ID   RETRO19_AG_LTR repbase; DNA   ; ANG   ; 404 BP.
XX
AC   .
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae gypsy-type long terminal repeat from RETRO19_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; GYPSY superfamily; RETRO19_AG_I;
KW   RETRO19_AG_LTR.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-404
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO19_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2(12), 4-4 (2002).
XX
CC   [1] (Consensus)
XX
CC   Related to MDG1, TABOR, DM412, STALKER2, and BLOOD retrotransposons
CC   from Drosophila melanogaster. 4 bp target site duplication.
XX
SQ   Sequence 404 BP; 166 A; 40 C; 88 G; 110 T; 0 others;
     tgtggcgcat acacataggc gtaatgaata taattatagt aagctatata gcagaaatta        60
     tagtaagcta tctttatagg aatagttgtg attggtagaa gcgtgttagt ataggttaga       120
     ataggatagc taatacgaaa agataaggat agaataggta gcataggaaa ttaggcataa       180
     gacggaatta aggatacata ggaagtaaat gaattaagct aggattagat agggaaattt       240
     tagtataaat agcgggatag gatttaggat agtcagataa aagttagact tcataagggg       300
     aaactctgtc caattataga gaaaattata gagagtataa ataaaagtta cagttccaac       360
     aaaacacccc tttttcaatt gtacactaaa agtgatatac caca                        404
//
ID   RETRO935_AG_LTR repbase; DNA   ; ANG   ; 350 BP.
XX
AC   .
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO935_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; NINJA; RETRO935_AG_I;
KW   RETRO935_AG_LTR.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-350
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO935_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2(12), 21-21 (2002).
XX
CC   [1] (Consensus)
XX
CC   Related to NINJA from Drosophila simulans. 5 bp target site
CC   duplication.
XX
SQ   Sequence 350 BP; 88 A; 72 C; 93 G; 97 T; 0 others;
     tgtcacttat ggtgacgacg cgatcgttcg aggatcgaca aggagcgtcc gtattttagc        60
     tagcggccgc tagaggtctc ggactggacg ataaacgttc ggactgaacg aaagggatcg       120
     accgagcgtt tgacggatag ccggtgaccg catggactgc gaaatagggc tttctttttg       180
     atcccggacc tgcgtggaag cggacgaatt tttagttttt tcttcactct ctcggctact       240
     aaaattttgt gctgttaaag gcaaaataaa ataatcctga attacttaaa aaagccgttt       300
     gtttggtaaa ttatttatct gcaggccggg cgttgtgcta acgcgcaaca                  350
//
ID   RETRO937_AG_LTR repbase; DNA   ; ANG   ; 366 BP.
XX
AC   .
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO937_AG
DE   retrotransposon - a consensus.
XX
KW   Long terminal repeat; retrotransposon; NINJA; RETRO937_AG_I;
KW   RETRO937_AG_LTR.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-366
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO937_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2(12), 22-22 (2002).
XX
CC   [1] (Consensus)
XX
CC   Related to NINJA from Drosophila simulans. 5 bp target site
CC   duplication.
XX
SQ   Sequence 366 BP; 119 A; 74 C; 79 G; 94 T; 0 others;
     tgttattgtt taacacagga aaacatcgaa tgtcagcgca agtgtcaagc agtgacattt        60
     gacccacgtt actgctcgac tgtgggactg ctcgactaac gatgaggatc gcaagcccgc       120
     gaatttgcaa tggtggaaaa gccataaaag ggaaatttgg gaaagcactt tctctttttc       180
     tcgtcatcac cgcggaacca gaagcagtgg aattttttta accactttgt tataagtaaa       240
     tttacagtac caccgttacg tactgcgtta atagaattca ataaagtgaa gttaagagaa       300
     cctaactaac gtcgcgagtg aatcatttcg ggaaaaaaaa tatcaccgga cgttgctaac       360
     gcaaca                                                                  366
//
ID   GYPSY6-I_AG repbase; DNA   ; ANG   ; 4618 BP.
