Repbase Reports |
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| 2003, Volume 3, Issue 6 |
| June 30, 2003 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 115 |
MarinerN1_CI |
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Nonautonomous DNA transposon MarinerN1_CI - a consensus. |
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Submitted: 30-Jun-2003 |
Accepted: 30-Jun-2003 |
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Key Words: Nonautonomous DNA transposon, mariner/Tc1 superfamily; TA target site duplication; Cimi-1; MarinerN1_CI |
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Source: consensus |
Organism: Ciona intestinalis |
Taxonomy: Eukaryota; Metazoa; Chordata; Urochordata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona |
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| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
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Title: MarinerN1_CI, a family of nonautonomous mariner/Tc1 DNA transposons from the sea squirt Ciona intestinalis |
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Journal: Repbase Reports 3:(6) p. 115 (2003) |
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Abstract: MarinerN1_CI is a family of nonautonomous elements related to the mariner/Tc1 superfamily. There are ~100 MarinerN1_CI elements in the C. intestinalis genome. The consensus sequence was reconstructed from 70 copies, which are 94% identical to it. MarinerN1_CI shares similar 48-bp and 33-bp 5' and 3' termini with Cimi-1. MarinerN1_CI has 28-bp terminal inverted repeats (3 mismatches). The compact ~120-Mb C. intestinalis genome is a heaven for mariner/Tc1 DNA transposons, they constitute over 5% of the whole genome.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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