Repbase Reports |
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| 2009, Volume 9, Issue 7 |
| July 31, 2009 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 1332 |
Crack-1_CP |
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Culex pipiens Crack non-LTR retrotransposon. |
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Submitted: 22-Jul-2009 |
Accepted: 31-Jul-2009 |
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Key Words: Crack; Non-LTR Retrotransposon; Transposable Element; Crack-1_CP |
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Source: Culex pipiens |
Organism: Culex pipiens |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: A family of Crack retrotransposons from Culex pipiens. |
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Journal: Repbase Reports 9(7), 1332-1332 (2009) |
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Abstract: Crack-1_CP is a non-LTR retrotransposon that belongs to the Crack clade, a sister clade of L2 and Daphne. Like in other Crack retrotransposons, the ORF1 protein in Crack-1_CP contains a domain similar to the central domain conserved in vertebrate L1 ORF1 protein. In Crack-1_CP-Crack3_CP retrotransposons, the ORF1 protein contains also in its N-terminal part the PHD finger (C4HC3). The Crack-1_CP consensus sequence was derived from multiple alignment of 5 copies of Crack-1_CP that are 99% identical to each other.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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