Repbase Reports |
|---|
| 2007, Volume 7, Issue 7 |
| July 31, 2007 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 661 |
Penelope1_Dw |
|||
|---|---|---|---|
Penelope1 retrotransposon from D. willistoni - a consensus sequence. |
|||
|
Submitted: 25-Jul-2007 |
Accepted: 31-Jul-2007 |
||
|
Key Words: Penelope; Non-LTR Retrotransposon; Transposable Element; retrotransposon; Penelope-like element; reverse transcriptase; GIY-YIG endonuclease; Penelope1_Dw |
|||
|
Source: Drosophila willistoni |
Organism: Drosophila willistoni |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila |
|
| [1] |
Authors: Arkhipova,I.R. |
||
|
Title: Penelope retrotransposons from Drosophila willistoni. |
|||
|
Journal: Repbase Reports 7(7), 661-661 (2007) |
|||
Abstract: Penelope1_Dw from Drosophila willistoni is 68% identical to Penelope from D. virilis (U49102), and 70% identical to Penelope2_Dw, another D. wllistoni Penelope element. There are about 60 copies of Penelope1_Dw in the sequenced part of the D. willistoni genome, most of which differ from the consensus by 1-5% but can differ as much as 10-15%. Most of the copies are 5'-truncated, and only one appears to be fully intact (AAQB01006297) and is arranged in a characteristic partial-tandem, forming "pseudo-LTRs".
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||