Repbase Reports
2012, Volume 12, Issue 10
October 31, 2012
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2270

Keno-6_XT

A U2 snRNA gene-specific non-LTR Retrotransposon family from Xenopus tropicalis.

Submitted:
22-Mar-2011 		Accepted:
31-Oct-2012
Key Words:
Tx1; Non-LTR Retrotransposon; Transposable Element; Keno; Keno-6_XT
Source:
Xenopus (Silurana) tropicalis 		Organism:
Xenopus (Silurana) tropicalis 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
U2 snRNA gene-specific non-LTR retrotransposons from Xenopus tropicalis.
Journal:
Repbase Reports 12(10), 2270-2270 (2012)
Abstract:
This consensus is generated from 9 sequences with >92% identity. This family is specifically inserted into U2 small nuclear RNA genes at the same site. Related families have been reported as L1-53_XT, L1-54_XT, L1-55_XT, and L1-56_XT. It appears to generate no target site duplications. 5'-truncated.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hellsten,U., Harland,R.M., Gilchrist,M.J., Hendrix,D., Jurka,J., Kapitonov,V., Ovcharenko,I., Putnam,N.H. et al.
    The genome of the Western clawed frog Xenopus tropicalis.
    Science 328(5978), 633-636 (2010)

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