Repbase Reports |
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| 2010, Volume 10, Issue 3 |
| March 31, 2010 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 243 |
Nimb-1_DPu |
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A family of Nimb non-LTR retrotransposons from Daphnia - consensus sequence. |
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Submitted: 26-Feb-2010 |
Accepted: 31-Mar-2010 |
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Key Words: Nimb; Non-LTR Retrotransposon; Transposable Element; I group; Nimb-1_DPu |
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Source: Daphnia pulex |
Organism: Daphnia pulex |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: A recently active family of target-site specific Nimb non-LTR retrotransposons from daphnia. |
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Journal: Repbase Reports 10(3), 243-243 (2010) |
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Abstract: The consensus sequence was derived from multiple alignment of several copies less than 2% diverged from each other. The 3' terminus is composed of the (AACC)n microsatellite. Usually, Nimb-1_DPu elements are inserted at the same target site in the same unclassified repetetive element and are flanked by 10-16-bp target site duplications (TSD): 5'-AAAAAATCGTATAAAAGGAGAGAGAAAAGGC[TSD]Nimb-1_DPu[TSD]-3.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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