Repbase Reports |
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| 2006, Volume 6, Issue 5 |
| May 31, 2006 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 259 |
NonLTR-5_CR |
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It is a putative nonautonomous non-LTR retrotransposon - a consensus sequence. |
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Submitted: 31-May-2006 |
Accepted: 31-May-2006 |
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Key Words: Non-LTR Retrotransposon; Interspersed Repeat; Non-autonomous; L1-3_CR; NonLTR-5_CR |
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Source: Chlamydomonas reinhardtii |
Organism: Chlamydomonas reinhardtii |
Taxonomy: Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: NonLTR-5_CR, a putative long nonautonomous non-LTR retrotransposons in the green algae genome. |
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Journal: Repbase Reports 6(5), 259-259 (2006) |
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Abstract: This transposable element is a putative non-LTR retrotransposon, characterized by ~15-bp target site duplications and frequent truncation of 5' terminal portions. Despite its length this element does not encode recognizable reverse transcriptase/endonuclease. Most likely it is a nonautonomous non-LTR retrotransposon. Although NonLTR-5_CR contains long two long ORFs in different frames, they seem to be meaningless. NonLTR-5_CR (pos. 3468-5270) is 69% identical to L1-3_CR (pos. 456-1990).
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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