XX
AC   .
XX
DT   25-FEB-2005 (Rel. 1, Created)
DT   25-FEB-2005 (Rel. 1, Last updated, Version 1)
XX
DE   GYPSY6-I_AG is an internal portion of the GYPSY6_AG LTR
DE   retrotransposon - a consensus sequence.
XX
KW   gag; LTR retrotransposon; reverse transcriptase; integrase; 4-bp TSD;
KW   GYPSY6-I_AG; GYPSY6-LTR_AG; GYPSY6_AG; Gyspy clade.
XX
OS   Anopheles gambiae str. PEST
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles; Anopheles gambiae.
XX
RN   [1]
RP   1-4618
RA   Pavlicek A., Kapitonov V.V., Jurka J.;
RT   "GYPSY6_AG, a family of LTR retrotransposons from African malaria
RT   mosquito.";
RL   Repbase Reports 3(4), 81-81 (2003).
XX
CC   [1] (Consensus)
XX
CC   GYPSY6_AG is a family of autonomous gypsy-like LTR retrotransposons.
CC   GYPSY6-I_AG, an internal portion of GYPSY6_AG, is flanked by
CC   GYPSY6-LTR_AG LTRs. The GYPSY6-I_AG consensus sequence was
CC   reconstructed based on multiple alignment of 3 copies; they are
CC   less than 1% divergent from the consensus sequence. Two elements are
CC   nearly 100% identical to the consensus and contain intact ORF, thus
CC   the family appear to be active.
CC   The consensus sequence encodes the 1511-aa GYPSY6_AGp protein
CC   (pos. 28-4560), composed of gag (zinc-finger, 317-353), reverse
CC   transcriptase (pos.690-859) and integrase (pos. 1207-1350)
CC   domains.
XX
SQ   Sequence 4618 BP; 1568 A; 860 C; 899 G; 1291 T; 0 others;
     tctcagaagt gggattagtg accaaaaatg tccaaagaag acggaaaagt gttgcgtgag        60
     ttggaatcag tcagttgtcc taactcggaa cccgcaacaa ttggcaaaat tcgtgcgctg       120
     tacaacgatg tgctatcaat tactaacact atcgaaagcg aatgcattga tcagggagac       180
     gttgacccta agccaacgta tagtgtaaca aaggaagaag catcgtcagc aaaacccatg       240
     catttatcta accatgtgga agatgaaatt gctattctca agcaaaggct tgaaattttg       300
     gaactacgaa gtaaaatagc ggtgcttgaa aatgaaaaac aagccagtaa gattaatcag       360
     cctttgctac cagaagcgtt gaaacaaatc atcccgcagt tcgaagacgg cgttggtgtt       420
     aaccattggt taaaagtgat cgatcacagc tccgagatgt atgggtggga cgacaataca       480
     actatgcttt atgcaagtag ccgattagtc ggtgcagcca aagaatggta caatggttgt       540
     cgtagcgaaa tatgtacctt gtccgaattt acagcgggat tgaagagagc ttttcctgac       600
     aatcgaaatg aagcggctat acataaagaa cttatgagtg tcgctaaaag gagagacgag       660
     acgtacaccg catttattta tcgagtgaat gctattggta aatcgggcaa tgtaagcgat       720
     gaagctattt taacgtacat cataaatggc ttggcacgtg ataggattta cgataatctc       780
     gtagtgcgtg actataaaga tatatatgaa ctgatggcgc acattcaacg atgcgaaact       840
     cttcttaaaa tgcgtgatac accaagtacc tcgtcctacc aacgtttaga aaacacacgg       900
     gttaatgaaa atcaacgtga gaaaccgaac agagcagcgc agatcaacag aaaggacgca       960
