Repbase Reports
2013, Volume 13, Issue 9
September 30, 2013
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2250

Tx1-1B_CPB

Non-LTR retrotransposon: consensus.

Submitted:
09-Nov-2012 		Accepted:
30-Sep-2013
Key Words:
Tx1; Non-LTR Retrotransposon; Transposable Element; Tx1-1_CPB; Tx1-1B_CPB
Source:
Chrysemys picta bellii 		Organism:
Chrysemys picta bellii 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Testudines; Cryptodira; Testudinoidea; Emydidae; Chrysemys; Chrysemys picta
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
Non-LTR retrotransposons from the western painted turtle.
Journal:
Repbase Reports 13(9), 2250-2250 (2013)
Abstract:
~94% identical to consensus. The 5' flanking sequence is ~90% identical to Gypsy-36_CPB-LTR, and so it is likely specifically inserted into a Gypsy LTR. The consensus is ~89% identical to that of Tx1-1_CPB.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Shaffer,H.B., Minx,P., Warren,D.E., Shedlock,A.M., Thomson,R.C., Valenzuela,N., Abramyan,J., Amemiya,C.T. et al.
    The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage.
    Genome Biol 14(3), - (2013)

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