Repbase Reports |
|---|
| 2003, Volume 3, Issue 12 |
| December 31, 2003 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 213 |
Mariner-5_AN |
|||
|---|---|---|---|
DNA transposon. Mariner superfamily. Tc1 clade - a consensus sequence. |
|||
|
Submitted: 31-Dec-2003 |
Accepted: 31-Dec-2003 |
||
|
Key Words: DNA transposon; Mariner superfamily; Tc1 clade; Mariner-5_AN |
|||
|
Source: consensus |
Organism: Emericella nidulans (Aspergillus nidulans) |
Taxonomy: cellular organisms; Eukaryota; Fungi/Metazoa group; Fungi; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiales; Trichocomaceae; Emericella |
|
| [1] |
Authors: Kapitonov,V.V. and Jurka,J. |
||
|
Title: Mariner-5_AN, a family of nonautonomous DNA transposons in the Aspergillus nidulans genome. |
|||
|
Journal: Repbase Reports 3:(12) p. 213 (2003) |
|||
Abstract: DNA transposon. Mariner superfamily. Tc1 clade. TA target site duplication. 40-bp TIRs. The 350-aa Mariner-5_ANp transposase is encoded by a single ORF (pos. 159-1208). The transposase is closest to the Impala transposase found in Fusarium oxysporum (GenBank AAB33090, 49% identity). Mariner-5_ANp: MGRRGKELTPDIRARLCELKAIGWTFAMIHQRYPHIPYSTIRNTIKRENDRKDQKSSPQSGRPKKISLEE QRHLLALIEQDHHIKMRKLSEAVQSSPSVRTVQRLFHTLHIQKWKQCERPEITPENAEKQLRWAETYAGY TAEDFNRVIWSDECLVERGAGIRRIYTFRSPRQQIIKRDVHAIRCGKGVKQMFWAAFGFNRRTGLLPLDG DPDAARGGVTAWVIRGVYKSFLPDILGPGDIFMHDGASVHRAYIVQQLLEDMGVEVMVWPPYSPDLNPIK NLWALMKAKIYELHPELERAPDTEETLQLLIKAAIEAWHAIDERVLQNLCHTMPHRVQAILRADGWYTSY
|
|||
|
Derived: [1] (Consensus) |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||