Repbase Reports |
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| 2008, Volume 8, Issue 2 |
| February 29, 2008 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 45 |
Chapaev3-1_DW |
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Chapaev3-1_DW is an autonomous DNA transposon - imperfect consensus. |
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Submitted: 29-Feb-2008 |
Accepted: 29-FEB-2008 |
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Key Words: Chapaev; DNA transposon; Transposable Element; Chapaev3; Chapaev3-1_DW |
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Source: Drosophila willistoni |
Organism: Drosophila willistoni |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Chapaev3, a distinctive group of animal Chapaev transposons. |
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Journal: Repbase Reports 8(2), 45-45 (2008) |
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Abstract: Chapaev3-1_DW belongs to the Chapaev3 group of the Chapaev superfamily of DNA transposons (see comments on Chapaev3-1_PM). Chapaev3-1_DW is a realtively young family of fruit fly Chapaev3 transposons: genomic copies of Chapae3-1_DW elements are ~95% identical to their consensus sequence, which was derived from multiple alignment of a few Chapaev3-1_DW elements damaged by multiple deletions. The transposase-encoding region is corrupted by mutations accumulated in genomic copies. Chapaev3-1_DW contains 12-bp TIRs and ~550-bp subterminal inverted repeats. The genomoe contains numerous non-autonomous derivates of Chapaev3-1_DW.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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