Repbase Reports |
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| 2006, Volume 6, Issue 3 |
| March 31, 2006 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 162 |
P-1_CR |
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P-1_CR is a family of P autonomous DNA transposons - a consensus sequence. |
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Submitted: 29-Mar-2006 |
Accepted: 31-Mar-2006 |
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Key Words: P; DNA transposon; Interspersed Repeat; P-1_CR |
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Source: Chlamydomonas reinhardtii |
Organism: Chlamydomonas reinhardtii |
Taxonomy: Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: P-1_CR, a family of P autonomous DNA transposons in the Chlamydomonas reinhardtii genome. |
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Journal: Repbase Reports 6(3), 162-162 (2006) |
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Abstract: This is a first example of P transposons in viridiplantae. P-1_CR encodes a 1822-aa TPase composed of the DDE domain conserved in all P transposases (aa pos. 537-1121) and PHD zinc finger (pos. 1670-1715). The P-1CR TPase is predicted to be encoded by 15 exons (based on FGENESH and comparison with other P transposases ). P-1_CR is characterized by 8-bp target site duplications and 146-bp TIRs. The genome is populated by several families of nonautonomous transposons derived from P-1_CR (DNA-8-1_CR, DNA-8-2_CR, DNA-8-3_CR).
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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