Repbase Reports |
|---|
| 2023, Volume 23, Issue 4 |
| April 27, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 2296 |
Helitron-N5b_Ipa |
|||
|---|---|---|---|
Helitron-N5b_Ipa, a novel transposon from the Ilex paraguariensis genome. |
|||
|
Submitted: 08-Apr-2023 |
Accepted: 27-Apr-2023 |
||
|
Key Words: Helitron; DNA transposon; Transposable Element; Nonautonomous; Helitron-N5b_Ipa |
|||
|
Source: Ilex paraguariensis |
Organism: Ilex paraguariensis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex |
|
| [] |
Authors: Aguilera,P.M. and Grabiele,M. |
||
|
Title: Helitron transposons from the yerba mate genome. |
|||
|
Journal: Repbase Reports 23(4), 2296-2296 (2023) |
|||
Abstract: De novo search via RepeatModeler from GCA_905181385.1. Consensus of 25 seqs; mean 92.44% identity to consensus. Additional features: Helitron-N5a_Ipa and Helitron-N5b_Ipa differentiate mainly by an indel of 180 nt; flanked by A and T nucleotides, respectively, embedded in min. 10 nt AT-rich regions.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||