Repbase Reports
2011, Volume 11, Issue 6
June 30, 2011
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 1829

Mariner-N3_PGr

DNA transposon from Puccinia graminis - a consensus.

Submitted:
08-Jun-2011 		Accepted:
30-Jun-2011
Key Words:
Mariner/Tc1; DNA transposon; Transposable Element; Nonautonomous; Mariner-N3_PGr
Source:
Puccinia graminis f. sp. tritici CRL 75-36-700-3 		Organism:
Puccinia graminis f. sp. tritici CRL 75-36-700-3 		Taxonomy:
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis
[2] Authors:
Kojima,K.K. and Jurka,J.
Title:
DNA transposons from Puccinia graminis.
Journal:
Repbase Reports 11(6), 1829-1829 (2011)
Abstract:
~97% identical to consensus. ~270-bp TIRs. The alignment of this family is ended with 6-bp palindrome sequences (TGTACA) at both sides. Considering the similarity to Mariner elements (Mariner-3_PGr and Mariner-4_PGr), the insertion of this family would generate TA TSDs and be ended with CA and TG.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Duplessis,S., Cuomo,C.A., Lin,Y.C., Aerts,A., Tisserant,E., Veneault-Fourrey,C., Joly,D.L., Hacquard,S. et al.
    From the Cover: Obligate biotrophy features unraveled by the genomic analysis of rust fungi.
    Proc Natl Acad Sci U S A 108(22), 9166-9171 (2011)

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