Repbase Reports |
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| 2023, Volume 23, Issue 6 |
| June 16, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4245 |
SINE2-11b_Egr |
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SINE2-11b_Egr, a novel SINE retroposon from the Eucalyptus grandis genome. |
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Submitted: 05-Jun-2023 |
Accepted: 16-Jun-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-11b_Egr |
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Source: Eucalyptus grandis |
Organism: Eucalyptus grandis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SINE retroposons from plant genomes. |
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Journal: Repbase Reports 23(6), 4245-4245 (2023) |
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Abstract: Analyzed genome: Eucalyptus grandis v2.0 (Phytozome). Consensus of 25 seqs; mean 84.80% identity to consensus. Additional features: tRNA-related region (1-85); A box (14-25); B box (61-71); tRNA-unrelated region (86-207); poly A tail (208-220). First 160 nt similar to SINE2-1_Egr. SINE2-11_Egr variants a and b share 89.90% similarity.
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Derived: |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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