Repbase Reports |
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| 2023, Volume 23, Issue 6 |
| June 16, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4113 |
SINE2-9c_Egr |
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SINE2-9c_Egr, a novel SINE retroposon from the Eucalyptus grandis genome. |
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Submitted: 05-Jun-2023 |
Accepted: 16-Jun-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-9c_Egr |
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Source: Eucalyptus grandis |
Organism: Eucalyptus grandis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SINE retroposons from plant genomes. |
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Journal: Repbase Reports 23(6), 4113-4113 (2023) |
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Abstract: Analyzed genome: Eucalyptus grandis v2.0 (Phytozome). Consensus of 18 seqs; mean 83.77% identity to consensus. Additional features: tRNA-related region (1-82); A box (14-25); B box (58-68); tRNA-unrelated region (83-231); poly A tail (232-244). First 139 nt similar to SINE2-2_Egr and SINE2-7_Egr. SINE2-9_Egr variants a to d share 79.00% similarity.
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Derived: |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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