Repbase Reports |
|---|
| 2024, Volume 24, Issue 12 |
| December 20, 2024 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 9622 |
SINE2-2_Ilex |
|||
|---|---|---|---|
SINE2-2_Ilex, a consensus sequence for the holly genus. |
|||
|
Submitted: 03-Dec-2024 |
Accepted: 20-Dec-2024 |
||
|
Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-2_Ilex |
|||
|
Source: Ilex |
Organism: Ilex |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae |
|
| [] |
Authors: Aguilera,P.M. and Grabiele,M. |
||
|
Title: SINE retroposons from the yerba mate and related holly genomes. |
|||
|
Journal: Repbase Reports 24(12), 9622-9622 (2024) |
|||
Abstract: Analyzed genomes: I. asprella (NCBI:GCA_023539305.1), I aquifolium (NCBI:GCA_951799425.1), I. latifolia (NGDC:GWHBIST00000000) and I. polyneura (NGDC:GWHBDNW00000000). Consensus of 97 sequences; mean 91.8% identity to consensus. Additional features: tRNA-related region (1-82); A box (13-24); B box (58-68); tRNA-unrelated region (83-171); poly A tail (172-181). 99.4% similar to SINE2-2_Ipa.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||