Repbase Reports |
|---|
| 2003, Volume 3, Issue 5 |
| May 31, 2003 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 97 |
PegasusA |
|||
|---|---|---|---|
PegasusA is a hAT-like autonomous DNA transposon - a consensus sequence. |
|||
|
Submitted: 31-May-2003 |
Accepted: 31-May-2003 |
||
|
Key Words: Autonomous DNA transposon; hAT superfamily; 8-bp TSD; transposase; MITE; PEGASUS; PegasusA |
|||
|
Source: consensus |
Organism: Anopheles gambiae str. PEST |
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Anopheles |
|
| [2] |
Authors: Kapitonov,V.V. and Jurka,J. |
||
|
Title: PegasusA: a family of autonomous hAT-like DNA transposons from African malaria mosquito. |
|||
|
Journal: Repbase Reports 3:(5) p. 97 (2003) |
|||
Abstract: PegasusA is a family of autonomous DNA transposons that belongs to the hAT superfamily. The PegasusA consensus sequence was built from 4 copies ~3% diverged from it. PegasusA encodes the 499-aa PegasusAp hAT-like transposase (exons 312-600, 1347-2053 and 2317-2820). PegasusAp: MSKTSGEKRKLREIIAEGCVGFENGHFVCTIDEVNGCKYRQKNEKYEPGNFIRHIRSMHP DLAKSRGLLQEDGEVPIKKRKVSKVPVAIDRQKLLEGRPQENCSLPNHYLDLTEAIEKEF YQYITLVRCAVHTMQLSVVDVVKTFDGEIRKCTAVSNNCRKIMYKTVFNNESLPPLYSKT RWGGIFEMLNHFFKQEDFFNELGQQHSELGEIYYINEKVFPYLNISFFSDLTEQWDFIKE YVVAFVPVYISTKAMQAKHTSLNDFYLSWMKTILKVGSIPGNRFVEPLTKALKNRLKNLK ESIVFKAALLLDPRFNYLNSKFFNQEEKEEIRSFIISTSERIHLCKAKVQPSSSSSPSNA PNGTLNSSSDFDLYFTELYGGSLPEQNAEEIQTSANKILRQLISLDAEAHQNSHFDVWNF WLMRKSTHPELYEVATLLLSVPSNQVSVERAFSALGLVLSDKRTRMNDDTLENILLIKLN QPLLEKILPDLYEWNKEDI Nonautonomous derivate of PegasusA was described as PEGASUS [1]. PegasusA is flanked by imperfect 16-bp terminal inverted repeats (4 mismatches).
|
|||
|
Derived: [2] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
References:
|
|||