Repbase Reports |
|---|
| 2023, Volume 23, Issue 2 |
| February 22, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 1307 |
SINE2-2_Mes |
|||
|---|---|---|---|
SINE2-2_Mes, a novel SINE retroposon from the mandioca genome. |
|||
|
Submitted: 01-Feb-2023 |
Accepted: 22-Feb-2023 |
||
|
Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-2_Mes |
|||
|
Source: Manihot esculenta |
Organism: Manihot esculenta |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot |
|
| [] |
Authors: Grabiele,M. and Aguilera,P.M. |
||
|
Title: Novel SINE retroposons from the mandioca genome. |
|||
|
Journal: Repbase Reports 23(2), 1307-1307 (2023) |
|||
Abstract: De novo TE library from GCF_001659605.2. Consensus of 3624 seqs >50 nt and poly A tail; mean 76.58% identity to consensus. Additional features: tRNA related region (1-81); A box (14-24); B box (57-67); tRNA-unrelated region (82-89); poly A tail (90-101); 337 copies in genes, 2 in CDS; no sequence similarity to other SINEs in Repbase.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||