     cttgctagtg tgcgttgcta caactgctct agttttgggc attattccgg ccagtgcctg      1020
     aagcctcgac gaacgattgg tgcatgtttc tcgtgtggac agcacgatca tcaaaagctt      1080
     gaatgcgcca atgcagccgg gaagaacaat atacctgttt ttgcaactaa tgaaactaca      1140
     agcgagaggg atagctatgc cgatatagag aaaattaaag cgtaccaaca agtaagtgtt      1200
     agtttagaaa cgttaaatgg ggttaagaag ttccattcat atgtttattc attgttcgat      1260
     tctggcagcc cgacgagttt tatcagtgaa actttcgtcc cagatggagc cgcgaaaaag      1320
     gcttctcctt ccggatacaa gggactaggg aataaaccac tttcgtcgct tggacacatt      1380
     gtctgcaata ttggatttcg tcataaaatc atatctcatc ggtttataat cctttccaaa      1440
     tcagacatgg attggccaat cataatcggt agagatgctt tggataagtt aaacgttcat      1500
     ttgtatcact cattttattt gtatagtaaa gagaaattat tgagcttgaa taataaaaca      1560
     atgaattact tgaagccaca tatgatggaa cgccttatct cattgggggt tttgaaaaat      1620
     gattcggatg acaggttgaa gcgtaaaatg ccacttatta aagctataga agaaaacaaa      1680
     tacaatctaa aagagatacc attccatagc ctaaaccacg cgattctaga aagttctctt      1740
     tctaatcgga aaaaagatga taatagtaat caatccttca tttctgatga attcaaatat      1800
     ggtgaaactt ttgctgaaat gtgtgctata gatgtcaatt tgccggaaca tgattttaat      1860
     attgggtcta tagttggaat tcgggaaaga aagcaaatta gctctattat tatcgataac      1920
     tatatcaaac gtcagacagg taaaatatac aaagaaaatc ataaaatgac gataagctta      1980
     acacacgata cacctatttt ctgtaagcca cggaaacttt cttttgcgga acgaaatcat      2040
     gtgcgtgaaa ttgttaaaga tcttcttcaa agaaaaataa tccgacaaag taactcagca      2100
     tatgcttctc caattgtttt agttaaaaag aaaaatggtg aaacaaggat gtgtatcgat      2160
     tacagaccaa ttaacaaaat aaccgtacga gataactatc cattaccttt gatagacaca      2220
     tgtattgaac acttgggaga taaacaatat tttactttac tggaccttaa aaatggattc      2280
     catcaaatag atatggcccc agcatcgata aagtatacag catttgtcac cccagatgga      2340
     caatacgagt acgttaaaat gccgtttggt ttaaaaaatg ctccctcaga gtttcaaaga      2400
     tgtatcaatt ccgtattacg ggaatttata gataaccgtg agattgtcgt ttacctcgat      2460
     gatattatta tagcatcaaa ggacttacac aatcatcttc gaatattaag tgcagtttta      2520
     caaacaattc gtaaaaatgg ccttgagtta aagttagaaa agtgtatgtt tgttcatgat      2580
     gaactagact accttggcta ccatgcaagt agtaaaggaa tacgacctag caattatcat      2640
     attaaagcaa ttgaaaacta tcctcagcct tcaaatagca aggaagtaca gagatgtctc      2700
     ggactattct catattttcg aagatttgtg ccatctttct cgactattgc aaaaccttta      2760
     agtagtttat taaaacaaaa tgcaccgtat aactttgatg gtccctgcat tagtgcattc      2820
     aatacactga aagaaatgtt gataaaagca cctgtgttag ctatttacga tccgcaaaaa      2880
     gaaacagagc tgcattgcga tgctagttca gtaggatttg ggtcagtact tctacagaaa      2940
     caatttgatg gaaaatttca tcccattgca tttttctcaa aaaccgcatc gcccgcggaa      3000
