Repbase Reports
2008, Volume 8, Issue 8
August 31, 2008
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 788

EnSpm-1_BF

Amphioxus EnSpm-1_BF autonomous DNA transposon - consensus.

Submitted:
04-Aug-2008 		Accepted:
31-Aug-2008
Key Words:
EnSpm; DNA transposon; Transposable Element; EnSpm-1_BF
Source:
Branchiostoma floridae 		Organism:
Branchiostoma floridae 		Taxonomy:
Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma
[2] Authors:
Kapitonov,V. and Jurka,J.
Title:
EnSpm-1_BF - a family of autonomous DNA transposons from the amphioxus genome.
Journal:
Repbase Reports 8(8), 788-788 (2008)
Abstract:
This autonomous transposon shares common termini with the non-autonomous EnSpm-N1_BF. It contains 28-bp TIRs (6 mismatches), is characterized by 3-bp TSDs and codes for the 737-aa En/Spm transposase.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Putnam,N.H., Butts,T., Ferrier,D.E., Furlong,R.F., Hellsten,U., Kawashima,T., Robinson-Rechavi,M., Shoguchi,E., Terry,A., Yu,J.K., Benito-Gutiérrez,E.L., Dubchak,I., Garcia-Fernàndez,J., Gibson-Brown,J.J., Grigoriev,I.V., Horton,A.C., De Jong,P.J., Jurka,J., Kapitonov,V.V., Kohara,Y., Kuroki,Y., Lindquist,E., Lucas,S., Osoegawa,K., Pennacchio,L.A., Salamov,A.A., Satou,Y., Sauka-Spengler,T., Schmutz,J., Shin-I,T., Toyoda,A., Bronner-Fraser,M., Fujiyama,A., Holland,L.Z., Holland,P.W., Satoh,N. and Rokhsar,D.S.
    The amphioxus genome and the evolution of the chordate karyotype.
    Nature 453(7198), 1064-1071 (2008)

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