Repbase Reports |
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| 2010, Volume 10, Issue 2 |
| February 28, 2010 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 139 |
RTEX-1_VC |
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RTEX family of non-LTR retrotransposons - a consensus sequence. |
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Submitted: 20-Jan-2010 |
Accepted: 28-Feb-2010 |
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Key Words: RTEX; Non-LTR Retrotransposon; Transposable Element; RTEX-1_VC |
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Source: Volvox carteri |
Organism: Volvox carteri |
Taxonomy: Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: First examples of RTEX non-LTR retrotransposons found outside metazoans. |
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Journal: Repbase Reports 10(2), 139-139 (2010) |
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Abstract: RTEX-1_VC belongs to the RTEX clade of non-LTR retrotransposons. The consensus sequence is less than 1% divergent from several copies of RTEX-1_VC. In addition to RTEX-1_VC, the volvox genome contains other families of RTEX non-LTR retrotransposons. The 3' terminus is made of the (ATCC)n microsatellite. This sequence was derived from sequence data produced by the US Department of Energy Joint Genome Institute http://www.jgi.doe.gov/ in collaboration with the user community.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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