     gcgaaattgc acagctatga attggaaacg ctttcagtta tttatgctct gaaacgattt      3060
     cacacgtatg tacatggcgt accaatacga atagtaaccg attgcaactc tttagttgaa      3120
     acattaaaaa acaaaaattg ttcagcaaaa atagcacgat ggtcactttt tttagaaaat      3180
     tacgactata ccatgcaata ccgtcccggg tgttcgatgg gtcatgtaga tgctttaagc      3240
     cgccaacaaa tagcagtagc tacacaagat cttgatattg actctcagct gcgaattgca      3300
     caatctcgag atcaagaaat tgaaagactc aaaagtgtca tcgaaagagg gatggttaat      3360
     ggttacacct tgcatgacaa cttagtattt cgtaagcttg aaaatggaag attgcagttt      3420
     cgcgttccca gagacatgat taataatgta ataagaagta ctcatgaaag tataggtcat      3480
     cttggggtgg ataaatgctg tactcagata agtaaaaact attggtttcc attgatgaaa      3540
     actcgagtgg aaaatttcat aaaaaattgt ctaaaatgta taatttactc tgcaccagcc      3600
     cgaaaaaata atcgaaatct acatagtata cctaaaattc cactaccatt tgatacgatc      3660
     cacatcgatc acctaggacc tctaccatct ttgcagtcaa aaaagaaata catccttgtt      3720
     gtcattgatg catttacaaa atttacaaaa ttatatccta caactaacac tagcagtcgt      3780
     gaggtttgta atgctcttaa ccagtacttt tcatatttca gtcgccctag gcggctaata      3840
     agcgatcgtg cctcttcttt tacatcgacc gaattcaaac aatttattct taaacataat      3900
     atcacgcatg ttctaacagc cgtttgctcc cctcaagcga atggtcaagt agagcgagta      3960
     aaccgtgtaa ttgttcccat tttgagtaag ctttctgatc caattgacca cgcagattgg      4020
     agttcgaaat tgattgcagc tgagtatgct ttaaataata cggtacattc atctacacgc      4080
     atttctcctt ctgttttact gtatggaatt gaacaaaaag ggccgaacat aaatgaatta      4140
     acagaatacc tcaaagacaa tattccaacc actccccgag atttagaaag catccgtgtt      4200
     caagcatctg aaaatattgt caattcgcaa ttcactaatg aaacacaatt tatgaaaacc      4260
     caccggccag ctatagaatt tgaagtcgga gaatatgtcg ttatacgcaa tgttgacaat      4320
     agcgttaaca cgaataagaa attaatcgct aagtttcggg ggccttatgt tatccataaa      4380
     cgcctcccta acgatcgtta tgtggttcga gacatagaag gatttcaaca aactcagata      4440
     ccttacgacg gagttttaga atctgataag cttaggagat ggattgcatc tgaaaccgat      4500
     ctggcgtccg aatcattaga agtaagtccc tcagatagtt tggcaggacc agatttaggt      4560
     tagttaggtt aattataatg taaattgagg tcaattcata cgtcaggata ggccgagc        4618
//
ID   RETRO23_AG_LTR repbase; DNA   ; ANG   ; 720 BP.
XX
AC   .
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO23_AG retrotransposon
DE   - a consensus.
XX
KW   Long terminal repeat; retrotransposon; RETRO23_AG_I; RETRO23_AG_LTR.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-720
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO23_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2(12), 7-7 (2002).
XX
CC   [1] (Consensus)
XX
CC   4 bp target site duplication.
