Repbase Reports |
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| 2005, Volume 5, Issue 11 |
| November 30, 2005 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 394 |
Helitron-N1_SP |
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Nonautonomous Helitron transposon - a consensus sequence. |
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Submitted: 30-Nov-2005 |
Accepted: 30-Nov-2005 |
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Key Words: Helitron; DNA transposon; Interspersed Repeat; Non-autonomous; Helitron-N1_SP |
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Source: Strongylocentrotus purpuratus |
Organism: Strongylocentrotus purpuratus |
Taxonomy: Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Helitron-N1_SP, a family of nonautonomous Helitrons in the sea urchin genome. |
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Journal: Repbase Reports 5(11), 394-394 (2005) |
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Abstract: The genome contains several thousand copies of Helitron-N1_SP. Target site: TTT-TT, where "-" is an insertion position; no target site duplications. Terminal palindromes: 5'-TTATGCCTCCGTTACGAAGTAGCCGGAGGCATTATGTTTT... |-------> <-------| ...TGCTCTATGACGGAGGCATCATTTTCGACTGCGCGCAGTCGAATTCCATCTAG-3' <--------||--------> Helitrons (Helitron-N1_SP, Helitron-N2_SP, Helitron-N3_SP) constitute ~1% of the sea urchin genome.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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