Repbase Reports |
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2014, Volume 14, Issue 7 |
July 31, 2014 |
Copyright © 2001-2016 - Genetic Information Research Institute |
ISSN# 1534-830X |
Page 1876 |
Nimb-1_LG |
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A family of Nimb non-LTR retrotransposons from Lottia gigantea - consensus sequence. |
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Submitted: 22-Mar-2011 |
Accepted: 31-Jul-2014 |
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Key Words: Nimb; Non-LTR Retrotransposon; Transposable Element; I group; Nimb-1_LG |
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Source: Lottia gigantea |
Organism: Lottia gigantea |
Taxonomy: Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia |
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[2] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: A recently active family of Nimb non-LTR retrotransposons from the owl limpet. |
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Journal: Repbase Reports 14(7), 1876-1876 (2014) |
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Abstract: The consensus sequence was derived from multiple alignment of ~100 copies that are less than 2% diverged from the consensus. The 3'-terminus is composed of the (TACC)n microsatellite. The ORF2-encoded protein, composed of the standard AP endonuclease, reverse transcriptase and RNase H domains, does not have the starting Met; therefore, its translation includes ribosomal frameshift.
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Derived: [2] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References:
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