XX
SQ   Sequence 720 BP; 172 A; 112 C; 179 G; 257 T; 0 others;
     tgtaatgtga tgatcgtaca actgtacttc gagtaccgtc gcggtaggtc agtgttttac        60
     tgacatgagc cgaggtggaa taaaacttcg ttcgaagcgg acttttcgac acttgatcgt       120
     ccaggcgatc atagaaacct ttaggaggtt tcccttactg gaaacgttgg agtttagagg       180
     ccttaccttg ggtaggggga cataactaaa ctctttaaat gagaagtcga tagatgtagg       240
     atgggcatag tcctatcctg acagtccgaa cgaatctgac ttgccatgat cggagttggt       300
     tttatttata ctcaaaagaa gttaagggtt tctcacattt ggttccgggt tgtatgttgg       360
     aaagttattg ttttcactca gctagttacg tttgtctttt gttgacaaga acgatggttc       420
     ttgtcactaa gttcctgttt tgggtttaat gcatatactg ttcctgcttt gggttataat       480
     gcataaactg ttcctgctta tgttgtacgt ttcggttggt tctgataagt gtgtcacaat       540
     tgtttttata tgaacggtgt ggcctgagct cttccgggtg tgtatggtat gatctgattt       600
     actgaatgtg ttataatgaa tgtgttacaa tggtgtggtt tggctttcca aagtgtgtta       660
     caatgtgtct atagctgata gtgtgtatta taataagttc tgtatagcag atatgctaca       720
//
ID   RETRO56_AG_LTR repbase; DNA   ; ANG   ; 141 BP.
XX
AC   .
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO56_AG retrotransposon
DE   - a consensus.
XX
KW   Long terminal repeat; retrotransposon; MAG; RETRO56_AG_I;
KW   RETRO56_AG_LTR.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-141
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO56_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2(12), 12-12 (2002).
XX
CC   [1] (Consensus)
XX
CC   Related to MAG from Bombyx mori. 5 bp target site duplication.
XX
SQ   Sequence 141 BP; 49 A; 27 C; 26 G; 39 T; 0 others;
     tgttgcatag taacacgcat aacgcagtaa cattgcaaga ctcgatcaga gtacacattg        60
     agtgaataaa gacgattcca ttctgaacta aggaataaag cagttgtgtt tttctcaaga       120
     tatattccct gcgacatatc a                                                 141
//
ID   T1_AG       repbase; DNA   ; ANG   ; 4634 BP.
XX
AC   M93689;
XX
DT   22-1995 (Rel. 2, Created)
DT   25-MAR-1997 (Rel. 3, Last updated, Version 2)
XX
DE   Anopheles gambiae T1 retroposon.
XX
KW   reverse transcriptase; retroposon; Transpsoson; AGT1; T1_AG.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-4634
RA   Besansky J.N.;
RT   "A retrotransposable element from the mosquito Anopheles gambiae.";
RL   Mol. Cell. Biol 10, 863-871 (1990).
XX
DR   GenBank; M93689; Positions       1    4634.
XX
SQ   Sequence 4634 BP; 1059 A; 1101 C; 880 G; 1593 T; 1 others;
     agagagagat cgactgtcaa accgagtggt tgtgccttcc ttgtgctcct gatttttgat        60
     gctgttttgc cgtgttactg cctgattttc aacatttgca acattggtgc tgctgagttg       120
     cttgtactgg ctagtgcgtg ccttcgattg ttatcaagtt gcacttgaat tcttgcacct       180
     agtctcctgt tatttcgtca gttttgccga gatattgttt ggcttcgttc ctgctcctgt       240
     cactcgtcag tttgtgctgt gtcattcgtt atgcagtgct caacctgcaa tgcacccacc       300
     gatagtgcaa attcggtgtc ctgcgccggt gtgtgtggct ccaagcatca tacccattgc       360
     acgggtttgt cccgtgattc tactcgagag cttgggcgga ataatcaatt gttgtggttg       420
     tgcaaaaatt gtaacgagtt tcgcaatggc acaaactcac ttctcacaag tgagatagca       480
