Repbase Reports |
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| 2005, Volume 5, Issue 6 |
| June 30, 2005 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 163 |
SINE2-5_SP |
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A family of SINE retrotransposons - a consensus sequence. |
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Submitted: 30-Jun-2005 |
Accepted: 30-Jun-2005 |
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Key Words: SINE2; SINE; Interspersed Repeat; Non-autonomous; non-LTR retrotransposon; SINE2-2_SP; SINE2-4_SP; SINE2-5_SP |
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Source: Strongylocentrotus purpuratus |
Organism: Strongylocentrotus purpuratus |
Taxonomy: Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: SINE2-5_SP, a family of SINE2 retrotransposons in the sea urchin genome. |
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Journal: Repbase Reports 5(6), 163-163 (2005) |
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Abstract: The genome harbors ~1000 copies of SINE2-5_SP elements that are ~85% identical to the SINE2-5_SP consensus sequence. The SINE2-5_SP looks as a product of recombination between SINE2-4_SP and SINE2-2_SP. Its 146-bp 5'-terminal portion is ~80% identical to the 5' terminal parts of SINE2-4 elements. The remaining portion of SINE2-5_SP is 83% identical to the 3' terminal portion of SINE2-2_SP.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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