Repbase Reports |
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| 2007, Volume 7, Issue 2 |
| February 28, 2007 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 115 |
Kolobok-1_TV |
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A family of autonomous Kolobok transposons - a consensus. |
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Submitted: 27-Feb-2007 |
Accepted: 28-Feb-2007 |
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Key Words: Kolobok; DNA transposon; Interspersed Repeat; Kolobok-1_TV |
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Source: Trichomonas vaginalis |
Organism: Trichomonas vaginalis |
Taxonomy: Eukaryota; Parabasalidea; Trichomonada; Trichomonadida; Trichomonadidae; Trichomonadinae; Trichomonas |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Kolobok, a novel superfamily of eukaryotic DNA transposons. |
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Journal: Repbase Reports 7(2), 115-115 (2007) |
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Abstract: Kolobok-1_TV is a consensus sequence of a family of autonomous Kolobok transposons that were active in the T. vaginalis genome in a last few million years. The Kolobok-1_TV transposon is characterized by 15-bp imperfect terminal inverted repeats, TTAA target site duplications, and it encodes the 401-aa Kolobok-1_TV1p transposase. Kolobok transposons, including numerous families of non-autonomous elements, constitute >2% of the T. vaginalis genome. See also comments in Kolobok-1_XT.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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