Repbase Reports |
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| 2008, Volume 8, Issue 1 |
| January 31, 2008 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 5 |
Transib-5_HM |
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Autonomous Transib DNA transposon -a consensus sequence. |
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Submitted: 30-Jan-2008 |
Accepted: 31-Jan-2008 |
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Key Words: Transib; DNA transposon; Transposable Element; Transib-5_HM |
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Source: Hydra magnipapillata |
Organism: Hydra magnipapillata |
Taxonomy: Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroida; Anthomedusae; Hydridae; Hydra |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Autonomous Transib transposons from the hydra genome. |
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Journal: Repbase Reports 8(1), 5-5 (2008) |
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Abstract: Transib-5_HM is a young family of autonomous Transib DNA transposons that were active in the hydra genome just a few million years ago (they are ~1% divergent from their consensus sequence). The consensus sequence was obtained based on a multiple alignment of ~20 copies; it codes for a 663-aa Transib transposase. Like other Transib transposons, Transib-5_HM is characterized by 5-bp target site duplications and short terminal inverted repeats.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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