     gccctactcg agttggtgaa agcagaaatt ctcaccacga ttgactcatc tctctcttct       540
     cttagatcgg ctatcaagag cgatttgctt gctgagatcc tcgctctcgc tgataagcta       600
     acacccgtat tagctaagcc gtctgtttct cagccatcgc gaacgcacac gtccactaat       660
     gcatcgtcac tcaacgccac taataccaga acgactaaaa cagcatccac tcgccgtaca       720
     tttaccaact caatggagct cactgcagat atccaacaag cagcgaacga taccaacact       780
     gtggaagctt ctgatagctg caaccactac actcatcgta ctaaggtgac tagtgatatt       840
     agtgctgggc catgccgaac aaatacaaaa tcatcttctg atcctgtttt gaaccatgat       900
     accacgaaca ctggcatagc agaaaaagta tggttatact tcacgaacat caaatcgcat       960
     gtctccgctg atgatatgcg tgtgtggctt aaagctgtgc tgccaaccga caacatagat      1020
     gtttaccgtc tcacgaaaaa gggtgcaaac cttgatttga tgtcctttat atcgtttaaa      1080
     gtgagtattc ctaaatcact taaggatctg gcgcttcaat ctactatttg gccagtttca      1140
     cttactgttc gtgagtttgt tgatcgtggc ctaccaaagc aacgtataca tgaaagggcc      1200
     cgatttgacc cttctgcgct tacttcgcat cgttcaagca gtgcaaattg ctcttcagct      1260
     gcgccaaaaa gcaccgctca tccggatcat tttttggatc atcgatcgcc atccccacag      1320
     cgcgggaatc aatcactatc ccagatgacc gagatcctag aggctatcca accggagttt      1380
     cctcccacac cccctcagtt atcaccgggg gtggggcttc aatcacagaa caatctcagc      1440
     aacacgaatc gctcaccaca gatcagcccg tttgccaaac ggatagctca caattaatag      1500
     acccttcgtg atctattacc aaaatgttcg aggccttcgc accaaatata atgaattgcg      1560
     cctttctgcg aatgaatcag ggtttgaaat gcttgccctt actgaaacct ggttaaatga      1620
     atcgattcca tccaatatgg tcctggatag tgattcttac aatatatacc gttgcgatcg      1680
     cagcaggtta aacaatgaac gatcgcgtgg gggtggtgtg ctgcttgcat gttccagtcg      1740
     ttatccgtct gtggcactta acatgaatca acctacgctt gaagctttat gtattcgtgt      1800
     ttcttttcct aagtttcgtc tttatgtggg gattgtttat gtgccaccgt atttgagcag      1860
     cgaccgcaac tatttcgaat ccctttctgc tttcatcagn gatgcataca tgcatatgaa      1920
     accgaatgat catcttatcc ttcttggcga cttcaatcaa ccggcgttag ggtggtcgcc      1980
     tgcagccgca gtaaggtcag attcatcttt acctatgaga cattatgtgc cacatatctc      2040
     tttgaattca tccagttcct gctttttgga tgtgttaaat ttgcatgaac tctatcagct      2100
     gaacggggtg cataaccatt caaatcatta tctggacctg gtgctctcta actctgctgc      2160
     tgctgcttgt tcttctgtgt atcctgcttc gtcactgctc ctgccccagg atgcccatca      2220
     tcctgctctg gaaattgcgt taccgtcttc tttatttagg gctagtaggg ttaggaatga      2280
     attgccttct gctcctaatt cattgagtgt tcgttataat tttcgtctta cagactatcg      2340
     taaacttaat tctattctat ctcgtgccga ctggtctttt ttttatcaat gtacatcggt      2400
     cgacgaggct gtccaatcgt ttaatgcttt gttaacctct gcactccttt catgtacacc      2460
     tatttttcgt tcccctccta atcctccctg gtccaatcgt actcttcgca acctgaaaaa      2520
     ggatagaatg aaatatctta ggaggtatcg tctgaaccga tctgctttca actttcgttt      2580
     atttaagtac gctgcctctg cgcatcgact atacaacagg gctcgttttg aggcctattc      2640
     gagtagactg caatcgcgtt tccgttctga tccagcatcc ttctggcaat ttgttaggat      2700
