Repbase Reports |
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| 2021, Volume 21, Issue 7 |
| July 26, 2021 |
| Copyright © 2001-2021 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3983 |
LTR-1_Can-LTR |
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LTR-1_Can-LTR, a short LTR element from the chili pepper genome (Capsicum annuum). |
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Submitted: 14-Jul-2021 |
Accepted: 26-Jul-2021 |
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Key Words: LTR Retrotransposon; Transposable Element; Nonautonomous; LTR-1_Can-LTR |
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Source: Capsicum annuum |
Organism: Capsicum annuum |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum |
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Authors: Aguilera,P.M. and Grabiele,M. |
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Title: Short transposable elements from the chili pepper genome (Capsicum annuum). |
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Journal: Repbase Reports 21(7), 3983-3983 (2021) |
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Abstract: 1..82 /feature="LTR" 197..278 /feature="LTR" Analyzed genome of chili pepper: GCF_000710875.1 v1.0. This consensus is generated from 100 entire length sequences with mean 82% identity to consensus. This element has 5 nt TSDs and its consensus is 61.1% similar to LTR-16_OS-LTR.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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