Repbase Reports |
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| 2023, Volume 23, Issue 2 |
| February 22, 2023 |
| Copyright © 2001-2023 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 916 |
LINE1-2_Mes |
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LINE1-2_Mes, a novel non-LTR retrotransposon from the Manihot esculenta genome. |
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Submitted: 01-Feb-2023 |
Accepted: 22-Feb-2023 |
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Key Words: L1; Non-LTR Retrotransposon; Transposable Element; autonomous; LINE1-2_Mes |
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Source: Manihot esculenta |
Organism: Manihot esculenta |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot |
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Authors: Aguilera,P.M. and Grabiele,M. |
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Title: LINE retrotransposons from the mandioca genome. |
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Journal: Repbase Reports 23(2), 916-916 (2023) |
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Abstract: De novo TE library from GCF_001659605.2. Consensus of 25 seqs; mean 83.22% identity to consensus; some copies with visibles TSDs. Additional features: ORF (156-4247); poly A tail (4269-4277); 51 genomic copies >1000 nt, 14 in genes, 9 in CDS. LINE1-2_Mes and LINE1-N1_Mes share >90.00% similarity at their terminal regions in addition to an internal block.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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