Repbase Reports
2005, Volume 5, Issue 10
October 31, 2005
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 302

CRMA1_I

Gypsy-type LTR retrotransposon from O. sativa (internal portion).

Submitted:
11-Oct-2005 		Accepted:
31-Oct-2005
Key Words:
Gypsy; LTR Retrotransposon; Interspersed Repeat; CRMA1_LTR
Source:
Oryza sativa (japonica cultivar-group) 		Organism:
Oryza sativa (japonica cultivar-group) 		Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Ehrhartoideae; Oryzeae; Oryza; Oryza sativa
[2] Authors:
Jurka,J.
Title:
CRMA1: A new Gypsy-type LTR retrotransposon from rice.
Journal:
Repbase Reports 5(10), 302-302 (2005)
Abstract:
LTRs are 96% identical. Similarity of the protein-coding region to Gypsy-Ty3 was observed in ref. 1. Part of the putative protein is outside the gypsy coordinates reported here.
Derived:
Positions 45400 39326 Accession No AC146948 EMBL/GenBank/DDBJ
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Buell,C., Yuan,Q., Ouyang,S., Liu,J., Wang,A., Maiti,R., Lin,H., Zhu,W., Hamilton,J., Jones,K., Tallon,L., Feldblyum,T., Tsitrin,T., Bera,J., Kim,M., Jin,S., Fadrosh,D., Vuong,H., Overton II,L., Reardon,M., Weaver,B., Johri,S., Lewis,M., Utterback,T., Van Aken,S., Wortman,J., Haas,B., Koo,H., Zismann,V., Hsiao,J., Iobst,S., de Vazeilles,A., White,O., Salzberg,S. and Fraser,C.
    None.
    Unpublished (2005)

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