Repbase Reports |
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| 2023, Volume 23, Issue 6 |
| June 16, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4201 |
SINE2-6a_Ciar |
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SINE2-6a_Ciar, a novel SINE retroposon from the Cicer arietinum genome. |
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Submitted: 05-Jun-2023 |
Accepted: 16-Jun-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-6a_Ciar |
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Source: Cicer arietinum |
Organism: Cicer arietinum |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SINE retroposons from plant genomes. |
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Journal: Repbase Reports 23(6), 4201-4201 (2023) |
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Abstract: Analyzed genome: Cicer arietinum v1.0 (Phytozome). Consensus of 50 seqs; mean 80.45% identity to consensus. Additional features: tRNA-related region (1-82); A box (14-25); B box (58-68); tRNA-unrelated region (83-189); poly A tail (190-196). SINE2-6_Ciar variants a and b share 71.80% similarity.
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Derived: |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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