Repbase Reports
2011, Volume 11, Issue 8
August 31, 2011
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 2299

MuDRF-2_PGr

DNA transposon from Puccinia graminis - a consensus.

Submitted:
08-Jun-2011 		Accepted:
31-Aug-2011
Key Words:
MuDR; DNA transposon; Transposable Element; MuDRF-2_PGr
Source:
Puccinia graminis 		Organism:
Puccinia graminis 		Taxonomy:
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
MuDRF, a new group of DNA transposons belonging to the MuDR superfamily.
Journal:
Repbase Reports 11(8), 2299-2299 (2011)
Abstract:
MuDRF is a new group of DNA transposons belonging to the MuDR superfamily. MuDRF encodes a protein including GCM DNA-binding and DDE-transposase domains. The conserved DDE residues are D325, D395, and E527. 9 or 10-bp TSDs. ~160-bp TIRs. 5 copies in the genome with >96% identity. The exon-intron structure is predicted with Softberry FGENESH.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Duplessis,S., Cuomo,C.A., Lin,Y.C., Aerts,A., Tisserant,E., Veneault-Fourrey,C., Joly,D.L., Hacquard,S. et al.
    From the Cover: Obligate biotrophy features unraveled by the genomic analysis of rust fungi.
    Proc Natl Acad Sci U S A 108(22), 9166-9171 (2011)

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