Repbase Reports |
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| 2006, Volume 6, Issue 11 |
| November 30, 2006 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 562 |
Harbinger-2_XT |
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A family of autonomous Harbinger transposons - a consensus. |
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Submitted: 30-Nov-2006 |
Accepted: 30-Nov-2006 |
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Key Words: Harbinger; DNA transposon; Interspersed Repeat; Harbinger-2_XT |
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Source: Xenopus tropicalis |
Organism: Xenopus tropicalis |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Harbinger-2_XT, a family of autonomous Harbinger DNA transposons from frog. |
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Journal: Repbase Reports 6(11), 562-562 (2006) |
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Abstract: It encodes the 377-aa Harbinger-2_XT1p transposase and 327-aa Harbinger-2_XT2p myb-like DNA binding protein. This transposon is characterized by the TWA target-site duplications. It harbors copies of several other transposons, which are masked by Ns: CR1-L2-1_XT (pos. 482-644), hAT-N1_XT (pos. 2665-2970), and XBR_XT (at pos. 10871-11335). While the first two seem to be normal TEs inserted into an ancestral sequence of Harbinger-2_XT, XBR_XT element belongs to a very old family of TEs.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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