Repbase Reports |
|---|
| 2022, Volume 22, Issue 11 |
| November 26, 2022 |
| Copyright © 2001-2022 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 7285 |
Mariner-N1a_Cba |
|||
|---|---|---|---|
Mariner-N1a_Cba, a novel transposon from the Capsicum baccatum genome. |
|||
|
Submitted: 08-Nov-2022 |
Accepted: 26-Nov-2022 |
||
|
Key Words: Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; Mariner-N1a; Mariner-N1a_Cba |
|||
|
Source: Capsicum baccatum |
Organism: Capsicum baccatum |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum |
|
| [] |
Authors: Aguilera,P.M. and Grabiele,M. |
||
|
Title: Short transposons from the Capsicum baccatum genome. |
|||
|
Journal: Repbase Reports 22(11), 7285-7285 (2022) |
|||
Abstract: De novo TE library from GCA_002271885.2. Consensus of 25 seqs; mean 80.97% identity to consensus. Additional features: 31 nt TIRs 88.70% identity; TA TSDs; 84.85% similar to Mariner-N9B_Stu of Repbase. There exist two major subpopulations of Mariner-N1_Cba (a and b) which consensus share 87.50% sequence similarity.
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||