Repbase Reports |
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| 2005, Volume 5, Issue 4 |
| April 30, 2005 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 71 |
CR1-13_SP |
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CR1-13_SP is a non-LTR retrotransposon - a consensus sequence. |
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Submitted: 30-Apr-2005 |
Accepted: 30-Apr-2005 |
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Key Words: CR1; Non-LTR Retrotransposon; Interspersed Repeat; endonuclease; reverse transcriptase; CR1-13_SP |
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Source: Strongylocentrotus purpuratus |
Organism: Strongylocentrotus purpuratus |
Taxonomy: Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: CR1-13_SP, a family of non-LTR retrotransposons from the sea urchin genome. |
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Journal: Repbase Reports 5(4), 71-71 (2005) |
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Abstract: CR1-13_SP is a non-LTR retrotransposon that belongs to the CR1 clade. Copies of CR1-13_SP are ~4% divergent from the consensus sequence. The consensus sequence is incomplete due to 5' truncations of CR1-13_SP elements upon their retrotranspositions. Active CR1-13_SP encoded a protein (pos. 800-3700) composed of the endonuclease and reverse transcriptase domains. Due to the small number of copies, the coding region is not well reconstructed (several stop codons). The 3' terminus of CR1-13_SP is composed of the (TTTGAA) microsatellite.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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