Repbase Reports |
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| 2021, Volume 21, Issue 10 |
| October 24, 2021 |
| Copyright © 2001-2021 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 5421 |
hAT-1d_Ipa |
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hAT-1d_Ipa member of the family. |
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Submitted: 22-Sep-2021 |
Accepted: 24-Oct-2021 |
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Key Words: hAT; DNA transposon; Transposable Element; Nonautonomous; hAT-1d_Ipa |
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Source: Ilex paraguariensis |
Organism: Ilex paraguariensis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex |
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Authors: Aguilera,P.M. and Grabiele,M. |
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Title: hAT-1_Ipa, a family of hAT transposons from the yerba mate genome. |
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Journal: Repbase Reports 21(10), 5421-5421 (2021) |
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Abstract: De novo TE library from GCA_905181385.1. Consensus of 10 total genomic TIR to TIR length copies; mean 97.1% identity to consensus. Additional features: 8 nt TSDs (GTGGACAC); 12 nt TIRs; all copies are genomic duplications at scaffold CAJIXV010001937 and are nonautonomous with the expected ORF at position 1774 to 3902 of the consensus.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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