Repbase Reports |
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| 2005, Volume 5, Issue 5 |
| May 31, 2005 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 118 |
Gypsy-28-I_DR |
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An internal portion of the Gypsy-28_DR LTR retrotransposon - a consensus sequence. |
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Submitted: 31-May-2005 |
Accepted: 31-May-2005 |
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Key Words: Gypsy; LTR Retrotransposon; Interspersed Repeat; Gypsy superfamily; endogenous retrovirus; gag; integrase; reverse transcriptase; Gypsy-28_DR; Gypsy-28-LTR_DR; Gypsy-28-I_DR |
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Source: Danio rerio |
Organism: Danio rerio |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Gypsy-28_DR, a family of LTR retrotransposons from zebrafish. |
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Journal: Repbase Reports 5(5), 118-118 (2005) |
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Abstract: Gypsy-28-I_DR is an internal portion of the Gypsy-28_DR LTR retrotransposon that belongs to the Gypsy superfamily. Its long terminal repeat is deposited in Repbase as Gypsy-28-LTR_DR. Gypsy-28_DR is characterized by varable 5-6-bp target site duplications. The internal portion encodes one polyprotein: the 1364-aa Gypsy-28_DR1p (pos. 18-4109) composed of the gag, protease, reverse transcriptase, and integrase domains.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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