     tcgaagaggg tgcaatacgt tacctaatga aatggtactt gattctcgaa ctgcctctac      2760
     gcctgttgag atctgtgagc tattctctgc acatttttcc caaatgtttg agccaccggt      2820
     tagtgaccct aaccttattg agggtgggct actctacacg ccagagaact taattaatct      2880
     ctccgatatt tcggttagct ctgaaacagt tgtacaggtg ttatttgggt tgaaacgttc      2940
     ttttactcct ggtccagatg gcattcctgc ctcagtttta ataaactgta aggacgtgct      3000
     tgctccacac cttgctaaaa ttttcaacct ttcactttct ctcggggtct ttcctgctct      3060
     ttggaaatcc tgttggcttt ttccggtaca caaaaaggga tgccgtagca ttgtctctaa      3120
     ttatcgtggg ataactcaaa catgtgccac agccaaaact tttgagctat gtatctttcc      3180
     aaccatactt catagttgta gttccgctat tagccctaaa cagcatgggt ttatgcctgg      3240
     taggtctact tctactaatc tcatgtcttt tgttaccaat attttcagat cttttgaggc      3300
     aggtacccaa cttgatgcaa tatacactga ctttcatgct gcatttgata gtttgcccca      3360
     ctctttacta ttagctaaac tatctaaact tggttttggt gatggcatta ttagctggct      3420
     gtcctcatac ttaagtaatc gatcttgcag ggttaaaacc gggtcgtact tatctgagga      3480
     gtttttttgt acgtcaggtg tccctcaggg ttgtgtgcta agtccacttc tgttttcttt      3540
     gttcatcaat gatgtctgta atgttttacc tcctgatggt catctccttt atgcggatga      3600
     tatcaaaatc tttttacctg tgtcctcttc ttctgattgt atgagtcttc agcattacct      3660
     taatgcattt gttcattggt gttcatccaa cttacttcgc ttgtgccctg ataaatgttc      3720
     tgttatttct ttctctcact ctctttctcc tatttcattt aactatactc tctctaactc      3780
     gtctctctct cgtgttttgt ccatccgtga ccttggtatt atactcgaca gtcgtcttaa      3840
     ctttaaactg cagcttgatg aggttctact aaaagctaat cgaactcttg ggtttatttt      3900
     acgttttacc tctattttta gagatcaaag cttcttaaga aacctttatt atgctctggt      3960
     aaggcctctt cttgaatatg ctagcatcat ctggaatcct cctactattg atggctgttc      4020
     gagaattgaa agcattcagc gcctttttac cagggttgct tttcgtcgtt tgttcggtgc      4080
     tgcctcacta cctccctatg aaacgcgatt gcagttattc aatcttcact ctttaagctt      4140
     ccgccgccaa gtgtctcagg catgttttat tggtggctta ttactttctg atactgatgc      4200
     tcctgattta ctctcgtcca tctcgttgta tgttccctct cgttcccttc gtcctcgtga      4260
     tcctctgtca attgaaacac gtcatactct ttatactttc aatgatccta ttctatcctg      4320
     tttcaggttg tttaaccact tttactatct ctttgatttc gactcctctc tcaactcttt      4380
     ccgtaaccgt attttttctt ctaattctct ttaattattc ttctaagttt cattaagttt      4440
     tgatagtctc tacgctctac ctatgttttt ttttctttaa tttttttgct aggtctagac      4500
     tagtttagtt aggcttagtt tttcatgaat tattttgttt atttgttagg gtttatttag      4560
     ttttaagtct gccttattta gccttgatgg cggatattgt attaataaat gaaatgaaat      4620
     gaaatgaaat gaaa                                                        4634
//
ID   AGRP1       repbase; DNA   ; ANG   ; 871 BP.
XX
AC   L11898;
XX
DT   28-SEP-1995 (Rel. 1, Created)
DT   28-SEP-1995 (Rel. 1, Last updated, Version 1)
XX
DE   Mosquito repetitive sequence.
XX
KW   Repetitive sequence; AGRP1.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-871
RA   Reiss A.R.;
RT   "A study of repetitive DNA elements in the malaria vector, Anopheles
RT   gambiae.";
RL   Thesis (1991).
