Repbase Reports |
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| 2022, Volume 22, Issue 5 |
| May 24, 2022 |
| Copyright © 2001-2022 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3324 |
SINE2-5_Ipa |
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SINE2-5_Ipa, a novel SINE retroposon from the Ilex paraguariensis genome. |
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Submitted: 04-May-2022 |
Accepted: 24-May-2022 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-5_Ipa |
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Source: Ilex paraguariensis |
Organism: Ilex paraguariensis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SINE2-5_Ipa, a novel SINE retroposon from the Ilex paraguariensis genome. |
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Journal: Repbase Reports 22(5), 3324-3324 (2022) |
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Abstract: De novo TE library from GCA_905181385.1. Consensus of 170 seqs with both termini; mean 75.32% identity to consensus. Additional features: tRNA related region (1-81); A box (13-23); B box (57-67); tRNA- unrelated region (82-192); poly A tail (193-202); no sequence similarity to other SINEs in Repbase.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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