Repbase Reports |
|---|
| 2022, Volume 22, Issue 6 |
| June 25, 2022 |
| Copyright © 2001-2022 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3377 |
Cassandra-1_SHS-I |
|||
|---|---|---|---|
LTR retrotransposon from the sugarcane genome - internal portion consensus. |
|||
|
Submitted: 18-Sep-2018 |
Accepted: 25-Jun-2022 |
||
|
Key Words: LTR Retrotransposon; Transposable Element; Nonautonomous; Cassandra-1_SHS; Cassandra; Cassandra-1_SHS-LTR; Cassandra-1_SHS-I |
|||
|
Source: Saccharum hybrid cultivar |
Organism: Saccharum hybrid cultivar |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex |
|
| [] |
Authors: Kojima,K.K. |
||
|
Title: Cassandra-type non-autonomous LTR retrotransposon families from the plant genomes. |
|||
|
Journal: Repbase Reports 22(6), 3377-3377 (2022) |
|||
Abstract: ~94% identical to consensus. 4 to 5-bp TSDs. It is a family of Cassandra, non-autonomous LTR retrotransposons having 5S rRNA-derived sequences.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||