Repbase Reports |
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| 2009, Volume 9, Issue 7 |
| July 31, 2009 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 1529 |
I-1_AC |
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A family of I non-LTR retrotransposons from a sea slug - consensus sequence. |
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Submitted: 28-Jul-2009 |
Accepted: 31-Jul-2009 |
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Key Words: Ingi; Non-LTR Retrotransposon; Transposable Element; I group; I-1_AC |
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Source: Aplysia californica |
Organism: Aplysia californica |
Taxonomy: Eukaryota; Metazoa; Mollusca; Gastropoda; Orthogastropoda; Apogastropoda; Heterobranchia; Euthyneura; Opisthobranchia; Anaspidea; Aplysioidea; Aplysiidae; Aplysia |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: New families of I non-LTR retrotransposons from animals. |
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Journal: Repbase Reports 9(7), 1529-1529 (2009) |
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Abstract: I-1_AC can be considered as a member of the Ingi clade in the I group. The consensus sequence was derived from multiple alignment of several copies ~97% identical to each other. The 3' terminus is composed of the (GA)n microsatellite. Target site duplications are not present.The consensus does not contain ORF1. The 5' terminus is precisely defined by 4 different copies of I-1_AC. Therefore, it is unlikely that the consensus is incomplete due to 5' truncations.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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