XX
RN   [2]
RP   1-871
RA   Reiss A.R., MacIntyre J.R., Hagedorn H.H.;
RT   "A repetitive element of the Malaria vector, Anopheles gambiae.";
RL   Unpublished (1993).
XX
DR   GenBank; L11898; Positions       1     871.
XX
SQ   Sequence 871 BP; 263 A; 209 C; 213 G; 186 T; 0 others;
     ctcgagcaaa ccagagaggc gtacggaccg acacgaaagt tttaccaagc gatacgaggt        60
     caccgaaaca acgttgtacc taaggtaacc tgctgtcgca acaaggatga agatctggtt       120
     agtaaccatc cagaggtcct cttgcgatgg gctcagtact ttgatgaatt actcaacgac       180
     tagttcaacg agcagctaga agcgcactag ccgatagtgt catgcactgc cacctagagg       240
     aaacacaaag gcataccgtc ggctgaaaaa tccaccggca cccggaaccg accggaattg       300
     cagcgaactg gtcaagaatg gaggtgcacg acgtagaaaa cgaagtaatc atcattactg       360
     aggtgtggga tagcgaatcg atgccttgtg actggatctc ggcatcatgt accccatata       420
     caagaaggga gacaggttgg actgcaacta caggggtatt acgatgttga ttaccgcgta       480
     taaaatattc tccctgatcc ttcagtatcg ccttgtcccg cacgtcgaag agatagtagg       540
     aaactatcaa agaggattcc gaaacggaaa atctaccatt gatcagatct tcaccatgcg       600
     acagatcttg gagaagatgg ctgaatacag acacgacaca taccaactct tcattgactt       660
     caaagtcgca tatgatagca tagcctgggt aaaactatac gacgctatga gctcatttgg       720
     aatcccggcc aaactgataa ggctagttag aatgactatg accaacgtca catgccaggt       780
     gagggtggat ggaaaactct caggaccttt ttgccaggct tgcctgtctc ctattcaacc       840
     tggcgctaga gagggccatc cgcgactcga g                                      871
//
ID   RETRO25_AG_LTR repbase; DNA   ; ANG   ; 316 BP.
XX
AC   .
XX
DT   06-FEB-2003 (Rel. 4.1, Created)
DT   06-FEB-2003 (Rel. 4.1, Last updated, Version 1)
XX
DE   Anopheles gambiae long terminal repeat from RETRO25_AG retrotransposon
DE   - a consensus.
XX
KW   Long terminal repeat; retrotransposon; BEL; DIVER; RETRO25_AG_I;
KW   RETRO25_AG_LTR.
XX
OS   Anopheles gambiae
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae;
OC   Anopheles.
XX
RN   [1]
RP   1-316
RA   Jurka J., Drazkiewicz A.;
RT   "RETRO25_AG_LTR: LTR retrotransposon from Anopheles gambiae.";
RL   Repbase Reports 2(12), 8-8 (2002).
XX
CC   [1] (Consensus)
XX
CC   Related to BEL and DIVER from Drosophila melanogaster. 5 bp
CC   target site duplication.
XX
SQ   Sequence 316 BP; 89 A; 73 C; 60 G; 94 T; 0 others;
     tgttacggca agcgtaatgg taacgcgtca cccttagtac gcctagcgta aggtagaggg        60
     cgctttcaag aaatttacct acgtgtaaat tttacttaat cataattcta ttacgcagtg       120
     caaattgctg tagatcggta tcgtgcagct cgaattcccg caagtgcagc tcgaattacc       180
     gcaagtgcag ctcgaattcc cgaattctgc cgtatataag cgagtgtttt tcctgaataa       240
     atttagtcaa gttccagagt tcaaagcaac aacatcgtgt cttcatcatc ttcaaacttc       300
     ctcttcatca ttaaca                                                       316
//
