcccgggaa      5760
     attagtggcc agtgcagatt gcccctcctc agggtgcaat agcccaattt tactaaattt      5820
     taccgatttc ccagtagcca aaccagtggc accaataata tgcttcgagt atgatcagac      5880
     tgaatacaat tgtaagcact attggtggca ccaaagtgcc ggctgccctt ataactattg      5940
     taacatccat aaataccaat ggtggggtgg agaagaacag atagatccca gatggccctt      6000
     ccatcgcaga cgagatagag acctttcata tacatggata gttagagacc cctggaactc      6060
     ccgctggacc acgcctcaac acggggctgt atactactcc tccgcctcca catggcctag      6120
     cagtcacctc tatctgtggc ggggtctagt gcaggtacgg cccctggtcc atggaaatat      6180
     ccagcgacaa gaaaaccgcc tgacacaaga tttacgtcct ttttcctggt taaaattatt      6240
     gcaagaagga ttagaacttg ccaaccttac aggacttcac agcctgtctg gctgctttct      6300
     atgtgccact ctagggcgtc caccgctaac cgctgtcccc ctgccatggg gatcatccac      6360
     ctctgcccaa gctaacaacc accaaaacct ctcatatgcc cctatcccta acgtgccact      6420
     atacctaaac cccagtcaag agaagtttcc ctactgtttc tcaggaacta attccagcct      6480
     ctgcaacatc actgcaacgc cccctaacat caccttaagg gctccgtcag gcatattctt      6540
     ctggtgtaat ggaacattat ctaaaaacct atcaagcccc tctgttacca acctactgtg      6600
     tcttcctgtc acattagttc cccggttaac tctacttact gccggcgagt tcctagggta      6660
     taccggtaac tggactagtg ctgttattca cccagaccct agaccgagac ctgcacgagc      6720
     catatttctc cccctcattg caggaatctc cctcaccgca tccttcatgg cggccggact      6780
     ggctggggga gccctaggtc acacccttat agaaagtaac aagctgtacc aacaatttgc      6840
     cgttgctatg gaggagtcag ctgagtccct tgcctccctc cagcggcagc tcacgtccct      6900
     agcacaggta accttgcaga accggagggc cttagaccta ctcactgctg aaaaaggggg      6960
     aacgtgtatg tttctaaagg aagactgttg tttctacata aatgaatcag gactcgtgga      7020
     agaccgagtc caacagttac gcaagttaag cacagaagta agaacacggc agtttgcttc      7080
     agctgcagac caatggtgga actcatctat gttttctctg ttagccccct tccttggacc      7140
     cctgctgagt ctactatttc tgcttaccgt aggaccttgt gttgttaaca gaattttgcg      7200
     gttcgttaaa gaaaggttta acactgtaca actcatggtc ctcagagccc aataccaacc      7260
     tgtaaacgct gaaacagaat cagacttata agacccaaga ttggctctaa aaaatacctg      7320
     aaaagaaagg gggggaa                                                     7337
//
ID   THE1B       repbase; DNA   ; PRI   ; 364 BP.
XX
AC   .
XX
DT   01-OCT-1995 (Rel. 3.6, Created)
DT   23-JAN-1998 (Rel. 6.4, Last updated, Version 3)
XX
DE   Transposon-like human element long terminal repeat (THE1b
DE   subfamily) - a consensus.
XX
KW   Non-LTR retrotransposon; MaLR family; THE1b subfamily; THE1B.
XX
OS   Hominidae
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Primates; Catarrhini.
XX
RN   [1]
RP   1-364
RA   Sun L., Paulson E.K., Schmid W.C., Kadyk L., Leinwand L.;
RT   "Non-Alu family interspersed repeats in human DNA and their
RT   transcriptional activity.";
RL   Nucleic Acids Res 12, 2669-2690 (1984).
XX
RN   [2]
RP   1-364
RA   Paulson E.K., Deka N., Schmid W.C., Misra R., Schindler W.C.,
RA   Rush G.M., Kadyk L., Leinwand L.;
RT   "A transposon-like element in human DNA.";
RL   Nature 316, 359-361 (1985).
XX
RN   [3]
RP   1-364
RA   Smit F.A.;
RT   "Identification of a new, abundant superfamily of mammalian
RT   LTR-transposons.";
RL   Nucleic Acids Res 21(8), 1863-1872 (1993).
XX
CC   [3] (Consensus)
XX
CC   Replaces OFR sequence.
XX
SQ   Sequence 364 BP; 74 A; 89 C; 88 G; 108 T; 5 other;
     tgatatggtt tggctgtgtc cccacccaaa tctcatcttg aattgtagct cccataattc        60
     ccacgtgtcg tgggagggac ccggtgggag gtaattgaat catgggggcg ggtctttccc       120
     gtgctgttct cgtgatagtg aataagtctc acgagatctg atggttttat aaaggggagt       180
     tyccctgcac angctctctt gcctgccgcc atgtaagacg tgmctttgct cctccttcgc       240
     cttcygccat gattgtgagg cctccccagc catgtggaac tgtgagtcca ttaaacctct       300
     ttyctttata aattacccag tctcgggtat gtctttatta gcagcatgag aacggactaa       360
     taca                                                                    364
//
