Repbase Reports |
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| 2010, Volume 10, Issue 11 |
| November 30, 2010 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 1903 |
hAT5-N1_DR |
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hAT5-type DNA transposon - consensus. |
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Submitted: 05-Mar-2010 |
Accepted: 30-Nov-2010 |
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Key Words: hAT; DNA transposon; Transposable Element; Nonautonomous; hAT5-N1_DR |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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| [2] |
Authors: Kojima,K.K. and Jurka,J. |
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Title: hAT5-type DNA transposons from teleost fish. |
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Journal: Repbase Reports 10(11), 1903-1903 (2010) |
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Abstract: >96% identical to consensus. 5-bp TSDs. Both termini are similar to DNA-5-3_DR, DNA-5-7_DR, and DNA-5-8_DR with >70% identity. This transposon encodes a CCHH zinc-finger protein similar to the N-terminal portion of hAT transposase. These characteristics show that this is a nonautonomous member of hAT5 group of hAT-type DNA transposon, represented by hAT5-1_NV from Nematostella vectensis [1]. This sequence was derived from sequence data generated by the Danio rerio Sequencing Group at the Sanger Institute.
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Derived: [2] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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