Repbase Reports |
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| 2005, Volume 5, Issue 2 |
| February 28, 2005 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 37 |
ENSPM2_OS |
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Rice En/Spm type autonomous DNA transposon, consensus. |
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Submitted: 00-Feb-2005 |
Accepted: 28-Feb-2005 |
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Key Words: autonomous DNA transposon; TIR; transposase; En/Spm superfamily; ENSPM2_OS |
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Source: Oryza sativa |
Organism: Oryza sativa |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza |
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Authors: Gentles,A. and Jurka,J. |
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Title: Rice DNA transposon ENSPM2_OS. |
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Journal: Repbase Reports 5:(2) p.37 (2005) |
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Abstract: There are 8 full-length copies of this DNA transposon in the rice genome with >93% similarity to the consensus. Generates 3 bp target site duplications; and has 29 bp imperfect TIRs. The sequence has a 1081 codon ORF including a Tnp2 type transposase domain similar to that found in other En/Spm transposons. This putative protein is 86% similar to the related ORF of ENSPM3_OS; but the DNA sequences are only 70% similar.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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