Repbase Reports |
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| 2009, Volume 9, Issue 7 |
| July 31, 2009 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 1537 |
I-1_CI |
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A family of I non-LTR retrotransposons - a consensus sequence. |
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Submitted: 24-Jul-2009 |
Accepted: 31-Jul-2009 |
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Key Words: Nimb; Non-LTR Retrotransposon; Transposable Element; I superfamily; I-1_CI |
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Source: Ciona intestinalis |
Organism: Ciona intestinalis |
Taxonomy: Eukaryota; Metazoa; Chordata; Urochordata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Nimb - a novel clade of animal non-LTR retrotransposons. |
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Journal: Repbase Reports 9(7), 1537-1537 (2009) |
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Abstract: Nimb is novel clade of I-like non-LTR retrotransposons. It includes families of retrotransposons present in fish, molluscs, sea squirts, sea urchins and insects: I-1_DR, I-3_DR, I-5_DR, nimbus, I-3_AC, I-4_AC, I-1_CI, I-1_SP, I-1_AA, I-1_BM. I-1_CI is a family of tunicate Nimb non-LTR retrotransposon. The consensus sequence was derived from multiple alignment of several copies ~99% identical to each other. The 3' terminus is composed of the (TAA)n microsatellite.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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