Repbase Reports |
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| 2023, Volume 23, Issue 5 |
| May 24, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3155 |
hAT-4_Ipa |
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hAT-4_Ipa, a novel transposon from the Ilex paraguariensis genome. |
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Submitted: 12-May-2023 |
Accepted: 24-May-2023 |
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Key Words: hAT; DNA transposon; Transposable Element; hAT-4_Ipa |
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Source: Ilex paraguariensis |
Organism: Ilex paraguariensis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex |
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Authors: Aguilera,P.M. and Grabiele,M. |
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Title: hAT transposons from the yerba mate genome. |
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Journal: Repbase Reports 23(5), 3155-3155 (2023) |
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Abstract: De novo search via RepeatModeler from GCA_905181385.1; CDS predicted via Fgenesh and protein annotated via InterProScan. Consensus of 25 seqs; mean 90.70% identity to consensus. Additional features: 22 nt TIRs 86.40% identity; 8 nt TSDs; between 204 and 205 there is a highly divergent region of ca. 1300-1700 nt, absent from the consensus sequence.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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