Repbase Reports |
|---|
| 2010, Volume 10, Issue 8 |
| August 31, 2010 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 1098 |
Gypsy-18A_SB-I |
|||
|---|---|---|---|
LTR retrotransposon from sorghum: internal portion. |
|||
|
Submitted: 15-Jul-2010 |
Accepted: 31-Aug-2010 |
||
|
Key Words: Gypsy; LTR Retrotransposon; Transposable Element; PMD; Gypsy-18A_SB-I |
|||
|
Source: Sorghum bicolor |
Organism: Sorghum bicolor |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Sorghum |
|
| [1] |
Authors: Bao,W. and Jurka,J. |
||
|
Title: LTR retrotransposons from sorghum. |
|||
|
Journal: Repbase Reports 10(8), 1098-1098 (2010) |
|||
Abstract: Compare to Gypsy-18_SB-I, Gypsy-18A_SB-I contains extra ~5100-bp portion near to the 3'-end, encoding two extra proteins on the complementary strand, whose relatives are also found in other Gypsy LTR retrotransposons found in other plants. Gypsy-18A_SB-I_3p contains plant mobile domain (PMD) domain, which is also found associated with some MuDR transposases.
|
|||
|
Derived: Positions 348054 365080 Accession No ABXC01001026.1 EMBL/GenBank/DDBJ |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||